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Journal Articles

Necci, M. Piovesan, D. Tosatto, S.C. (2021). Critical assessment of protein intrinsic disorder prediction. Nature methods, Vol.18 (5), pp. 472-481.  show abstract

Kruse, T. Benz, C. Garvanska, D.H. Lindqvist, R. Mihalic, F. Coscia, F. Inturi, R. Sayadi, A. Simonetti, L. Nilsson, E. Ali, M. Kliche, J. Moliner Morro, A. Mund, A. Andersson, E. McInerney, G. Mann, M. Jemth, P. Davey, N.E. Överby, A.K. Nilsson, J. Ivarsson, Y. (2021). Large scale discovery of coronavirus-host factor protein interaction motifs reveals SARS-CoV-2 specific mechanisms and vulnerabilities. Nature communications, Vol.12 (1).  show abstract

Kumar, M. Kumar, M. Gouw, M. Michael, S. Sámano-Sánchez, H. Pancsa, R. Glavina, J. Diakogianni, A. Valverde, J.A. Bukirova, D. Čalyševa, J. Palopoli, N. Davey, N.E. Chemes, L.B. Gibson, T.J. (2020). ELM-the eukaryotic linear motif resource in 2020. Nucleic acids research, Vol.48 (D1), pp. D296-D306.  show abstract

Palopoli, N. Iserte, J.A. Chemes, L.B. Marino-Buslje, C. Parisi, G. Gibson, T.J. Davey, N.E. (2020). The articles ELM resource: simplifying access to protein linear motif literature by annotation, text-mining and classification. Database : the journal of biological databases and curation, Vol.2020.  show abstract

Balasuriya, N. Davey, N.E. Johnson, J.L. Liu, H. Biggar, K.K. Cantley, L.C. Li, S.S. O'Donoghue, P. (2020). Phosphorylation-dependent substrate selectivity of protein kinase B (AKT1). Journal of biological chemistry, Vol.295 (24), pp. 8120-8134.

Wigington, C.P. Roy, J. Damle, N.P. Yadav, V.K. Blikstad, C. Resch, E. Wong, C.J. Mackay, D.R. Wang, J.T. Krystkowiak, I. Bradburn, D.A. Tsekitsidou, E. Hong, S.H. Kaderali, M.A. Xu, S.-. Stearns, T. Gingras, A.-. Ullman, K.S. Ivarsson, Y. Davey, N.E. Cyert, M.S. (2020). Systematic Discovery of Short Linear Motifs Decodes Calcineurin Phosphatase Signaling. Molecular cell, Vol.79 (2), pp. 342-358.e12.  show abstract

Bandyopadhyay, S. Bhaduri, S. Örd, M. Davey, N.E. Loog, M. Pryciak, P.M. (2020). Comprehensive Analysis of G1 Cyclin Docking Motif Sequences that Control CDK Regulatory Potency In Vivo. Current biology : cb, Vol.30 (22), pp. 4454-4466.e5.  show abstract

Davey, N.E. (2019). The functional importance of structure in unstructured protein regions. Current opinion in structural biology, Vol.56, pp. 155-163.  show abstract

Sebaa, R. Johnson, J. Pileggi, C. Norgren, M. Xuan, J. Sai, Y. Tong, Q. Krystkowiak, I. Bondy-Chorney, E. Davey, N.E. Krogan, N. Downey, M. Harper, M.-. (2019). SIRT3 controls brown fat thermogenesis by deacetylation regulation of pathways upstream of UCP1. Molecular metabolism, Vol.25, pp. 35-49.  show abstract

Smith, R.J. Cordeiro, M.H. Davey, N.E. Vallardi, G. Ciliberto, A. Gross, F. Saurin, A.T. (2019). PP1 and PP2A Use Opposite Phospho-dependencies to Control Distinct Processes at the Kinetochore. Cell reports, Vol.28 (8), pp. 2206-2219.e8.  show abstract

Jespersen, N. Estelle, A. Waugh, N. Davey, N.E. Blikstad, C. Ammon, Y.-. Akhmanova, A. Ivarsson, Y. Hendrix, D.A. Barbar, E. (2019). Systematic identification of recognition motifs for the hub protein LC8. Life science alliance, Vol.2 (4), pp. e201900366-e201900366.  show abstract

Ueki, Y. Kruse, T. Weisser, M.B. Sundell, G.N. Larsen, M.S. Mendez, B.L. Jenkins, N.P. Garvanska, D.H. Cressey, L. Zhang, G. Davey, N. Montoya, G. Ivarsson, Y. Kettenbach, A.N. Nilsson, J. (2019). A Consensus Binding Motif for the PP4 Protein Phosphatase. Molecular cell, Vol.76 (6), pp. 953-964.e6.

Kruse, T. Biedenkopf, N. Hertz, E.P. Dietzel, E. Stalmann, G. López-Méndez, B. Davey, N.E. Nilsson, J. Becker, S. (2018). The Ebola Virus Nucleoprotein Recruits the Host PP2A-B56 Phosphatase to Activate Transcriptional Support Activity of VP30. Molecular cell, Vol.69 (1), pp. 136-145.e6.

Krystkowiak, I. Manguy, J. Davey, N.E. (2018). PSSMSearch: a server for modeling, visualization, proteome-wide discovery and annotation of protein motif specificity determinants. Nucleic acids research, Vol.46 (W1), pp. W235-W241.

Bentley-DeSousa, A. Holinier, C. Moteshareie, H. Tseng, Y.-. Kajjo, S. Nwosu, C. Amodeo, G.F. Bondy-Chorney, E. Sai, Y. Rudner, A. Golshani, A. Davey, N.E. Downey, M. (2018). A Screen for Candidate Targets of Lysine Polyphosphorylation Uncovers a Conserved Network Implicated in Ribosome Biogenesis. Cell reports, Vol.22 (13), pp. 3427-3439.

Chhabra, S. Fischer, P. Takeuchi, K. Dubey, A. Ziarek, J.J. Boeszoermenyi, A. Mathieu, D. Bermel, W. Davey, N.E. Wagner, G. Arthanari, H. (2018). 15 N detection harnesses the slow relaxation property of nitrogen: Delivering enhanced resolution for intrinsically disordered proteins. Proceedings of the national academy of sciences, Vol.115 (8).  show abstract

Gouw, M. Michael, S. Sámano-Sánchez, H. Kumar, M. Zeke, A. Lang, B. Bely, B. Chemes, L.B. Davey, N.E. Deng, Z. Diella, F. Gürth, C.-. Huber, A.-. Kleinsorg, S. Schlegel, L.S. Palopoli, N. Roey, K.V. Altenberg, B. Reményi, A. Dinkel, H. Gibson, T.J. (2018). The eukaryotic linear motif resource - 2018 update. Nucleic acids res., Vol.46, pp. D428-D434.

Piovesan, D. Tabaro, F. Paladin, L. Necci, M. Micetic, I. Camilloni, C. Davey, N.E. Dosztányi, Z. Mészáros, B. Monzon, A.M. Parisi, G.D. Schád, É. Sormanni, P. Tompa, P. Vendruscolo, M. Vranken, W.F. Tosatto, S.C. (2018). MobiDB 3 0: more annotations for intrinsic disorder, conformational diversity and interactions in proteins. Nucleic acids res., Vol.46, pp. D471-D476.

Davey, N.E. Seo, M. Yadav, V.K. Jeon, J. Nim, S. Krystkowiak, I. Blikstad, C. Dong, D. Markova, N. Kim, P.M. Ivarsson, Y. (2017). Discovery of short linear motif‐mediated interactions through phage display of intrinsically disordered regions of the human proteome. The febs journal, Vol.284 (3), pp. 485-498.

Manguy, J. Jehl, P. Dillon, E.T. Davey, N.E. Shields, D.C. Holton, T.A. (2017). Peptigram: A Web-Based Application for Peptidomics Data Visualization. Journal of proteome research, Vol.16 (2), pp. 712-719.

Krystkowiak, I. Davey, N.E. (2017). SLiMSearch: a framework for proteome-wide discovery and annotation of functional modules in intrinsically disordered regions. Nucleic acids res., Vol.45, pp. W464-W469.

Piovesan, D. Tabaro, F. Micetic, I. Necci, M. Quaglia, F. Oldfield, C.J. Aspromonte, M.C. Davey, N.E. Davidovic, R. Dosztányi, Z. Elofsson, A. Gasparini, A. Hatos, A. Kajava, A.V. Kalmár, L. Leonardi, E. Lazar, T. Macedo-Ribeiro, S. Macossay-Castillo, M. Meszaros, A. Minervini, G. Murvai, N. Pujols, J. Roche, D.B. Salladini, E. Schád, É. Schramm, A. Szabó, B. Tantos, Á. Tonello, F. Tsirigos, K.D. Veljkovic, N. Ventura, S. Vranken, W.F. Warholm, P. Uversky, V.N. Dunker, A.K. Longhi, S. Tompa, P. Tosatto, S.C. (2017). DisProt 7 0: a major update of the database of disordered proteins. Nucleic acids res., Vol.45, pp. D219-D227.

Di Fiore, B. Wurzenberger, C. Davey, N.E. Pines, J. (2016). The Mitotic Checkpoint Complex Requires an Evolutionary Conserved Cassette to Bind and Inhibit Active APC/C. Molecular cell, Vol.64 (6), pp. 1144-1153.  show abstract

Hertz, E.P. Kruse, T. Davey, N.E. López-Méndez, B. Sigurðsson, J.O. Montoya, G. Olsen, J.V. Nilsson, J. (2016). A Conserved Motif Provides Binding Specificity to the PP2A-B56 Phosphatase. Molecular cell, Vol.63 (4), pp. 686-695.

Davey, N.E. Morgan, D.O. (2016). Building a Regulatory Network with Short Linear Sequence Motifs: Lessons from the Degrons of the Anaphase-Promoting Complex. Molecular cell, Vol.64 (1), pp. 12-23.

Jehl, P. Manguy, J. Shields, D.C. Higgins, D.G. Davey, N.E. (2016). ProViz - a web-based visualization tool to investigate the functional and evolutionary features of protein sequences. Nucleic acids res., Vol.44, pp. W11-W15.

Dinkel, H. Roey, K.V. Michael, S. Kumar, M. Uyar, B. Altenberg, B. Milchevskaya, V. Schneider, M. Kühn, H. Behrendt, A. Dahl, S.L. Damerell, V. Diebel, S. Kalman, S. Klein, S. Knudsen, A.C. Mäder, C. Merrill, S. Staudt, A. Thiel, V. Welti, L. Davey, N.E. Diella, F. Gibson, T.J. (2016). ELM 2016 - data update and new functionality of the eukaryotic linear motif resource. Nucleic acids res., Vol.44, pp. 294-300.

Downey, M. Johnson, J.R. Davey, N.E. Newton, B.W. Johnson, T.L. Galaang, S. Seller, C.A. Krogan, N. Toczyski, D.P. (2015). Acetylome Profiling Reveals Overlap in the Regulation of Diverse Processes by Sirtuins, Gcn5, and Esa1. Molecular & cellular proteomics, Vol.14 (1), pp. 162-176.

Di Fiore, B. Davey, N.E. Hagting, A. Izawa, D. Mansfeld, J. Gibson, T.J. Pines, J. (2015). The ABBA Motif Binds APC/C Activators and Is Shared by APC/C Substrates and Regulators. Developmental cell, Vol.32 (3), pp. 358-372.

Van Roey, K. Davey, N.E. (2015). Motif co-regulation and co-operativity are common mechanisms in transcriptional, post-transcriptional and post-translational regulation. Cell communication and signaling, Vol.13 (1).

Davey, N.E. Cyert, M.S. Moses, A.M. (2015). Short linear motifs – ex nihilo evolution of protein regulation. Cell communication and signaling, Vol.13 (1).

Tompa, P. Davey, N.E. Gibson, T.J. Babu, M.M. (2014). A Million Peptide Motifs for the Molecular Biologist. Molecular cell, Vol.55 (2), pp. 161-169.

Van Roey, K. Uyar, B. Weatheritt, R.J. Dinkel, H. Seiler, M. Budd, A. Gibson, T.J. Davey, N.E. (2014). Short Linear Motifs: Ubiquitous and Functionally Diverse Protein Interaction Modules Directing Cell Regulation. Chemical reviews, Vol.114 (13), pp. 6733-6778.

Lu, D. Hsiao, J.Y. Davey, N.E. Van Voorhis, V.A. Foster, S.A. Tang, C. Morgan, D.O. (2014). Multiple mechanisms determine the order of APC/C substrate degradation in mitosis. Journal of cell biology, Vol.207 (1), pp. 23-39.  show abstract

Davey, N.E. Satagopam, V.P. Santiago-Mozos, S. Villacorta-Martin, C. Bharat, T.A. Schneider, R. Briggs, J.A. (2014). The HIV Mutation Browser: A Resource for Human Immunodeficiency Virus Mutagenesis and Polymorphism Data. Plos comput. biol., Vol.10.

Dinkel, H. Roey, K.V. Michael, S. Davey, N.E. Weatheritt, R.J. Born, D. Speck, T. Krüger, D. Grebnev, G. Kuban, M. Strumillo, M. Uyar, B. Budd, A. Altenberg, B. Seiler, M. Chemes, L.B. Glavina, J. Sánchez, I.E. Diella, F. Gibson, T.J. (2014). The eukaryotic linear motif resource ELM: 10 years and counting. Nucleic acids res., Vol.42, pp. 259-266.

Perfetto, L. Gherardini, P.F. Davey, N.E. Diella, F. Helmer-Citterich, M. Cesareni, G. (2013). Exploring the diversity of SPRY/B30 2-mediated interactions. Trends in biochemical sciences, Vol.38 (1), pp. 38-46.

Van Roey, K. Dinkel, H. Weatheritt, R.J. Gibson, T.J. Davey, N.E. (2013). The switches ELM Resource: A Compendium of Conditional Regulatory Interaction Interfaces. Science signaling, Vol.6 (269).  show abstract

Castello, A. Fischer, B. Eichelbaum, K. Horos, R. Beckmann, B.M. Strein, C. Davey, N.E. Humphreys, D.T. Preiss, T. Steinmetz, L.M. Krijgsveld, J. Hentze, M.W. (2012). Insights into RNA Biology from an Atlas of Mammalian mRNA-Binding Proteins. Cell, Vol.149 (6), pp. 1393-1406.

Van Roey, K. Gibson, T.J. Davey, N.E. (2012). Motif switches: decision-making in cell regulation. Current opinion in structural biology, Vol.22 (3), pp. 378-385.

Vijayakumar, V. Guerrero, A.N. Davey, N. Lebrilla, C.B. Shields, D.C. Khaldi, N. (2012). EnzymePredictor: A Tool for Predicting and Visualizing Enzymatic Cleavages of Digested Proteins. Journal of proteome research, Vol.11 (12), pp. 6056-6065.

Weatheritt, R.J. Davey, N.E. Gibson, T.J. (2012). Linear motifs confer functional diversity onto splice variants. Nucleic acids research, Vol.40 (15), pp. 7123-7131.

Jiang, K. Toedt, G. Montenegro Gouveia, S. Davey, N.E. Hua, S. van der Vaart, B. Grigoriev, I. Larsen, J. Pedersen, L.B. Bezstarosti, K. Lince-Faria, M. Demmers, J. Steinmetz, M.O. Gibson, T.J. Akhmanova, A. (2012). A Proteome-wide Screen for Mammalian SxIP Motif-Containing Microtubule Plus-End Tracking Proteins. Current biology, Vol.22 (19), pp. 1800-1807.

Davey, N.E. Cowan, J.L. Shields, D.C. Gibson, T.J. Coldwell, M.J. Edwards, R.J. (2012). SLiMPrints: conservation-based discovery of functional motif fingerprints in intrinsically disordered protein regions. Nucleic acids research, Vol.40 (21), pp. 10628-10641.

Naumer, M. Sonntag, F. Schmidt, K. Nieto, K. Panke, C. Davey, N.E. Popa-Wagner, R. Kleinschmidt, J.A. (2012). Properties of the Adeno-Associated Virus Assembly-Activating Protein. Journal of virology, Vol.86 (23), pp. 13038-13048.  show abstract

Bharat, T.A. Davey, N.E. Ulbrich, P. Riches, J.D. de Marco, A. Rumlova, M. Sachse, C. Ruml, T. Briggs, J.A. (2012). Structure of the immature retroviral capsid at 8 Å resolution by cryo-electron microscopy. Nature, Vol.487 (7407), pp. 385-389.

Weatheritt, R.J. Luck, K. Petsalaki, E. Davey, N.E. Gibson, T.J. (2012). The identification of short linear motif-mediated interfaces within the human interactome. Bioinform., Vol.28, pp. 976-982.

Dinkel, H. Michael, S. Weatheritt, R.J. Davey, N.E. Roey, K.V. Altenberg, B. Toedt, G. Uyar, B. Seiler, M. Budd, A. Jödicke, L. Dammert, M.A. Schroeter, C. Hammer, M. Schmidt, T. Jehl, P. McGuigan, C. Dymecka, M. Chica, C. Luck, K. Via, A. Chatr-aryamontri, A. Haslam, N.J. Grebnev, G. Edwards, R.J. Steinmetz, M.O. Meiselbach, H. Diella, F. Gibson, T.J. (2012). ELM - the database of eukaryotic linear motifs. Nucleic acids res., Vol.40, pp. 242-251.

Davey, N.E. Travé, G. Gibson, T.J. (2011). How viruses hijack cell regulation. Trends in biochemical sciences, Vol.36 (3), pp. 159-169.

Davey, N.E. Haslam, N.J. Shields, D.C. Edwards, R.J. (2011). SLiMSearch 2 0: biological context for short linear motifs in proteins. Nucleic acids res., Vol.39, pp. 56-60.

Mooney, C. Davey, N. Martin, A.J. Walsh, I. Shields, D.C. Pollastri, G. (2011). In Silico Protein Motif Discovery and Structural Analysis. , , pp. 341-353.

Gould, C.M. Diella, F. Via, A. Puntervoll, P. Gemünd, C. Chabanis-Davidson, S. Michael, S. Sayadi, A. Bryne, J.C. Chica, C. Seiler, M. Davey, N.E. Haslam, N. Weatheritt, R.J. Budd, A. Hughes, T. Pas, J. Rychlewski, L. Travé, G. Aasland, R. Helmer-Citterich, M. Linding, R. Gibson, T.J. (2010). ELM: the status of the 2010 eukaryotic linear motif resource. Nucleic acids res, Vol.38 (Database issue), pp. D167-D180.  show abstract

de Marco, A. Davey, N.E. Ulbrich, P. Phillips, J.M. Lux, V. Riches, J.D. Fuzik, T. Ruml, T. Kräusslich, H.-. Vogt, V.M. Briggs, J.A. (2010). Conserved and Variable Features of Gag Structure and Arrangement in Immature Retrovirus Particles. Journal of virology, Vol.84 (22), pp. 11729-11736.  show abstract

Davey, N.E. Edwards, R.J. Shields, D.C. (2010). Estimation and efficient computation of the true probability of recurrence of short linear protein sequence motifs in unrelated proteins. Bmc bioinform., Vol.11, pp. 14-14.

Davey, N.E. Haslam, N.J. Shields, D.C. Edwards, R.J. (2010). SLiMFinder: a web server to find novel, significantly over-represented, short protein motifs. Nucleic acids res., Vol.38, pp. 534-539.

Davey, N.E. (2010). Computational identification and analysis of protein short linear motifs. Frontiers in bioscience, Vol.15 (1), pp. 801-801.

Davey, N.E. Shields, D.C. Edwards, R.J. (2009). Masking residues using context-specific evolutionary conservation significantly improves short linear motif discovery. Bioinform., Vol.25, pp. 443-450.

Casey, F.P. Davey, N.E. Baran, I. Vareková, R.S. Shields, D.C. (2008). Web Server To Identify Similarity of Amino Acid Motifs to Compounds (SAAMCO). J. chem. inf. model., Vol.48, pp. 1524-1529.

Edwards, R.J. Davey, N.E. Shields, D.C. (2008). CompariMotif: quick and easy comparisons of sequence motifs. Bioinform., Vol.24, pp. 1307-1309.

Davey, N.E. Edwards, R.J. Shields, D.C. (2007). The SLiMDisc server: short, linear motif discovery in proteins. Nucleic acids res., Vol.35, pp. 455-459.

Davey, N.E. (2006). SLiMDisc: short, linear motif discovery, correcting for common evolutionary descent. Nucleic acids research, Vol.34 (12), pp. 3546-3554.

Parthasarathi, L. Devocelle, M. Søndergaard, C.R. Baran, I. O'Dushlaine, C. Davey, N.E. Edwards, R.J. Moran, N. Kenny, D. Shields, D.C. (2006). Absolute Net Charge and the Biological Activity of Oligopeptides. J. chem. inf. model., Vol.46, pp. 2183-2190.

Davey, N.E. Van Roey, K. Weatheritt, R.J. Toedt, G. Uyar, B. Altenberg, B. Budd, A. Diella, F. Dinkel, H. Gibson, T.J. Attributes of short linear motifs. Mol. biosyst., Vol.8 (1), pp. 268-281.

Uyar, B. Weatheritt, R.J. Dinkel, H. Davey, N.E. Gibson, T.J. Proteome-wide analysis of human disease mutations in short linear motifs: neglected players in cancer?. Mol. biosyst., Vol.10 (10), pp. 2626-2642.  show abstract

Pushker, R. Mooney, C. Davey, N.E. Jacqué, J.-. Shields, D.C. Marked Variability in the Extent of Protein Disorder within and between Viral Families. Plos one, Vol.8 (4), pp. e60724-e60724.

Edwards, R.J. Davey, N.E. Brien, K.O. Shields, D.C. Interactome-wide prediction of short, disordered protein interaction motifs in humans. Mol. biosyst., Vol.8 (1), pp. 282-295.

Stavropoulos, I. Khaldi, N. Davey, N.E. O’Brien, K. Martin, F. Shields, D.C. Protein Disorder and Short Conserved Motifs in Disordered Regions Are Enriched near the Cytoplasmic Side of Single-Pass Transmembrane Proteins. Plos one, Vol.7 (9), pp. e44389-e44389.

Bharat, T.A. Riches, J.D. Kolesnikova, L. Welsch, S. Krähling, V. Davey, N. Parsy, M.-. Becker, S. Briggs, J.A. Cryo-Electron Tomography of Marburg Virus Particles and Their Morphogenesis within Infected Cells. Plos biology, Vol.9 (11), pp. e1001196-e1001196.

Edwards, R.J. Davey, N.E. Shields, D.C. SLiMFinder: A Probabilistic Method for Identifying Over-Represented, Convergently Evolved, Short Linear Motifs in Proteins. Plos one, Vol.2 (10), pp. e967-e967.

Hatos, A. Hajdu-Soltész, B. Monzon, A.M. Palopoli, N. Álvarez, L. Aykac-Fas, B. Bassot, C. Benítez, G.I. Bevilacqua, M. Chasapi, A. Chemes, L. Davey, N.E. Davidović, R. Dunker, A.K. Elofsson, A. Gobeill, J. Foutel, N.S. Sudha, G. Guharoy, M. Horvath, T. Iglesias, V. Kajava, A.V. Kovacs, O.P. Lamb, J. Lambrughi, M. Lazar, T. Leclercq, J.Y. Leonardi, E. Macedo-Ribeiro, S. Macossay-Castillo, M. Maiani, E. Manso, J.A. Marino-Buslje, C. Martínez-Pérez, E. Mészáros, B. Mičetić, I. Minervini, G. Murvai, N. Necci, M. Ouzounis, C.A. Pajkos, M. Paladin, L. Pancsa, R. Papaleo, E. Parisi, G. Pasche, E. Barbosa Pereira, P.J. Promponas, V.J. Pujols, J. Quaglia, F. Ruch, P. Salvatore, M. Schad, E. Szabo, B. Szaniszló, T. Tamana, S. Tantos, A. Veljkovic, N. Ventura, S. Vranken, W. Dosztányi, Z. Tompa, P. Tosatto, S.C. Piovesan, D. DisProt: intrinsic protein disorder annotation in 2020. Nucleic acids research, .  show abstract

Piovesan, D. Necci, M. Escobedo, N. Monzon, A.M. Hatos, A. Mičetić, I. Quaglia, F. Paladin, L. Ramasamy, P. Dosztányi, Z. Vranken, W.F. Davey, N.E. Parisi, G. Fuxreiter, M. Tosatto, S.C. MobiDB: intrinsically disordered proteins in 2021. Nucleic acids research, Vol.49 (D1), pp. D361-D367.  show abstract

Quaglia, F. Mészáros, B. Salladini, E. Hatos, A. Pancsa, R. Chemes, L.B. Pajkos, M. Lazar, T. Peña-Díaz, S. Santos, J. Ács, V. Farahi, N. Fichó, E. Aspromonte, M.C. Bassot, C. Chasapi, A. Davey, N.E. Davidović, R. Dobson, L. Elofsson, A. Erdős, G. Gaudet, P. Giglio, M. Glavina, J. Iserte, J. Iglesias, V. Kálmán, Z. Lambrughi, M. Leonardi, E. Longhi, S. Macedo-Ribeiro, S. Maiani, E. Marchetti, J. Marino-Buslje, C. Mészáros, A. Monzon, A.M. Minervini, G. Nadendla, S. Nilsson, J.F. Novotný, M. Ouzounis, C.A. Palopoli, N. Papaleo, E. Pereira, P.J. Pozzati, G. Promponas, V.J. Pujols, J. Rocha, A.C. Salas, M. Sawicki, L.R. Schad, E. Shenoy, A. Szaniszló, T. Tsirigos, K.D. Veljkovic, N. Parisi, G. Ventura, S. Dosztányi, Z. Tompa, P. Tosatto, S.C. Piovesan, D. DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation. Nucleic acids research, Vol.50 (D1), pp. D480-D487.  show abstract

Kumar, M. Michael, S. Alvarado-Valverde, J. Mészáros, B. Sámano-Sánchez, H. Zeke, A. Dobson, L. Lazar, T. Örd, M. Nagpal, A. Farahi, N. Käser, M. Kraleti, R. Davey, N.E. Pancsa, R. Chemes, L.B. Gibson, T.J. The Eukaryotic Linear Motif resource: 2022 release. Nucleic acids research, Vol.50 (D1), pp. D497-D508.  show abstract

Benz, C. Ali, M. Krystkowiak, I. Simonetti, L. Sayadi, A. Mihalic, F. Kliche, J. Andersson, E. Jemth, P. Davey, N.E. Ivarsson, Y. Proteome-scale mapping of binding sites in the unstructured regions of the human proteome. Molecular systems biology, Vol.18 (1), pp. e10584-?.  show abstract


Conferences

Davey, N.E.Haslam, N.J.Shields, D.C.Edwards, R.J. (2010). SLiMSearch: A Webserver for Finding Novel Occurrences of Short Linear Motifs in Proteins, Incorporating Sequence Context., PRIB, Vol.6282, pp.50-61.

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