substitution minor allele frequency (MAF) submission details id snp id gene locuslink id chromosome chromosome coordinate mRNA accession protein accession nucleotide amino acid UCSC strand subsnp id population id population handle local population id population description total chromosomes genotyped MAF update build validation criteria cytogenic gene description 1 rs328 LPL 4023 8 19864004 NM_000237 NP_000228 C/G S474X plus 3173350 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 112 0.02 123 "by cluster,freq" 8p22 lipoprotein lipase 2 rs328 LPL 4023 8 19864004 NM_000237 NP_000228 C/G S474X plus 4921960 738 YUSUKE JBIC-ALLELE Japanese (752) 1458 0.14 123 "by cluster,freq" 8p22 lipoprotein lipase 3 rs328 LPL 4023 8 19864004 NM_000237 NP_000228 C/G S474X plus 10467174 1303 SEQUENOM CEPH CEPH (92) 92 0.36 123 "by cluster,freq" 8p22 lipoprotein lipase 4 rs328 LPL 4023 8 19864004 NM_000237 NP_000228 C/G S474X plus 24648907 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.27 123 "by cluster,freq" 8p22 lipoprotein lipase 5 rs328 LPL 4023 8 19864004 NM_000237 NP_000228 C/G S474X plus 24648907 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.05 123 "by cluster,freq" 8p22 lipoprotein lipase 6 rs328 LPL 4023 8 19864004 NM_000237 NP_000228 C/G S474X plus 24648907 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.07 123 "by cluster,freq" 8p22 lipoprotein lipase 7 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 667 506 NCBI NIHPDR NIHPDR 180 0.48 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 8 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 4573 490 HU-CHINA HAN Chinese 4000 0.4 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 9 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 4573 491 HU-CHINA CAU "Australian, Belgian, Canadian, English, Finnish, French, German and USA" 460 0.33 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 10 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 5111592 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.33 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 11 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 5111592 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.17 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 12 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 5111592 1303 SEQUENOM CEPH CEPH (92) 92 0.18 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 13 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 5586846 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.49 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 14 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 5586846 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.27 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 15 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 5586846 776 SNP500CANCER AFR1 African / African-American (24) 48 0.37 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 16 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 5586846 777 SNP500CANCER HISP1 Hispanic (23) 46 0.48 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 17 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 5586846 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.37 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 18 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 16338591 1120 WIPGA POP-WIPGA-12-05-2003 CORIELL Mixed 56 0.34 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 19 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 24194186 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.17 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 20 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 24194186 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.31 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 21 rs662 PON1 5444 7 94582097 NM_000446 NP_000437 A/G Q192R minus 24194186 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.41 123 "by submitter,freq,cluster" 7q21.3 paraoxonase 1 22 rs665 FUCA1 2517 1 23926347 NM_000147 NP_000138 A/G V255I minus 670 885 TSC-CSHL HapMap-CEPH-30-trios 118 1 36 HapMap 1p34 "fucosidase, alpha-L- 1, tissue" 23 rs671 ALDH2 217 12 110704486 NM_000690 NP_000681 A/G E504K plus 3177110 619 WICVAR MITOGPOP6 CORIELL Mixed 62 0.06 123 "by cluster,freq" 12q24.2 aldehyde dehydrogenase 2 family (mitochondrial) 24 rs671 ALDH2 217 12 110704486 NM_000690 NP_000681 A/G E504K plus 5586234 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 196 0.04 123 "by cluster,freq" 12q24.2 aldehyde dehydrogenase 2 family (mitochondrial) 25 rs671 ALDH2 217 12 110704486 NM_000690 NP_000681 A/G E504K plus 5586234 775 SNP500CANCER CAUC1 Caucasian (31) 58 1 123 "by cluster,freq" 12q24.2 aldehyde dehydrogenase 2 family (mitochondrial) 26 rs671 ALDH2 217 12 110704486 NM_000690 NP_000681 A/G E504K plus 5586234 776 SNP500CANCER AFR1 African / African-American (24) 48 1 123 "by cluster,freq" 12q24.2 aldehyde dehydrogenase 2 family (mitochondrial) 27 rs671 ALDH2 217 12 110704486 NM_000690 NP_000681 A/G E504K plus 5586234 777 SNP500CANCER HISP1 Hispanic (23) 44 1 123 "by cluster,freq" 12q24.2 aldehyde dehydrogenase 2 family (mitochondrial) 28 rs671 ALDH2 217 12 110704486 NM_000690 NP_000681 A/G E504K plus 5586234 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.17 123 "by cluster,freq" 12q24.2 aldehyde dehydrogenase 2 family (mitochondrial) 29 rs671 ALDH2 217 12 110704486 NM_000690 NP_000681 A/G E504K plus 6396276 821 KIDDLAB PO000009J 96 0.27 123 "by cluster,freq" 12q24.2 aldehyde dehydrogenase 2 family (mitochondrial) 30 rs671 ALDH2 217 12 110704486 NM_000690 NP_000681 A/G E504K plus 23975064 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 12q24.2 aldehyde dehydrogenase 2 family (mitochondrial) 31 rs671 ALDH2 217 12 110704486 NM_000690 NP_000681 A/G E504K plus 23975064 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by cluster,freq" 12q24.2 aldehyde dehydrogenase 2 family (mitochondrial) 32 rs671 ALDH2 217 12 110704486 NM_000690 NP_000681 A/G E504K plus 23975064 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.23 123 "by cluster,freq" 12q24.2 aldehyde dehydrogenase 2 family (mitochondrial) 33 rs678 ITIH1 3697 3 52796021 NM_002215 NP_002206 A/T E585V plus 21978763 1303 SEQUENOM CEPH CEPH (92) 92 0.38 123 "by cluster,freq" 3p21.2-p21.1 inter-alpha (globulin) inhibitor H1 34 rs678 ITIH1 3697 3 52796021 NM_002215 NP_002206 A/T E585V plus 24349616 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.46 123 "by cluster,freq" 3p21.2-p21.1 inter-alpha (globulin) inhibitor H1 35 rs678 ITIH1 3697 3 52796021 NM_002215 NP_002206 A/T E585V plus 24349616 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.15 123 "by cluster,freq" 3p21.2-p21.1 inter-alpha (globulin) inhibitor H1 36 rs678 ITIH1 3697 3 52796021 NM_002215 NP_002206 A/T E585V plus 24349616 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.38 123 "by cluster,freq" 3p21.2-p21.1 inter-alpha (globulin) inhibitor H1 37 rs699 AGT 183 1 227152529 NM_000029 NP_000020 C/T M268T minus 6484 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 123 "by doubleHit,freq,cluster" 1q42-q43 "angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8)" 38 rs699 AGT 183 1 227152529 NM_000029 NP_000020 C/T M268T minus 11901 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.43 123 "by doubleHit,freq,cluster" 1q42-q43 "angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8)" 39 rs699 AGT 183 1 227152529 NM_000029 NP_000020 C/T M268T minus 3240877 738 YUSUKE JBIC-ALLELE Japanese (752) 1064 0.19 123 "by doubleHit,freq,cluster" 1q42-q43 "angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8)" 40 rs699 AGT 183 1 227152529 NM_000029 NP_000020 C/T M268T minus 16338660 1120 WIPGA POP-WIPGA-12-05-2003 CORIELL Mixed 78 0.4 123 "by doubleHit,freq,cluster" 1q42-q43 "angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8)" 41 rs699 AGT 183 1 227152529 NM_000029 NP_000020 C/T M268T minus 16338962 1122 PARC PARC-AFRICAN-PANEL CORIELL African-American (24) 48 0.17 123 "by doubleHit,freq,cluster" 1q42-q43 "angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8)" 42 rs699 AGT 183 1 227152529 NM_000029 NP_000020 C/T M268T minus 16338962 1123 PARC PARC-EUROPEAN-PANEL CEPH (23) 4 0.25 123 "by doubleHit,freq,cluster" 1q42-q43 "angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8)" 43 rs699 AGT 183 1 227152529 NM_000029 NP_000020 C/T M268T minus 16338962 1303 SEQUENOM CEPH CEPH (92) 92 0.43 123 "by doubleHit,freq,cluster" 1q42-q43 "angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8)" 44 rs699 AGT 183 1 227152529 NM_000029 NP_000020 C/T M268T minus 20420720 889 PHARMGKB_PARC PA128275074 94 0.35 123 "by doubleHit,freq,cluster" 1q42-q43 "angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8)" 45 rs704 VTN 7448 17 23718988 NM_000638 NP_000629 C/T T400M minus 8443 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.48 121 "by doubleHit,freq,cluster" 17q11 "vitronectin (serum spreading factor, somatomedin B, complement S-protein)" 46 rs704 VTN 7448 17 23718988 NM_000638 NP_000629 C/T T400M minus 1352184 780 TSC-CSHL WICGR8_ASIAN_POOLED WICGR Asian (30) 84 0.19 121 "by doubleHit,freq,cluster" 17q11 "vitronectin (serum spreading factor, somatomedin B, complement S-protein)" 47 rs704 VTN 7448 17 23718988 NM_000638 NP_000629 C/T T400M minus 1352184 782 TSC-CSHL WICGR6_CAUCASIAN_POOLED WICGR Caucasian (48) 96 0.45 121 "by doubleHit,freq,cluster" 17q11 "vitronectin (serum spreading factor, somatomedin B, complement S-protein)" 48 rs704 VTN 7448 17 23718988 NM_000638 NP_000629 C/T T400M minus 3172312 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 46 0.48 121 "by doubleHit,freq,cluster" 17q11 "vitronectin (serum spreading factor, somatomedin B, complement S-protein)" 49 rs704 VTN 7448 17 23718988 NM_000638 NP_000629 C/T T400M minus 3172312 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.43 121 "by doubleHit,freq,cluster" 17q11 "vitronectin (serum spreading factor, somatomedin B, complement S-protein)" 50 rs704 VTN 7448 17 23718988 NM_000638 NP_000629 C/T T400M minus 3172312 1303 SEQUENOM CEPH CEPH (92) 91 0.47 121 "by doubleHit,freq,cluster" 17q11 "vitronectin (serum spreading factor, somatomedin B, complement S-protein)" 51 rs1124 SFTPC 6440 8 22077462 NM_003018 NP_003009 A/G S186N plus 9612 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.32 120 "by doubleHit,freq,cluster" 8p21 "surfactant, pulmonary-associated protein C" 52 rs1124 SFTPC 6440 8 22077462 NM_003018 NP_003009 A/G S186N plus 3194963 738 YUSUKE JBIC-ALLELE Japanese (752) 1454 0.31 120 "by doubleHit,freq,cluster" 8p21 "surfactant, pulmonary-associated protein C" 53 rs1124 SFTPC 6440 8 22077462 NM_003018 NP_003009 A/G S186N plus 12586539 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.02 120 "by doubleHit,freq,cluster" 8p21 "surfactant, pulmonary-associated protein C" 54 rs1124 SFTPC 6440 8 22077462 NM_003018 NP_003009 A/G S186N plus 12586539 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.22 120 "by doubleHit,freq,cluster" 8p21 "surfactant, pulmonary-associated protein C" 55 rs1124 SFTPC 6440 8 22077462 NM_003018 NP_003009 A/G S186N plus 12586539 1303 SEQUENOM CEPH CEPH (92) 92 0.32 120 "by doubleHit,freq,cluster" 8p21 "surfactant, pulmonary-associated protein C" 56 rs1208 NAT2 10 8 18302596 NM_000015 NP_000006 A/G R268K plus 1233 604 KWOK HydatidiformMoles 10 0.4 123 "by doubleHit,freq,cluster" 8p22 N-acetyltransferase 2 (arylamine N-acetyltransferase) 57 rs1208 NAT2 10 8 18302596 NM_000015 NP_000006 A/G R268K plus 2323986 780 TSC-CSHL WICGR8_ASIAN_POOLED WICGR Asian (30) 84 0.02 123 "by doubleHit,freq,cluster" 8p22 N-acetyltransferase 2 (arylamine N-acetyltransferase) 58 rs1208 NAT2 10 8 18302596 NM_000015 NP_000006 A/G R268K plus 2323986 782 TSC-CSHL WICGR6_CAUCASIAN_POOLED WICGR Caucasian (48) 96 0.29 123 "by doubleHit,freq,cluster" 8p22 N-acetyltransferase 2 (arylamine N-acetyltransferase) 59 rs1208 NAT2 10 8 18302596 NM_000015 NP_000006 A/G R268K plus 2323986 1303 SEQUENOM CEPH CEPH (92) 92 0.35 123 "by doubleHit,freq,cluster" 8p22 N-acetyltransferase 2 (arylamine N-acetyltransferase) 60 rs1208 NAT2 10 8 18302596 NM_000015 NP_000006 A/G R268K plus 5586793 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.37 123 "by doubleHit,freq,cluster" 8p22 N-acetyltransferase 2 (arylamine N-acetyltransferase) 61 rs1208 NAT2 10 8 18302596 NM_000015 NP_000006 A/G R268K plus 5586793 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.4 123 "by doubleHit,freq,cluster" 8p22 N-acetyltransferase 2 (arylamine N-acetyltransferase) 62 rs1208 NAT2 10 8 18302596 NM_000015 NP_000006 A/G R268K plus 5586793 776 SNP500CANCER AFR1 African / African-American (24) 24 0.5 123 "by doubleHit,freq,cluster" 8p22 N-acetyltransferase 2 (arylamine N-acetyltransferase) 63 rs1208 NAT2 10 8 18302596 NM_000015 NP_000006 A/G R268K plus 5586793 777 SNP500CANCER HISP1 Hispanic (23) 46 0.48 123 "by doubleHit,freq,cluster" 8p22 N-acetyltransferase 2 (arylamine N-acetyltransferase) 64 rs1208 NAT2 10 8 18302596 NM_000015 NP_000006 A/G R268K plus 5586793 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.09 123 "by doubleHit,freq,cluster" 8p22 N-acetyltransferase 2 (arylamine N-acetyltransferase) 65 rs1208 NAT2 10 8 18302596 NM_000015 NP_000006 A/G R268K plus 24796685 1303 SEQUENOM CEPH CEPH (92) 184 0.35 123 "by doubleHit,freq,cluster" 8p22 N-acetyltransferase 2 (arylamine N-acetyltransferase) 66 rs1258 TAF1L 138474 9 32623119 NM_153809 NP_722516 A/G M820T plus 24810791 1303 SEQUENOM CEPH CEPH (92) 184 0.06 123 "by cluster,freq" 9p13.3 "TAF1-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa" 67 rs1303 SERPINA1 5265 14 93914596 NM_000295 NP_000286 G/T E400D plus 1328 604 KWOK HydatidiformMoles 10 0.4 123 "by doubleHit,submitter,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 68 rs1303 SERPINA1 5265 14 93914596 NM_000295 NP_000286 G/T E400D plus 8326 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.3 123 "by doubleHit,submitter,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 69 rs1303 SERPINA1 5265 14 93914596 NM_000295 NP_000286 G/T E400D plus 20190 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 38 0.33 123 "by doubleHit,submitter,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 70 rs1303 SERPINA1 5265 14 93914596 NM_000295 NP_000286 G/T E400D plus 2987614 738 YUSUKE JBIC-ALLELE Japanese (752) 1486 0.28 123 "by doubleHit,submitter,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 71 rs1303 SERPINA1 5265 14 93914596 NM_000295 NP_000286 G/T E400D plus 16651029 1303 SEQUENOM CEPH CEPH (92) 92 0.3 123 "by doubleHit,submitter,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 72 rs1303 SERPINA1 5265 14 93914596 NM_000295 NP_000286 G/T E400D plus 24129831 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.19 123 "by doubleHit,submitter,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 73 rs1303 SERPINA1 5265 14 93914596 NM_000295 NP_000286 G/T E400D plus 24129831 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "by doubleHit,submitter,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 74 rs1303 SERPINA1 5265 14 93914596 NM_000295 NP_000286 G/T E400D plus 24129831 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.29 123 "by doubleHit,submitter,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 75 rs1320 VPREB1 7441 22 20924091 NM_007128 NP_009059 A/G D76N plus 16359757 649 FHCRC POPU1 USA (20) 40 0.05 123 "by cluster,freq" 22q11.22 pre-B lymphocyte gene 1 76 rs1320 VPREB1 7441 22 20924091 NM_007128 NP_009059 A/G D76N plus 16359757 1303 SEQUENOM CEPH CEPH (92) 92 0.04 123 "by cluster,freq" 22q11.22 pre-B lymphocyte gene 1 77 rs1320 VPREB1 7441 22 20924091 NM_007128 NP_009059 A/G D76N plus 24561156 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.06 123 "by cluster,freq" 22q11.22 pre-B lymphocyte gene 1 78 rs1320 VPREB1 7441 22 20924091 NM_007128 NP_009059 A/G D76N plus 24561156 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by cluster,freq" 22q11.22 pre-B lymphocyte gene 1 79 rs1320 VPREB1 7441 22 20924091 NM_007128 NP_009059 A/G D76N plus 24561156 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 22q11.22 pre-B lymphocyte gene 1 80 rs1395 SLC5A6 8884 2 27336287 NM_021095 NP_066918 A/G S481F plus 1420 604 KWOK HydatidiformMoles 10 0.2 123 "by doubleHit,freq,cluster" 2p23 "solute carrier family 5 (sodium-dependent vitamin transporter), member 6" 81 rs1395 SLC5A6 8884 2 27336287 NM_021095 NP_066918 A/G S481F plus 1468894 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by doubleHit,freq,cluster" 2p23 "solute carrier family 5 (sodium-dependent vitamin transporter), member 6" 82 rs1395 SLC5A6 8884 2 27336287 NM_021095 NP_066918 A/G S481F plus 23191420 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.26 123 "by doubleHit,freq,cluster" 2p23 "solute carrier family 5 (sodium-dependent vitamin transporter), member 6" 83 rs1395 SLC5A6 8884 2 27336287 NM_021095 NP_066918 A/G S481F plus 23191420 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.3 123 "by doubleHit,freq,cluster" 2p23 "solute carrier family 5 (sodium-dependent vitamin transporter), member 6" 84 rs1395 SLC5A6 8884 2 27336287 NM_021095 NP_066918 A/G S481F plus 23191420 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.08 123 "by doubleHit,freq,cluster" 2p23 "solute carrier family 5 (sodium-dependent vitamin transporter), member 6" 85 rs1545 MKKS 8195 20 10334013 NM_018848 NP_061336 A/C G532V plus 3238466 738 YUSUKE JBIC-ALLELE Japanese (752) 1466 0.26 120 "by doubleHit,freq,cluster" 20p12 McKusick-Kaufman syndrome 86 rs1545 MKKS 8195 20 10334013 NM_170784 NP_740754 A/C G532V plus 3238466 738 YUSUKE JBIC-ALLELE Japanese (752) 1466 0.26 120 "by doubleHit,freq,cluster" 20p12 McKusick-Kaufman syndrome 87 rs1547 MKKS 8195 20 10334059 NM_018848 NP_061336 A/G R517C plus 1572 604 KWOK HydatidiformMoles 10 0.2 120 "by doubleHit,freq,cluster" 20p12 McKusick-Kaufman syndrome 88 rs1547 MKKS 8195 20 10334059 NM_018848 NP_061336 A/G R517C plus 3238465 738 YUSUKE JBIC-ALLELE Japanese (752) 1460 0.27 120 "by doubleHit,freq,cluster" 20p12 McKusick-Kaufman syndrome 89 rs1547 MKKS 8195 20 10334059 NM_018848 NP_061336 A/G R517C plus 8435145 1303 SEQUENOM CEPH CEPH (92) 92 0.23 120 "by doubleHit,freq,cluster" 20p12 McKusick-Kaufman syndrome 90 rs1547 MKKS 8195 20 10334059 NM_170784 NP_740754 A/G R517C plus 1572 604 KWOK HydatidiformMoles 10 0.2 120 "by doubleHit,freq,cluster" 20p12 McKusick-Kaufman syndrome 91 rs1547 MKKS 8195 20 10334059 NM_170784 NP_740754 A/G R517C plus 3238465 738 YUSUKE JBIC-ALLELE Japanese (752) 1460 0.27 120 "by doubleHit,freq,cluster" 20p12 McKusick-Kaufman syndrome 92 rs1547 MKKS 8195 20 10334059 NM_170784 NP_740754 A/G R517C plus 8435145 1303 SEQUENOM CEPH CEPH (92) 92 0.23 120 "by doubleHit,freq,cluster" 20p12 McKusick-Kaufman syndrome 93 rs1567 NCOA7 135112 6 126291607 NM_181782 NP_861447 G/T D942E plus 1592 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.15 119 "HapMap,doubleHit,submitter,freq,cluster" 6q22.33 nuclear receptor coactivator 7 94 rs1567 NCOA7 135112 6 126291607 NM_181782 NP_861447 G/T D942E plus 13120002 1303 SEQUENOM CEPH CEPH (92) 92 0.09 119 "HapMap,doubleHit,submitter,freq,cluster" 6q22.33 nuclear receptor coactivator 7 95 rs1666 FANK1 92565 10 127687944 NM_145235 NP_660278 A/C L329V minus 1691 1303 SEQUENOM CEPH CEPH (92) 92 0.01 123 "by cluster,freq" 10q26.2 fibronectin type 3 and ankyrin repeat domains 1 96 rs1666 FANK1 92565 10 127687944 NM_145235 NP_660278 A/C L329V minus 24588815 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "by cluster,freq" 10q26.2 fibronectin type 3 and ankyrin repeat domains 1 97 rs1666 FANK1 92565 10 127687944 NM_145235 NP_660278 A/C L329V minus 24588815 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by cluster,freq" 10q26.2 fibronectin type 3 and ankyrin repeat domains 1 98 rs1666 FANK1 92565 10 127687944 NM_145235 NP_660278 A/C L329V minus 24588815 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 10q26.2 fibronectin type 3 and ankyrin repeat domains 1 99 rs1666 FANK1 92565 10 127687944 NM_145235 NP_660278 A/C L329V minus 28447400 914 HG_BONN_CNS_SNPS EURO96 European 190 0.03 123 "by cluster,freq" 10q26.2 fibronectin type 3 and ankyrin repeat domains 1 100 rs1716 ITGAE 3682 17 3579585 NM_002208 NP_002199 C/T R950W minus 21376295 1303 SEQUENOM CEPH CEPH (92) 92 0.4 121 "by submitter,freq,cluster" 17p13 "integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)" 101 rs1727 IFIT2 3433 10 91056749 NM_001547 NP_001538 A/C D352E plus 1752 604 KWOK HydatidiformMoles 10 1 123 "by doubleHit,freq,cluster" 10q23-q25 interferon-induced protein with tetratricopeptide repeats 2 102 rs1727 IFIT2 3433 10 91056749 NM_001547 NP_001538 A/C D352E plus 2213985 901 AFFY AfAm 40 0.05 123 "by doubleHit,freq,cluster" 10q23-q25 interferon-induced protein with tetratricopeptide repeats 2 103 rs1727 IFIT2 3433 10 91056749 NM_001547 NP_001538 A/C D352E plus 2213985 902 AFFY Caucasian 40 0.1 123 "by doubleHit,freq,cluster" 10q23-q25 interferon-induced protein with tetratricopeptide repeats 2 104 rs1727 IFIT2 3433 10 91056749 NM_001547 NP_001538 A/C D352E plus 2213985 903 AFFY Asian 40 0.03 123 "by doubleHit,freq,cluster" 10q23-q25 interferon-induced protein with tetratricopeptide repeats 2 105 rs1727 IFIT2 3433 10 91056749 NM_001547 NP_001538 A/C D352E plus 2213985 904 AFFY CEPH 44 0.32 123 "by doubleHit,freq,cluster" 10q23-q25 interferon-induced protein with tetratricopeptide repeats 2 106 rs1727 IFIT2 3433 10 91056749 NM_001547 NP_001538 A/C D352E plus 2213985 905 AFFY PDpanel 48 0.21 123 "by doubleHit,freq,cluster" 10q23-q25 interferon-induced protein with tetratricopeptide repeats 2 107 rs1727 IFIT2 3433 10 91056749 NM_001547 NP_001538 A/C D352E plus 2213985 1303 SEQUENOM CEPH CEPH (92) 92 0.17 123 "by doubleHit,freq,cluster" 10q23-q25 interferon-induced protein with tetratricopeptide repeats 2 108 rs1727 IFIT2 3433 10 91056749 NM_001547 NP_001538 A/C D352E plus 24546708 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.29 123 "by doubleHit,freq,cluster" 10q23-q25 interferon-induced protein with tetratricopeptide repeats 2 109 rs1727 IFIT2 3433 10 91056749 NM_001547 NP_001538 A/C D352E plus 24546708 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "by doubleHit,freq,cluster" 10q23-q25 interferon-induced protein with tetratricopeptide repeats 2 110 rs1727 IFIT2 3433 10 91056749 NM_001547 NP_001538 A/C D352E plus 24546708 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.02 123 "by doubleHit,freq,cluster" 10q23-q25 interferon-induced protein with tetratricopeptide repeats 2 111 rs1811 ZNF30 90075 19 40126078 NM_194325 NP_919306 A/G Q42R plus 1836 604 KWOK HydatidiformMoles 10 0.4 120 "by doubleHit,submitter,freq,cluster" 19q13.13 zinc finger protein 30 (KOX 28) 112 rs1818 NCOA6IP 96764 8 56848778 NM_024831 NP_079107 C/T I16T plus 2954714 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.13 123 "HapMap,doubleHit,submitter,freq,cluster" 8q11 nuclear receptor coactivator 6 interacting protein 113 rs1818 NCOA6IP 96764 8 56848778 NM_024831 NP_079107 C/T I16T plus 2954714 1303 SEQUENOM CEPH CEPH (92) 92 0.12 123 "HapMap,doubleHit,submitter,freq,cluster" 8q11 nuclear receptor coactivator 6 interacting protein 114 rs1818 NCOA6IP 96764 8 56848778 NM_024831 NP_079107 C/T I16T plus 23573057 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "HapMap,doubleHit,submitter,freq,cluster" 8q11 nuclear receptor coactivator 6 interacting protein 115 rs1818 NCOA6IP 96764 8 56848778 NM_024831 NP_079107 C/T I16T plus 23573057 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.23 123 "HapMap,doubleHit,submitter,freq,cluster" 8q11 nuclear receptor coactivator 6 interacting protein 116 rs1818 NCOA6IP 96764 8 56848778 NM_024831 NP_079107 C/T I16T plus 23573057 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.02 123 "HapMap,doubleHit,submitter,freq,cluster" 8q11 nuclear receptor coactivator 6 interacting protein 117 rs1899 NDUFAF1 51103 15 39476524 NM_016013 NP_057097 A/G R9H minus 1924 604 KWOK HydatidiformMoles 10 0.2 120 "HapMap,submitter,freq,cluster" 15q11.2-q21.3 "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1" 118 rs1899 NDUFAF1 51103 15 39476524 NM_016013 NP_057097 A/G R9H minus 1924 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.18 120 "HapMap,submitter,freq,cluster" 15q11.2-q21.3 "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1" 119 rs1899 NDUFAF1 51103 15 39476524 NM_016013 NP_057097 A/G R9H minus 17538177 1303 SEQUENOM CEPH CEPH (92) 92 0.36 120 "HapMap,submitter,freq,cluster" 15q11.2-q21.3 "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1" 120 rs1921 G1P2 9636 1 989675 NM_005101 NP_005092 A/G S83N plus 1946 604 KWOK HydatidiformMoles 10 0.2 123 "by cluster,freq" 1p36.33 "interferon, alpha-inducible protein (clone IFI-15K)" 121 rs1921 G1P2 9636 1 989675 NM_005101 NP_005092 A/G S83N plus 24810939 1303 SEQUENOM CEPH CEPH (92) 184 0.37 123 "by cluster,freq" 1p36.33 "interferon, alpha-inducible protein (clone IFI-15K)" 122 rs1989 TM6SF1 53346 15 81572635 NM_023003 NP_075379 C/T P59S plus 2015 604 KWOK HydatidiformMoles 10 0.4 123 "HapMap,submitter,freq,cluster" 15q24-q26 transmembrane 6 superfamily member 1 123 rs1989 TM6SF1 53346 15 81572635 NM_023003 NP_075379 C/T P59S plus 2015 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.1 123 "HapMap,submitter,freq,cluster" 15q24-q26 transmembrane 6 superfamily member 1 124 rs1989 TM6SF1 53346 15 81572635 NM_023003 NP_075379 C/T P59S plus 2015 1303 SEQUENOM CEPH CEPH (92) 92 0.25 123 "HapMap,submitter,freq,cluster" 15q24-q26 transmembrane 6 superfamily member 1 125 rs1989 TM6SF1 53346 15 81572635 NM_023003 NP_075379 C/T P59S plus 24796501 1303 SEQUENOM CEPH CEPH (92) 184 0.13 123 "HapMap,submitter,freq,cluster" 15q24-q26 transmembrane 6 superfamily member 1 126 rs2240 MKI67 4288 10 129797534 NM_002417 NP_002408 C/G L854V plus 2266 604 KWOK HydatidiformMoles 10 0.4 123 "by doubleHit,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 127 rs2240 MKI67 4288 10 129797534 NM_002417 NP_002408 C/G L854V plus 2960666 1303 SEQUENOM CEPH CEPH (92) 92 0.25 123 "by doubleHit,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 128 rs2240 MKI67 4288 10 129797534 NM_002417 NP_002408 C/G L854V plus 23644026 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.21 123 "by doubleHit,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 129 rs2240 MKI67 4288 10 129797534 NM_002417 NP_002408 C/G L854V plus 23644026 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.28 123 "by doubleHit,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 130 rs2240 MKI67 4288 10 129797534 NM_002417 NP_002408 C/G L854V plus 23644026 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.25 123 "by doubleHit,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 131 rs2347 POLR3E 55718 16 22227018 NM_018119 NP_060589 A/C S46A minus 2375 604 KWOK HydatidiformMoles 10 1 123 "HapMap,submitter,freq" 16p12.3 polymerase (RNA) III (DNA directed) polypeptide E (80kD) 132 rs2347 POLR3E 55718 16 22227018 NM_018119 NP_060589 A/C S46A minus 2375 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.08 123 "HapMap,submitter,freq" 16p12.3 polymerase (RNA) III (DNA directed) polypeptide E (80kD) 133 rs2347 POLR3E 55718 16 22227018 NM_018119 NP_060589 A/C S46A minus 2375 1303 SEQUENOM CEPH CEPH (92) 92 0.09 123 "HapMap,submitter,freq" 16p12.3 polymerase (RNA) III (DNA directed) polypeptide E (80kD) 134 rs2347 POLR3E 55718 16 22227018 NM_018119 NP_060589 A/C S46A minus 24569247 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "HapMap,submitter,freq" 16p12.3 polymerase (RNA) III (DNA directed) polypeptide E (80kD) 135 rs2347 POLR3E 55718 16 22227018 NM_018119 NP_060589 A/C S46A minus 24569247 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "HapMap,submitter,freq" 16p12.3 polymerase (RNA) III (DNA directed) polypeptide E (80kD) 136 rs2347 POLR3E 55718 16 22227018 NM_018119 NP_060589 A/C S46A minus 24569247 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 1 123 "HapMap,submitter,freq" 16p12.3 polymerase (RNA) III (DNA directed) polypeptide E (80kD) 137 rs2461 PABPC3 5042 13 24568988 NM_030979 NP_112241 G/T L218V plus 24796454 1303 SEQUENOM CEPH CEPH (92) 184 0.32 123 "by cluster,freq" 13q12-q13 "poly(A) binding protein, cytoplasmic 3" 138 rs2461 PABPC3 5042 13 24568988 NM_030979 NP_112241 G/T L218V plus 24804335 1303 SEQUENOM CEPH CEPH (92) 184 0.46 123 "by cluster,freq" 13q12-q13 "poly(A) binding protein, cytoplasmic 3" 139 rs2640 HRI 27102 7 5839691 NM_014413 NP_055228 C/T K558R plus 2670 604 KWOK HydatidiformMoles 10 1 123 "HapMap,freq,cluster" 7p22 heme-regulated initiation factor 2-alpha kinase 140 rs2640 HRI 27102 7 5839691 NM_014413 NP_055228 C/T K558R plus 2670 885 TSC-CSHL HapMap-CEPH-30-trios 110 0.03 123 "HapMap,freq,cluster" 7p22 heme-regulated initiation factor 2-alpha kinase 141 rs2640 HRI 27102 7 5839691 NM_014413 NP_055228 C/T K558R plus 2670 1303 SEQUENOM CEPH CEPH (92) 92 0.09 123 "HapMap,freq,cluster" 7p22 heme-regulated initiation factor 2-alpha kinase 142 rs2640 HRI 27102 7 5839691 NM_014413 NP_055228 C/T K558R plus 4551 490 HU-CHINA HAN Chinese 4000 0.33 123 "HapMap,freq,cluster" 7p22 heme-regulated initiation factor 2-alpha kinase 143 rs2640 HRI 27102 7 5839691 NM_014413 NP_055228 C/T K558R plus 4551 491 HU-CHINA CAU "Australian, Belgian, Canadian, English, Finnish, French, German and USA" 460 0.11 123 "HapMap,freq,cluster" 7p22 heme-regulated initiation factor 2-alpha kinase 144 rs2640 HRI 27102 7 5839691 NM_014413 NP_055228 C/T K558R plus 16336055 901 AFFY AfAm 12 1 123 "HapMap,freq,cluster" 7p22 heme-regulated initiation factor 2-alpha kinase 145 rs2640 HRI 27102 7 5839691 NM_014413 NP_055228 C/T K558R plus 16336055 902 AFFY Caucasian 22 0.09 123 "HapMap,freq,cluster" 7p22 heme-regulated initiation factor 2-alpha kinase 146 rs2640 HRI 27102 7 5839691 NM_014413 NP_055228 C/T K558R plus 16336055 903 AFFY Asian 10 0.2 123 "HapMap,freq,cluster" 7p22 heme-regulated initiation factor 2-alpha kinase 147 rs2640 HRI 27102 7 5839691 NM_014413 NP_055228 C/T K558R plus 16336055 904 AFFY CEPH 12 1 123 "HapMap,freq,cluster" 7p22 heme-regulated initiation factor 2-alpha kinase 148 rs2640 HRI 27102 7 5839691 NM_014413 NP_055228 C/T K558R plus 16336055 905 AFFY PDpanel 48 0.04 123 "HapMap,freq,cluster" 7p22 heme-regulated initiation factor 2-alpha kinase 149 rs2640 HRI 27102 7 5839691 NM_014413 NP_055228 C/T K558R plus 23989050 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.1 123 "HapMap,freq,cluster" 7p22 heme-regulated initiation factor 2-alpha kinase 150 rs2640 HRI 27102 7 5839691 NM_014413 NP_055228 C/T K558R plus 23989050 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "HapMap,freq,cluster" 7p22 heme-regulated initiation factor 2-alpha kinase 151 rs2640 HRI 27102 7 5839691 NM_014413 NP_055228 C/T K558R plus 23989050 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.42 123 "HapMap,freq,cluster" 7p22 heme-regulated initiation factor 2-alpha kinase 152 rs2640 HRI 27102 7 5839691 NM_014413 NP_055228 C/T K558R plus 24796328 1303 SEQUENOM CEPH CEPH (92) 184 0.04 123 "HapMap,freq,cluster" 7p22 heme-regulated initiation factor 2-alpha kinase 153 rs2759 MPO 4353 17 53703105 NM_000250 NP_000241 A/G I717V minus 2789 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 17q23.1 myeloperoxidase 154 rs2759 MPO 4353 17 53703105 NM_000250 NP_000241 A/G I717V minus 16338615 1120 WIPGA POP-WIPGA-12-05-2003 CORIELL Mixed 16 0.06 123 "by cluster,freq" 17q23.1 myeloperoxidase 155 rs2759 MPO 4353 17 53703105 NM_000250 NP_000241 A/G I717V minus 23791841 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.02 123 "by cluster,freq" 17q23.1 myeloperoxidase 156 rs2759 MPO 4353 17 53703105 NM_000250 NP_000241 A/G I717V minus 23791841 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "by cluster,freq" 17q23.1 myeloperoxidase 157 rs2759 MPO 4353 17 53703105 NM_000250 NP_000241 A/G I717V minus 23791841 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 17q23.1 myeloperoxidase 158 rs2791 TRAP1 10131 16 3648171 NM_016292 NP_057376 C/T R692H plus 2821 604 KWOK HydatidiformMoles 10 1 123 "by cluster,freq" 16p13.3 heat shock protein 75 159 rs2791 TRAP1 10131 16 3648171 NM_016292 NP_057376 C/T R692H plus 2821 1303 SEQUENOM CEPH CEPH (92) 92 0.09 123 "by cluster,freq" 16p13.3 heat shock protein 75 160 rs2791 TRAP1 10131 16 3648171 NM_016292 NP_057376 C/T R692H plus 24709278 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.06 123 "by cluster,freq" 16p13.3 heat shock protein 75 161 rs2791 TRAP1 10131 16 3648171 NM_016292 NP_057376 C/T R692H plus 24709278 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by cluster,freq" 16p13.3 heat shock protein 75 162 rs2791 TRAP1 10131 16 3648171 NM_016292 NP_057376 C/T R692H plus 24709278 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 16p13.3 heat shock protein 75 163 rs2941 GRM1 2911 6 146796825 NM_000838 NP_000829 A/G V929I plus 2972 549 KYUGEN CP CEPH (78) 156 0.11 123 "by cluster,freq" 6q24 "glutamate receptor, metabotropic 1" 164 rs2941 GRM1 2911 6 146796825 NM_000838 NP_000829 A/G V929I plus 2972 550 KYUGEN JF Japanese (53) 106 1 123 "by cluster,freq" 6q24 "glutamate receptor, metabotropic 1" 165 rs2941 GRM1 2911 6 146796825 NM_000838 NP_000829 A/G V929I plus 14796794 1303 SEQUENOM CEPH CEPH (92) 92 0.07 123 "by cluster,freq" 6q24 "glutamate receptor, metabotropic 1" 166 rs2941 GRM1 2911 6 146796825 NM_000838 NP_000829 A/G V929I plus 24796320 1303 SEQUENOM CEPH CEPH (92) 184 0.09 123 "by cluster,freq" 6q24 "glutamate receptor, metabotropic 1" 167 rs3027 COG8 84342 16 67924150 NM_032382 NP_115758 A/C L517R plus 3058 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 36 HapMap 16q22.1 component of oligomeric golgi complex 8 168 rs3027 COG8 84342 16 67924150 NM_032382 NP_115758 A/C L517R plus 3058 1303 SEQUENOM CEPH CEPH (92) 92 1 36 HapMap 16q22.1 component of oligomeric golgi complex 8 169 rs3085 CR1L 1379 1 204245649 XM_114735 XP_114735 C/T I139V minus 3116 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.17 120 "HapMap,submitter,freq,cluster" 1q32.1 complement component (3b/4b) receptor 1-like 170 rs3085 CR1L 1379 1 204245649 XM_114735 XP_114735 C/T I139V minus 16458514 1303 SEQUENOM CEPH CEPH (92) 92 0.1 120 "HapMap,submitter,freq,cluster" 1q32.1 complement component (3b/4b) receptor 1-like 171 rs3429 CCDC2 80173 9 27052721 NM_025103 NP_079379 A/G T432I minus 3464 604 KWOK HydatidiformMoles 10 0.2 123 "HapMap,doubleHit,submitter,freq,cluster" 9p21.1 coiled-coil domain containing 2 172 rs3429 CCDC2 80173 9 27052721 NM_025103 NP_079379 A/G T432I minus 3464 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.13 123 "HapMap,doubleHit,submitter,freq,cluster" 9p21.1 coiled-coil domain containing 2 173 rs3429 CCDC2 80173 9 27052721 NM_025103 NP_079379 A/G T432I minus 3464 1303 SEQUENOM CEPH CEPH (92) 92 0.32 123 "HapMap,doubleHit,submitter,freq,cluster" 9p21.1 coiled-coil domain containing 2 174 rs3429 CCDC2 80173 9 27052721 NM_025103 NP_079379 A/G T432I minus 24373978 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.13 123 "HapMap,doubleHit,submitter,freq,cluster" 9p21.1 coiled-coil domain containing 2 175 rs3429 CCDC2 80173 9 27052721 NM_025103 NP_079379 A/G T432I minus 24373978 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "HapMap,doubleHit,submitter,freq,cluster" 9p21.1 coiled-coil domain containing 2 176 rs3429 CCDC2 80173 9 27052721 NM_025103 NP_079379 A/G T432I minus 24373978 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.02 123 "HapMap,doubleHit,submitter,freq,cluster" 9p21.1 coiled-coil domain containing 2 177 rs3501 PAXIP1L 22976 7 154176057 NM_007349 NP_031375 A/G M979V minus 3536 604 KWOK HydatidiformMoles 10 0.4 100 "HapMap,submitter,freq,cluster" 7q36 PAX transcription activation domain interacting protein 1 like 178 rs3501 PAXIP1L 22976 7 154176057 NM_007349 NP_031375 A/G M979V minus 3536 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.26 100 "HapMap,submitter,freq,cluster" 7q36 PAX transcription activation domain interacting protein 1 like 179 rs3501 PAXIP1L 22976 7 154176057 NM_007349 NP_031375 A/G M979V minus 3536 1303 SEQUENOM CEPH CEPH (92) 92 0.26 100 "HapMap,submitter,freq,cluster" 7q36 PAX transcription activation domain interacting protein 1 like 180 rs3575 LDHB 3945 12 21679867 NM_002300 NP_002291 C/T C294Y plus 24811306 1303 SEQUENOM CEPH CEPH (92) 184 0.41 123 "by cluster,freq" 12p12.2-p12.1 lactate dehydrogenase B 181 rs3625 JDP2 122953 14 74974413 NM_130469 NP_569736 A/G T13A plus 10757052 1303 SEQUENOM CEPH CEPH (92) 92 0.39 123 "by doubleHit,submitter,freq,cluster" 14q24.3 jun dimerization protein 2 182 rs3625 JDP2 122953 14 74974413 NM_130469 NP_569736 A/G T13A plus 24606853 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.48 123 "by doubleHit,submitter,freq,cluster" 14q24.3 jun dimerization protein 2 183 rs3625 JDP2 122953 14 74974413 NM_130469 NP_569736 A/G T13A plus 24606853 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.28 123 "by doubleHit,submitter,freq,cluster" 14q24.3 jun dimerization protein 2 184 rs3625 JDP2 122953 14 74974413 NM_130469 NP_569736 A/G T13A plus 24606853 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.29 123 "by doubleHit,submitter,freq,cluster" 14q24.3 jun dimerization protein 2 185 rs4220 FGB 2244 4 155849364 NM_005141 NP_005132 A/G R478K plus 7674 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.33 120 "by doubleHit,freq,cluster" 4q28 "fibrinogen, B beta polypeptide" 186 rs4220 FGB 2244 4 155849364 NM_005141 NP_005132 A/G R478K plus 3171963 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.06 120 "by doubleHit,freq,cluster" 4q28 "fibrinogen, B beta polypeptide" 187 rs4220 FGB 2244 4 155849364 NM_005141 NP_005132 A/G R478K plus 3171963 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.2 120 "by doubleHit,freq,cluster" 4q28 "fibrinogen, B beta polypeptide" 188 rs4220 FGB 2244 4 155849364 NM_005141 NP_005132 A/G R478K plus 3171963 1303 SEQUENOM CEPH CEPH (92) 92 0.28 120 "by doubleHit,freq,cluster" 4q28 "fibrinogen, B beta polypeptide" 189 rs4220 FGB 2244 4 155849364 NM_005141 NP_005132 A/G R478K plus 3249988 738 YUSUKE JBIC-ALLELE Japanese (752) 1490 0.14 120 "by doubleHit,freq,cluster" 4q28 "fibrinogen, B beta polypeptide" 190 rs4236 MGP 4256 12 14926348 NM_000900 NP_000891 A/G T102A minus 9261 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.45 123 "HapMap,doubleHit,freq,cluster" 12p13.1-p12.3 matrix Gla protein 191 rs4236 MGP 4256 12 14926348 NM_000900 NP_000891 A/G T102A minus 3176882 619 WICVAR MITOGPOP6 CORIELL Mixed 10 0.3 123 "HapMap,doubleHit,freq,cluster" 12p13.1-p12.3 matrix Gla protein 192 rs4236 MGP 4256 12 14926348 NM_000900 NP_000891 A/G T102A minus 3405897 885 TSC-CSHL HapMap-CEPH-30-trios 116 0.36 123 "HapMap,doubleHit,freq,cluster" 12p13.1-p12.3 matrix Gla protein 193 rs4236 MGP 4256 12 14926348 NM_000900 NP_000891 A/G T102A minus 3405897 1303 SEQUENOM CEPH CEPH (92) 92 0.45 123 "HapMap,doubleHit,freq,cluster" 12p13.1-p12.3 matrix Gla protein 194 rs4277 CRYBA4 1413 22 25346091 NM_001886 NP_001877 C/T T84M plus 4652 3 KWOK C USA Caucasian (30) 60 0.05 36 HapMap 22q12.1 "crystallin, beta A4" 195 rs4277 CRYBA4 1413 22 25346091 NM_001886 NP_001877 C/T T84M plus 4652 4 KWOK H USA Hispanic (30) 60 0.05 36 HapMap 22q12.1 "crystallin, beta A4" 196 rs4277 CRYBA4 1413 22 25346091 NM_001886 NP_001877 C/T T84M plus 4652 5 KWOK B USA African-American (30) 60 0.05 36 HapMap 22q12.1 "crystallin, beta A4" 197 rs4277 CRYBA4 1413 22 25346091 NM_001886 NP_001877 C/T T84M plus 4652 7 KWOK A Chinese (30) 60 0.05 36 HapMap 22q12.1 "crystallin, beta A4" 198 rs4277 CRYBA4 1413 22 25346091 NM_001886 NP_001877 C/T T84M plus 4652 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 36 HapMap 22q12.1 "crystallin, beta A4" 199 rs4277 CRYBA4 1413 22 25346091 NM_001886 NP_001877 C/T T84M plus 4652 1303 SEQUENOM CEPH CEPH (92) 93 0.03 36 HapMap 22q12.1 "crystallin, beta A4" 200 rs4303 ACE 1636 17 58911555 NM_000789 NP_000780 G/T A261S plus 4692 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 201 rs4303 ACE 1636 17 58911555 NM_000789 NP_000780 G/T A261S plus 20418732 889 PHARMGKB_PARC PA128275074 92 0.03 123 by freq 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 202 rs4317 ACE 1636 17 58916054 NM_152830 NP_690043 C/T S32P plus 6407 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.25 52 "by cluster,freq" 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 203 rs4317 ACE 1636 17 58916054 NM_152830 NP_690043 C/T S32P plus 6407 1303 SEQUENOM CEPH CEPH (92) 92 1 52 "by cluster,freq" 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 204 rs4317 ACE 1636 17 58916054 NM_152831 NP_690044 C/T S32P plus 6407 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.25 52 "by cluster,freq" 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 205 rs4317 ACE 1636 17 58916054 NM_152831 NP_690044 C/T S32P plus 6407 1303 SEQUENOM CEPH CEPH (92) 92 1 52 "by cluster,freq" 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 206 rs4364 ACE 1636 17 58928394 NM_000789 NP_000780 A/C R1286S plus 6418 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 121 "by cluster,freq" 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 207 rs4364 ACE 1636 17 58928394 NM_000789 NP_000780 A/C R1286S plus 20418774 889 PHARMGKB_PARC PA128275074 94 0.07 121 "by cluster,freq" 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 208 rs4364 ACE 1636 17 58928394 NM_000789 NP_000780 A/C R1286S plus 20418774 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "by cluster,freq" 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 209 rs4364 ACE 1636 17 58928394 NM_152830 NP_690043 A/C R712S plus 6418 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 121 "by cluster,freq" 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 210 rs4364 ACE 1636 17 58928394 NM_152830 NP_690043 A/C R712S plus 20418774 889 PHARMGKB_PARC PA128275074 94 0.07 121 "by cluster,freq" 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 211 rs4364 ACE 1636 17 58928394 NM_152830 NP_690043 A/C R712S plus 20418774 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "by cluster,freq" 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 212 rs4524 F5 2153 1 166243413 NM_000130 NP_000121 A/G K858R minus 7631 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 104 0.33 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 213 rs4524 F5 2153 1 166243413 NM_000130 NP_000121 A/G K858R minus 3195262 738 YUSUKE JBIC-ALLELE Japanese (752) 750 0.21 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 214 rs4524 F5 2153 1 166243413 NM_000130 NP_000121 A/G K858R minus 12674294 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.27 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 215 rs4524 F5 2153 1 166243413 NM_000130 NP_000121 A/G K858R minus 12674294 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 42 0.21 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 216 rs4524 F5 2153 1 166243413 NM_000130 NP_000121 A/G K858R minus 12674294 1303 SEQUENOM CEPH CEPH (92) 92 0.08 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 217 rs4525 F5 2153 1 166243392 NM_000130 NP_000121 A/G H865R minus 7635 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.33 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 218 rs4525 F5 2153 1 166243392 NM_000130 NP_000121 A/G H865R minus 3195261 738 YUSUKE JBIC-ALLELE Japanese (752) 1492 0.24 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 219 rs4525 F5 2153 1 166243392 NM_000130 NP_000121 A/G H865R minus 12674295 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.27 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 220 rs4525 F5 2153 1 166243392 NM_000130 NP_000121 A/G H865R minus 12674295 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 42 0.21 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 221 rs4525 F5 2153 1 166243392 NM_000130 NP_000121 A/G H865R minus 12674295 1303 SEQUENOM CEPH CEPH (92) 92 0.42 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 222 rs4526 TBXAS1 6916 7 139168765 NM_001061 NP_001052 A/G A430T plus 7234 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 223 rs4526 TBXAS1 6916 7 139168765 NM_001061 NP_001052 A/G A430T plus 7757 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 224 rs4526 TBXAS1 6916 7 139168765 NM_001061 NP_001052 A/G A430T plus 7757 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 225 rs4526 TBXAS1 6916 7 139168765 NM_001061 NP_001052 A/G A430T plus 23537402 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 1 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 226 rs4526 TBXAS1 6916 7 139168765 NM_001061 NP_001052 A/G A430T plus 23537402 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.05 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 227 rs4526 TBXAS1 6916 7 139168765 NM_001061 NP_001052 A/G A430T plus 23537402 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 1 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 228 rs4526 TBXAS1 6916 7 139168765 NM_030984 NP_112246 A/G A430T plus 7234 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 229 rs4526 TBXAS1 6916 7 139168765 NM_030984 NP_112246 A/G A430T plus 7757 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 230 rs4526 TBXAS1 6916 7 139168765 NM_030984 NP_112246 A/G A430T plus 7757 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 231 rs4526 TBXAS1 6916 7 139168765 NM_030984 NP_112246 A/G A430T plus 23537402 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 1 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 232 rs4526 TBXAS1 6916 7 139168765 NM_030984 NP_112246 A/G A430T plus 23537402 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.05 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 233 rs4526 TBXAS1 6916 7 139168765 NM_030984 NP_112246 A/G A430T plus 23537402 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 1 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 234 rs4529 TBXAS1 6916 7 139115148 NM_001061 NP_001052 C/G L357V plus 7245 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 123 "HapMap,freq,cluster" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 235 rs4529 TBXAS1 6916 7 139115148 NM_001061 NP_001052 C/G L357V plus 7761 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 102 0.03 123 "HapMap,freq,cluster" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 236 rs4529 TBXAS1 6916 7 139115148 NM_001061 NP_001052 C/G L357V plus 7761 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 123 "HapMap,freq,cluster" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 237 rs4529 TBXAS1 6916 7 139115148 NM_001061 NP_001052 C/G L357V plus 7761 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "HapMap,freq,cluster" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 238 rs4529 TBXAS1 6916 7 139115148 NM_001061 NP_001052 C/G L357V plus 23536737 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "HapMap,freq,cluster" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 239 rs4529 TBXAS1 6916 7 139115148 NM_001061 NP_001052 C/G L357V plus 23536737 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "HapMap,freq,cluster" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 240 rs4529 TBXAS1 6916 7 139115148 NM_001061 NP_001052 C/G L357V plus 23536737 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,freq,cluster" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 241 rs4529 TBXAS1 6916 7 139115148 NM_030984 NP_112246 C/G L357V plus 7245 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 123 "HapMap,freq,cluster" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 242 rs4529 TBXAS1 6916 7 139115148 NM_030984 NP_112246 C/G L357V plus 7761 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 102 0.03 123 "HapMap,freq,cluster" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 243 rs4529 TBXAS1 6916 7 139115148 NM_030984 NP_112246 C/G L357V plus 7761 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 123 "HapMap,freq,cluster" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 244 rs4529 TBXAS1 6916 7 139115148 NM_030984 NP_112246 C/G L357V plus 7761 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "HapMap,freq,cluster" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 245 rs4529 TBXAS1 6916 7 139115148 NM_030984 NP_112246 C/G L357V plus 23536737 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "HapMap,freq,cluster" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 246 rs4529 TBXAS1 6916 7 139115148 NM_030984 NP_112246 C/G L357V plus 23536737 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "HapMap,freq,cluster" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 247 rs4529 TBXAS1 6916 7 139115148 NM_030984 NP_112246 C/G L357V plus 23536737 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,freq,cluster" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 248 rs4530 ADORA2A 135 22 23154075 NM_000675 NP_000666 C/T A50V plus 6429 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "HapMap,freq,cluster" 22q11.23 adenosine A2a receptor 249 rs4530 ADORA2A 135 22 23154075 NM_000675 NP_000666 C/T A50V plus 7888 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.03 123 "HapMap,freq,cluster" 22q11.23 adenosine A2a receptor 250 rs4530 ADORA2A 135 22 23154075 NM_000675 NP_000666 C/T A50V plus 7888 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 123 "HapMap,freq,cluster" 22q11.23 adenosine A2a receptor 251 rs4530 ADORA2A 135 22 23154075 NM_000675 NP_000666 C/T A50V plus 7888 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "HapMap,freq,cluster" 22q11.23 adenosine A2a receptor 252 rs4530 ADORA2A 135 22 23154075 NM_000675 NP_000666 C/T A50V plus 23584256 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "HapMap,freq,cluster" 22q11.23 adenosine A2a receptor 253 rs4530 ADORA2A 135 22 23154075 NM_000675 NP_000666 C/T A50V plus 23584256 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "HapMap,freq,cluster" 22q11.23 adenosine A2a receptor 254 rs4530 ADORA2A 135 22 23154075 NM_000675 NP_000666 C/T A50V plus 23584256 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,freq,cluster" 22q11.23 adenosine A2a receptor 255 rs4531 DBH 1621 9 133538924 NM_000787 NP_000778 G/T A304S plus 6788 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.1 121 "by cluster,freq" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 256 rs4531 DBH 1621 9 133538924 NM_000787 NP_000778 G/T A304S plus 7897 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 70 0.1 121 "by cluster,freq" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 257 rs4531 DBH 1621 9 133538924 NM_000787 NP_000778 G/T A304S plus 6312556 583 KIDDLAB PO000020C 184 0.07 121 "by cluster,freq" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 258 rs4531 DBH 1621 9 133538924 NM_000787 NP_000778 G/T A304S plus 6312556 827 KIDDLAB PO000008I 242 0.05 121 "by cluster,freq" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 259 rs4531 DBH 1621 9 133538924 NM_000787 NP_000778 G/T A304S plus 22887000 1303 SEQUENOM CEPH CEPH (92) 92 0.09 121 "by cluster,freq" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 260 rs4534 CYP11B1 1584 8 143958104 NM_000497 NP_000488 A/G R43Q minus 6729 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by doubleHit,freq,cluster" 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 261 rs4534 CYP11B1 1584 8 143958104 NM_000497 NP_000488 A/G R43Q minus 8040 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.1 123 "by doubleHit,freq,cluster" 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 262 rs4534 CYP11B1 1584 8 143958104 NM_000497 NP_000488 A/G R43Q minus 2984306 738 YUSUKE JBIC-ALLELE Japanese (752) 1276 0.43 123 "by doubleHit,freq,cluster" 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 263 rs4534 CYP11B1 1584 8 143958104 NM_000497 NP_000488 A/G R43Q minus 6529220 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by doubleHit,freq,cluster" 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 264 rs4534 CYP11B1 1584 8 143958104 NM_000497 NP_000488 A/G R43Q minus 24054239 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by doubleHit,freq,cluster" 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 265 rs4534 CYP11B1 1584 8 143958104 NM_000497 NP_000488 A/G R43Q minus 24054239 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "by doubleHit,freq,cluster" 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 266 rs4534 CYP11B1 1584 8 143958104 NM_000497 NP_000488 A/G R43Q minus 24054239 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.46 123 "by doubleHit,freq,cluster" 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 267 rs4537 CYP11B2 1585 8 143992794 NM_000498 NP_000489 A/G N281S minus 6765 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 268 rs4537 CYP11B2 1585 8 143992794 NM_000498 NP_000489 A/G N281S minus 8076 1303 SEQUENOM CEPH CEPH (92) 92 1 52 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 269 rs4539 CYP11B2 1585 8 143993541 NM_000498 NP_000489 A/G K173R minus 6759 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.3 52 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 270 rs4539 CYP11B2 1585 8 143993541 NM_000498 NP_000489 A/G K173R minus 8079 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.33 52 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 271 rs4539 CYP11B2 1585 8 143993541 NM_000498 NP_000489 A/G K173R minus 8079 1303 SEQUENOM CEPH CEPH (92) 92 1 52 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 272 rs4541 CYP11B1 1584 8 143953695 NM_000497 NP_000488 C/T A386V minus 6772 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 120 "by doubleHit,freq,cluster" 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 273 rs4541 CYP11B1 1584 8 143953695 NM_000497 NP_000488 C/T A386V minus 8047 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.33 120 "by doubleHit,freq,cluster" 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 274 rs4541 CYP11B1 1584 8 143953695 NM_000497 NP_000488 C/T A386V minus 8084 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.33 120 "by doubleHit,freq,cluster" 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 275 rs4544 CYP11B2 1585 8 143991808 NM_000498 NP_000489 C/T I339T minus 6768 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 40 0.5 123 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 276 rs4544 CYP11B2 1585 8 143991808 NM_000498 NP_000489 C/T I339T minus 8088 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 80 0.33 123 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 277 rs4544 CYP11B2 1585 8 143991808 NM_000498 NP_000489 C/T I339T minus 8088 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 278 rs4544 CYP11B2 1585 8 143991808 NM_000498 NP_000489 C/T I339T minus 23523520 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 279 rs4544 CYP11B2 1585 8 143991808 NM_000498 NP_000489 C/T I339T minus 23523520 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.4 123 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 280 rs4544 CYP11B2 1585 8 143991808 NM_000498 NP_000489 C/T I339T minus 23523520 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 281 rs4545 CYP11B2 1585 8 143991043 NM_000498 NP_000489 A/G G435S minus 6776 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 120 "by doubleHit,freq,cluster" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 282 rs4545 CYP11B2 1585 8 143991043 NM_000498 NP_000489 A/G G435S minus 8089 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 82 0.33 120 "by doubleHit,freq,cluster" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 283 rs4545 CYP11B2 1585 8 143991043 NM_000498 NP_000489 A/G G435S minus 6529238 1303 SEQUENOM CEPH CEPH (92) 92 1 120 "by doubleHit,freq,cluster" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 284 rs4562 CLDN7 1366 17 7104463 NM_001307 NP_001298 A/G V197A plus 8465 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.32 120 "by doubleHit,freq,cluster" 17p13 claudin 7 285 rs4562 CLDN7 1366 17 7104463 NM_001307 NP_001298 A/G V197A plus 606039 1303 SEQUENOM CEPH CEPH (92) 92 0.32 120 "by doubleHit,freq,cluster" 17p13 claudin 7 286 rs4588 GC 2638 4 72983358 NM_000583 NP_000574 A/C T436K minus 8817 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.3 123 "by cluster,freq" 4q12-q13 group-specific component (vitamin D binding protein) 287 rs4588 GC 2638 4 72983358 NM_000583 NP_000574 A/C T436K minus 6903803 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.22 123 "by cluster,freq" 4q12-q13 group-specific component (vitamin D binding protein) 288 rs4588 GC 2638 4 72983358 NM_000583 NP_000574 A/C T436K minus 6903803 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.23 123 "by cluster,freq" 4q12-q13 group-specific component (vitamin D binding protein) 289 rs4588 GC 2638 4 72983358 NM_000583 NP_000574 A/C T436K minus 6903803 776 SNP500CANCER AFR1 African / African-American (24) 48 0.15 123 "by cluster,freq" 4q12-q13 group-specific component (vitamin D binding protein) 290 rs4588 GC 2638 4 72983358 NM_000583 NP_000574 A/C T436K minus 6903803 777 SNP500CANCER HISP1 Hispanic (23) 46 0.2 123 "by cluster,freq" 4q12-q13 group-specific component (vitamin D binding protein) 291 rs4588 GC 2638 4 72983358 NM_000583 NP_000574 A/C T436K minus 6903803 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.29 123 "by cluster,freq" 4q12-q13 group-specific component (vitamin D binding protein) 292 rs4588 GC 2638 4 72983358 NM_000583 NP_000574 A/C T436K minus 6903803 1303 SEQUENOM CEPH CEPH (92) 92 0.3 123 "by cluster,freq" 4q12-q13 group-specific component (vitamin D binding protein) 293 rs4588 GC 2638 4 72983358 NM_000583 NP_000574 A/C T436K minus 24796216 1303 SEQUENOM CEPH CEPH (92) 184 0.4 123 "by cluster,freq" 4q12-q13 group-specific component (vitamin D binding protein) 294 rs4602 KRT19 3880 17 36937847 NM_002276 NP_002267 C/G A60G minus 8962 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.37 123 "by doubleHit,freq" 17q21.2 keratin 19 295 rs4602 KRT19 3880 17 36937847 NM_002276 NP_002267 C/G A60G minus 8962 1303 SEQUENOM CEPH CEPH (92) 92 0.34 123 "by doubleHit,freq" 17q21.2 keratin 19 296 rs4602 KRT19 3880 17 36937847 NM_002276 NP_002267 C/G A60G minus 23597995 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.23 123 "by doubleHit,freq" 17q21.2 keratin 19 297 rs4602 KRT19 3880 17 36937847 NM_002276 NP_002267 C/G A60G minus 23597995 1372 PERLEGEN AFD_AFR_PANEL African American (24) 40 0.28 123 "by doubleHit,freq" 17q21.2 keratin 19 298 rs4602 KRT19 3880 17 36937847 NM_002276 NP_002267 C/G A60G minus 23597995 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.04 123 "by doubleHit,freq" 17q21.2 keratin 19 299 rs4619 IGFBP1 3484 7 45705909 NM_000596 NP_000587 A/G I253M plus 9319 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.36 123 "HapMap,doubleHit,submitter,freq,cluster" 7p13-p12 insulin-like growth factor binding protein 1 300 rs4619 IGFBP1 3484 7 45705909 NM_000596 NP_000587 A/G I253M plus 2965913 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 7p13-p12 insulin-like growth factor binding protein 1 301 rs4619 IGFBP1 3484 7 45705909 NM_000596 NP_000587 A/G I253M plus 2965913 1303 SEQUENOM CEPH CEPH (92) 92 0.36 123 "HapMap,doubleHit,submitter,freq,cluster" 7p13-p12 insulin-like growth factor binding protein 1 302 rs4619 IGFBP1 3484 7 45705909 NM_000596 NP_000587 A/G I253M plus 13452540 693 EGP_SNPS PDR90 NIHPDR 180 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 7p13-p12 insulin-like growth factor binding protein 1 303 rs4619 IGFBP1 3484 7 45705909 NM_000596 NP_000587 A/G I253M plus 23455231 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.29 123 "HapMap,doubleHit,submitter,freq,cluster" 7p13-p12 insulin-like growth factor binding protein 1 304 rs4619 IGFBP1 3484 7 45705909 NM_000596 NP_000587 A/G I253M plus 23455231 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 7p13-p12 insulin-like growth factor binding protein 1 305 rs4619 IGFBP1 3484 7 45705909 NM_000596 NP_000587 A/G I253M plus 23455231 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 7p13-p12 insulin-like growth factor binding protein 1 306 rs4644 LGALS3 3958 14 54674688 NM_002306 NP_002297 A/C P64H plus 9801 1303 SEQUENOM CEPH CEPH (92) 92 0.08 123 "by cluster,freq" 14q21-q22 "lectin, galactoside-binding, soluble, 3 (galectin 3)" 307 rs4644 LGALS3 3958 14 54674688 NM_002306 NP_002297 A/C P64H plus 24615984 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.46 123 "by cluster,freq" 14q21-q22 "lectin, galactoside-binding, soluble, 3 (galectin 3)" 308 rs4644 LGALS3 3958 14 54674688 NM_002306 NP_002297 A/C P64H plus 24615984 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.3 123 "by cluster,freq" 14q21-q22 "lectin, galactoside-binding, soluble, 3 (galectin 3)" 309 rs4644 LGALS3 3958 14 54674688 NM_002306 NP_002297 A/C P64H plus 24615984 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 42 0.14 123 "by cluster,freq" 14q21-q22 "lectin, galactoside-binding, soluble, 3 (galectin 3)" 310 rs4652 LGALS3 3958 14 54674789 NM_002306 NP_002297 A/C T98P plus 10155 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.45 120 "by doubleHit,freq,cluster" 14q21-q22 "lectin, galactoside-binding, soluble, 3 (galectin 3)" 311 rs4652 LGALS3 3958 14 54674789 NM_002306 NP_002297 A/C T98P plus 10741054 1303 SEQUENOM CEPH CEPH (92) 92 0.49 120 "by doubleHit,freq,cluster" 14q21-q22 "lectin, galactoside-binding, soluble, 3 (galectin 3)" 312 rs4660 SPP1 6696 4 89261184 NM_000582 NP_000573 A/G R287H plus 10351 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.13 123 by freq 4q21-q25 "secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)" 313 rs4660 SPP1 6696 4 89261184 NM_000582 NP_000573 A/G R287H plus 10351 1303 SEQUENOM CEPH CEPH (92) 92 0.13 123 by freq 4q21-q25 "secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)" 314 rs4660 SPP1 6696 4 89261184 NM_000582 NP_000573 A/G R287H plus 23234837 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 1 123 by freq 4q21-q25 "secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)" 315 rs4660 SPP1 6696 4 89261184 NM_000582 NP_000573 A/G R287H plus 23234837 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.17 123 by freq 4q21-q25 "secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)" 316 rs4660 SPP1 6696 4 89261184 NM_000582 NP_000573 A/G R287H plus 23234837 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 by freq 4q21-q25 "secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)" 317 rs4667 OAZ1 4946 19 2220692 NM_004152 NP_004143 G/T R32L plus 10624 1303 SEQUENOM CEPH CEPH (92) 92 1 120 by doubleHit 19p13.3 ornithine decarboxylase antizyme 1 318 rs4673 CYBA 1535 16 87240737 NM_000101 NP_000092 C/T Y72H minus 9045 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.5 123 "HapMap,doubleHit,freq,cluster" 16q24 "cytochrome b-245, alpha polypeptide" 319 rs4673 CYBA 1535 16 87240737 NM_000101 NP_000092 C/T Y72H minus 3173156 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 44 0.43 123 "HapMap,doubleHit,freq,cluster" 16q24 "cytochrome b-245, alpha polypeptide" 320 rs4673 CYBA 1535 16 87240737 NM_000101 NP_000092 C/T Y72H minus 3198503 738 YUSUKE JBIC-ALLELE Japanese (752) 1480 0.09 123 "HapMap,doubleHit,freq,cluster" 16q24 "cytochrome b-245, alpha polypeptide" 321 rs4673 CYBA 1535 16 87240737 NM_000101 NP_000092 C/T Y72H minus 6598678 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.34 123 "HapMap,doubleHit,freq,cluster" 16q24 "cytochrome b-245, alpha polypeptide" 322 rs4673 CYBA 1535 16 87240737 NM_000101 NP_000092 C/T Y72H minus 6598678 1303 SEQUENOM CEPH CEPH (92) 46 0.5 123 "HapMap,doubleHit,freq,cluster" 16q24 "cytochrome b-245, alpha polypeptide" 323 rs4673 CYBA 1535 16 87240737 NM_000101 NP_000092 C/T Y72H minus 6903734 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.29 123 "HapMap,doubleHit,freq,cluster" 16q24 "cytochrome b-245, alpha polypeptide" 324 rs4673 CYBA 1535 16 87240737 NM_000101 NP_000092 C/T Y72H minus 6903734 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 123 "HapMap,doubleHit,freq,cluster" 16q24 "cytochrome b-245, alpha polypeptide" 325 rs4673 CYBA 1535 16 87240737 NM_000101 NP_000092 C/T Y72H minus 6903734 776 SNP500CANCER AFR1 African / African-American (24) 48 0.46 123 "HapMap,doubleHit,freq,cluster" 16q24 "cytochrome b-245, alpha polypeptide" 326 rs4673 CYBA 1535 16 87240737 NM_000101 NP_000092 C/T Y72H minus 6903734 777 SNP500CANCER HISP1 Hispanic (23) 46 0.22 123 "HapMap,doubleHit,freq,cluster" 16q24 "cytochrome b-245, alpha polypeptide" 327 rs4673 CYBA 1535 16 87240737 NM_000101 NP_000092 C/T Y72H minus 6903734 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.17 123 "HapMap,doubleHit,freq,cluster" 16q24 "cytochrome b-245, alpha polypeptide" 328 rs4673 CYBA 1535 16 87240737 NM_000101 NP_000092 C/T Y72H minus 23779281 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.33 123 "HapMap,doubleHit,freq,cluster" 16q24 "cytochrome b-245, alpha polypeptide" 329 rs4673 CYBA 1535 16 87240737 NM_000101 NP_000092 C/T Y72H minus 23779281 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "HapMap,doubleHit,freq,cluster" 16q24 "cytochrome b-245, alpha polypeptide" 330 rs4673 CYBA 1535 16 87240737 NM_000101 NP_000092 C/T Y72H minus 23779281 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.06 123 "HapMap,doubleHit,freq,cluster" 16q24 "cytochrome b-245, alpha polypeptide" 331 rs4680 COMT 1312 22 18325825 NM_000754 NP_000745 A/G V158M plus 869771 506 NCBI NIHPDR NIHPDR 74 0.34 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 332 rs4680 COMT 1312 22 18325825 NM_000754 NP_000745 A/G V158M plus 4933092 738 YUSUKE JBIC-ALLELE Japanese (752) 1292 0.32 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 333 rs4680 COMT 1312 22 18325825 NM_000754 NP_000745 A/G V158M plus 5586357 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.39 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 334 rs4680 COMT 1312 22 18325825 NM_000754 NP_000745 A/G V158M plus 5586357 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.47 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 335 rs4680 COMT 1312 22 18325825 NM_000754 NP_000745 A/G V158M plus 5586357 776 SNP500CANCER AFR1 African / African-American (24) 48 0.23 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 336 rs4680 COMT 1312 22 18325825 NM_000754 NP_000745 A/G V158M plus 5586357 777 SNP500CANCER HISP1 Hispanic (23) 46 0.46 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 337 rs4680 COMT 1312 22 18325825 NM_000754 NP_000745 A/G V158M plus 5586357 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.31 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 338 rs4680 COMT 1312 22 18325825 NM_000754 NP_000745 A/G V158M plus 6312623 583 KIDDLAB PO000020C 186 0.38 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 339 rs4680 COMT 1312 22 18325825 NM_000754 NP_000745 A/G V158M plus 12673767 693 EGP_SNPS PDR90 NIHPDR 164 0.39 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 340 rs4680 COMT 1312 22 18325825 NM_000754 NP_000745 A/G V158M plus 12673767 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.48 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 341 rs4680 COMT 1312 22 18325825 NM_000754 NP_000745 A/G V158M plus 16341321 1166 PHARMGKB_PPII PA128747821 240 0.36 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 342 rs4680 COMT 1312 22 18325825 NM_000754 NP_000745 A/G V158M plus 24702135 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.38 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 343 rs4680 COMT 1312 22 18325825 NM_000754 NP_000745 A/G V158M plus 24702135 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.33 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 344 rs4680 COMT 1312 22 18325825 NM_000754 NP_000745 A/G V158M plus 24702135 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 345 rs4680 COMT 1312 22 18325825 NM_007310 NP_009294 A/G V108M plus 869771 506 NCBI NIHPDR NIHPDR 74 0.34 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 346 rs4680 COMT 1312 22 18325825 NM_007310 NP_009294 A/G V108M plus 4933092 738 YUSUKE JBIC-ALLELE Japanese (752) 1292 0.32 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 347 rs4680 COMT 1312 22 18325825 NM_007310 NP_009294 A/G V108M plus 5586357 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.39 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 348 rs4680 COMT 1312 22 18325825 NM_007310 NP_009294 A/G V108M plus 5586357 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.47 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 349 rs4680 COMT 1312 22 18325825 NM_007310 NP_009294 A/G V108M plus 5586357 776 SNP500CANCER AFR1 African / African-American (24) 48 0.23 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 350 rs4680 COMT 1312 22 18325825 NM_007310 NP_009294 A/G V108M plus 5586357 777 SNP500CANCER HISP1 Hispanic (23) 46 0.46 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 351 rs4680 COMT 1312 22 18325825 NM_007310 NP_009294 A/G V108M plus 5586357 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.31 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 352 rs4680 COMT 1312 22 18325825 NM_007310 NP_009294 A/G V108M plus 6312623 583 KIDDLAB PO000020C 186 0.38 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 353 rs4680 COMT 1312 22 18325825 NM_007310 NP_009294 A/G V108M plus 12673767 693 EGP_SNPS PDR90 NIHPDR 164 0.39 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 354 rs4680 COMT 1312 22 18325825 NM_007310 NP_009294 A/G V108M plus 12673767 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.48 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 355 rs4680 COMT 1312 22 18325825 NM_007310 NP_009294 A/G V108M plus 16341321 1166 PHARMGKB_PPII PA128747821 240 0.36 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 356 rs4680 COMT 1312 22 18325825 NM_007310 NP_009294 A/G V108M plus 24702135 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.38 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 357 rs4680 COMT 1312 22 18325825 NM_007310 NP_009294 A/G V108M plus 24702135 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.33 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 358 rs4680 COMT 1312 22 18325825 NM_007310 NP_009294 A/G V108M plus 24702135 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "HapMap,doubleHit,freq,cluster" 22q11.21 catechol-O-methyltransferase 359 rs4740 EBI3 10148 19 4187996 NM_005755 NP_005746 A/G V201I plus 13009 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.41 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 Epstein-Barr virus induced gene 3 360 rs4740 EBI3 10148 19 4187996 NM_005755 NP_005746 A/G V201I plus 88814 771 TSC-CSHL SC_12_A CORIELL Asian (12) 18 0.28 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 Epstein-Barr virus induced gene 3 361 rs4740 EBI3 10148 19 4187996 NM_005755 NP_005746 A/G V201I plus 88814 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 Epstein-Barr virus induced gene 3 362 rs4740 EBI3 10148 19 4187996 NM_005755 NP_005746 A/G V201I plus 88814 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 20 0.25 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 Epstein-Barr virus induced gene 3 363 rs4740 EBI3 10148 19 4187996 NM_005755 NP_005746 A/G V201I plus 88814 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 88 0.28 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 Epstein-Barr virus induced gene 3 364 rs4740 EBI3 10148 19 4187996 NM_005755 NP_005746 A/G V201I plus 1968400 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 Epstein-Barr virus induced gene 3 365 rs4740 EBI3 10148 19 4187996 NM_005755 NP_005746 A/G V201I plus 1968400 1303 SEQUENOM CEPH CEPH (92) 92 0.41 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 Epstein-Barr virus induced gene 3 366 rs4740 EBI3 10148 19 4187996 NM_005755 NP_005746 A/G V201I plus 24191234 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.29 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 Epstein-Barr virus induced gene 3 367 rs4740 EBI3 10148 19 4187996 NM_005755 NP_005746 A/G V201I plus 24191234 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.28 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 Epstein-Barr virus induced gene 3 368 rs4740 EBI3 10148 19 4187996 NM_005755 NP_005746 A/G V201I plus 24191234 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 Epstein-Barr virus induced gene 3 369 rs4756 ZNF42 7593 19 63766465 NM_003422 NP_003413 A/G I331V minus 3172814 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 44 0.48 120 "HapMap,freq,cluster" 19q13.2-q13.4 zinc finger protein 42 (myeloid-specific retinoic acid-responsive) 370 rs4756 ZNF42 7593 19 63766465 NM_003422 NP_003413 A/G I331V minus 4950563 738 YUSUKE JBIC-ALLELE Japanese (752) 884 0.18 120 "HapMap,freq,cluster" 19q13.2-q13.4 zinc finger protein 42 (myeloid-specific retinoic acid-responsive) 371 rs4756 ZNF42 7593 19 63766465 NM_003422 NP_003413 A/G I331V minus 16809037 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.23 120 "HapMap,freq,cluster" 19q13.2-q13.4 zinc finger protein 42 (myeloid-specific retinoic acid-responsive) 372 rs4756 ZNF42 7593 19 63766465 NM_003422 NP_003413 A/G I331V minus 16809037 1303 SEQUENOM CEPH CEPH (92) 92 0.02 120 "HapMap,freq,cluster" 19q13.2-q13.4 zinc finger protein 42 (myeloid-specific retinoic acid-responsive) 373 rs4756 ZNF42 7593 19 63766465 NM_198055 NP_932172 A/G I331V minus 3172814 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 44 0.48 120 "HapMap,freq,cluster" 19q13.2-q13.4 zinc finger protein 42 (myeloid-specific retinoic acid-responsive) 374 rs4756 ZNF42 7593 19 63766465 NM_198055 NP_932172 A/G I331V minus 4950563 738 YUSUKE JBIC-ALLELE Japanese (752) 884 0.18 120 "HapMap,freq,cluster" 19q13.2-q13.4 zinc finger protein 42 (myeloid-specific retinoic acid-responsive) 375 rs4756 ZNF42 7593 19 63766465 NM_198055 NP_932172 A/G I331V minus 16809037 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.23 120 "HapMap,freq,cluster" 19q13.2-q13.4 zinc finger protein 42 (myeloid-specific retinoic acid-responsive) 376 rs4756 ZNF42 7593 19 63766465 NM_198055 NP_932172 A/G I331V minus 16809037 1303 SEQUENOM CEPH CEPH (92) 92 0.02 120 "HapMap,freq,cluster" 19q13.2-q13.4 zinc finger protein 42 (myeloid-specific retinoic acid-responsive) 377 rs4760 PLAUR 5329 19 48844940 NM_002659 NP_002650 C/T L317P minus 10984 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.11 121 "by doubleHit,freq,cluster" 19q13 "plasminogen activator, urokinase receptor" 378 rs4760 PLAUR 5329 19 48844940 NM_002659 NP_002650 C/T L317P minus 13784 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.16 121 "by doubleHit,freq,cluster" 19q13 "plasminogen activator, urokinase receptor" 379 rs4760 PLAUR 5329 19 48844940 NM_002659 NP_002650 C/T L317P minus 5607654 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 46 0.02 121 "by doubleHit,freq,cluster" 19q13 "plasminogen activator, urokinase receptor" 380 rs4760 PLAUR 5329 19 48844940 NM_002659 NP_002650 C/T L317P minus 5607654 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 42 0.12 121 "by doubleHit,freq,cluster" 19q13 "plasminogen activator, urokinase receptor" 381 rs4760 PLAUR 5329 19 48844940 NM_002659 NP_002650 C/T L317P minus 21508716 1303 SEQUENOM CEPH CEPH (92) 92 0.14 121 "by doubleHit,freq,cluster" 19q13 "plasminogen activator, urokinase receptor" 382 rs4774 MHC2TA 4261 16 10908349 NM_000246 NP_000237 C/G G500A plus 11869 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.36 123 "HapMap,doubleHit,freq,cluster" 16p13 MHC class II transactivator 383 rs4774 MHC2TA 4261 16 10908349 NM_000246 NP_000237 C/G G500A plus 14168 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.31 123 "HapMap,doubleHit,freq,cluster" 16p13 MHC class II transactivator 384 rs4774 MHC2TA 4261 16 10908349 NM_000246 NP_000237 C/G G500A plus 3172899 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 62 0.39 123 "HapMap,doubleHit,freq,cluster" 16p13 MHC class II transactivator 385 rs4774 MHC2TA 4261 16 10908349 NM_000246 NP_000237 C/G G500A plus 6596713 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.32 123 "HapMap,doubleHit,freq,cluster" 16p13 MHC class II transactivator 386 rs4774 MHC2TA 4261 16 10908349 NM_000246 NP_000237 C/G G500A plus 6596713 1303 SEQUENOM CEPH CEPH (92) 92 0.36 123 "HapMap,doubleHit,freq,cluster" 16p13 MHC class II transactivator 387 rs4774 MHC2TA 4261 16 10908349 NM_000246 NP_000237 C/G G500A plus 23587538 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.23 123 "HapMap,doubleHit,freq,cluster" 16p13 MHC class II transactivator 388 rs4774 MHC2TA 4261 16 10908349 NM_000246 NP_000237 C/G G500A plus 23587538 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.26 123 "HapMap,doubleHit,freq,cluster" 16p13 MHC class II transactivator 389 rs4774 MHC2TA 4261 16 10908349 NM_000246 NP_000237 C/G G500A plus 23587538 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.1 123 "HapMap,doubleHit,freq,cluster" 16p13 MHC class II transactivator 390 rs4807 TXNDC7 10130 2 10881501 NM_005742 NP_005733 A/G K214R minus 15613 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.22 123 "by doubleHit,freq,cluster" 2p25.1 thioredoxin domain containing 7 (protein disulfide isomerase) 391 rs4807 TXNDC7 10130 2 10881501 NM_005742 NP_005733 A/G K214R minus 2427777 1303 SEQUENOM CEPH CEPH (92) 92 0.22 123 "by doubleHit,freq,cluster" 2p25.1 thioredoxin domain containing 7 (protein disulfide isomerase) 392 rs4807 TXNDC7 10130 2 10881501 NM_005742 NP_005733 A/G K214R minus 4918100 738 YUSUKE JBIC-ALLELE Japanese (752) 1492 0.31 123 "by doubleHit,freq,cluster" 2p25.1 thioredoxin domain containing 7 (protein disulfide isomerase) 393 rs4807 TXNDC7 10130 2 10881501 NM_005742 NP_005733 A/G K214R minus 24162907 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.21 123 "by doubleHit,freq,cluster" 2p25.1 thioredoxin domain containing 7 (protein disulfide isomerase) 394 rs4807 TXNDC7 10130 2 10881501 NM_005742 NP_005733 A/G K214R minus 24162907 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "by doubleHit,freq,cluster" 2p25.1 thioredoxin domain containing 7 (protein disulfide isomerase) 395 rs4807 TXNDC7 10130 2 10881501 NM_005742 NP_005733 A/G K214R minus 24162907 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "by doubleHit,freq,cluster" 2p25.1 thioredoxin domain containing 7 (protein disulfide isomerase) 396 rs4814 SRP14 6727 15 38115849 NM_003134 NP_003125 A/G T130A minus 15331 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.24 52 by freq 15q22 signal recognition particle 14kDa (homologous Alu RNA binding protein) 397 rs4814 SRP14 6727 15 38115849 NM_003134 NP_003125 A/G T130A minus 15862 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.38 52 by freq 15q22 signal recognition particle 14kDa (homologous Alu RNA binding protein) 398 rs4816 PCMT1 5110 6 150206859 NM_005389 NP_005380 A/G V120I plus 15904 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.37 108 by freq 6q24-q25 protein-L-isoaspartate (D-aspartate) O-methyltransferase 399 rs4830 LGALS14 56891 19 44889764 NM_020129 NP_064514 A/G C67R minus 7418 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.29 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 400 rs4830 LGALS14 56891 19 44889764 NM_020129 NP_064514 A/G C67R minus 16286 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 401 rs4830 LGALS14 56891 19 44889764 NM_020129 NP_064514 A/G C67R minus 3227326 738 YUSUKE JBIC-ALLELE Japanese (752) 1486 0.44 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 402 rs4830 LGALS14 56891 19 44889764 NM_020129 NP_064514 A/G C67R minus 14717934 1303 SEQUENOM CEPH CEPH (92) 92 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 403 rs4830 LGALS14 56891 19 44889764 NM_020129 NP_064514 A/G C67R minus 24683929 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.43 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 404 rs4830 LGALS14 56891 19 44889764 NM_020129 NP_064514 A/G C67R minus 24683929 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.28 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 405 rs4830 LGALS14 56891 19 44889764 NM_020129 NP_064514 A/G C67R minus 24683929 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 406 rs4830 LGALS14 56891 19 44889764 NM_203471 NP_982297 A/G C96R minus 7418 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.29 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 407 rs4830 LGALS14 56891 19 44889764 NM_203471 NP_982297 A/G C96R minus 16286 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 408 rs4830 LGALS14 56891 19 44889764 NM_203471 NP_982297 A/G C96R minus 3227326 738 YUSUKE JBIC-ALLELE Japanese (752) 1486 0.44 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 409 rs4830 LGALS14 56891 19 44889764 NM_203471 NP_982297 A/G C96R minus 14717934 1303 SEQUENOM CEPH CEPH (92) 92 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 410 rs4830 LGALS14 56891 19 44889764 NM_203471 NP_982297 A/G C96R minus 24683929 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.43 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 411 rs4830 LGALS14 56891 19 44889764 NM_203471 NP_982297 A/G C96R minus 24683929 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.28 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 412 rs4830 LGALS14 56891 19 44889764 NM_203471 NP_982297 A/G C96R minus 24683929 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 413 rs4845 MRPS21 54460 1 147093623 NM_018997 NP_061870 A/G R51Q plus 9782 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.3 123 "HapMap,submitter,freq" 1q21 mitochondrial ribosomal protein S21 414 rs4845 MRPS21 54460 1 147093623 NM_018997 NP_061870 A/G R51Q plus 9782 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.05 123 "HapMap,submitter,freq" 1q21 mitochondrial ribosomal protein S21 415 rs4845 MRPS21 54460 1 147093623 NM_018997 NP_061870 A/G R51Q plus 9782 1303 SEQUENOM CEPH CEPH (92) 92 0.3 123 "HapMap,submitter,freq" 1q21 mitochondrial ribosomal protein S21 416 rs4845 MRPS21 54460 1 147093623 NM_018997 NP_061870 A/G R51Q plus 24796138 1303 SEQUENOM CEPH CEPH (92) 184 0.05 123 "HapMap,submitter,freq" 1q21 mitochondrial ribosomal protein S21 417 rs4845 MRPS21 54460 1 147093623 NM_031901 NP_114107 A/G R51Q plus 9782 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.3 123 "HapMap,submitter,freq" 1q21 mitochondrial ribosomal protein S21 418 rs4845 MRPS21 54460 1 147093623 NM_031901 NP_114107 A/G R51Q plus 9782 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.05 123 "HapMap,submitter,freq" 1q21 mitochondrial ribosomal protein S21 419 rs4845 MRPS21 54460 1 147093623 NM_031901 NP_114107 A/G R51Q plus 9782 1303 SEQUENOM CEPH CEPH (92) 92 0.3 123 "HapMap,submitter,freq" 1q21 mitochondrial ribosomal protein S21 420 rs4845 MRPS21 54460 1 147093623 NM_031901 NP_114107 A/G R51Q plus 24796138 1303 SEQUENOM CEPH CEPH (92) 184 0.05 123 "HapMap,submitter,freq" 1q21 mitochondrial ribosomal protein S21 421 rs4870 TNFRSF14 8764 1 2528567 NM_003820 NP_003811 A/G K17R minus 16359043 693 EGP_SNPS PDR90 NIHPDR 172 0.42 120 "by doubleHit,freq,cluster" 1p36.3-p36.2 "tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)" 422 rs4893 EMP3 2014 19 53525420 NM_001425 NP_001416 A/G I125V plus 5333 1303 SEQUENOM CEPH CEPH (92) 92 0.08 120 by freq 19q13.3 epithelial membrane protein 3 423 rs4894 ATF4 468 22 38242015 NM_001675 NP_001666 A/C Q22P plus 3172836 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 62 0.42 114 "by doubleHit,freq" 22q13.1 activating transcription factor 4 (tax-responsive enhancer element B67) 424 rs4894 ATF4 468 22 38242015 NM_001675 NP_001666 A/C Q22P plus 5298654 1303 SEQUENOM CEPH CEPH (92) 92 0.05 114 "by doubleHit,freq" 22q13.1 activating transcription factor 4 (tax-responsive enhancer element B67) 425 rs4894 ATF4 468 22 38242015 NM_182810 NP_877962 A/C Q22P plus 3172836 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 62 0.42 114 "by doubleHit,freq" 22q13.1 activating transcription factor 4 (tax-responsive enhancer element B67) 426 rs4894 ATF4 468 22 38242015 NM_182810 NP_877962 A/C Q22P plus 5298654 1303 SEQUENOM CEPH CEPH (92) 92 0.05 114 "by doubleHit,freq" 22q13.1 activating transcription factor 4 (tax-responsive enhancer element B67) 427 rs4907 PSMB3 5691 17 34163025 NM_002795 NP_002786 A/T M34L plus 6616906 1303 SEQUENOM CEPH CEPH (92) 92 0.03 123 by freq 17q12 "proteasome (prosome, macropain) subunit, beta type, 3" 428 rs4917 AHSG 197 3 187820415 NM_001622 NP_001613 C/T M248T plus 3529234 1303 SEQUENOM CEPH CEPH (92) 92 0.48 123 "by doubleHit,freq,cluster" 3q27 alpha-2-HS-glycoprotein 429 rs4917 AHSG 197 3 187820415 NM_001622 NP_001613 C/T M248T plus 24642229 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.31 123 "by doubleHit,freq,cluster" 3q27 alpha-2-HS-glycoprotein 430 rs4917 AHSG 197 3 187820415 NM_001622 NP_001613 C/T M248T plus 24642229 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.22 123 "by doubleHit,freq,cluster" 3q27 alpha-2-HS-glycoprotein 431 rs4917 AHSG 197 3 187820415 NM_001622 NP_001613 C/T M248T plus 24642229 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.21 123 "by doubleHit,freq,cluster" 3q27 alpha-2-HS-glycoprotein 432 rs4918 AHSG 197 3 187821084 NM_001622 NP_001613 C/G S256T plus 2121290 638 TSC-CSHL TSC_42_AA TSC African American (42) 76 0.28 123 by freq 3q27 alpha-2-HS-glycoprotein 433 rs4918 AHSG 197 3 187821084 NM_001622 NP_001613 C/G S256T plus 2121290 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 70 0.2 123 by freq 3q27 alpha-2-HS-glycoprotein 434 rs4918 AHSG 197 3 187821084 NM_001622 NP_001613 C/G S256T plus 2121290 640 TSC-CSHL TSC_42_A TSC Asian (42) 76 0.21 123 by freq 3q27 alpha-2-HS-glycoprotein 435 rs4918 AHSG 197 3 187821084 NM_001622 NP_001613 C/G S256T plus 2121290 758 TSC-CSHL CEL_AFRICAN_AMERICAN CELERA African-American (30) 60 0.28 123 by freq 3q27 alpha-2-HS-glycoprotein 436 rs4918 AHSG 197 3 187821084 NM_001622 NP_001613 C/G S256T plus 2121290 759 TSC-CSHL CEL_ASIAN CELERA Asians (30) 58 0.24 123 by freq 3q27 alpha-2-HS-glycoprotein 437 rs4918 AHSG 197 3 187821084 NM_001622 NP_001613 C/G S256T plus 2121290 760 TSC-CSHL CEL_CAUCASIAN CELERA Caucasians (30) 60 0.3 123 by freq 3q27 alpha-2-HS-glycoprotein 438 rs4918 AHSG 197 3 187821084 NM_001622 NP_001613 C/G S256T plus 2121290 1303 SEQUENOM CEPH CEPH (92) 92 0.26 123 by freq 3q27 alpha-2-HS-glycoprotein 439 rs4918 AHSG 197 3 187821084 NM_001622 NP_001613 C/G S256T plus 24642234 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.31 123 by freq 3q27 alpha-2-HS-glycoprotein 440 rs4918 AHSG 197 3 187821084 NM_001622 NP_001613 C/G S256T plus 24642234 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.23 123 by freq 3q27 alpha-2-HS-glycoprotein 441 rs4918 AHSG 197 3 187821084 NM_001622 NP_001613 C/G S256T plus 24642234 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.21 123 by freq 3q27 alpha-2-HS-glycoprotein 442 rs4920 RAB11A 8766 15 63967202 NM_004663 NP_004654 G/T K207N plus 5395 1303 SEQUENOM CEPH CEPH (92) 92 0.02 52 by freq 15q21.3-q22.31 "RAB11A, member RAS oncogene family" 443 rs4925 GSTO1 9446 10 106012779 NM_004832 NP_004823 A/C A140D plus 4926470 738 YUSUKE JBIC-ALLELE Japanese (752) 1450 0.12 123 "HapMap,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 1 444 rs4925 GSTO1 9446 10 106012779 NM_004832 NP_004823 A/C A140D plus 4926470 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.34 123 "HapMap,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 1 445 rs4925 GSTO1 9446 10 106012779 NM_004832 NP_004823 A/C A140D plus 4926470 1100 HVA TORREON Mexican (persons who are ingesting inorganic arsenic in their drinking water) 76 0.21 123 "HapMap,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 1 446 rs4925 GSTO1 9446 10 106012779 NM_004832 NP_004823 A/C A140D plus 20723413 1303 SEQUENOM CEPH CEPH (92) 92 0.36 123 "HapMap,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 1 447 rs4925 GSTO1 9446 10 106012779 NM_004832 NP_004823 A/C A140D plus 24502881 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.33 123 "HapMap,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 1 448 rs4925 GSTO1 9446 10 106012779 NM_004832 NP_004823 A/C A140D plus 24502881 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "HapMap,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 1 449 rs4925 GSTO1 9446 10 106012779 NM_004832 NP_004823 A/C A140D plus 24502881 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.17 123 "HapMap,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 1 450 rs4926 SERPING1 710 11 57138565 NM_000062 NP_000053 A/G V480M plus 3177294 619 WICVAR MITOGPOP6 CORIELL Mixed 48 0.35 123 "HapMap,doubleHit,freq,cluster" 11q12-q13.1 "serine (or cysteine) proteinase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary)" 451 rs4926 SERPING1 710 11 57138565 NM_000062 NP_000053 A/G V480M plus 3177294 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.2 123 "HapMap,doubleHit,freq,cluster" 11q12-q13.1 "serine (or cysteine) proteinase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary)" 452 rs4926 SERPING1 710 11 57138565 NM_000062 NP_000053 A/G V480M plus 3177294 1303 SEQUENOM CEPH CEPH (92) 92 0.47 123 "HapMap,doubleHit,freq,cluster" 11q12-q13.1 "serine (or cysteine) proteinase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary)" 453 rs4926 SERPING1 710 11 57138565 NM_000062 NP_000053 A/G V480M plus 3205311 738 YUSUKE JBIC-ALLELE Japanese (752) 1302 0.1 123 "HapMap,doubleHit,freq,cluster" 11q12-q13.1 "serine (or cysteine) proteinase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary)" 454 rs4926 SERPING1 710 11 57138565 NM_000062 NP_000053 A/G V480M plus 24667718 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.19 123 "HapMap,doubleHit,freq,cluster" 11q12-q13.1 "serine (or cysteine) proteinase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary)" 455 rs4926 SERPING1 710 11 57138565 NM_000062 NP_000053 A/G V480M plus 24667718 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "HapMap,doubleHit,freq,cluster" 11q12-q13.1 "serine (or cysteine) proteinase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary)" 456 rs4926 SERPING1 710 11 57138565 NM_000062 NP_000053 A/G V480M plus 24667718 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.15 123 "HapMap,doubleHit,freq,cluster" 11q12-q13.1 "serine (or cysteine) proteinase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary)" 457 rs4945 MFGE8 4240 15 87257548 NM_005928 NP_005919 A/C R3S minus 5471 1303 SEQUENOM CEPH CEPH (92) 92 0.4 123 by freq 15q25 milk fat globule-EGF factor 8 protein 458 rs4948 CAST 831 5 96123759 NM_001750 NP_001741 C/T A537V plus 1824746 1303 SEQUENOM CEPH CEPH (92) 92 1 120 "by doubleHit,cluster" 5q15-q21 calpastatin 459 rs4948 CAST 831 5 96123759 NM_173060 NP_775083 C/T A515V plus 1824746 1303 SEQUENOM CEPH CEPH (92) 92 1 120 "by doubleHit,cluster" 5q15-q21 calpastatin 460 rs4948 CAST 831 5 96123759 NM_173061 NP_775084 C/T A260V plus 1824746 1303 SEQUENOM CEPH CEPH (92) 92 1 120 "by doubleHit,cluster" 5q15-q21 calpastatin 461 rs4948 CAST 831 5 96123759 NM_173062 NP_775085 C/T A419V plus 1824746 1303 SEQUENOM CEPH CEPH (92) 92 1 120 "by doubleHit,cluster" 5q15-q21 calpastatin 462 rs4961 ADD1 118 4 2943715 NM_001119 NP_001110 G/T G460W plus 6393 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.15 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 463 rs4961 ADD1 118 4 2943715 NM_001119 NP_001110 G/T G460W plus 22886500 1303 SEQUENOM CEPH CEPH (92) 92 0.25 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 464 rs4961 ADD1 118 4 2943715 NM_001119 NP_001110 G/T G460W plus 23891988 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 465 rs4961 ADD1 118 4 2943715 NM_001119 NP_001110 G/T G460W plus 23891988 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 466 rs4961 ADD1 118 4 2943715 NM_001119 NP_001110 G/T G460W plus 23891988 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 467 rs4961 ADD1 118 4 2943715 NM_014189 NP_054908 G/T G460W plus 6393 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.15 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 468 rs4961 ADD1 118 4 2943715 NM_014189 NP_054908 G/T G460W plus 22886500 1303 SEQUENOM CEPH CEPH (92) 92 0.25 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 469 rs4961 ADD1 118 4 2943715 NM_014189 NP_054908 G/T G460W plus 23891988 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 470 rs4961 ADD1 118 4 2943715 NM_014189 NP_054908 G/T G460W plus 23891988 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 471 rs4961 ADD1 118 4 2943715 NM_014189 NP_054908 G/T G460W plus 23891988 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 472 rs4961 ADD1 118 4 2943715 NM_014190 NP_054909 G/T G460W plus 6393 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.15 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 473 rs4961 ADD1 118 4 2943715 NM_014190 NP_054909 G/T G460W plus 22886500 1303 SEQUENOM CEPH CEPH (92) 92 0.25 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 474 rs4961 ADD1 118 4 2943715 NM_014190 NP_054909 G/T G460W plus 23891988 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 475 rs4961 ADD1 118 4 2943715 NM_014190 NP_054909 G/T G460W plus 23891988 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 476 rs4961 ADD1 118 4 2943715 NM_014190 NP_054909 G/T G460W plus 23891988 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 477 rs4961 ADD1 118 4 2943715 NM_176801 NP_789771 G/T G460W plus 6393 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.15 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 478 rs4961 ADD1 118 4 2943715 NM_176801 NP_789771 G/T G460W plus 22886500 1303 SEQUENOM CEPH CEPH (92) 92 0.25 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 479 rs4961 ADD1 118 4 2943715 NM_176801 NP_789771 G/T G460W plus 23891988 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 480 rs4961 ADD1 118 4 2943715 NM_176801 NP_789771 G/T G460W plus 23891988 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 481 rs4961 ADD1 118 4 2943715 NM_176801 NP_789771 G/T G460W plus 23891988 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 4p16.3 adducin 1 (alpha) 482 rs4962 ADD1 118 4 2947263 NM_001119 NP_001110 A/T N510I plus 6394 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 4p16.3 adducin 1 (alpha) 483 rs4962 ADD1 118 4 2947263 NM_014189 NP_054908 A/T N541I plus 6394 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 4p16.3 adducin 1 (alpha) 484 rs4962 ADD1 118 4 2947263 NM_014190 NP_054909 A/T N510I plus 6394 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 4p16.3 adducin 1 (alpha) 485 rs4962 ADD1 118 4 2947263 NM_176801 NP_789771 A/T N541I plus 6394 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 4p16.3 adducin 1 (alpha) 486 rs4963 ADD1 118 4 2953770 NM_001119 NP_001110 C/G S586C plus 6395 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.4 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 487 rs4963 ADD1 118 4 2953770 NM_001119 NP_001110 C/G S586C plus 3195050 738 YUSUKE JBIC-ALLELE Japanese (752) 1292 0.45 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 488 rs4963 ADD1 118 4 2953770 NM_001119 NP_001110 C/G S586C plus 6459656 1303 SEQUENOM CEPH CEPH (92) 92 0.12 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 489 rs4963 ADD1 118 4 2953770 NM_001119 NP_001110 C/G S586C plus 23892075 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.14 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 490 rs4963 ADD1 118 4 2953770 NM_001119 NP_001110 C/G S586C plus 23892075 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.18 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 491 rs4963 ADD1 118 4 2953770 NM_001119 NP_001110 C/G S586C plus 23892075 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.48 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 492 rs4963 ADD1 118 4 2953770 NM_014189 NP_054908 C/G S617C plus 6395 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.4 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 493 rs4963 ADD1 118 4 2953770 NM_014189 NP_054908 C/G S617C plus 3195050 738 YUSUKE JBIC-ALLELE Japanese (752) 1292 0.45 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 494 rs4963 ADD1 118 4 2953770 NM_014189 NP_054908 C/G S617C plus 6459656 1303 SEQUENOM CEPH CEPH (92) 92 0.12 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 495 rs4963 ADD1 118 4 2953770 NM_014189 NP_054908 C/G S617C plus 23892075 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.14 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 496 rs4963 ADD1 118 4 2953770 NM_014189 NP_054908 C/G S617C plus 23892075 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.18 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 497 rs4963 ADD1 118 4 2953770 NM_014189 NP_054908 C/G S617C plus 23892075 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.48 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 498 rs4963 ADD1 118 4 2953770 NM_014190 NP_054909 C/G S586C plus 6395 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.4 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 499 rs4963 ADD1 118 4 2953770 NM_014190 NP_054909 C/G S586C plus 3195050 738 YUSUKE JBIC-ALLELE Japanese (752) 1292 0.45 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 500 rs4963 ADD1 118 4 2953770 NM_014190 NP_054909 C/G S586C plus 6459656 1303 SEQUENOM CEPH CEPH (92) 92 0.12 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 501 rs4963 ADD1 118 4 2953770 NM_014190 NP_054909 C/G S586C plus 23892075 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.14 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 502 rs4963 ADD1 118 4 2953770 NM_014190 NP_054909 C/G S586C plus 23892075 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.18 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 503 rs4963 ADD1 118 4 2953770 NM_014190 NP_054909 C/G S586C plus 23892075 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.48 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 504 rs4963 ADD1 118 4 2953770 NM_176801 NP_789771 C/G S617C plus 6395 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.4 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 505 rs4963 ADD1 118 4 2953770 NM_176801 NP_789771 C/G S617C plus 3195050 738 YUSUKE JBIC-ALLELE Japanese (752) 1292 0.45 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 506 rs4963 ADD1 118 4 2953770 NM_176801 NP_789771 C/G S617C plus 6459656 1303 SEQUENOM CEPH CEPH (92) 92 0.12 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 507 rs4963 ADD1 118 4 2953770 NM_176801 NP_789771 C/G S617C plus 23892075 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.14 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 508 rs4963 ADD1 118 4 2953770 NM_176801 NP_789771 C/G S617C plus 23892075 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.18 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 509 rs4963 ADD1 118 4 2953770 NM_176801 NP_789771 C/G S617C plus 23892075 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.48 123 "by cluster,freq" 4p16.3 adducin 1 (alpha) 510 rs4971 ADD1 118 4 2936985 NM_001119 NP_001110 A/T Y270N plus 6404 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 4p16.3 adducin 1 (alpha) 511 rs4971 ADD1 118 4 2936985 NM_001119 NP_001110 A/T Y270N plus 6404 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4p16.3 adducin 1 (alpha) 512 rs4971 ADD1 118 4 2936985 NM_014189 NP_054908 A/T Y270N plus 6404 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 4p16.3 adducin 1 (alpha) 513 rs4971 ADD1 118 4 2936985 NM_014189 NP_054908 A/T Y270N plus 6404 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4p16.3 adducin 1 (alpha) 514 rs4971 ADD1 118 4 2936985 NM_014190 NP_054909 A/T Y270N plus 6404 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 4p16.3 adducin 1 (alpha) 515 rs4971 ADD1 118 4 2936985 NM_014190 NP_054909 A/T Y270N plus 6404 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4p16.3 adducin 1 (alpha) 516 rs4971 ADD1 118 4 2936985 NM_176801 NP_789771 A/T Y270N plus 6404 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 4p16.3 adducin 1 (alpha) 517 rs4971 ADD1 118 4 2936985 NM_176801 NP_789771 A/T Y270N plus 6404 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4p16.3 adducin 1 (alpha) 518 rs4972 ADD1 118 4 2938137 NM_001119 NP_001110 A/T E376D plus 6405 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 4p16.3 adducin 1 (alpha) 519 rs4972 ADD1 118 4 2938137 NM_001119 NP_001110 A/T E376D plus 6405 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4p16.3 adducin 1 (alpha) 520 rs4972 ADD1 118 4 2938137 NM_014189 NP_054908 A/T E376D plus 6405 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 4p16.3 adducin 1 (alpha) 521 rs4972 ADD1 118 4 2938137 NM_014189 NP_054908 A/T E376D plus 6405 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4p16.3 adducin 1 (alpha) 522 rs4972 ADD1 118 4 2938137 NM_014190 NP_054909 A/T E376D plus 6405 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 4p16.3 adducin 1 (alpha) 523 rs4972 ADD1 118 4 2938137 NM_014190 NP_054909 A/T E376D plus 6405 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4p16.3 adducin 1 (alpha) 524 rs4972 ADD1 118 4 2938137 NM_176801 NP_789771 A/T E376D plus 6405 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 4p16.3 adducin 1 (alpha) 525 rs4972 ADD1 118 4 2938137 NM_176801 NP_789771 A/T E376D plus 6405 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4p16.3 adducin 1 (alpha) 526 rs4976 ACE 1636 17 58924669 NM_000789 NP_000780 C/T I1018T plus 6413 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 527 rs4976 ACE 1636 17 58924669 NM_000789 NP_000780 C/T I1018T plus 6413 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 528 rs4976 ACE 1636 17 58924669 NM_152830 NP_690043 C/T I444T plus 6413 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 529 rs4976 ACE 1636 17 58924669 NM_152830 NP_690043 C/T I444T plus 6413 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 530 rs4976 ACE 1636 17 58924669 NM_152831 NP_690044 C/T I444T plus 6413 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 531 rs4976 ACE 1636 17 58924669 NM_152831 NP_690044 C/T I444T plus 6413 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 532 rs4980 ACE 1636 17 58928374 NM_000789 NP_000780 A/G R1279Q plus 6417 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 533 rs4980 ACE 1636 17 58928374 NM_000789 NP_000780 A/G R1279Q plus 6417 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 534 rs4980 ACE 1636 17 58928374 NM_152830 NP_690043 A/G R705Q plus 6417 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 535 rs4980 ACE 1636 17 58928374 NM_152830 NP_690043 A/G R705Q plus 6417 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 17q23 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 536 rs4982 ADD2 119 2 70822498 NM_001617 NP_001608 G/T E335D minus 6421 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 537 rs4982 ADD2 119 2 70822498 NM_001617 NP_001608 G/T E335D minus 6421 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 538 rs4982 ADD2 119 2 70822498 NM_001617 NP_001608 G/T E335D minus 6421 1303 SEQUENOM CEPH CEPH (92) 92 0.04 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 539 rs4982 ADD2 119 2 70822498 NM_001617 NP_001608 G/T E335D minus 23215245 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 540 rs4982 ADD2 119 2 70822498 NM_001617 NP_001608 G/T E335D minus 23215245 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 541 rs4982 ADD2 119 2 70822498 NM_001617 NP_001608 G/T E335D minus 23215245 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 542 rs4982 ADD2 119 2 70822498 NM_017485 NP_059519 G/T E113D minus 6421 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 543 rs4982 ADD2 119 2 70822498 NM_017485 NP_059519 G/T E113D minus 6421 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 544 rs4982 ADD2 119 2 70822498 NM_017485 NP_059519 G/T E113D minus 6421 1303 SEQUENOM CEPH CEPH (92) 92 0.04 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 545 rs4982 ADD2 119 2 70822498 NM_017485 NP_059519 G/T E113D minus 23215245 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 546 rs4982 ADD2 119 2 70822498 NM_017485 NP_059519 G/T E113D minus 23215245 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 547 rs4982 ADD2 119 2 70822498 NM_017485 NP_059519 G/T E113D minus 23215245 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 548 rs4982 ADD2 119 2 70822498 NM_017488 NP_059522 G/T E335D minus 6421 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 549 rs4982 ADD2 119 2 70822498 NM_017488 NP_059522 G/T E335D minus 6421 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 550 rs4982 ADD2 119 2 70822498 NM_017488 NP_059522 G/T E335D minus 6421 1303 SEQUENOM CEPH CEPH (92) 92 0.04 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 551 rs4982 ADD2 119 2 70822498 NM_017488 NP_059522 G/T E335D minus 23215245 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 552 rs4982 ADD2 119 2 70822498 NM_017488 NP_059522 G/T E335D minus 23215245 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 553 rs4982 ADD2 119 2 70822498 NM_017488 NP_059522 G/T E335D minus 23215245 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,freq,cluster" 2p14-p13 adducin 2 (beta) 554 rs4985 ADD2 119 2 70802404 NM_001617 NP_001608 A/C S663R minus 6424 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 2p14-p13 adducin 2 (beta) 555 rs4985 ADD2 119 2 70802404 NM_001617 NP_001608 A/C S663R minus 6424 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 2p14-p13 adducin 2 (beta) 556 rs4985 ADD2 119 2 70802404 NM_017483 NP_059517 A/C S357R minus 6424 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 2p14-p13 adducin 2 (beta) 557 rs4985 ADD2 119 2 70802404 NM_017483 NP_059517 A/C S357R minus 6424 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 2p14-p13 adducin 2 (beta) 558 rs4985 ADD2 119 2 70802404 NM_017485 NP_059519 A/C S441R minus 6424 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 2p14-p13 adducin 2 (beta) 559 rs4985 ADD2 119 2 70802404 NM_017485 NP_059519 A/C S441R minus 6424 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 2p14-p13 adducin 2 (beta) 560 rs4985 ADD2 119 2 70802404 NM_017486 NP_059520 A/C S349R minus 6424 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 2p14-p13 adducin 2 (beta) 561 rs4985 ADD2 119 2 70802404 NM_017486 NP_059520 A/C S349R minus 6424 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 2p14-p13 adducin 2 (beta) 562 rs4986 ADD2 119 2 70845114 NM_001617 NP_001608 A/G D28N minus 6425 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 52 by freq 2p14-p13 adducin 2 (beta) 563 rs4986 ADD2 119 2 70845114 NM_001617 NP_001608 A/G D28N minus 6425 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 2p14-p13 adducin 2 (beta) 564 rs4986 ADD2 119 2 70845114 NM_017483 NP_059517 A/G D28N minus 6425 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 52 by freq 2p14-p13 adducin 2 (beta) 565 rs4986 ADD2 119 2 70845114 NM_017483 NP_059517 A/G D28N minus 6425 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 2p14-p13 adducin 2 (beta) 566 rs4986 ADD2 119 2 70845114 NM_017485 NP_059519 A/G D28N minus 6425 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 52 by freq 2p14-p13 adducin 2 (beta) 567 rs4986 ADD2 119 2 70845114 NM_017485 NP_059519 A/G D28N minus 6425 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 2p14-p13 adducin 2 (beta) 568 rs4986 ADD2 119 2 70845114 NM_017486 NP_059520 A/G D28N minus 6425 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 52 by freq 2p14-p13 adducin 2 (beta) 569 rs4986 ADD2 119 2 70845114 NM_017486 NP_059520 A/G D28N minus 6425 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 2p14-p13 adducin 2 (beta) 570 rs4986 ADD2 119 2 70845114 NM_017488 NP_059522 A/G D28N minus 6425 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 52 by freq 2p14-p13 adducin 2 (beta) 571 rs4986 ADD2 119 2 70845114 NM_017488 NP_059522 A/G D28N minus 6425 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 2p14-p13 adducin 2 (beta) 572 rs4990 ADORA2A 135 22 23161671 NM_000675 NP_000666 A/G R300H plus 6430 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 22q11.23 adenosine A2a receptor 573 rs4990 ADORA2A 135 22 23161671 NM_000675 NP_000666 A/G R300H plus 6430 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 22q11.23 adenosine A2a receptor 574 rs4994 ADRB3 155 8 37942955 NM_000025 NP_000016 C/T W64R minus 6434 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.15 123 "by cluster,freq" 8p12-p11.2 "adrenergic, beta-3-, receptor" 575 rs4994 ADRB3 155 8 37942955 NM_000025 NP_000016 C/T W64R minus 19434 604 KWOK HydatidiformMoles 10 0.2 123 "by cluster,freq" 8p12-p11.2 "adrenergic, beta-3-, receptor" 576 rs4994 ADRB3 155 8 37942955 NM_000025 NP_000016 C/T W64R minus 2985134 738 YUSUKE JBIC-ALLELE Japanese (752) 1064 0.18 123 "by cluster,freq" 8p12-p11.2 "adrenergic, beta-3-, receptor" 577 rs4994 ADRB3 155 8 37942955 NM_000025 NP_000016 C/T W64R minus 8819655 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.13 123 "by cluster,freq" 8p12-p11.2 "adrenergic, beta-3-, receptor" 578 rs4994 ADRB3 155 8 37942955 NM_000025 NP_000016 C/T W64R minus 8819655 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.15 123 "by cluster,freq" 8p12-p11.2 "adrenergic, beta-3-, receptor" 579 rs4994 ADRB3 155 8 37942955 NM_000025 NP_000016 C/T W64R minus 8819655 776 SNP500CANCER AFR1 African / African-American (24) 48 0.1 123 "by cluster,freq" 8p12-p11.2 "adrenergic, beta-3-, receptor" 580 rs4994 ADRB3 155 8 37942955 NM_000025 NP_000016 C/T W64R minus 8819655 777 SNP500CANCER HISP1 Hispanic (23) 46 0.11 123 "by cluster,freq" 8p12-p11.2 "adrenergic, beta-3-, receptor" 581 rs4994 ADRB3 155 8 37942955 NM_000025 NP_000016 C/T W64R minus 8819655 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.15 123 "by cluster,freq" 8p12-p11.2 "adrenergic, beta-3-, receptor" 582 rs4994 ADRB3 155 8 37942955 NM_000025 NP_000016 C/T W64R minus 20418324 1229 PHARMGKB_APP PA129962750 458 0.07 123 "by cluster,freq" 8p12-p11.2 "adrenergic, beta-3-, receptor" 583 rs4994 ADRB3 155 8 37942955 NM_000025 NP_000016 C/T W64R minus 24795952 1303 SEQUENOM CEPH CEPH (92) 184 0.38 123 "by cluster,freq" 8p12-p11.2 "adrenergic, beta-3-, receptor" 584 rs4994 ADRB3 155 8 37942955 NM_000025 NP_000016 C/T W64R minus 24811637 1303 SEQUENOM CEPH CEPH (92) 184 0.21 123 "by cluster,freq" 8p12-p11.2 "adrenergic, beta-3-, receptor" 585 rs4995 ADRB3 155 8 37942351 NM_000025 NP_000016 C/T T265M minus 6435 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 8p12-p11.2 "adrenergic, beta-3-, receptor" 586 rs5005 ADM 133 11 10284123 NM_001124 NP_001115 C/G S50R plus 6445 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by submitter,freq,cluster" 11p15.4 adrenomedullin 587 rs5005 ADM 133 11 10284123 NM_001124 NP_001115 C/G S50R plus 6445 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by submitter,freq,cluster" 11p15.4 adrenomedullin 588 rs5005 ADM 133 11 10284123 NM_001124 NP_001115 C/G S50R plus 23557388 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by submitter,freq,cluster" 11p15.4 adrenomedullin 589 rs5005 ADM 133 11 10284123 NM_001124 NP_001115 C/G S50R plus 23557388 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "by submitter,freq,cluster" 11p15.4 adrenomedullin 590 rs5005 ADM 133 11 10284123 NM_001124 NP_001115 C/G S50R plus 23557388 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by submitter,freq,cluster" 11p15.4 adrenomedullin 591 rs5018 SLC4A1 6521 17 39690660 NM_000342 NP_000333 A/T I442F minus 6459 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 592 rs5018 SLC4A1 6521 17 39690660 NM_000342 NP_000333 A/T I442F minus 6459 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 593 rs5019 SLC4A1 6521 17 39688611 NM_000342 NP_000333 A/T M586L minus 6460 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 52 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 594 rs5019 SLC4A1 6521 17 39688611 NM_000342 NP_000333 A/T M586L minus 6460 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 595 rs5022 SLC4A1 6521 17 39686261 NM_000342 NP_000333 A/G I688V minus 6463 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 596 rs5022 SLC4A1 6521 17 39686261 NM_000342 NP_000333 A/G I688V minus 6463 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 597 rs5023 SLC4A1 6521 17 39686255 NM_000342 NP_000333 A/G S690G minus 6464 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 598 rs5025 SLC4A1 6521 17 39684213 NM_000342 NP_000333 A/G R832H minus 6466 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 599 rs5026 SLC4A1 6521 17 39684124 NM_000342 NP_000333 A/G V862I minus 6467 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 600 rs5026 SLC4A1 6521 17 39684124 NM_000342 NP_000333 A/G V862I minus 6467 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 601 rs5026 SLC4A1 6521 17 39684124 NM_000342 NP_000333 A/G V862I minus 23605008 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 602 rs5026 SLC4A1 6521 17 39684124 NM_000342 NP_000333 A/G V862I minus 23605008 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "by cluster,freq" 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 603 rs5026 SLC4A1 6521 17 39684124 NM_000342 NP_000333 A/G V862I minus 23605008 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 604 rs5035 SLC4A1 6521 17 39694524 NM_000342 NP_000333 A/C D38A minus 6476 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 123 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 605 rs5036 SLC4A1 6521 17 39694471 NM_000342 NP_000333 A/G K56E minus 6477 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.25 123 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 606 rs5036 SLC4A1 6521 17 39694471 NM_000342 NP_000333 A/G K56E minus 6477 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 607 rs5036 SLC4A1 6521 17 39694471 NM_000342 NP_000333 A/G K56E minus 28461680 549 KYUGEN CP CEPH (78) 156 0.1 123 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 608 rs5036 SLC4A1 6521 17 39694471 NM_000342 NP_000333 A/G K56E minus 28461680 1335 KYUGEN JPK2 Japanese (100) 200 0.12 123 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 609 rs5037 SLC4A1 6521 17 39693542 NM_000342 NP_000333 A/T R112S minus 6478 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 610 rs5037 SLC4A1 6521 17 39693542 NM_000342 NP_000333 A/T R112S minus 6478 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q21-q22 "solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)" 611 rs5039 AGT 183 1 227153175 NM_000029 NP_000020 C/T Q53X minus 6480 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 1q42-q43 "angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8)" 612 rs5039 AGT 183 1 227153175 NM_000029 NP_000020 C/T Q53X minus 6480 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1q42-q43 "angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8)" 613 rs5054 AKR1B1 231 7 133601027 NM_001628 NP_001619 A/T I15F minus 6498 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 52 HapMap 7q35 "aldo-keto reductase family 1, member B1 (aldose reductase)" 614 rs5054 AKR1B1 231 7 133601027 NM_001628 NP_001619 A/T I15F minus 6498 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 7q35 "aldo-keto reductase family 1, member B1 (aldose reductase)" 615 rs5054 AKR1B1 231 7 133601027 NM_001628 NP_001619 A/T I15F minus 6498 1303 SEQUENOM CEPH CEPH (92) 92 0.01 52 HapMap 7q35 "aldo-keto reductase family 1, member B1 (aldose reductase)" 616 rs5056 AKR1B1 231 7 133593702 NM_001628 NP_001619 A/T H42L minus 6500 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 7q35 "aldo-keto reductase family 1, member B1 (aldose reductase)" 617 rs5056 AKR1B1 231 7 133593702 NM_001628 NP_001619 A/T H42L minus 6500 1303 SEQUENOM CEPH CEPH (92) 92 0.01 52 by freq 7q35 "aldo-keto reductase family 1, member B1 (aldose reductase)" 618 rs5057 AKR1B1 231 7 133593610 NM_001628 NP_001619 C/G L73V minus 6501 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 HapMap 7q35 "aldo-keto reductase family 1, member B1 (aldose reductase)" 619 rs5057 AKR1B1 231 7 133593610 NM_001628 NP_001619 C/G L73V minus 6501 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 7q35 "aldo-keto reductase family 1, member B1 (aldose reductase)" 620 rs5061 AKR1B1 231 7 133590443 NM_001628 NP_001619 A/G G204S minus 6505 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 7q35 "aldo-keto reductase family 1, member B1 (aldose reductase)" 621 rs5061 AKR1B1 231 7 133590443 NM_001628 NP_001619 A/G G204S minus 6505 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 7q35 "aldo-keto reductase family 1, member B1 (aldose reductase)" 622 rs5062 AKR1B1 231 7 133587290 NM_001628 NP_001619 C/T T288I minus 6506 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 7q35 "aldo-keto reductase family 1, member B1 (aldose reductase)" 623 rs5063 NPPA 4878 1 11841914 NM_006172 NP_006163 A/G V32M minus 6507 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.05 123 "by submitter,freq,cluster" 1p36.21 natriuretic peptide precursor A 624 rs5063 NPPA 4878 1 11841914 NM_006172 NP_006163 A/G V32M minus 3189236 738 YUSUKE JBIC-ALLELE Japanese (752) 1502 0.09 123 "by submitter,freq,cluster" 1p36.21 natriuretic peptide precursor A 625 rs5063 NPPA 4878 1 11841914 NM_006172 NP_006163 A/G V32M minus 22886255 1303 SEQUENOM CEPH CEPH (92) 92 0.01 123 "by submitter,freq,cluster" 1p36.21 natriuretic peptide precursor A 626 rs5063 NPPA 4878 1 11841914 NM_006172 NP_006163 A/G V32M minus 23838405 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "by submitter,freq,cluster" 1p36.21 natriuretic peptide precursor A 627 rs5063 NPPA 4878 1 11841914 NM_006172 NP_006163 A/G V32M minus 23838405 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "by submitter,freq,cluster" 1p36.21 natriuretic peptide precursor A 628 rs5063 NPPA 4878 1 11841914 NM_006172 NP_006163 A/G V32M minus 23838405 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.08 123 "by submitter,freq,cluster" 1p36.21 natriuretic peptide precursor A 629 rs5065 NPPA 4878 1 11840334 NM_006172 NP_006163 A/G *152R plus 6509 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.45 123 "HapMap,doubleHit,submitter,freq,cluster" 1p36.21 natriuretic peptide precursor A 630 rs5065 NPPA 4878 1 11840334 NM_006172 NP_006163 A/G *152R plus 678793 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.15 123 "HapMap,doubleHit,submitter,freq,cluster" 1p36.21 natriuretic peptide precursor A 631 rs5065 NPPA 4878 1 11840334 NM_006172 NP_006163 A/G *152R plus 678793 1303 SEQUENOM CEPH CEPH (92) 92 0.15 123 "HapMap,doubleHit,submitter,freq,cluster" 1p36.21 natriuretic peptide precursor A 632 rs5122 APOC2 344 19 50143920 NM_000483 NP_000474 A/G E60K plus 6566 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 19q13.2 apolipoprotein C-II 633 rs5122 APOC2 344 19 50143920 NM_000483 NP_000474 A/G E60K plus 6566 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 19q13.2 apolipoprotein C-II 634 rs5126 APOC2 344 19 50144269 NM_000483 NP_000474 A/C K77Q plus 6570 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.3 52 by freq 19q13.2 apolipoprotein C-II 635 rs5164 APOC4 346 19 50139910 NM_001646 NP_001637 A/G W47X plus 6610 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 HapMap 19q13.2 apolipoprotein C-IV 636 rs5164 APOC4 346 19 50139910 NM_001646 NP_001637 A/G W47X plus 6610 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 19q13.2 apolipoprotein C-IV 637 rs5164 APOC4 346 19 50139910 NM_001646 NP_001637 A/G W47X plus 6610 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 19q13.2 apolipoprotein C-IV 638 rs5167 APOC4 346 19 50140305 NM_001646 NP_001637 G/T L96R plus 6613 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 74 0.5 123 "by doubleHit,submitter,freq,cluster" 19q13.2 apolipoprotein C-IV 639 rs5167 APOC4 346 19 50140305 NM_001646 NP_001637 G/T L96R plus 16797417 1303 SEQUENOM CEPH CEPH (92) 92 0.23 123 "by doubleHit,submitter,freq,cluster" 19q13.2 apolipoprotein C-IV 640 rs5167 APOC4 346 19 50140305 NM_001646 NP_001637 G/T L96R plus 20419759 1232 PHARMGKB_PARC PA129964588 142 0.37 123 "by doubleHit,submitter,freq,cluster" 19q13.2 apolipoprotein C-IV 641 rs5167 APOC4 346 19 50140305 NM_001646 NP_001637 G/T L96R plus 20419889 1232 PHARMGKB_PARC PA129964588 142 0.35 123 "by doubleHit,submitter,freq,cluster" 19q13.2 apolipoprotein C-IV 642 rs5167 APOC4 346 19 50140305 NM_001646 NP_001637 G/T L96R plus 24106807 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.39 123 "by doubleHit,submitter,freq,cluster" 19q13.2 apolipoprotein C-IV 643 rs5167 APOC4 346 19 50140305 NM_001646 NP_001637 G/T L96R plus 24106807 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.41 123 "by doubleHit,submitter,freq,cluster" 19q13.2 apolipoprotein C-IV 644 rs5167 APOC4 346 19 50140305 NM_001646 NP_001637 G/T L96R plus 24106807 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.46 123 "by doubleHit,submitter,freq,cluster" 19q13.2 apolipoprotein C-IV 645 rs5167 APOC4 346 19 50140305 NM_001646 NP_001637 G/T L96R plus 24795972 1303 SEQUENOM CEPH CEPH (92) 184 0.45 123 "by doubleHit,submitter,freq,cluster" 19q13.2 apolipoprotein C-IV 646 rs5168 APOC4 346 19 50140395 NM_001646 NP_001637 A/T Q126L plus 6614 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 19q13.2 apolipoprotein C-IV 647 rs5168 APOC4 346 19 50140395 NM_001646 NP_001637 A/T Q126L plus 6614 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 19q13.2 apolipoprotein C-IV 648 rs5170 LRP8 7804 1 53439844 NM_004631 NP_004622 A/C I611L minus 6616 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 649 rs5170 LRP8 7804 1 53439844 NM_004631 NP_004622 A/C I611L minus 6616 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 650 rs5170 LRP8 7804 1 53439844 NM_017522 NP_059992 A/C I482L minus 6616 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 651 rs5170 LRP8 7804 1 53439844 NM_017522 NP_059992 A/C I482L minus 6616 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 652 rs5170 LRP8 7804 1 53439844 NM_033300 NP_150643 A/C I441L minus 6616 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 653 rs5170 LRP8 7804 1 53439844 NM_033300 NP_150643 A/C I441L minus 6616 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 654 rs5171 LRP8 7804 1 53438255 NM_004631 NP_004622 C/G S653T minus 6617 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 655 rs5171 LRP8 7804 1 53438255 NM_004631 NP_004622 C/G S653T minus 6617 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 656 rs5171 LRP8 7804 1 53438255 NM_017522 NP_059992 C/G S524T minus 6617 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 657 rs5171 LRP8 7804 1 53438255 NM_017522 NP_059992 C/G S524T minus 6617 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 658 rs5171 LRP8 7804 1 53438255 NM_033300 NP_150643 C/G S483T minus 6617 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 659 rs5171 LRP8 7804 1 53438255 NM_033300 NP_150643 C/G S483T minus 6617 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 660 rs5172 LRP8 7804 1 53436014 NM_004631 NP_004622 A/G R736Q minus 6618 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 661 rs5172 LRP8 7804 1 53436014 NM_017522 NP_059992 A/G R607Q minus 6618 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 662 rs5172 LRP8 7804 1 53436014 NM_033300 NP_150643 A/G R566Q minus 6618 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 663 rs5174 LRP8 7804 1 53424748 NM_004631 NP_004622 A/G R952Q minus 6620 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 34 0.5 123 "by doubleHit,freq,cluster" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 664 rs5174 LRP8 7804 1 53424748 NM_004631 NP_004622 A/G R952Q minus 24607626 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.38 123 "by doubleHit,freq,cluster" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 665 rs5174 LRP8 7804 1 53424748 NM_004631 NP_004622 A/G R952Q minus 24607626 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "by doubleHit,freq,cluster" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 666 rs5174 LRP8 7804 1 53424748 NM_004631 NP_004622 A/G R952Q minus 24607626 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.02 123 "by doubleHit,freq,cluster" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 667 rs5174 LRP8 7804 1 53424748 NM_017522 NP_059992 A/G R689Q minus 6620 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 34 0.5 123 "by doubleHit,freq,cluster" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 668 rs5174 LRP8 7804 1 53424748 NM_017522 NP_059992 A/G R689Q minus 24607626 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.38 123 "by doubleHit,freq,cluster" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 669 rs5174 LRP8 7804 1 53424748 NM_017522 NP_059992 A/G R689Q minus 24607626 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "by doubleHit,freq,cluster" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 670 rs5174 LRP8 7804 1 53424748 NM_017522 NP_059992 A/G R689Q minus 24607626 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.02 123 "by doubleHit,freq,cluster" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 671 rs5174 LRP8 7804 1 53424748 NM_033300 NP_150643 A/G R782Q minus 6620 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 34 0.5 123 "by doubleHit,freq,cluster" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 672 rs5174 LRP8 7804 1 53424748 NM_033300 NP_150643 A/G R782Q minus 24607626 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.38 123 "by doubleHit,freq,cluster" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 673 rs5174 LRP8 7804 1 53424748 NM_033300 NP_150643 A/G R782Q minus 24607626 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "by doubleHit,freq,cluster" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 674 rs5174 LRP8 7804 1 53424748 NM_033300 NP_150643 A/G R782Q minus 24607626 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.02 123 "by doubleHit,freq,cluster" 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 675 rs5180 LRP8 7804 1 53444236 NM_004631 NP_004622 A/G V453M minus 6626 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 676 rs5180 LRP8 7804 1 53444236 NM_004631 NP_004622 A/G V453M minus 6626 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 677 rs5180 LRP8 7804 1 53444236 NM_017522 NP_059992 A/G V324M minus 6626 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 678 rs5180 LRP8 7804 1 53444236 NM_017522 NP_059992 A/G V324M minus 6626 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 679 rs5180 LRP8 7804 1 53444236 NM_033300 NP_150643 A/G V283M minus 6626 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 680 rs5180 LRP8 7804 1 53444236 NM_033300 NP_150643 A/G V283M minus 6626 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 681 rs5181 LRP8 7804 1 53444195 NM_004631 NP_004622 C/G W466C minus 6627 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 682 rs5181 LRP8 7804 1 53444195 NM_004631 NP_004622 C/G W466C minus 6627 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 683 rs5181 LRP8 7804 1 53444195 NM_017522 NP_059992 C/G W337C minus 6627 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 684 rs5181 LRP8 7804 1 53444195 NM_017522 NP_059992 C/G W337C minus 6627 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 685 rs5181 LRP8 7804 1 53444195 NM_033300 NP_150643 C/G W296C minus 6627 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 686 rs5181 LRP8 7804 1 53444195 NM_033300 NP_150643 C/G W296C minus 6627 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p34 "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" 687 rs5195 AVP 551 20 3011700 NM_000490 NP_000481 C/T P82L minus 6641 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 20p13 "arginine vasopressin (neurophysin II, antidiuretic hormone, diabetes insipidus, neurohypophyseal)" 688 rs5215 KCNJ11 3767 11 17365206 NM_000525 NP_000516 C/T V337I plus 6661 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.15 123 "by doubleHit,freq,cluster" 11p15.1 "potassium inwardly-rectifying channel, subfamily J, member 11" 689 rs5215 KCNJ11 3767 11 17365206 NM_000525 NP_000516 C/T V337I plus 12586856 1303 SEQUENOM CEPH CEPH (92) 92 0.39 123 "by doubleHit,freq,cluster" 11p15.1 "potassium inwardly-rectifying channel, subfamily J, member 11" 690 rs5215 KCNJ11 3767 11 17365206 NM_000525 NP_000516 C/T V337I plus 24796653 1303 SEQUENOM CEPH CEPH (92) 184 0.36 123 "by doubleHit,freq,cluster" 11p15.1 "potassium inwardly-rectifying channel, subfamily J, member 11" 691 rs5217 KCNJ11 3767 11 17365631 NM_000525 NP_000516 C/T R195H plus 6663 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 11p15.1 "potassium inwardly-rectifying channel, subfamily J, member 11" 692 rs5217 KCNJ11 3767 11 17365631 NM_000525 NP_000516 C/T R195H plus 6663 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 11p15.1 "potassium inwardly-rectifying channel, subfamily J, member 11" 693 rs5219 KCNJ11 3767 11 17366148 NM_000525 NP_000516 C/T K23E plus 6665 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.25 123 "by doubleHit,freq,cluster" 11p15.1 "potassium inwardly-rectifying channel, subfamily J, member 11" 694 rs5219 KCNJ11 3767 11 17366148 NM_000525 NP_000516 C/T K23E plus 12586852 1303 SEQUENOM CEPH CEPH (92) 92 0.29 123 "by doubleHit,freq,cluster" 11p15.1 "potassium inwardly-rectifying channel, subfamily J, member 11" 695 rs5219 KCNJ11 3767 11 17366148 NM_000525 NP_000516 C/T K23E plus 24796654 1303 SEQUENOM CEPH CEPH (92) 184 0.36 123 "by doubleHit,freq,cluster" 11p15.1 "potassium inwardly-rectifying channel, subfamily J, member 11" 696 rs5227 NPPB 4879 1 11853083 NM_002521 NP_002512 G/T R25L minus 6673 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 1p36.2 natriuretic peptide precursor B 697 rs5227 NPPB 4879 1 11853083 NM_002521 NP_002512 G/T R25L minus 6673 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 1p36.2 natriuretic peptide precursor B 698 rs5230 NPPB 4879 1 11852648 NM_002521 NP_002512 A/T M93L minus 6676 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p36.2 natriuretic peptide precursor B 699 rs5230 NPPB 4879 1 11852648 NM_002521 NP_002512 A/T M93L minus 6676 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p36.2 natriuretic peptide precursor B 700 rs5239 CALCA 796 11 14948115 NM_001741 NP_001732 A/G N57D minus 6685 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 121 "by cluster,freq" 11p15.2-p15.1 "calcitonin/calcitonin-related polypeptide, alpha" 701 rs5239 CALCA 796 11 14948115 NM_001741 NP_001732 A/G N57D minus 4044564 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "by cluster,freq" 11p15.2-p15.1 "calcitonin/calcitonin-related polypeptide, alpha" 702 rs5241 CALCA 796 11 14947119 NM_001741 NP_001732 A/C S76R minus 6687 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 123 "by cluster,freq" 11p15.2-p15.1 "calcitonin/calcitonin-related polypeptide, alpha" 703 rs5241 CALCA 796 11 14947119 NM_001741 NP_001732 A/C S76R minus 23582956 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 11p15.2-p15.1 "calcitonin/calcitonin-related polypeptide, alpha" 704 rs5241 CALCA 796 11 14947119 NM_001741 NP_001732 A/C S76R minus 23582956 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "by cluster,freq" 11p15.2-p15.1 "calcitonin/calcitonin-related polypeptide, alpha" 705 rs5241 CALCA 796 11 14947119 NM_001741 NP_001732 A/C S76R minus 23582956 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.02 123 "by cluster,freq" 11p15.2-p15.1 "calcitonin/calcitonin-related polypeptide, alpha" 706 rs5246 CMA1 1215 14 24046475 NM_001836 NP_001827 C/G G46R minus 6693 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 14q11.2 "chymase 1, mast cell" 707 rs5246 CMA1 1215 14 24046475 NM_001836 NP_001827 C/G G46R minus 6693 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 14q11.2 "chymase 1, mast cell" 708 rs5247 CMA1 1215 14 24046414 NM_001836 NP_001827 A/G H66R minus 6694 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 52 by freq 14q11.2 "chymase 1, mast cell" 709 rs5247 CMA1 1215 14 24046414 NM_001836 NP_001827 A/G H66R minus 6694 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 14q11.2 "chymase 1, mast cell" 710 rs5251 CLCNKB 1188 1 16122348 NM_000085 NP_000076 C/G V334L plus 6698 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.4 52 by freq 1p36 chloride channel Kb 711 rs5251 CLCNKB 1188 1 16122348 NM_000085 NP_000076 C/G V334L plus 6698 1303 SEQUENOM CEPH CEPH (92) 92 0.49 52 by freq 1p36 chloride channel Kb 712 rs5253 CLCNKB 1188 1 16125502 NM_000085 NP_000076 C/T M562T plus 6700 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 123 "HapMap,doubleHit,cluster" 1p36 chloride channel Kb 713 rs5253 CLCNKB 1188 1 16125502 NM_000085 NP_000076 C/T M562T plus 3211170 738 YUSUKE JBIC-ALLELE Japanese (752) 1482 0.17 123 "HapMap,doubleHit,cluster" 1p36 chloride channel Kb 714 rs5253 CLCNKB 1188 1 16125502 NM_000085 NP_000076 C/T M562T plus 5284894 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.01 123 "HapMap,doubleHit,cluster" 1p36 chloride channel Kb 715 rs5253 CLCNKB 1188 1 16125502 NM_000085 NP_000076 C/T M562T plus 5284894 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "HapMap,doubleHit,cluster" 1p36 chloride channel Kb 716 rs5256 CLCNKB 1188 1 16118368 NM_000085 NP_000076 A/C S88R plus 6703 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 1p36 chloride channel Kb 717 rs5259 CLCNKB 1188 1 16119774 NM_000085 NP_000076 A/C N143H plus 6706 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 123 "HapMap,cluster" 1p36 chloride channel Kb 718 rs5259 CLCNKB 1188 1 16119774 NM_000085 NP_000076 A/C N143H plus 6706 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 123 "HapMap,cluster" 1p36 chloride channel Kb 719 rs5267 NPPC 4880 2 232615776 NM_024409 NP_077720 A/G R82Q minus 6714 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 2q24-qter natriuretic peptide precursor C 720 rs5267 NPPC 4880 2 232615776 NM_024409 NP_077720 A/G R82Q minus 6714 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 2q24-qter natriuretic peptide precursor C 721 rs5273 PTGS2 5743 1 183375425 NM_000963 NP_000954 C/T V511A minus 6720 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 113 "by cluster,freq" 1q25.2-q25.3 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 722 rs5273 PTGS2 5743 1 183375425 NM_000963 NP_000954 C/T V511A minus 23092 527 OEFNER AUTOSOME Stanford Autosome Collection 4 0.5 113 "by cluster,freq" 1q25.2-q25.3 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 723 rs5273 PTGS2 5743 1 183375425 NM_000963 NP_000954 C/T V511A minus 4479801 506 NCBI NIHPDR NIHPDR 160 0.01 113 "by cluster,freq" 1q25.2-q25.3 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 724 rs5273 PTGS2 5743 1 183375425 NM_000963 NP_000954 C/T V511A minus 5586881 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.03 113 "by cluster,freq" 1q25.2-q25.3 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 725 rs5273 PTGS2 5743 1 183375425 NM_000963 NP_000954 C/T V511A minus 5586881 775 SNP500CANCER CAUC1 Caucasian (31) 62 1 113 "by cluster,freq" 1q25.2-q25.3 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 726 rs5273 PTGS2 5743 1 183375425 NM_000963 NP_000954 C/T V511A minus 5586881 776 SNP500CANCER AFR1 African / African-American (24) 48 0.1 113 "by cluster,freq" 1q25.2-q25.3 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 727 rs5273 PTGS2 5743 1 183375425 NM_000963 NP_000954 C/T V511A minus 5586881 777 SNP500CANCER HISP1 Hispanic (23) 46 0.02 113 "by cluster,freq" 1q25.2-q25.3 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 728 rs5273 PTGS2 5743 1 183375425 NM_000963 NP_000954 C/T V511A minus 5586881 778 SNP500CANCER PAC1 Pacific Rim (24) 46 1 113 "by cluster,freq" 1q25.2-q25.3 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 729 rs5273 PTGS2 5743 1 183375425 NM_000963 NP_000954 C/T V511A minus 6396201 693 EGP_SNPS PDR90 NIHPDR 170 0.01 113 "by cluster,freq" 1q25.2-q25.3 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 730 rs5273 PTGS2 5743 1 183375425 NM_000963 NP_000954 C/T V511A minus 6396201 1303 SEQUENOM CEPH CEPH (92) 92 1 113 "by cluster,freq" 1q25.2-q25.3 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 731 rs5282 CYP11B1 1584 8 143958045 NM_000497 NP_000488 C/G D63H minus 6730 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 732 rs5282 CYP11B1 1584 8 143958045 NM_000497 NP_000488 C/G D63H minus 6730 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 733 rs5287 CYP11B1 1584 8 143955556 NM_000497 NP_000488 C/G M160I minus 6735 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 734 rs5287 CYP11B1 1584 8 143955556 NM_000497 NP_000488 C/G M160I minus 6735 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 735 rs5288 CYP11B1 1584 8 143955128 NM_000497 NP_000488 G/T F257L minus 6737 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 52 by freq 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 736 rs5291 CYP11B1 1584 8 143954771 NM_000497 NP_000488 A/G S281N minus 6741 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 737 rs5291 CYP11B1 1584 8 143954771 NM_000497 NP_000488 A/G S281N minus 6741 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 738 rs5292 CYP11B1 1584 8 143954736 NM_000497 NP_000488 C/G L293V minus 6743 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.2 52 by freq 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 739 rs5292 CYP11B1 1584 8 143954736 NM_000497 NP_000488 C/G L293V minus 6743 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 740 rs5294 CYP11B1 1584 8 143953458 NM_000497 NP_000488 C/T Y439H minus 6745 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 123 "by cluster,freq" 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 741 rs5294 CYP11B1 1584 8 143953458 NM_000497 NP_000488 C/T Y439H minus 24796366 1303 SEQUENOM CEPH CEPH (92) 184 0.36 123 "by cluster,freq" 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 742 rs5308 CYP11B2 1585 8 143993257 NM_000498 NP_000489 A/C N222T minus 6761 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 743 rs5315 CYP11B2 1585 8 143991138 NM_000498 NP_000489 A/T V403E minus 6775 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 HapMap 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 744 rs5315 CYP11B2 1585 8 143991138 NM_000498 NP_000489 A/T V403E minus 6775 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 745 rs5317 CYP11B2 1585 8 143990451 NM_000498 NP_000489 G/T F487V minus 6778 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 746 rs5317 CYP11B2 1585 8 143990451 NM_000498 NP_000489 G/T F487V minus 6778 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 747 rs5319 DBH 1621 9 133536937 NM_000787 NP_000778 C/G E167Q plus 6781 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 748 rs5319 DBH 1621 9 133536937 NM_000787 NP_000778 C/G E167Q plus 6781 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 749 rs5320 DBH 1621 9 133537027 NM_000787 NP_000778 A/G A197T plus 6782 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.1 121 "HapMap,freq,cluster" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 750 rs5320 DBH 1621 9 133537027 NM_000787 NP_000778 A/G A197T plus 6782 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.02 121 "HapMap,freq,cluster" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 751 rs5320 DBH 1621 9 133537027 NM_000787 NP_000778 A/G A197T plus 22886995 1303 SEQUENOM CEPH CEPH (92) 92 0.07 121 "HapMap,freq,cluster" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 752 rs5321 DBH 1621 9 133537113 NM_000787 NP_000778 C/G K225N plus 6783 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 753 rs5321 DBH 1621 9 133537113 NM_000787 NP_000778 C/G K225N plus 6783 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 754 rs5323 DBH 1621 9 133538092 NM_000787 NP_000778 C/G E236Q plus 6785 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 755 rs5324 DBH 1621 9 133538212 NM_000787 NP_000778 A/G D276N plus 6786 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "HapMap,submitter,freq,cluster" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 756 rs5324 DBH 1621 9 133538212 NM_000787 NP_000778 A/G D276N plus 6786 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.1 123 "HapMap,submitter,freq,cluster" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 757 rs5324 DBH 1621 9 133538212 NM_000787 NP_000778 A/G D276N plus 6786 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "HapMap,submitter,freq,cluster" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 758 rs5324 DBH 1621 9 133538212 NM_000787 NP_000778 A/G D276N plus 23677244 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "HapMap,submitter,freq,cluster" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 759 rs5324 DBH 1621 9 133538212 NM_000787 NP_000778 A/G D276N plus 23677244 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "HapMap,submitter,freq,cluster" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 760 rs5324 DBH 1621 9 133538212 NM_000787 NP_000778 A/G D276N plus 23677244 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,submitter,freq,cluster" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 761 rs5325 DBH 1621 9 133538922 NM_000787 NP_000778 C/T L303P plus 6787 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 762 rs5325 DBH 1621 9 133538922 NM_000787 NP_000778 C/T L303P plus 6787 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 763 rs5327 DRD1 1812 5 174802600 NM_000794 NP_000785 A/C T37P minus 6791 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 5q35.1 dopamine receptor D1 764 rs5327 DRD1 1812 5 174802600 NM_000794 NP_000785 A/C T37P minus 6791 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 5q35.1 dopamine receptor D1 765 rs5328 DRD1 1812 5 174802599 NM_000794 NP_000785 C/G T37R minus 6792 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 5q35.1 dopamine receptor D1 766 rs5328 DRD1 1812 5 174802599 NM_000794 NP_000785 C/G T37R minus 6792 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 5q35.1 dopamine receptor D1 767 rs5330 DRD1 1812 5 174802559 NM_000794 NP_000785 G/T R50S minus 6794 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 5q35.1 dopamine receptor D1 768 rs5330 DRD1 1812 5 174802559 NM_000794 NP_000785 G/T R50S minus 6794 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 5q35.1 dopamine receptor D1 769 rs5331 DRD1 1812 5 174802114 NM_000794 NP_000785 G/T S199A minus 6795 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 5q35.1 dopamine receptor D1 770 rs5331 DRD1 1812 5 174802114 NM_000794 NP_000785 G/T S199A minus 6795 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 5q35.1 dopamine receptor D1 771 rs5345 EDNRB 1910 13 77390690 NM_000115 NP_000106 A/T L7Q minus 6809 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 13q22 endothelin receptor type B 772 rs5345 EDNRB 1910 13 77390690 NM_000115 NP_000106 A/T L7Q minus 6809 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 13q22 endothelin receptor type B 773 rs5345 EDNRB 1910 13 77390690 NM_003991 NP_003982 A/T L7Q minus 6809 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 13q22 endothelin receptor type B 774 rs5345 EDNRB 1910 13 77390690 NM_003991 NP_003982 A/T L7Q minus 6809 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 13q22 endothelin receptor type B 775 rs5347 EDNRB 1910 13 77390376 NM_000115 NP_000106 G/T F112V minus 6811 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 13q22 endothelin receptor type B 776 rs5347 EDNRB 1910 13 77390376 NM_000115 NP_000106 G/T F112V minus 6811 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 13q22 endothelin receptor type B 777 rs5347 EDNRB 1910 13 77390376 NM_003991 NP_003982 G/T F112V minus 6811 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 13q22 endothelin receptor type B 778 rs5347 EDNRB 1910 13 77390376 NM_003991 NP_003982 G/T F112V minus 6811 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 13q22 endothelin receptor type B 779 rs5350 EDNRB 1910 13 77375362 NM_000115 NP_000106 C/T T244M minus 6814 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 13q22 endothelin receptor type B 780 rs5350 EDNRB 1910 13 77375362 NM_000115 NP_000106 C/T T244M minus 6814 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 13q22 endothelin receptor type B 781 rs5350 EDNRB 1910 13 77375362 NM_003991 NP_003982 C/T T244M minus 6814 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 13q22 endothelin receptor type B 782 rs5350 EDNRB 1910 13 77375362 NM_003991 NP_003982 C/T T244M minus 6814 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 13q22 endothelin receptor type B 783 rs5352 EDNRB 1910 13 77373231 NM_000115 NP_000106 A/G S305N minus 6816 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 123 "by cluster,freq" 13q22 endothelin receptor type B 784 rs5352 EDNRB 1910 13 77373231 NM_000115 NP_000106 A/G S305N minus 20399050 693 EGP_SNPS PDR90 NIHPDR 174 0.01 123 "by cluster,freq" 13q22 endothelin receptor type B 785 rs5352 EDNRB 1910 13 77373231 NM_000115 NP_000106 A/G S305N minus 20399050 1303 SEQUENOM CEPH CEPH (92) 92 0.03 123 "by cluster,freq" 13q22 endothelin receptor type B 786 rs5352 EDNRB 1910 13 77373231 NM_000115 NP_000106 A/G S305N minus 24396735 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.02 123 "by cluster,freq" 13q22 endothelin receptor type B 787 rs5352 EDNRB 1910 13 77373231 NM_000115 NP_000106 A/G S305N minus 24396735 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by cluster,freq" 13q22 endothelin receptor type B 788 rs5352 EDNRB 1910 13 77373231 NM_000115 NP_000106 A/G S305N minus 24396735 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 13q22 endothelin receptor type B 789 rs5352 EDNRB 1910 13 77373231 NM_003991 NP_003982 A/G S305N minus 6816 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 123 "by cluster,freq" 13q22 endothelin receptor type B 790 rs5352 EDNRB 1910 13 77373231 NM_003991 NP_003982 A/G S305N minus 20399050 693 EGP_SNPS PDR90 NIHPDR 174 0.01 123 "by cluster,freq" 13q22 endothelin receptor type B 791 rs5352 EDNRB 1910 13 77373231 NM_003991 NP_003982 A/G S305N minus 20399050 1303 SEQUENOM CEPH CEPH (92) 92 0.03 123 "by cluster,freq" 13q22 endothelin receptor type B 792 rs5352 EDNRB 1910 13 77373231 NM_003991 NP_003982 A/G S305N minus 24396735 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.02 123 "by cluster,freq" 13q22 endothelin receptor type B 793 rs5352 EDNRB 1910 13 77373231 NM_003991 NP_003982 A/G S305N minus 24396735 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by cluster,freq" 13q22 endothelin receptor type B 794 rs5352 EDNRB 1910 13 77373231 NM_003991 NP_003982 A/G S305N minus 24396735 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 13q22 endothelin receptor type B 795 rs5355 SELE 6401 1 166427528 NM_000450 NP_000441 C/T L575F minus 6819 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 796 rs5355 SELE 6401 1 166427528 NM_000450 NP_000441 C/T L575F minus 5111468 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 42 0.05 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 797 rs5355 SELE 6401 1 166427528 NM_000450 NP_000441 C/T L575F minus 5111468 1303 SEQUENOM CEPH CEPH (92) 92 0.1 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 798 rs5355 SELE 6401 1 166427528 NM_000450 NP_000441 C/T L575F minus 24266318 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 799 rs5355 SELE 6401 1 166427528 NM_000450 NP_000441 C/T L575F minus 24266318 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 800 rs5355 SELE 6401 1 166427528 NM_000450 NP_000441 C/T L575F minus 24266318 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.04 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 801 rs5360 SELE 6401 1 166433445 NM_000450 NP_000441 C/G C130W minus 6825 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 1q22-q25 selectin E (endothelial adhesion molecule 1) 802 rs5360 SELE 6401 1 166433445 NM_000450 NP_000441 C/G C130W minus 6825 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1q22-q25 selectin E (endothelial adhesion molecule 1) 803 rs5361 SELE 6401 1 166432718 NM_000450 NP_000441 A/C S149R minus 6826 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.05 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 804 rs5361 SELE 6401 1 166432718 NM_000450 NP_000441 A/C S149R minus 5111403 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.02 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 805 rs5361 SELE 6401 1 166432718 NM_000450 NP_000441 A/C S149R minus 5111403 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 44 0.09 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 806 rs5361 SELE 6401 1 166432718 NM_000450 NP_000441 A/C S149R minus 5111403 1303 SEQUENOM CEPH CEPH (92) 92 0.02 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 807 rs5361 SELE 6401 1 166432718 NM_000450 NP_000441 A/C S149R minus 6903932 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.08 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 808 rs5361 SELE 6401 1 166432718 NM_000450 NP_000441 A/C S149R minus 6903932 775 SNP500CANCER CAUC1 Caucasian (31) 58 0.16 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 809 rs5361 SELE 6401 1 166432718 NM_000450 NP_000441 A/C S149R minus 6903932 776 SNP500CANCER AFR1 African / African-American (24) 48 0.02 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 810 rs5361 SELE 6401 1 166432718 NM_000450 NP_000441 A/C S149R minus 6903932 777 SNP500CANCER HISP1 Hispanic (23) 46 0.07 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 811 rs5361 SELE 6401 1 166432718 NM_000450 NP_000441 A/C S149R minus 6903932 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.06 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 812 rs5364 SELE 6401 1 166430305 NM_000450 NP_000441 A/G E295K minus 6829 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 813 rs5364 SELE 6401 1 166430305 NM_000450 NP_000441 A/G E295K minus 5111421 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.02 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 814 rs5364 SELE 6401 1 166430305 NM_000450 NP_000441 A/G E295K minus 5111421 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 815 rs5364 SELE 6401 1 166430305 NM_000450 NP_000441 A/G E295K minus 23189791 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 816 rs5364 SELE 6401 1 166430305 NM_000450 NP_000441 A/G E295K minus 23189791 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 817 rs5364 SELE 6401 1 166430305 NM_000450 NP_000441 A/G E295K minus 23189791 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 1 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 818 rs5366 SELE 6401 1 166428875 NM_000450 NP_000441 C/G E421Q minus 6831 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 819 rs5366 SELE 6401 1 166428875 NM_000450 NP_000441 C/G E421Q minus 5111425 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 46 0.04 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 820 rs5366 SELE 6401 1 166428875 NM_000450 NP_000441 C/G E421Q minus 5111425 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 821 rs5366 SELE 6401 1 166428875 NM_000450 NP_000441 C/G E421Q minus 23189733 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 822 rs5366 SELE 6401 1 166428875 NM_000450 NP_000441 C/G E421Q minus 23189733 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 823 rs5366 SELE 6401 1 166428875 NM_000450 NP_000441 C/G E421Q minus 23189733 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 1q22-q25 selectin E (endothelial adhesion molecule 1) 824 rs5368 SELE 6401 1 166428604 NM_000450 NP_000441 C/T H468Y minus 6833 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.05 123 "by submitter,freq,cluster" 1q22-q25 selectin E (endothelial adhesion molecule 1) 825 rs5368 SELE 6401 1 166428604 NM_000450 NP_000441 C/T H468Y minus 2984349 738 YUSUKE JBIC-ALLELE Japanese (752) 1478 0.19 123 "by submitter,freq,cluster" 1q22-q25 selectin E (endothelial adhesion molecule 1) 826 rs5368 SELE 6401 1 166428604 NM_000450 NP_000441 C/T H468Y minus 5111428 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.17 123 "by submitter,freq,cluster" 1q22-q25 selectin E (endothelial adhesion molecule 1) 827 rs5368 SELE 6401 1 166428604 NM_000450 NP_000441 C/T H468Y minus 5111428 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 44 0.02 123 "by submitter,freq,cluster" 1q22-q25 selectin E (endothelial adhesion molecule 1) 828 rs5368 SELE 6401 1 166428604 NM_000450 NP_000441 C/T H468Y minus 5111428 1303 SEQUENOM CEPH CEPH (92) 92 0.03 123 "by submitter,freq,cluster" 1q22-q25 selectin E (endothelial adhesion molecule 1) 829 rs5368 SELE 6401 1 166428604 NM_000450 NP_000441 C/T H468Y minus 23860569 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.02 123 "by submitter,freq,cluster" 1q22-q25 selectin E (endothelial adhesion molecule 1) 830 rs5368 SELE 6401 1 166428604 NM_000450 NP_000441 C/T H468Y minus 23860569 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.15 123 "by submitter,freq,cluster" 1q22-q25 selectin E (endothelial adhesion molecule 1) 831 rs5368 SELE 6401 1 166428604 NM_000450 NP_000441 C/T H468Y minus 23860569 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "by submitter,freq,cluster" 1q22-q25 selectin E (endothelial adhesion molecule 1) 832 rs5370 EDN1 1906 6 12404241 NM_001955 NP_001946 G/T K198N plus 6835 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.25 123 "by doubleHit,freq,cluster" 6p24.1 endothelin 1 833 rs5370 EDN1 1906 6 12404241 NM_001955 NP_001946 G/T K198N plus 2985752 738 YUSUKE JBIC-ALLELE Japanese (752) 1482 0.3 123 "by doubleHit,freq,cluster" 6p24.1 endothelin 1 834 rs5370 EDN1 1906 6 12404241 NM_001955 NP_001946 G/T K198N plus 3176606 619 WICVAR MITOGPOP6 CORIELL Mixed 54 0.2 123 "by doubleHit,freq,cluster" 6p24.1 endothelin 1 835 rs5370 EDN1 1906 6 12404241 NM_001955 NP_001946 G/T K198N plus 8819730 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.18 123 "by doubleHit,freq,cluster" 6p24.1 endothelin 1 836 rs5370 EDN1 1906 6 12404241 NM_001955 NP_001946 G/T K198N plus 8819730 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.29 123 "by doubleHit,freq,cluster" 6p24.1 endothelin 1 837 rs5370 EDN1 1906 6 12404241 NM_001955 NP_001946 G/T K198N plus 8819730 776 SNP500CANCER AFR1 African / African-American (24) 48 0.1 123 "by doubleHit,freq,cluster" 6p24.1 endothelin 1 838 rs5370 EDN1 1906 6 12404241 NM_001955 NP_001946 G/T K198N plus 8819730 777 SNP500CANCER HISP1 Hispanic (23) 44 0.02 123 "by doubleHit,freq,cluster" 6p24.1 endothelin 1 839 rs5370 EDN1 1906 6 12404241 NM_001955 NP_001946 G/T K198N plus 8819730 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.27 123 "by doubleHit,freq,cluster" 6p24.1 endothelin 1 840 rs5370 EDN1 1906 6 12404241 NM_001955 NP_001946 G/T K198N plus 14857936 693 EGP_SNPS PDR90 NIHPDR 144 0.23 123 "by doubleHit,freq,cluster" 6p24.1 endothelin 1 841 rs5370 EDN1 1906 6 12404241 NM_001955 NP_001946 G/T K198N plus 24787768 1303 SEQUENOM CEPH CEPH (92) 184 0.3 123 "by doubleHit,freq,cluster" 6p24.1 endothelin 1 842 rs5370 EDN1 1906 6 12404241 NM_001955 NP_001946 G/T K198N plus 24796004 1303 SEQUENOM CEPH CEPH (92) 184 0.24 123 "by doubleHit,freq,cluster" 6p24.1 endothelin 1 843 rs5370 EDN1 1906 6 12404241 NM_001955 NP_001946 G/T K198N plus 24796238 1303 SEQUENOM CEPH CEPH (92) 184 0.36 123 "by doubleHit,freq,cluster" 6p24.1 endothelin 1 844 rs5376 GALR1 2587 18 73109797 NM_001480 NP_001471 C/T S334N minus 6841 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.3 123 "HapMap,freq,cluster" 18q23 galanin receptor 1 845 rs5376 GALR1 2587 18 73109797 NM_001480 NP_001471 C/T S334N minus 2400771 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 123 "HapMap,freq,cluster" 18q23 galanin receptor 1 846 rs5376 GALR1 2587 18 73109797 NM_001480 NP_001471 C/T S334N minus 2400771 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "HapMap,freq,cluster" 18q23 galanin receptor 1 847 rs5376 GALR1 2587 18 73109797 NM_001480 NP_001471 C/T S334N minus 23615743 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "HapMap,freq,cluster" 18q23 galanin receptor 1 848 rs5376 GALR1 2587 18 73109797 NM_001480 NP_001471 C/T S334N minus 23615743 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.37 123 "HapMap,freq,cluster" 18q23 galanin receptor 1 849 rs5376 GALR1 2587 18 73109797 NM_001480 NP_001471 C/T S334N minus 23615743 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,freq,cluster" 18q23 galanin receptor 1 850 rs5377 GALR1 2587 18 73109821 NM_001480 NP_001471 C/T P342L plus 6842 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 18q23 galanin receptor 1 851 rs5377 GALR1 2587 18 73109821 NM_001480 NP_001471 C/T P342L plus 6842 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 18q23 galanin receptor 1 852 rs5388 GH1 2688 17 59348902 NM_000515 NP_000506 A/G V136I minus 6853 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 117 "HapMap,cluster" 17q24.2 growth hormone 1 853 rs5388 GH1 2688 17 59348902 NM_000515 NP_000506 A/G V136I minus 12587379 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 117 "HapMap,cluster" 17q24.2 growth hormone 1 854 rs5388 GH1 2688 17 59348902 NM_000515 NP_000506 A/G V136I minus 12587379 928 IBARROSO ELY UK (Ely region of East Anglia) 921 0.01 117 "HapMap,cluster" 17q24.2 growth hormone 1 855 rs5388 GH1 2688 17 59348902 NM_000515 NP_000506 A/G V136I minus 12587379 1303 SEQUENOM CEPH CEPH (92) 92 1 117 "HapMap,cluster" 17q24.2 growth hormone 1 856 rs5388 GH1 2688 17 59348902 NM_022559 NP_072053 A/G V121I minus 6853 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 117 "HapMap,cluster" 17q24.2 growth hormone 1 857 rs5388 GH1 2688 17 59348902 NM_022559 NP_072053 A/G V121I minus 12587379 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 117 "HapMap,cluster" 17q24.2 growth hormone 1 858 rs5388 GH1 2688 17 59348902 NM_022559 NP_072053 A/G V121I minus 12587379 928 IBARROSO ELY UK (Ely region of East Anglia) 921 0.01 117 "HapMap,cluster" 17q24.2 growth hormone 1 859 rs5388 GH1 2688 17 59348902 NM_022559 NP_072053 A/G V121I minus 12587379 1303 SEQUENOM CEPH CEPH (92) 92 1 117 "HapMap,cluster" 17q24.2 growth hormone 1 860 rs5388 GH1 2688 17 59348902 NM_022560 NP_072054 A/G V96I minus 6853 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 117 "HapMap,cluster" 17q24.2 growth hormone 1 861 rs5388 GH1 2688 17 59348902 NM_022560 NP_072054 A/G V96I minus 12587379 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 117 "HapMap,cluster" 17q24.2 growth hormone 1 862 rs5388 GH1 2688 17 59348902 NM_022560 NP_072054 A/G V96I minus 12587379 928 IBARROSO ELY UK (Ely region of East Anglia) 921 0.01 117 "HapMap,cluster" 17q24.2 growth hormone 1 863 rs5388 GH1 2688 17 59348902 NM_022560 NP_072054 A/G V96I minus 12587379 1303 SEQUENOM CEPH CEPH (92) 92 1 117 "HapMap,cluster" 17q24.2 growth hormone 1 864 rs5389 GH2 2689 17 59312144 NM_002059 NP_002050 A/T R90W minus 6854 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 17q24.2 growth hormone 2 865 rs5389 GH2 2689 17 59312144 NM_002059 NP_002050 A/T R90W minus 6854 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q24.2 growth hormone 2 866 rs5389 GH2 2689 17 59312144 NM_022556 NP_072050 A/T R75W minus 6854 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 17q24.2 growth hormone 2 867 rs5389 GH2 2689 17 59312144 NM_022556 NP_072050 A/T R75W minus 6854 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q24.2 growth hormone 2 868 rs5389 GH2 2689 17 59312144 NM_022557 NP_072051 A/T R90W minus 6854 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 17q24.2 growth hormone 2 869 rs5389 GH2 2689 17 59312144 NM_022557 NP_072051 A/T R90W minus 6854 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q24.2 growth hormone 2 870 rs5389 GH2 2689 17 59312144 NM_022558 NP_072052 A/T R90W minus 6854 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 17q24.2 growth hormone 2 871 rs5389 GH2 2689 17 59312144 NM_022558 NP_072052 A/T R90W minus 6854 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q24.2 growth hormone 2 872 rs5392 GIPR 2696 19 50872197 NM_000164 NP_000155 C/G L262V plus 6857 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 19q13.3 gastric inhibitory polypeptide receptor 873 rs5392 GIPR 2696 19 50872197 NM_000164 NP_000155 C/G L262V plus 6857 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 19q13.3 gastric inhibitory polypeptide receptor 874 rs5397 SLC2A2 6514 3 172198537 NM_000340 NP_000331 C/G L478V minus 6862 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 3q26.1-q26.2 "solute carrier family 2 (facilitated glucose transporter), member 2" 875 rs5397 SLC2A2 6514 3 172198537 NM_000340 NP_000331 C/G L478V minus 6862 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 3q26.1-q26.2 "solute carrier family 2 (facilitated glucose transporter), member 2" 876 rs5400 SLC2A2 6514 3 172215002 NM_000340 NP_000331 C/T T110I minus 6865 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 121 "HapMap,doubleHit,submitter,freq,cluster" 3q26.1-q26.2 "solute carrier family 2 (facilitated glucose transporter), member 2" 877 rs5400 SLC2A2 6514 3 172215002 NM_000340 NP_000331 C/T T110I minus 12587280 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.14 121 "HapMap,doubleHit,submitter,freq,cluster" 3q26.1-q26.2 "solute carrier family 2 (facilitated glucose transporter), member 2" 878 rs5400 SLC2A2 6514 3 172215002 NM_000340 NP_000331 C/T T110I minus 12587280 928 IBARROSO ELY UK (Ely region of East Anglia) 921 0.14 121 "HapMap,doubleHit,submitter,freq,cluster" 3q26.1-q26.2 "solute carrier family 2 (facilitated glucose transporter), member 2" 879 rs5400 SLC2A2 6514 3 172215002 NM_000340 NP_000331 C/T T110I minus 19544170 1303 SEQUENOM CEPH CEPH (92) 92 0.3 121 "HapMap,doubleHit,submitter,freq,cluster" 3q26.1-q26.2 "solute carrier family 2 (facilitated glucose transporter), member 2" 880 rs5444 GNB3 2784 12 6826316 NM_002075 NP_002066 G/T W339L plus 6909 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 HapMap 12p13 "guanine nucleotide binding protein (G protein), beta polypeptide 3" 881 rs5444 GNB3 2784 12 6826316 NM_002075 NP_002066 G/T W339L plus 6909 885 TSC-CSHL HapMap-CEPH-30-trios 114 1 52 HapMap 12p13 "guanine nucleotide binding protein (G protein), beta polypeptide 3" 882 rs5444 GNB3 2784 12 6826316 NM_002075 NP_002066 G/T W339L plus 6909 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 12p13 "guanine nucleotide binding protein (G protein), beta polypeptide 3" 883 rs5450 GYS1 2997 19 54164879 NM_002103 NP_002094 C/G E619Q minus 6915 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 19q13.3 glycogen synthase 1 (muscle) 884 rs5450 GYS1 2997 19 54164879 NM_002103 NP_002094 C/G E619Q minus 6915 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 19q13.3 glycogen synthase 1 (muscle) 885 rs5453 GYS1 2997 19 54164500 NM_002103 NP_002094 C/G P691A minus 6918 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 123 "by cluster,freq" 19q13.3 glycogen synthase 1 (muscle) 886 rs5453 GYS1 2997 19 54164500 NM_002103 NP_002094 C/G P691A minus 6918 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 19q13.3 glycogen synthase 1 (muscle) 887 rs5455 GYS1 2997 19 54182431 NM_002103 NP_002094 C/G I108M minus 6920 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 HapMap 19q13.3 glycogen synthase 1 (muscle) 888 rs5455 GYS1 2997 19 54182431 NM_002103 NP_002094 C/G I108M minus 6920 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 19q13.3 glycogen synthase 1 (muscle) 889 rs5455 GYS1 2997 19 54182431 NM_002103 NP_002094 C/G I108M minus 6920 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 19q13.3 glycogen synthase 1 (muscle) 890 rs5456 GYS1 2997 19 54182367 NM_002103 NP_002094 A/G K130E minus 6921 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 52 by freq 19q13.3 glycogen synthase 1 (muscle) 891 rs5456 GYS1 2997 19 54182367 NM_002103 NP_002094 A/G K130E minus 6921 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 19q13.3 glycogen synthase 1 (muscle) 892 rs5461 GYS1 2997 19 54177882 NM_002103 NP_002094 A/G N283S minus 6926 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 19q13.3 glycogen synthase 1 (muscle) 893 rs5461 GYS1 2997 19 54177882 NM_002103 NP_002094 A/G N283S minus 6926 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 19q13.3 glycogen synthase 1 (muscle) 894 rs5465 GYS1 2997 19 54176692 NM_002103 NP_002094 A/G E359G minus 6930 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 52 by freq 19q13.3 glycogen synthase 1 (muscle) 895 rs5465 GYS1 2997 19 54176692 NM_002103 NP_002094 A/G E359G minus 6930 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 52 by freq 19q13.3 glycogen synthase 1 (muscle) 896 rs5465 GYS1 2997 19 54176692 NM_002103 NP_002094 A/G E359G minus 6930 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.06 52 by freq 19q13.3 glycogen synthase 1 (muscle) 897 rs5465 GYS1 2997 19 54176692 NM_002103 NP_002094 A/G E359G minus 6930 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 52 by freq 19q13.3 glycogen synthase 1 (muscle) 898 rs5465 GYS1 2997 19 54176692 NM_002103 NP_002094 A/G E359G minus 6930 1303 SEQUENOM CEPH CEPH (92) 92 0.48 52 by freq 19q13.3 glycogen synthase 1 (muscle) 899 rs5491 ICAM1 3383 19 10246540 NM_000201 NP_000192 A/T K56M plus 6956 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.35 123 "HapMap,submitter,freq,cluster" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 900 rs5491 ICAM1 3383 19 10246540 NM_000201 NP_000192 A/T K56M plus 3172764 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 60 1 123 "HapMap,submitter,freq,cluster" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 901 rs5491 ICAM1 3383 19 10246540 NM_000201 NP_000192 A/T K56M plus 5586604 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.06 123 "HapMap,submitter,freq,cluster" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 902 rs5491 ICAM1 3383 19 10246540 NM_000201 NP_000192 A/T K56M plus 5586604 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.02 123 "HapMap,submitter,freq,cluster" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 903 rs5491 ICAM1 3383 19 10246540 NM_000201 NP_000192 A/T K56M plus 5586604 776 SNP500CANCER AFR1 African / African-American (24) 48 0.15 123 "HapMap,submitter,freq,cluster" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 904 rs5491 ICAM1 3383 19 10246540 NM_000201 NP_000192 A/T K56M plus 5586604 777 SNP500CANCER HISP1 Hispanic (23) 44 0.07 123 "HapMap,submitter,freq,cluster" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 905 rs5491 ICAM1 3383 19 10246540 NM_000201 NP_000192 A/T K56M plus 5586604 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.04 123 "HapMap,submitter,freq,cluster" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 906 rs5491 ICAM1 3383 19 10246540 NM_000201 NP_000192 A/T K56M plus 5586604 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 123 "HapMap,submitter,freq,cluster" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 907 rs5491 ICAM1 3383 19 10246540 NM_000201 NP_000192 A/T K56M plus 5586604 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "HapMap,submitter,freq,cluster" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 908 rs5491 ICAM1 3383 19 10246540 NM_000201 NP_000192 A/T K56M plus 7985433 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.35 123 "HapMap,submitter,freq,cluster" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 909 rs5491 ICAM1 3383 19 10246540 NM_000201 NP_000192 A/T K56M plus 23403416 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "HapMap,submitter,freq,cluster" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 910 rs5491 ICAM1 3383 19 10246540 NM_000201 NP_000192 A/T K56M plus 23403416 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.35 123 "HapMap,submitter,freq,cluster" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 911 rs5491 ICAM1 3383 19 10246540 NM_000201 NP_000192 A/T K56M plus 23403416 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.1 123 "HapMap,submitter,freq,cluster" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 912 rs5492 ICAM1 3383 19 10255290 NM_000201 NP_000192 C/G K155N plus 6957 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 913 rs5492 ICAM1 3383 19 10255290 NM_000201 NP_000192 C/G K155N plus 6957 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 914 rs5495 ICAM1 3383 19 10256096 NM_000201 NP_000192 A/G V315M plus 6960 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 915 rs5498 ICAM1 3383 19 10256683 NM_000201 NP_000192 A/G K469E plus 6963 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.3 123 "by cluster,freq" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 916 rs5498 ICAM1 3383 19 10256683 NM_000201 NP_000192 A/G K469E plus 3172763 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 62 0.34 123 "by cluster,freq" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 917 rs5498 ICAM1 3383 19 10256683 NM_000201 NP_000192 A/G K469E plus 4328201 649 FHCRC POPU1 USA (20) 40 0.33 123 "by cluster,freq" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 918 rs5498 ICAM1 3383 19 10256683 NM_000201 NP_000192 A/G K469E plus 7985472 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.13 123 "by cluster,freq" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 919 rs5498 ICAM1 3383 19 10256683 NM_000201 NP_000192 A/G K469E plus 7985472 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 42 0.36 123 "by cluster,freq" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 920 rs5498 ICAM1 3383 19 10256683 NM_000201 NP_000192 A/G K469E plus 7985472 1303 SEQUENOM CEPH CEPH (92) 92 0.48 123 "by cluster,freq" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 921 rs5498 ICAM1 3383 19 10256683 NM_000201 NP_000192 A/G K469E plus 24796638 1303 SEQUENOM CEPH CEPH (92) 184 0.39 123 "by cluster,freq" 19p13.3-p13.2 "intercellular adhesion molecule 1 (CD54), human rhinovirus receptor" 922 rs5503 ICAM2 3384 17 59436418 NM_000873 NP_000864 A/G A37T minus 6968 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 102 "by submitter,freq,cluster" 17q23-q25 intercellular adhesion molecule 2 923 rs5503 ICAM2 3384 17 59436418 NM_000873 NP_000864 A/G A37T minus 3178070 619 WICVAR MITOGPOP6 CORIELL Mixed 42 0.05 102 "by submitter,freq,cluster" 17q23-q25 intercellular adhesion molecule 2 924 rs5504 ICAM2 3384 17 59434789 NM_000873 NP_000864 A/G R199H minus 6969 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 17q23-q25 intercellular adhesion molecule 2 925 rs5504 ICAM2 3384 17 59434789 NM_000873 NP_000864 A/G R199H minus 6969 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q23-q25 intercellular adhesion molecule 2 926 rs5515 KLK1 3816 19 56015488 NM_002257 NP_002248 A/G R77H minus 6981 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 927 rs5515 KLK1 3816 19 56015488 NM_002257 NP_002248 A/G R77H minus 4473299 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 40 0.05 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 928 rs5515 KLK1 3816 19 56015488 NM_002257 NP_002248 A/G R77H minus 4473299 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 42 0.02 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 929 rs5515 KLK1 3816 19 56015488 NM_002257 NP_002248 A/G R77H minus 4473299 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 930 rs5515 KLK1 3816 19 56015488 NM_002257 NP_002248 A/G R77H minus 23765842 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.02 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 931 rs5515 KLK1 3816 19 56015488 NM_002257 NP_002248 A/G R77H minus 23765842 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.09 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 932 rs5515 KLK1 3816 19 56015488 NM_002257 NP_002248 A/G R77H minus 23765842 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 1 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 933 rs5516 KLK1 3816 19 56015285 NM_002257 NP_002248 C/G E145Q minus 6982 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.35 123 "HapMap,doubleHit,freq,cluster" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 934 rs5516 KLK1 3816 19 56015285 NM_002257 NP_002248 C/G E145Q minus 3250359 738 YUSUKE JBIC-ALLELE Japanese (752) 1436 0.23 123 "HapMap,doubleHit,freq,cluster" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 935 rs5516 KLK1 3816 19 56015285 NM_002257 NP_002248 C/G E145Q minus 4473301 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 44 0.39 123 "HapMap,doubleHit,freq,cluster" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 936 rs5516 KLK1 3816 19 56015285 NM_002257 NP_002248 C/G E145Q minus 4473301 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 42 0.36 123 "HapMap,doubleHit,freq,cluster" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 937 rs5516 KLK1 3816 19 56015285 NM_002257 NP_002248 C/G E145Q minus 4473301 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.36 123 "HapMap,doubleHit,freq,cluster" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 938 rs5516 KLK1 3816 19 56015285 NM_002257 NP_002248 C/G E145Q minus 4473301 1303 SEQUENOM CEPH CEPH (92) 92 0.11 123 "HapMap,doubleHit,freq,cluster" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 939 rs5516 KLK1 3816 19 56015285 NM_002257 NP_002248 C/G E145Q minus 23765836 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.3 123 "HapMap,doubleHit,freq,cluster" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 940 rs5516 KLK1 3816 19 56015285 NM_002257 NP_002248 C/G E145Q minus 23765836 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.37 123 "HapMap,doubleHit,freq,cluster" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 941 rs5516 KLK1 3816 19 56015285 NM_002257 NP_002248 C/G E145Q minus 23765836 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.17 123 "HapMap,doubleHit,freq,cluster" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 942 rs5517 KLK1 3816 19 56015044 NM_002257 NP_002248 A/G K186E minus 6983 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.25 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 943 rs5517 KLK1 3816 19 56015044 NM_002257 NP_002248 A/G K186E minus 4473304 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.15 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 944 rs5517 KLK1 3816 19 56015044 NM_002257 NP_002248 A/G K186E minus 4473304 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 44 0.3 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 945 rs5517 KLK1 3816 19 56015044 NM_002257 NP_002248 A/G K186E minus 4473304 1303 SEQUENOM CEPH CEPH (92) 92 0.19 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 946 rs5517 KLK1 3816 19 56015044 NM_002257 NP_002248 A/G K186E minus 5005733 738 YUSUKE JBIC-ALLELE Japanese (752) 1496 0.5 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 947 rs5517 KLK1 3816 19 56015044 NM_002257 NP_002248 A/G K186E minus 24197628 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.3 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 948 rs5517 KLK1 3816 19 56015044 NM_002257 NP_002248 A/G K186E minus 24197628 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.15 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 949 rs5517 KLK1 3816 19 56015044 NM_002257 NP_002248 A/G K186E minus 24197628 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "by cluster,freq" 19q13.3 "kallikrein 1, renal/pancreas/salivary" 950 rs5518 KLK1 3816 19 56015022 NM_002257 NP_002248 A/T V193E minus 6984 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 19q13.3 "kallikrein 1, renal/pancreas/salivary" 951 rs5518 KLK1 3816 19 56015022 NM_002257 NP_002248 A/T V193E minus 6984 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 19q13.3 "kallikrein 1, renal/pancreas/salivary" 952 rs5522 NR3C2 4306 4 149715080 NM_000901 NP_000892 A/G V180I minus 6988 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.2 123 "by submitter,freq,cluster" 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 953 rs5522 NR3C2 4306 4 149715080 NM_000901 NP_000892 A/G V180I minus 10110564 901 AFFY AfAm 12 0.25 123 "by submitter,freq,cluster" 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 954 rs5522 NR3C2 4306 4 149715080 NM_000901 NP_000892 A/G V180I minus 10110564 902 AFFY Caucasian 24 0.08 123 "by submitter,freq,cluster" 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 955 rs5522 NR3C2 4306 4 149715080 NM_000901 NP_000892 A/G V180I minus 10110564 903 AFFY Asian 12 0.17 123 "by submitter,freq,cluster" 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 956 rs5522 NR3C2 4306 4 149715080 NM_000901 NP_000892 A/G V180I minus 10110564 904 AFFY CEPH 12 1 123 "by submitter,freq,cluster" 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 957 rs5522 NR3C2 4306 4 149715080 NM_000901 NP_000892 A/G V180I minus 10110564 905 AFFY PDpanel 48 0.1 123 "by submitter,freq,cluster" 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 958 rs5522 NR3C2 4306 4 149715080 NM_000901 NP_000892 A/G V180I minus 22887609 1303 SEQUENOM CEPH CEPH (92) 92 0.22 123 "by submitter,freq,cluster" 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 959 rs5522 NR3C2 4306 4 149715080 NM_000901 NP_000892 A/G V180I minus 23731817 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.07 123 "by submitter,freq,cluster" 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 960 rs5522 NR3C2 4306 4 149715080 NM_000901 NP_000892 A/G V180I minus 23731817 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.13 123 "by submitter,freq,cluster" 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 961 rs5522 NR3C2 4306 4 149715080 NM_000901 NP_000892 A/G V180I minus 23731817 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.1 123 "by submitter,freq,cluster" 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 962 rs5523 NR3C2 4306 4 149714287 NM_000901 NP_000892 A/C N444T minus 6989 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 HapMap 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 963 rs5523 NR3C2 4306 4 149714287 NM_000901 NP_000892 A/C N444T minus 6989 885 TSC-CSHL HapMap-CEPH-30-trios 118 1 52 HapMap 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 964 rs5523 NR3C2 4306 4 149714287 NM_000901 NP_000892 A/C N444T minus 6989 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 965 rs5526 NR3C2 4306 4 149714008 NM_000901 NP_000892 A/G R537Q minus 6992 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 966 rs5526 NR3C2 4306 4 149714008 NM_000901 NP_000892 A/G R537Q minus 6992 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 967 rs5527 NR3C2 4306 4 149713957 NM_000901 NP_000892 A/G N554S minus 6993 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 121 "by cluster,freq" 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 968 rs5527 NR3C2 4306 4 149713957 NM_000901 NP_000892 A/G N554S minus 22887611 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "by cluster,freq" 4q31.1 "nuclear receptor subfamily 3, group C, member 2" 969 rs5557 SLC8A1 6546 2 40303739 NM_021097 NP_066920 A/T E692V minus 7023 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 2p23-p22 "solute carrier family 8 (sodium/calcium exchanger), member 1" 970 rs5557 SLC8A1 6546 2 40303739 NM_021097 NP_066920 A/T E692V minus 7023 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 2p23-p22 "solute carrier family 8 (sodium/calcium exchanger), member 1" 971 rs5558 SLC6A2 6530 16 54291060 NM_001043 NP_001034 G/T F528C plus 7024 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 123 "by cluster,freq" 16q12.2 "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" 972 rs5558 SLC6A2 6530 16 54291060 NM_001043 NP_001034 G/T F528C plus 7024 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 16q12.2 "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" 973 rs5558 SLC6A2 6530 16 54291060 NM_001043 NP_001034 G/T F528C plus 24811976 1303 SEQUENOM CEPH CEPH (92) 184 0.17 123 "by cluster,freq" 16q12.2 "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" 974 rs5559 SLC6A2 6530 16 54291603 NM_001043 NP_001034 C/T Y548H plus 7025 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 52 by freq 16q12.2 "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" 975 rs5559 SLC6A2 6530 16 54291603 NM_001043 NP_001034 C/T Y548H plus 7025 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 16q12.2 "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" 976 rs5563 SLC6A2 6530 16 54283422 NM_001043 NP_001034 A/C N292T plus 7029 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 52 by freq 16q12.2 "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" 977 rs5563 SLC6A2 6530 16 54283422 NM_001043 NP_001034 A/C N292T plus 7029 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 16q12.2 "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" 978 rs5565 SLC6A2 6530 16 54286734 NM_001043 NP_001034 C/G V356L plus 7031 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 52 by freq 16q12.2 "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" 979 rs5565 SLC6A2 6530 16 54286734 NM_001043 NP_001034 C/G V356L plus 7031 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 16q12.2 "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" 980 rs5566 SLC6A2 6530 16 54286773 NM_001043 NP_001034 C/G A369P plus 7032 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 16q12.2 "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" 981 rs5566 SLC6A2 6530 16 54286773 NM_001043 NP_001034 C/G A369P plus 7032 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 16q12.2 "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" 982 rs5567 SLC6A2 6530 16 54286792 NM_001043 NP_001034 A/G N375S plus 7033 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 52 by freq 16q12.2 "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" 983 rs5567 SLC6A2 6530 16 54286792 NM_001043 NP_001034 A/G N375S plus 7033 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 16q12.2 "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" 984 rs5570 SLC6A2 6530 16 54289437 NM_001043 NP_001034 A/G K463R plus 7036 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 52 by freq 16q12.2 "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" 985 rs5571 NPY 4852 7 24098163 NM_000905 NP_000896 A/C L22M plus 7037 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 7p15.1 neuropeptide Y 986 rs5571 NPY 4852 7 24098163 NM_000905 NP_000896 A/C L22M plus 7037 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 7p15.1 neuropeptide Y 987 rs5584 PTGIS 5740 20 47557869 NM_000961 NP_000952 C/T P500S minus 7050 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 20q13.11-q13.13 prostaglandin I2 (prostacyclin) synthase 988 rs5623 PTGIS 5740 20 47594309 NM_000961 NP_000952 A/C E154A minus 7090 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 20q13.11-q13.13 prostaglandin I2 (prostacyclin) synthase 989 rs5623 PTGIS 5740 20 47594309 NM_000961 NP_000952 A/C E154A minus 7090 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 20q13.11-q13.13 prostaglandin I2 (prostacyclin) synthase 990 rs5624 PTGIS 5740 20 47594259 NM_000961 NP_000952 C/T F171L minus 7091 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 20q13.11-q13.13 prostaglandin I2 (prostacyclin) synthase 991 rs5626 PTGIS 5740 20 47574151 NM_000961 NP_000952 C/T R236C minus 7093 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 20q13.11-q13.13 prostaglandin I2 (prostacyclin) synthase 992 rs5626 PTGIS 5740 20 47574151 NM_000961 NP_000952 C/T R236C minus 7093 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 20q13.11-q13.13 prostaglandin I2 (prostacyclin) synthase 993 rs5632 PLA2G1B 5319 12 119226531 NM_000928 NP_000919 A/C D16A minus 7099 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 52 by freq 12q23-q24.1 "phospholipase A2, group IB (pancreas)" 994 rs5632 PLA2G1B 5319 12 119226531 NM_000928 NP_000919 A/C D16A minus 7099 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 12q23-q24.1 "phospholipase A2, group IB (pancreas)" 995 rs5636 PLA2G1B 5319 12 119225512 NM_000928 NP_000919 A/C N89K minus 7103 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 52 by freq 12q23-q24.1 "phospholipase A2, group IB (pancreas)" 996 rs5636 PLA2G1B 5319 12 119225512 NM_000928 NP_000919 A/C N89K minus 7103 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 12q23-q24.1 "phospholipase A2, group IB (pancreas)" 997 rs5639 PNMT 5409 17 35079881 NM_002686 NP_002677 A/T S188C plus 7106 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 52 by freq 17q21-q22 phenylethanolamine N-methyltransferase 998 rs5639 PNMT 5409 17 35079881 NM_002686 NP_002677 A/T S188C plus 7106 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q21-q22 phenylethanolamine N-methyltransferase 999 rs5640 PNMT 5409 17 35079951 NM_002686 NP_002677 A/T L211H plus 7107 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.15 52 by freq 17q21-q22 phenylethanolamine N-methyltransferase 1000 rs5640 PNMT 5409 17 35079951 NM_002686 NP_002677 A/T L211H plus 7107 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q21-q22 phenylethanolamine N-methyltransferase 1001 rs5641 PNMT 5409 17 35079969 NM_002686 NP_002677 A/T L217Q plus 7108 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.1 123 "by cluster,freq" 17q21-q22 phenylethanolamine N-methyltransferase 1002 rs5642 PNMT 5409 17 35080080 NM_002686 NP_002677 A/G R254H plus 7109 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 17q21-q22 phenylethanolamine N-methyltransferase 1003 rs5642 PNMT 5409 17 35080080 NM_002686 NP_002677 A/G R254H plus 7109 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 17q21-q22 phenylethanolamine N-methyltransferase 1004 rs5643 PNMT 5409 17 35080145 NM_002686 NP_002677 A/T W276R plus 7110 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 17q21-q22 phenylethanolamine N-methyltransferase 1005 rs5643 PNMT 5409 17 35080145 NM_002686 NP_002677 A/T W276R plus 7110 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q21-q22 phenylethanolamine N-methyltransferase 1006 rs5650 GCG 2641 2 162827605 NM_002054 NP_002045 C/T A115V minus 7117 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 2q36-q37 glucagon 1007 rs5650 GCG 2641 2 162827605 NM_002054 NP_002045 C/T A115V minus 7117 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 2q36-q37 glucagon 1008 rs5658 TRH 7200 3 131177379 NM_007117 NP_009048 C/G L8V minus 7125 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.1 123 "by doubleHit,freq,cluster" 3q13.3-q21 thyrotropin-releasing hormone 1009 rs5658 TRH 7200 3 131177379 NM_007117 NP_009048 C/G L8V minus 1987777 1303 SEQUENOM CEPH CEPH (92) 92 0.16 123 "by doubleHit,freq,cluster" 3q13.3-q21 thyrotropin-releasing hormone 1010 rs5658 TRH 7200 3 131177379 NM_007117 NP_009048 C/G L8V minus 24164282 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.13 123 "by doubleHit,freq,cluster" 3q13.3-q21 thyrotropin-releasing hormone 1011 rs5658 TRH 7200 3 131177379 NM_007117 NP_009048 C/G L8V minus 24164282 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.2 123 "by doubleHit,freq,cluster" 3q13.3-q21 thyrotropin-releasing hormone 1012 rs5658 TRH 7200 3 131177379 NM_007117 NP_009048 C/G L8V minus 24164282 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "by doubleHit,freq,cluster" 3q13.3-q21 thyrotropin-releasing hormone 1013 rs5670 PTGER3 5733 1 71224777 NM_000957 NP_000948 A/T M169L minus 7137 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1014 rs5670 PTGER3 5733 1 71224777 NM_000957 NP_000948 A/T M169L minus 7137 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1015 rs5670 PTGER3 5733 1 71224777 NM_198712 NP_942005 A/T M169L minus 7137 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1016 rs5670 PTGER3 5733 1 71224777 NM_198712 NP_942005 A/T M169L minus 7137 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1017 rs5670 PTGER3 5733 1 71224777 NM_198713 NP_942006 A/T M169L minus 7137 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1018 rs5670 PTGER3 5733 1 71224777 NM_198713 NP_942006 A/T M169L minus 7137 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1019 rs5670 PTGER3 5733 1 71224777 NM_198714 NP_942007 A/T M169L minus 7137 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1020 rs5670 PTGER3 5733 1 71224777 NM_198714 NP_942007 A/T M169L minus 7137 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1021 rs5670 PTGER3 5733 1 71224777 NM_198715 NP_942008 A/T M169L minus 7137 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1022 rs5670 PTGER3 5733 1 71224777 NM_198715 NP_942008 A/T M169L minus 7137 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1023 rs5670 PTGER3 5733 1 71224777 NM_198716 NP_942009 A/T M169L minus 7137 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1024 rs5670 PTGER3 5733 1 71224777 NM_198716 NP_942009 A/T M169L minus 7137 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1025 rs5670 PTGER3 5733 1 71224777 NM_198717 NP_942010 A/T M169L minus 7137 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1026 rs5670 PTGER3 5733 1 71224777 NM_198717 NP_942010 A/T M169L minus 7137 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1027 rs5670 PTGER3 5733 1 71224777 NM_198718 NP_942011 A/T M169L minus 7137 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1028 rs5670 PTGER3 5733 1 71224777 NM_198718 NP_942011 A/T M169L minus 7137 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1029 rs5670 PTGER3 5733 1 71224777 NM_198719 NP_942012 A/T M169L minus 7137 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1030 rs5670 PTGER3 5733 1 71224777 NM_198719 NP_942012 A/T M169L minus 7137 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1031 rs5670 PTGER3 5733 1 71224777 NM_198720 NP_942013 A/T M169L minus 7137 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1032 rs5670 PTGER3 5733 1 71224777 NM_198720 NP_942013 A/T M169L minus 7137 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1033 rs5694 PTGER3 5733 1 71152046 NM_198714 NP_942007 C/T P375L minus 7162 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1034 rs5694 PTGER3 5733 1 71152046 NM_198714 NP_942007 C/T P375L minus 7162 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1035 rs5694 PTGER3 5733 1 71152046 NM_198714 NP_942007 C/T P375L minus 7162 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1036 rs5694 PTGER3 5733 1 71152046 NM_198714 NP_942007 C/T P375L minus 7162 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1037 rs5694 PTGER3 5733 1 71152046 NM_198714 NP_942007 C/T P375L minus 7162 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1038 rs5694 PTGER3 5733 1 71152046 NM_198719 NP_942012 C/T P375L minus 7162 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1039 rs5694 PTGER3 5733 1 71152046 NM_198719 NP_942012 C/T P375L minus 7162 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1040 rs5694 PTGER3 5733 1 71152046 NM_198719 NP_942012 C/T P375L minus 7162 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1041 rs5694 PTGER3 5733 1 71152046 NM_198719 NP_942012 C/T P375L minus 7162 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1042 rs5694 PTGER3 5733 1 71152046 NM_198719 NP_942012 C/T P375L minus 7162 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1043 rs5694 PTGER3 5733 1 71152046 NM_198720 NP_942013 C/T P375L minus 7162 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1044 rs5694 PTGER3 5733 1 71152046 NM_198720 NP_942013 C/T P375L minus 7162 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1045 rs5694 PTGER3 5733 1 71152046 NM_198720 NP_942013 C/T P375L minus 7162 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1046 rs5694 PTGER3 5733 1 71152046 NM_198720 NP_942013 C/T P375L minus 7162 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1047 rs5694 PTGER3 5733 1 71152046 NM_198720 NP_942013 C/T P375L minus 7162 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p31.2 prostaglandin E receptor 3 (subtype EP3) 1048 rs5713 SAH 6296 16 20694741 NM_005622 NP_005613 C/T L100P plus 7181 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 123 "HapMap,freq" 16p13.11 SA hypertension-associated homolog (rat) 1049 rs5713 SAH 6296 16 20694741 NM_005622 NP_005613 C/T L100P plus 7181 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.02 123 "HapMap,freq" 16p13.11 SA hypertension-associated homolog (rat) 1050 rs5713 SAH 6296 16 20694741 NM_005622 NP_005613 C/T L100P plus 7181 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "HapMap,freq" 16p13.11 SA hypertension-associated homolog (rat) 1051 rs5713 SAH 6296 16 20694741 NM_005622 NP_005613 C/T L100P plus 24390848 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "HapMap,freq" 16p13.11 SA hypertension-associated homolog (rat) 1052 rs5713 SAH 6296 16 20694741 NM_005622 NP_005613 C/T L100P plus 24390848 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "HapMap,freq" 16p13.11 SA hypertension-associated homolog (rat) 1053 rs5713 SAH 6296 16 20694741 NM_005622 NP_005613 C/T L100P plus 24390848 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,freq" 16p13.11 SA hypertension-associated homolog (rat) 1054 rs5713 SAH 6296 16 20694741 NM_202000 NP_973729 C/T L100P plus 7181 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 123 "HapMap,freq" 16p13.11 SA hypertension-associated homolog (rat) 1055 rs5713 SAH 6296 16 20694741 NM_202000 NP_973729 C/T L100P plus 7181 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.02 123 "HapMap,freq" 16p13.11 SA hypertension-associated homolog (rat) 1056 rs5713 SAH 6296 16 20694741 NM_202000 NP_973729 C/T L100P plus 7181 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "HapMap,freq" 16p13.11 SA hypertension-associated homolog (rat) 1057 rs5713 SAH 6296 16 20694741 NM_202000 NP_973729 C/T L100P plus 24390848 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "HapMap,freq" 16p13.11 SA hypertension-associated homolog (rat) 1058 rs5713 SAH 6296 16 20694741 NM_202000 NP_973729 C/T L100P plus 24390848 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "HapMap,freq" 16p13.11 SA hypertension-associated homolog (rat) 1059 rs5713 SAH 6296 16 20694741 NM_202000 NP_973729 C/T L100P plus 24390848 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,freq" 16p13.11 SA hypertension-associated homolog (rat) 1060 rs5716 SAH 6296 16 20703888 NM_005622 NP_005613 C/G K367N plus 7184 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.05 123 "HapMap,submitter,freq,cluster" 16p13.11 SA hypertension-associated homolog (rat) 1061 rs5716 SAH 6296 16 20703888 NM_005622 NP_005613 C/G K367N plus 7184 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.05 123 "HapMap,submitter,freq,cluster" 16p13.11 SA hypertension-associated homolog (rat) 1062 rs5716 SAH 6296 16 20703888 NM_005622 NP_005613 C/G K367N plus 22887660 1303 SEQUENOM CEPH CEPH (92) 92 0.08 123 "HapMap,submitter,freq,cluster" 16p13.11 SA hypertension-associated homolog (rat) 1063 rs5716 SAH 6296 16 20703888 NM_005622 NP_005613 C/G K367N plus 23958775 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.08 123 "HapMap,submitter,freq,cluster" 16p13.11 SA hypertension-associated homolog (rat) 1064 rs5716 SAH 6296 16 20703888 NM_005622 NP_005613 C/G K367N plus 23958775 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "HapMap,submitter,freq,cluster" 16p13.11 SA hypertension-associated homolog (rat) 1065 rs5716 SAH 6296 16 20703888 NM_005622 NP_005613 C/G K367N plus 23958775 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "HapMap,submitter,freq,cluster" 16p13.11 SA hypertension-associated homolog (rat) 1066 rs5716 SAH 6296 16 20703888 NM_202000 NP_973729 C/G K367N plus 7184 499 ARAVINDA HYP3 "Harare, Zimbabwe (80), Tecumseh, Michigan (64) and CEPH (4)" 148 0.05 123 "HapMap,submitter,freq,cluster" 16p13.11 SA hypertension-associated homolog (rat) 1067 rs5716 SAH 6296 16 20703888 NM_202000 NP_973729 C/G K367N plus 7184 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.05 123 "HapMap,submitter,freq,cluster" 16p13.11 SA hypertension-associated homolog (rat) 1068 rs5716 SAH 6296 16 20703888 NM_202000 NP_973729 C/G K367N plus 22887660 1303 SEQUENOM CEPH CEPH (92) 92 0.08 123 "HapMap,submitter,freq,cluster" 16p13.11 SA hypertension-associated homolog (rat) 1069 rs5716 SAH 6296 16 20703888 NM_202000 NP_973729 C/G K367N plus 23958775 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.08 123 "HapMap,submitter,freq,cluster" 16p13.11 SA hypertension-associated homolog (rat) 1070 rs5716 SAH 6296 16 20703888 NM_202000 NP_973729 C/G K367N plus 23958775 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "HapMap,submitter,freq,cluster" 16p13.11 SA hypertension-associated homolog (rat) 1071 rs5716 SAH 6296 16 20703888 NM_202000 NP_973729 C/G K367N plus 23958775 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "HapMap,submitter,freq,cluster" 16p13.11 SA hypertension-associated homolog (rat) 1072 rs5733 SCNN1G 6340 16 23105238 NM_001039 NP_001030 G/T G49C plus 7202 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.1 52 by freq 16p12 "sodium channel, nonvoltage-gated 1, gamma" 1073 rs5733 SCNN1G 6340 16 23105238 NM_001039 NP_001030 G/T G49C plus 7202 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 16p12 "sodium channel, nonvoltage-gated 1, gamma" 1074 rs5736 SCNN1G 6340 16 23108422 NM_001039 NP_001030 A/G G183S plus 7205 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 by freq 16p12 "sodium channel, nonvoltage-gated 1, gamma" 1075 rs5736 SCNN1G 6340 16 23108422 NM_001039 NP_001030 A/G G183S plus 7205 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 16p12 "sodium channel, nonvoltage-gated 1, gamma" 1076 rs5736 SCNN1G 6340 16 23108422 NM_001039 NP_001030 A/G G183S plus 23437191 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 by freq 16p12 "sodium channel, nonvoltage-gated 1, gamma" 1077 rs5736 SCNN1G 6340 16 23108422 NM_001039 NP_001030 A/G G183S plus 23437191 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.07 123 by freq 16p12 "sodium channel, nonvoltage-gated 1, gamma" 1078 rs5736 SCNN1G 6340 16 23108422 NM_001039 NP_001030 A/G G183S plus 23437191 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 by freq 16p12 "sodium channel, nonvoltage-gated 1, gamma" 1079 rs5743 TBXA2R 6915 19 3551431 NM_001060 NP_001051 A/T C68S minus 7212 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 123 "by cluster,freq" 19p13.3 thromboxane A2 receptor 1080 rs5743 TBXA2R 6915 19 3551431 NM_001060 NP_001051 A/T C68S minus 7212 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 19p13.3 thromboxane A2 receptor 1081 rs5744 TBXA2R 6915 19 3551394 NM_001060 NP_001051 A/T V80E minus 7213 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 19p13.3 thromboxane A2 receptor 1082 rs5746 TBXA2R 6915 19 3551352 NM_001060 NP_001051 A/T E94V minus 7215 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 123 "by cluster,freq" 19p13.3 thromboxane A2 receptor 1083 rs5746 TBXA2R 6915 19 3551352 NM_001060 NP_001051 A/T E94V minus 7215 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 19p13.3 thromboxane A2 receptor 1084 rs5749 TBXA2R 6915 19 3551155 NM_001060 NP_001051 A/G A160T minus 7218 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 19p13.3 thromboxane A2 receptor 1085 rs5750 TBXA2R 6915 19 3551106 NM_001060 NP_001051 A/T V176E minus 7219 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 19p13.3 thromboxane A2 receptor 1086 rs5750 TBXA2R 6915 19 3551106 NM_001060 NP_001051 A/T V176E minus 7219 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 19p13.3 thromboxane A2 receptor 1087 rs5751 TBXA2R 6915 19 3550984 NM_001060 NP_001051 A/G V217I minus 7220 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 19p13.3 thromboxane A2 receptor 1088 rs5751 TBXA2R 6915 19 3550984 NM_001060 NP_001051 A/G V217I minus 7220 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 19p13.3 thromboxane A2 receptor 1089 rs5760 TBXAS1 6916 7 139160106 NM_001061 NP_001052 G/T G390V plus 7230 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1090 rs5760 TBXAS1 6916 7 139160106 NM_001061 NP_001052 G/T G390V plus 7230 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1091 rs5760 TBXAS1 6916 7 139160106 NM_030984 NP_112246 G/T G390V plus 7230 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1092 rs5760 TBXAS1 6916 7 139160106 NM_030984 NP_112246 G/T G390V plus 7230 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1093 rs5762 TBXAS1 6916 7 139168750 NM_001061 NP_001052 C/T R425C plus 7233 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1094 rs5762 TBXAS1 6916 7 139168750 NM_001061 NP_001052 C/T R425C plus 7233 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1095 rs5762 TBXAS1 6916 7 139168750 NM_030984 NP_112246 C/T R425C plus 7233 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 52 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1096 rs5762 TBXAS1 6916 7 139168750 NM_030984 NP_112246 C/T R425C plus 7233 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1097 rs5763 TBXAS1 6916 7 139168829 NM_001061 NP_001052 A/C T451N plus 7236 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 "HapMap,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1098 rs5763 TBXAS1 6916 7 139168829 NM_001061 NP_001052 A/C T451N plus 7236 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.02 52 "HapMap,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1099 rs5763 TBXAS1 6916 7 139168829 NM_001061 NP_001052 A/C T451N plus 7236 1303 SEQUENOM CEPH CEPH (92) 92 1 52 "HapMap,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1100 rs5763 TBXAS1 6916 7 139168829 NM_030984 NP_112246 A/C T451N plus 7236 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 "HapMap,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1101 rs5763 TBXAS1 6916 7 139168829 NM_030984 NP_112246 A/C T451N plus 7236 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.02 52 "HapMap,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1102 rs5763 TBXAS1 6916 7 139168829 NM_030984 NP_112246 A/C T451N plus 7236 1303 SEQUENOM CEPH CEPH (92) 92 1 52 "HapMap,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1103 rs5768 TBXAS1 6916 7 139106380 NM_001061 NP_001052 G/T E161D minus 7241 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 121 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1104 rs5768 TBXAS1 6916 7 139106380 NM_030984 NP_112246 G/T E161D minus 7241 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 121 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1105 rs5769 TBXAS1 6916 7 139110697 NM_001061 NP_001052 A/G K258E plus 7242 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1106 rs5769 TBXAS1 6916 7 139110697 NM_001061 NP_001052 A/G K258E plus 7242 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1107 rs5769 TBXAS1 6916 7 139110697 NM_001061 NP_001052 A/G K258E plus 23766889 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1108 rs5769 TBXAS1 6916 7 139110697 NM_001061 NP_001052 A/G K258E plus 23766889 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1109 rs5769 TBXAS1 6916 7 139110697 NM_001061 NP_001052 A/G K258E plus 23766889 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1110 rs5769 TBXAS1 6916 7 139110697 NM_030984 NP_112246 A/G K258E plus 7242 497 ARAVINDA HYP1 "Harare, Zimbabwe (80)" 80 0.05 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1111 rs5769 TBXAS1 6916 7 139110697 NM_030984 NP_112246 A/G K258E plus 7242 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1112 rs5769 TBXAS1 6916 7 139110697 NM_030984 NP_112246 A/G K258E plus 23766889 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1113 rs5769 TBXAS1 6916 7 139110697 NM_030984 NP_112246 A/G K258E plus 23766889 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1114 rs5769 TBXAS1 6916 7 139110697 NM_030984 NP_112246 A/G K258E plus 23766889 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1115 rs5770 TBXAS1 6916 7 139110706 NM_001061 NP_001052 A/G R261G plus 7243 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 HapMap 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1116 rs5770 TBXAS1 6916 7 139110706 NM_001061 NP_001052 A/G R261G plus 7243 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1117 rs5770 TBXAS1 6916 7 139110706 NM_001061 NP_001052 A/G R261G plus 7243 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1118 rs5770 TBXAS1 6916 7 139110706 NM_030984 NP_112246 A/G R261G plus 7243 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 HapMap 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1119 rs5770 TBXAS1 6916 7 139110706 NM_030984 NP_112246 A/G R261G plus 7243 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1120 rs5770 TBXAS1 6916 7 139110706 NM_030984 NP_112246 A/G R261G plus 7243 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1121 rs5771 TBXAS1 6916 7 139115028 NM_001061 NP_001052 A/C Q317K plus 7244 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1122 rs5771 TBXAS1 6916 7 139115028 NM_001061 NP_001052 A/C Q317K plus 7244 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1123 rs5771 TBXAS1 6916 7 139115028 NM_030984 NP_112246 A/C Q317K plus 7244 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1124 rs5771 TBXAS1 6916 7 139115028 NM_030984 NP_112246 A/C Q317K plus 7244 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1125 rs5774 TRHR 7201 8 110168947 NM_003301 NP_003292 A/C N10K plus 7248 498 ARAVINDA HYP2 "Tecumseh, Michigan (64) and CEPH (4)" 68 0.05 52 HapMap 8q23 thyrotropin-releasing hormone receptor 1126 rs5774 TRHR 7201 8 110168947 NM_003301 NP_003292 A/C N10K plus 7248 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 8q23 thyrotropin-releasing hormone receptor 1127 rs5774 TRHR 7201 8 110168947 NM_003301 NP_003292 A/C N10K plus 7248 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 8q23 thyrotropin-releasing hormone receptor 1128 rs5789 PTGS1 5742 9 122223527 NM_000962 NP_000953 A/C L237M plus 5105630 747 JBIGLER CORIELL_HD100AA CORIELL African-American (100) 96 1 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1129 rs5789 PTGS1 5742 9 122223527 NM_000962 NP_000953 A/C L237M plus 5105630 748 JBIGLER CORIELL_HD100CAU CORIELL Caucasian (100) 94 0.04 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1130 rs5789 PTGS1 5742 9 122223527 NM_000962 NP_000953 A/C L237M plus 5586853 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.02 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1131 rs5789 PTGS1 5742 9 122223527 NM_000962 NP_000953 A/C L237M plus 5586853 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.02 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1132 rs5789 PTGS1 5742 9 122223527 NM_000962 NP_000953 A/C L237M plus 5586853 776 SNP500CANCER AFR1 African / African-American (24) 48 1 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1133 rs5789 PTGS1 5742 9 122223527 NM_000962 NP_000953 A/C L237M plus 5586853 777 SNP500CANCER HISP1 Hispanic (23) 46 0.09 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1134 rs5789 PTGS1 5742 9 122223527 NM_000962 NP_000953 A/C L237M plus 5586853 778 SNP500CANCER PAC1 Pacific Rim (24) 48 1 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1135 rs5789 PTGS1 5742 9 122223527 NM_000962 NP_000953 A/C L237M plus 5586853 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.05 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1136 rs5789 PTGS1 5742 9 122223527 NM_000962 NP_000953 A/C L237M plus 5586853 1303 SEQUENOM CEPH CEPH (92) 92 0.04 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1137 rs5789 PTGS1 5742 9 122223527 NM_000962 NP_000953 A/C L237M plus 14327574 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 4 1 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1138 rs5789 PTGS1 5742 9 122223527 NM_080591 NP_542158 A/C L237M plus 5105630 747 JBIGLER CORIELL_HD100AA CORIELL African-American (100) 96 1 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1139 rs5789 PTGS1 5742 9 122223527 NM_080591 NP_542158 A/C L237M plus 5105630 748 JBIGLER CORIELL_HD100CAU CORIELL Caucasian (100) 94 0.04 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1140 rs5789 PTGS1 5742 9 122223527 NM_080591 NP_542158 A/C L237M plus 5586853 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.02 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1141 rs5789 PTGS1 5742 9 122223527 NM_080591 NP_542158 A/C L237M plus 5586853 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.02 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1142 rs5789 PTGS1 5742 9 122223527 NM_080591 NP_542158 A/C L237M plus 5586853 776 SNP500CANCER AFR1 African / African-American (24) 48 1 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1143 rs5789 PTGS1 5742 9 122223527 NM_080591 NP_542158 A/C L237M plus 5586853 777 SNP500CANCER HISP1 Hispanic (23) 46 0.09 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1144 rs5789 PTGS1 5742 9 122223527 NM_080591 NP_542158 A/C L237M plus 5586853 778 SNP500CANCER PAC1 Pacific Rim (24) 48 1 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1145 rs5789 PTGS1 5742 9 122223527 NM_080591 NP_542158 A/C L237M plus 5586853 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.05 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1146 rs5789 PTGS1 5742 9 122223527 NM_080591 NP_542158 A/C L237M plus 5586853 1303 SEQUENOM CEPH CEPH (92) 92 0.04 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1147 rs5789 PTGS1 5742 9 122223527 NM_080591 NP_542158 A/C L237M plus 14327574 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 4 1 119 "HapMap,freq,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1148 rs5791 PTGS1 5742 9 122228345 NM_000962 NP_000953 A/G K359R plus 5586855 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1149 rs5791 PTGS1 5742 9 122228345 NM_000962 NP_000953 A/G K359R plus 5586855 775 SNP500CANCER CAUC1 Caucasian (31) 62 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1150 rs5791 PTGS1 5742 9 122228345 NM_000962 NP_000953 A/G K359R plus 5586855 776 SNP500CANCER AFR1 African / African-American (24) 48 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1151 rs5791 PTGS1 5742 9 122228345 NM_000962 NP_000953 A/G K359R plus 5586855 777 SNP500CANCER HISP1 Hispanic (23) 46 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1152 rs5791 PTGS1 5742 9 122228345 NM_000962 NP_000953 A/G K359R plus 5586855 778 SNP500CANCER PAC1 Pacific Rim (24) 46 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1153 rs5791 PTGS1 5742 9 122228345 NM_000962 NP_000953 A/G K359R plus 5586855 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1154 rs5791 PTGS1 5742 9 122228345 NM_000962 NP_000953 A/G K359R plus 5586855 1303 SEQUENOM CEPH CEPH (92) 92 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1155 rs5791 PTGS1 5742 9 122228345 NM_080591 NP_542158 A/G K359R plus 5586855 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1156 rs5791 PTGS1 5742 9 122228345 NM_080591 NP_542158 A/G K359R plus 5586855 775 SNP500CANCER CAUC1 Caucasian (31) 62 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1157 rs5791 PTGS1 5742 9 122228345 NM_080591 NP_542158 A/G K359R plus 5586855 776 SNP500CANCER AFR1 African / African-American (24) 48 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1158 rs5791 PTGS1 5742 9 122228345 NM_080591 NP_542158 A/G K359R plus 5586855 777 SNP500CANCER HISP1 Hispanic (23) 46 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1159 rs5791 PTGS1 5742 9 122228345 NM_080591 NP_542158 A/G K359R plus 5586855 778 SNP500CANCER PAC1 Pacific Rim (24) 46 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1160 rs5791 PTGS1 5742 9 122228345 NM_080591 NP_542158 A/G K359R plus 5586855 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1161 rs5791 PTGS1 5742 9 122228345 NM_080591 NP_542158 A/G K359R plus 5586855 1303 SEQUENOM CEPH CEPH (92) 92 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1162 rs5792 PTGS1 5742 9 122232061 NM_000962 NP_000953 A/G I443V plus 5586856 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 1 123 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1163 rs5792 PTGS1 5742 9 122232061 NM_000962 NP_000953 A/G I443V plus 5586856 775 SNP500CANCER CAUC1 Caucasian (31) 60 1 123 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1164 rs5792 PTGS1 5742 9 122232061 NM_000962 NP_000953 A/G I443V plus 5586856 776 SNP500CANCER AFR1 African / African-American (24) 48 1 123 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1165 rs5792 PTGS1 5742 9 122232061 NM_000962 NP_000953 A/G I443V plus 5586856 777 SNP500CANCER HISP1 Hispanic (23) 46 1 123 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1166 rs5792 PTGS1 5742 9 122232061 NM_000962 NP_000953 A/G I443V plus 5586856 778 SNP500CANCER PAC1 Pacific Rim (24) 46 1 123 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1167 rs5792 PTGS1 5742 9 122232061 NM_000962 NP_000953 A/G I443V plus 5586856 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 123 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1168 rs5792 PTGS1 5742 9 122232061 NM_080591 NP_542158 A/G I406V plus 5586856 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 1 123 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1169 rs5792 PTGS1 5742 9 122232061 NM_080591 NP_542158 A/G I406V plus 5586856 775 SNP500CANCER CAUC1 Caucasian (31) 60 1 123 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1170 rs5792 PTGS1 5742 9 122232061 NM_080591 NP_542158 A/G I406V plus 5586856 776 SNP500CANCER AFR1 African / African-American (24) 48 1 123 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1171 rs5792 PTGS1 5742 9 122232061 NM_080591 NP_542158 A/G I406V plus 5586856 777 SNP500CANCER HISP1 Hispanic (23) 46 1 123 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1172 rs5792 PTGS1 5742 9 122232061 NM_080591 NP_542158 A/G I406V plus 5586856 778 SNP500CANCER PAC1 Pacific Rim (24) 46 1 123 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1173 rs5792 PTGS1 5742 9 122232061 NM_080591 NP_542158 A/G I406V plus 5586856 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 123 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1174 rs5793 PTGS1 5742 9 122232133 NM_000962 NP_000953 A/G K467E plus 5586857 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1175 rs5793 PTGS1 5742 9 122232133 NM_000962 NP_000953 A/G K467E plus 5586857 775 SNP500CANCER CAUC1 Caucasian (31) 60 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1176 rs5793 PTGS1 5742 9 122232133 NM_000962 NP_000953 A/G K467E plus 5586857 776 SNP500CANCER AFR1 African / African-American (24) 48 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1177 rs5793 PTGS1 5742 9 122232133 NM_000962 NP_000953 A/G K467E plus 5586857 777 SNP500CANCER HISP1 Hispanic (23) 46 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1178 rs5793 PTGS1 5742 9 122232133 NM_000962 NP_000953 A/G K467E plus 5586857 778 SNP500CANCER PAC1 Pacific Rim (24) 46 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1179 rs5793 PTGS1 5742 9 122232133 NM_000962 NP_000953 A/G K467E plus 5586857 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1180 rs5793 PTGS1 5742 9 122232133 NM_000962 NP_000953 A/G K467E plus 5586857 1303 SEQUENOM CEPH CEPH (92) 92 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1181 rs5793 PTGS1 5742 9 122232133 NM_080591 NP_542158 A/G K430E plus 5586857 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1182 rs5793 PTGS1 5742 9 122232133 NM_080591 NP_542158 A/G K430E plus 5586857 775 SNP500CANCER CAUC1 Caucasian (31) 60 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1183 rs5793 PTGS1 5742 9 122232133 NM_080591 NP_542158 A/G K430E plus 5586857 776 SNP500CANCER AFR1 African / African-American (24) 48 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1184 rs5793 PTGS1 5742 9 122232133 NM_080591 NP_542158 A/G K430E plus 5586857 777 SNP500CANCER HISP1 Hispanic (23) 46 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1185 rs5793 PTGS1 5742 9 122232133 NM_080591 NP_542158 A/G K430E plus 5586857 778 SNP500CANCER PAC1 Pacific Rim (24) 46 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1186 rs5793 PTGS1 5742 9 122232133 NM_080591 NP_542158 A/G K430E plus 5586857 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1187 rs5793 PTGS1 5742 9 122232133 NM_080591 NP_542158 A/G K430E plus 5586857 1303 SEQUENOM CEPH CEPH (92) 92 1 113 "HapMap,cluster" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1188 rs5794 PTGS1 5742 9 122232175 NM_000962 NP_000953 A/G V481I plus 5586858 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.01 113 "by cluster,freq" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1189 rs5794 PTGS1 5742 9 122232175 NM_000962 NP_000953 A/G V481I plus 5586858 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.03 113 "by cluster,freq" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1190 rs5794 PTGS1 5742 9 122232175 NM_000962 NP_000953 A/G V481I plus 5586858 776 SNP500CANCER AFR1 African / African-American (24) 48 1 113 "by cluster,freq" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1191 rs5794 PTGS1 5742 9 122232175 NM_000962 NP_000953 A/G V481I plus 5586858 777 SNP500CANCER HISP1 Hispanic (23) 46 1 113 "by cluster,freq" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1192 rs5794 PTGS1 5742 9 122232175 NM_000962 NP_000953 A/G V481I plus 5586858 778 SNP500CANCER PAC1 Pacific Rim (24) 46 1 113 "by cluster,freq" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1193 rs5794 PTGS1 5742 9 122232175 NM_080591 NP_542158 A/G V444I plus 5586858 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.01 113 "by cluster,freq" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1194 rs5794 PTGS1 5742 9 122232175 NM_080591 NP_542158 A/G V444I plus 5586858 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.03 113 "by cluster,freq" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1195 rs5794 PTGS1 5742 9 122232175 NM_080591 NP_542158 A/G V444I plus 5586858 776 SNP500CANCER AFR1 African / African-American (24) 48 1 113 "by cluster,freq" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1196 rs5794 PTGS1 5742 9 122232175 NM_080591 NP_542158 A/G V444I plus 5586858 777 SNP500CANCER HISP1 Hispanic (23) 46 1 113 "by cluster,freq" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1197 rs5794 PTGS1 5742 9 122232175 NM_080591 NP_542158 A/G V444I plus 5586858 778 SNP500CANCER PAC1 Pacific Rim (24) 46 1 113 "by cluster,freq" 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1198 rs5811 SLC2A1 6513 1 43064460 NM_006516 NP_006507 A/C K255T minus 7286 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 1p35-p31.3 "solute carrier family 2 (facilitated glucose transporter), member 1" 1199 rs5811 SLC2A1 6513 1 43064460 NM_006516 NP_006507 A/C K255T minus 7286 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 1p35-p31.3 "solute carrier family 2 (facilitated glucose transporter), member 1" 1200 rs5856 NOL5A 10528 20 2586882 NM_006392 NP_006383 C/T V576A plus 8464 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.35 121 "by doubleHit,freq,cluster" 20p13 nucleolar protein 5A (56kDa with KKE/D repeat) 1201 rs5856 NOL5A 10528 20 2586882 NM_006392 NP_006383 C/T V576A plus 3208480 738 YUSUKE JBIC-ALLELE Japanese (752) 750 0.24 121 "by doubleHit,freq,cluster" 20p13 nucleolar protein 5A (56kDa with KKE/D repeat) 1202 rs5856 NOL5A 10528 20 2586882 NM_006392 NP_006383 C/T V576A plus 5420265 1303 SEQUENOM CEPH CEPH (92) 92 0.35 121 "by doubleHit,freq,cluster" 20p13 nucleolar protein 5A (56kDa with KKE/D repeat) 1203 rs5880 CETP 1071 16 55572592 NM_000078 NP_000069 C/G A390P plus 7482 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 114 0.1 123 "by cluster,freq" 16q21 "cholesteryl ester transfer protein, plasma" 1204 rs5880 CETP 1071 16 55572592 NM_000078 NP_000069 C/G A390P plus 20419136 1232 PHARMGKB_PARC PA129964588 142 0.01 123 "by cluster,freq" 16q21 "cholesteryl ester transfer protein, plasma" 1205 rs5880 CETP 1071 16 55572592 NM_000078 NP_000069 C/G A390P plus 20419188 1232 PHARMGKB_PARC PA129964588 142 0.01 123 "by cluster,freq" 16q21 "cholesteryl ester transfer protein, plasma" 1206 rs5880 CETP 1071 16 55572592 NM_000078 NP_000069 C/G A390P plus 20419188 1303 SEQUENOM CEPH CEPH (92) 92 0.06 123 "by cluster,freq" 16q21 "cholesteryl ester transfer protein, plasma" 1207 rs5880 CETP 1071 16 55572592 NM_000078 NP_000069 C/G A390P plus 23418077 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.02 123 "by cluster,freq" 16q21 "cholesteryl ester transfer protein, plasma" 1208 rs5880 CETP 1071 16 55572592 NM_000078 NP_000069 C/G A390P plus 23418077 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.02 123 "by cluster,freq" 16q21 "cholesteryl ester transfer protein, plasma" 1209 rs5880 CETP 1071 16 55572592 NM_000078 NP_000069 C/G A390P plus 23418077 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 16q21 "cholesteryl ester transfer protein, plasma" 1210 rs5881 CETP 1071 16 55569513 NM_000078 NP_000069 A/G G331S plus 7483 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 114 0.03 52 HapMap 16q21 "cholesteryl ester transfer protein, plasma" 1211 rs5881 CETP 1071 16 55569513 NM_000078 NP_000069 A/G G331S plus 7483 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 16q21 "cholesteryl ester transfer protein, plasma" 1212 rs5882 CETP 1071 16 55573593 NM_000078 NP_000069 A/G V422I plus 7484 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 114 0.33 123 "by doubleHit,submitter,freq,cluster" 16q21 "cholesteryl ester transfer protein, plasma" 1213 rs5882 CETP 1071 16 55573593 NM_000078 NP_000069 A/G V422I plus 20419079 1232 PHARMGKB_PARC PA129964588 142 0.43 123 "by doubleHit,submitter,freq,cluster" 16q21 "cholesteryl ester transfer protein, plasma" 1214 rs5882 CETP 1071 16 55573593 NM_000078 NP_000069 A/G V422I plus 20419137 1232 PHARMGKB_PARC PA129964588 142 0.43 123 "by doubleHit,submitter,freq,cluster" 16q21 "cholesteryl ester transfer protein, plasma" 1215 rs5882 CETP 1071 16 55573593 NM_000078 NP_000069 A/G V422I plus 23991710 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.31 123 "by doubleHit,submitter,freq,cluster" 16q21 "cholesteryl ester transfer protein, plasma" 1216 rs5882 CETP 1071 16 55573593 NM_000078 NP_000069 A/G V422I plus 23991710 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.37 123 "by doubleHit,submitter,freq,cluster" 16q21 "cholesteryl ester transfer protein, plasma" 1217 rs5882 CETP 1071 16 55573593 NM_000078 NP_000069 A/G V422I plus 23991710 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.46 123 "by doubleHit,submitter,freq,cluster" 16q21 "cholesteryl ester transfer protein, plasma" 1218 rs5887 CETP 1071 16 55575053 NM_000078 NP_000069 A/G V486M plus 7489 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 114 0.03 123 by freq 16q21 "cholesteryl ester transfer protein, plasma" 1219 rs5887 CETP 1071 16 55575053 NM_000078 NP_000069 A/G V486M plus 7489 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 16q21 "cholesteryl ester transfer protein, plasma" 1220 rs5893 F2R 2149 5 76064302 NM_001992 NP_001983 A/G S166G plus 7495 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 52 by freq 5q13 coagulation factor II (thrombin) receptor 1221 rs5893 F2R 2149 5 76064302 NM_001992 NP_001983 A/G S166G plus 7495 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 5q13 coagulation factor II (thrombin) receptor 1222 rs5896 F2 2147 11 46701579 NM_000506 NP_000497 C/T T165M plus 7498 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 126 0.1 123 "HapMap,submitter,freq,cluster" 11p11-q12 coagulation factor II (thrombin) 1223 rs5896 F2 2147 11 46701579 NM_000506 NP_000497 C/T T165M plus 4384736 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.04 123 "HapMap,submitter,freq,cluster" 11p11-q12 coagulation factor II (thrombin) 1224 rs5896 F2 2147 11 46701579 NM_000506 NP_000497 C/T T165M plus 4384736 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.07 123 "HapMap,submitter,freq,cluster" 11p11-q12 coagulation factor II (thrombin) 1225 rs5896 F2 2147 11 46701579 NM_000506 NP_000497 C/T T165M plus 4384736 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.05 123 "HapMap,submitter,freq,cluster" 11p11-q12 coagulation factor II (thrombin) 1226 rs5896 F2 2147 11 46701579 NM_000506 NP_000497 C/T T165M plus 4384736 1303 SEQUENOM CEPH CEPH (92) 92 0.24 123 "HapMap,submitter,freq,cluster" 11p11-q12 coagulation factor II (thrombin) 1227 rs5896 F2 2147 11 46701579 NM_000506 NP_000497 C/T T165M plus 24181221 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.06 123 "HapMap,submitter,freq,cluster" 11p11-q12 coagulation factor II (thrombin) 1228 rs5896 F2 2147 11 46701579 NM_000506 NP_000497 C/T T165M plus 24181221 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "HapMap,submitter,freq,cluster" 11p11-q12 coagulation factor II (thrombin) 1229 rs5896 F2 2147 11 46701579 NM_000506 NP_000497 C/T T165M plus 24181221 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.43 123 "HapMap,submitter,freq,cluster" 11p11-q12 coagulation factor II (thrombin) 1230 rs5897 F2 2147 11 46706147 NM_000506 NP_000497 A/C P386T plus 7499 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 128 0.03 52 HapMap 11p11-q12 coagulation factor II (thrombin) 1231 rs5897 F2 2147 11 46706147 NM_000506 NP_000497 A/C P386T plus 7499 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 11p11-q12 coagulation factor II (thrombin) 1232 rs5897 F2 2147 11 46706147 NM_000506 NP_000497 A/C P386T plus 7499 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 11p11-q12 coagulation factor II (thrombin) 1233 rs5901 F3 2152 1 94710771 NM_001993 NP_001984 C/T R163W minus 7503 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 121 "by cluster,freq" 1p22-p21 "coagulation factor III (thromboplastin, tissue factor)" 1234 rs5901 F3 2152 1 94710771 NM_001993 NP_001984 C/T R163W minus 22887063 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "by cluster,freq" 1p22-p21 "coagulation factor III (thromboplastin, tissue factor)" 1235 rs5904 SERPIND1 3053 22 19465733 NM_000185 NP_000176 C/T T442M plus 7506 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 52 HapMap 22q11.21 "serine (or cysteine) proteinase inhibitor, clade D (heparin cofactor), member 1" 1236 rs5904 SERPIND1 3053 22 19465733 NM_000185 NP_000176 C/T T442M plus 7506 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 22q11.21 "serine (or cysteine) proteinase inhibitor, clade D (heparin cofactor), member 1" 1237 rs5904 SERPIND1 3053 22 19465733 NM_000185 NP_000176 C/T T442M plus 7506 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 22q11.21 "serine (or cysteine) proteinase inhibitor, clade D (heparin cofactor), member 1" 1238 rs5905 SERPIND1 3053 22 19458173 NM_000185 NP_000176 A/G A7T plus 7507 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 123 HapMap 22q11.21 "serine (or cysteine) proteinase inhibitor, clade D (heparin cofactor), member 1" 1239 rs5905 SERPIND1 3053 22 19458173 NM_000185 NP_000176 A/G A7T plus 7507 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 123 HapMap 22q11.21 "serine (or cysteine) proteinase inhibitor, clade D (heparin cofactor), member 1" 1240 rs5907 SERPIND1 3053 22 19458777 NM_000185 NP_000176 A/G R208H plus 7509 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 52 HapMap 22q11.21 "serine (or cysteine) proteinase inhibitor, clade D (heparin cofactor), member 1" 1241 rs5907 SERPIND1 3053 22 19458777 NM_000185 NP_000176 A/G R208H plus 7509 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.01 52 HapMap 22q11.21 "serine (or cysteine) proteinase inhibitor, clade D (heparin cofactor), member 1" 1242 rs5907 SERPIND1 3053 22 19458777 NM_000185 NP_000176 A/G R208H plus 7509 1303 SEQUENOM CEPH CEPH (92) 92 0.06 52 HapMap 22q11.21 "serine (or cysteine) proteinase inhibitor, clade D (heparin cofactor), member 1" 1243 rs5911 ITGA2B 3674 17 39808591 NM_000419 NP_000410 A/C I874S plus 7514 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 112 0.1 121 "HapMap,doubleHit,freq,cluster" 17q21.32 "integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41B)" 1244 rs5911 ITGA2B 3674 17 39808591 NM_000419 NP_000410 A/C I874S plus 2394254 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.3 121 "HapMap,doubleHit,freq,cluster" 17q21.32 "integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41B)" 1245 rs5911 ITGA2B 3674 17 39808591 NM_000419 NP_000410 A/C I874S plus 3232317 738 YUSUKE JBIC-ALLELE Japanese (752) 1498 0.43 121 "HapMap,doubleHit,freq,cluster" 17q21.32 "integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41B)" 1246 rs5914 ITGA2B 3674 17 39807594 NM_000419 NP_000410 A/T Y968N minus 7517 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 112 0.03 52 by freq 17q21.32 "integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41B)" 1247 rs5914 ITGA2B 3674 17 39807594 NM_000419 NP_000410 A/T Y968N minus 7517 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q21.32 "integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41B)" 1248 rs5915 ITGA2B 3674 17 39822249 NM_000419 NP_000410 C/T T40I minus 7518 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 112 0.03 52 HapMap 17q21.32 "integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41B)" 1249 rs5915 ITGA2B 3674 17 39822249 NM_000419 NP_000410 C/T T40I minus 7518 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 17q21.32 "integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41B)" 1250 rs5915 ITGA2B 3674 17 39822249 NM_000419 NP_000410 C/T T40I minus 7518 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 17q21.32 "integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41B)" 1251 rs5917 ITGB3 3690 17 42716952 NM_000212 NP_000203 A/G R169Q plus 7520 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 121 "by cluster,freq" 17q21.32 "integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)" 1252 rs5917 ITGB3 3690 17 42716952 NM_000212 NP_000203 A/G R169Q plus 22887369 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "by cluster,freq" 17q21.32 "integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)" 1253 rs5918 ITGB3 3690 17 42715729 NM_000212 NP_000203 C/T L59P plus 7521 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 98 0.1 52 by freq 17q21.32 "integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)" 1254 rs5921 ITGB3 3690 17 42724600 NM_000212 NP_000203 A/G V453I plus 7526 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 52 by freq 17q21.32 "integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)" 1255 rs5921 ITGB3 3690 17 42724600 NM_000212 NP_000203 A/G V453I plus 7526 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17q21.32 "integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)" 1256 rs5928 LDLR 3949 19 11101240 NM_000527 NP_000518 A/G R814Q plus 7533 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 126 0.03 52 by freq 19p13.3 low density lipoprotein receptor (familial hypercholesterolemia) 1257 rs5928 LDLR 3949 19 11101240 NM_000527 NP_000518 A/G R814Q plus 7533 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 19p13.3 low density lipoprotein receptor (familial hypercholesterolemia) 1258 rs5931 LDLR 3949 19 11061228 NM_000527 NP_000518 C/G G2R plus 7537 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 126 0.03 52 HapMap 19p13.3 low density lipoprotein receptor (familial hypercholesterolemia) 1259 rs5931 LDLR 3949 19 11061228 NM_000527 NP_000518 C/G G2R plus 7537 885 TSC-CSHL HapMap-CEPH-30-trios 118 1 52 HapMap 19p13.3 low density lipoprotein receptor (familial hypercholesterolemia) 1260 rs5931 LDLR 3949 19 11061228 NM_000527 NP_000518 C/G G2R plus 7537 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 19p13.3 low density lipoprotein receptor (familial hypercholesterolemia) 1261 rs5938 PTAFR 5724 1 28161004 NM_000952 NP_000943 A/C A224D minus 7545 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 114 0.03 123 "by cluster,freq" 1p35-p34.3 platelet-activating factor receptor 1262 rs5938 PTAFR 5724 1 28161004 NM_000952 NP_000943 A/C A224D minus 7545 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 1p35-p34.3 platelet-activating factor receptor 1263 rs5938 PTAFR 5724 1 28161004 NM_000952 NP_000943 A/C A224D minus 4924163 738 YUSUKE JBIC-ALLELE Japanese (752) 1500 0.1 123 "by cluster,freq" 1p35-p34.3 platelet-activating factor receptor 1264 rs5938 PTAFR 5724 1 28161004 NM_000952 NP_000943 A/C A224D minus 24141575 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 1p35-p34.3 platelet-activating factor receptor 1265 rs5938 PTAFR 5724 1 28161004 NM_000952 NP_000943 A/C A224D minus 24141575 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by cluster,freq" 1p35-p34.3 platelet-activating factor receptor 1266 rs5938 PTAFR 5724 1 28161004 NM_000952 NP_000943 A/C A224D minus 24141575 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.1 123 "by cluster,freq" 1p35-p34.3 platelet-activating factor receptor 1267 rs5939 PTAFR 5724 1 28160662 NM_000952 NP_000943 A/G N338S minus 7546 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 114 0.03 123 "by submitter,freq,cluster" 1p35-p34.3 platelet-activating factor receptor 1268 rs5939 PTAFR 5724 1 28160662 NM_000952 NP_000943 A/G N338S minus 7546 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by submitter,freq,cluster" 1p35-p34.3 platelet-activating factor receptor 1269 rs5939 PTAFR 5724 1 28160662 NM_000952 NP_000943 A/G N338S minus 23668297 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by submitter,freq,cluster" 1p35-p34.3 platelet-activating factor receptor 1270 rs5939 PTAFR 5724 1 28160662 NM_000952 NP_000943 A/G N338S minus 23668297 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "by submitter,freq,cluster" 1p35-p34.3 platelet-activating factor receptor 1271 rs5939 PTAFR 5724 1 28160662 NM_000952 NP_000943 A/G N338S minus 23668297 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by submitter,freq,cluster" 1p35-p34.3 platelet-activating factor receptor 1272 rs5940 TFPI 7035 2 188157210 NM_006287 NP_006278 A/G V292M minus 7548 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 100 0.03 52 by freq 2q31-q32.1 tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 1273 rs5940 TFPI 7035 2 188157210 NM_006287 NP_006278 A/G V292M minus 7548 1303 SEQUENOM CEPH CEPH (92) 92 0.04 52 by freq 2q31-q32.1 tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 1274 rs5948 ANXA3 306 4 79875673 NM_005139 NP_005130 A/T I219N plus 7557 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 123 "by submitter,freq,cluster" 4q13-q22 annexin A3 1275 rs5948 ANXA3 306 4 79875673 NM_005139 NP_005130 A/T I219N plus 23166719 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by submitter,freq,cluster" 4q13-q22 annexin A3 1276 rs5948 ANXA3 306 4 79875673 NM_005139 NP_005130 A/T I219N plus 23166719 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "by submitter,freq,cluster" 4q13-q22 annexin A3 1277 rs5948 ANXA3 306 4 79875673 NM_005139 NP_005130 A/T I219N plus 23166719 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by submitter,freq,cluster" 4q13-q22 annexin A3 1278 rs5951 ANXA3 306 4 79851553 NM_005139 NP_005130 A/G S19N plus 7560 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 52 by freq 4q13-q22 annexin A3 1279 rs5951 ANXA3 306 4 79851553 NM_005139 NP_005130 A/G S19N plus 7560 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4q13-q22 annexin A3 1280 rs5954 APOD 347 3 529568 NM_001647 NP_001638 C/T S115L minus 7564 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 52 by freq 3q26.2-qter apolipoprotein D 1281 rs5961 F10 2159 13 112831786 NM_000504 NP_000495 C/G Q30H plus 7571 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 123 "by cluster,freq" 13q34 coagulation factor X 1282 rs5961 F10 2159 13 112831786 NM_000504 NP_000495 C/G Q30H plus 7571 1303 SEQUENOM CEPH CEPH (92) 92 0.01 123 "by cluster,freq" 13q34 coagulation factor X 1283 rs5961 F10 2159 13 112831786 NM_000504 NP_000495 C/G Q30H plus 23736939 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 13q34 coagulation factor X 1284 rs5961 F10 2159 13 112831786 NM_000504 NP_000495 C/G Q30H plus 23736939 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "by cluster,freq" 13q34 coagulation factor X 1285 rs5961 F10 2159 13 112831786 NM_000504 NP_000495 C/G Q30H plus 23736939 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 13q34 coagulation factor X 1286 rs5963 F10 2159 13 112825189 NM_000504 NP_000495 A/C L7I plus 7573 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 52 by freq 13q34 coagulation factor X 1287 rs5963 F10 2159 13 112825189 NM_000504 NP_000495 A/C L7I plus 7573 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 13q34 coagulation factor X 1288 rs5967 F11 2160 4 187576676 NM_000128 NP_000119 G/T C339F plus 5609926 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 30 0.07 123 "by cluster,freq" 4q35 coagulation factor XI (plasma thromboplastin antecedent) 1289 rs5967 F11 2160 4 187576676 NM_000128 NP_000119 G/T C339F plus 5609926 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 4q35 coagulation factor XI (plasma thromboplastin antecedent) 1290 rs5967 F11 2160 4 187576676 NM_000128 NP_000119 G/T C339F plus 23275072 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 4q35 coagulation factor XI (plasma thromboplastin antecedent) 1291 rs5967 F11 2160 4 187576676 NM_000128 NP_000119 G/T C339F plus 23275072 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.07 123 "by cluster,freq" 4q35 coagulation factor XI (plasma thromboplastin antecedent) 1292 rs5967 F11 2160 4 187576676 NM_000128 NP_000119 G/T C339F plus 23275072 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 4q35 coagulation factor XI (plasma thromboplastin antecedent) 1293 rs5968 F11 2160 4 187568053 NM_000128 NP_000119 C/T P66L plus 7578 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 52 by freq 4q35 coagulation factor XI (plasma thromboplastin antecedent) 1294 rs5968 F11 2160 4 187568053 NM_000128 NP_000119 C/T P66L plus 7578 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4q35 coagulation factor XI (plasma thromboplastin antecedent) 1295 rs5969 F11 2160 4 187572669 NM_000128 NP_000119 A/G Q244R plus 7579 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 104 0.03 52 by freq 4q35 coagulation factor XI (plasma thromboplastin antecedent) 1296 rs5969 F11 2160 4 187572669 NM_000128 NP_000119 A/G Q244R plus 7579 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4q35 coagulation factor XI (plasma thromboplastin antecedent) 1297 rs5972 F11 2160 4 187576582 NM_000128 NP_000119 A/T I308F plus 7582 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 52 by freq 4q35 coagulation factor XI (plasma thromboplastin antecedent) 1298 rs5972 F11 2160 4 187576582 NM_000128 NP_000119 A/T I308F plus 7582 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4q35 coagulation factor XI (plasma thromboplastin antecedent) 1299 rs5982 F13A1 2162 6 6119865 NM_000129 NP_000120 C/T P565L minus 7592 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.1 123 "by doubleHit,freq,cluster" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1300 rs5982 F13A1 2162 6 6119865 NM_000129 NP_000120 C/T P565L minus 4250318 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 38 0.11 123 "by doubleHit,freq,cluster" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1301 rs5982 F13A1 2162 6 6119865 NM_000129 NP_000120 C/T P565L minus 4250318 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 44 0.27 123 "by doubleHit,freq,cluster" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1302 rs5982 F13A1 2162 6 6119865 NM_000129 NP_000120 C/T P565L minus 4250318 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by doubleHit,freq,cluster" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1303 rs5982 F13A1 2162 6 6119865 NM_000129 NP_000120 C/T P565L minus 24334604 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.29 123 "by doubleHit,freq,cluster" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1304 rs5982 F13A1 2162 6 6119865 NM_000129 NP_000120 C/T P565L minus 24334604 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "by doubleHit,freq,cluster" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1305 rs5982 F13A1 2162 6 6119865 NM_000129 NP_000120 C/T P565L minus 24334604 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.17 123 "by doubleHit,freq,cluster" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1306 rs5983 F13A1 2162 6 6112832 NM_000129 NP_000120 A/T L589Q minus 7593 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 52 by freq 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1307 rs5984 F13A1 2162 6 6119907 NM_000129 NP_000120 C/T T551I minus 7594 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 123 by freq 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1308 rs5984 F13A1 2162 6 6119907 NM_000129 NP_000120 C/T T551I minus 7594 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1309 rs5985 F13A1 2162 6 6263794 NM_000129 NP_000120 G/T V35L minus 7595 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 120 "by doubleHit,freq,cluster" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1310 rs5985 F13A1 2162 6 6263794 NM_000129 NP_000120 G/T V35L minus 4250177 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 44 0.2 120 "by doubleHit,freq,cluster" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1311 rs5985 F13A1 2162 6 6263794 NM_000129 NP_000120 G/T V35L minus 4250177 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 42 0.24 120 "by doubleHit,freq,cluster" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1312 rs5985 F13A1 2162 6 6263794 NM_000129 NP_000120 G/T V35L minus 19693415 1303 SEQUENOM CEPH CEPH (92) 92 0.39 120 "by doubleHit,freq,cluster" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1313 rs5987 F13A1 2162 6 6097139 NM_000129 NP_000120 A/G V651I minus 7597 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.1 121 "by cluster,freq" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1314 rs5987 F13A1 2162 6 6097139 NM_000129 NP_000120 A/G V651I minus 4250337 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 46 0.04 121 "by cluster,freq" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1315 rs5987 F13A1 2162 6 6097139 NM_000129 NP_000120 A/G V651I minus 4250337 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.09 121 "by cluster,freq" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1316 rs5987 F13A1 2162 6 6097139 NM_000129 NP_000120 A/G V651I minus 4250337 1303 SEQUENOM CEPH CEPH (92) 92 0.12 121 "by cluster,freq" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1317 rs5988 F13A1 2162 6 6097136 NM_000129 NP_000120 C/G E652Q minus 7598 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.33 123 "by cluster,freq" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1318 rs5988 F13A1 2162 6 6097136 NM_000129 NP_000120 C/G E652Q minus 4250338 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 46 0.17 123 "by cluster,freq" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1319 rs5988 F13A1 2162 6 6097136 NM_000129 NP_000120 C/G E652Q minus 4250338 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.28 123 "by cluster,freq" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1320 rs5988 F13A1 2162 6 6097136 NM_000129 NP_000120 C/G E652Q minus 4250338 1303 SEQUENOM CEPH CEPH (92) 92 0.2 123 "by cluster,freq" 6p25.3-p24.3 "coagulation factor XIII, A1 polypeptide" 1321 rs6000 F13B 2165 1 193751515 NM_001994 NP_001985 G/T D569E minus 7610 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 52 by freq 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1322 rs6000 F13B 2165 1 193751515 NM_001994 NP_001985 G/T D569E minus 7610 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1323 rs6001 F13B 2165 1 193751594 NM_001994 NP_001985 A/C Y543S minus 7611 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 123 by freq 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1324 rs6001 F13B 2165 1 193751594 NM_001994 NP_001985 A/C Y543S minus 7611 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1325 rs6002 F13B 2165 1 193763764 NM_001994 NP_001985 A/G M49V minus 7612 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 52 by freq 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1326 rs6002 F13B 2165 1 193763764 NM_001994 NP_001985 A/G M49V minus 7612 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1327 rs6003 F13B 2165 1 193762678 NM_001994 NP_001985 A/G R115H minus 7613 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 104 0.33 123 "by doubleHit,submitter,freq,cluster" 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1328 rs6003 F13B 2165 1 193762678 NM_001994 NP_001985 A/G R115H minus 2660016 1303 SEQUENOM CEPH CEPH (92) 92 0.12 123 "by doubleHit,submitter,freq,cluster" 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1329 rs6003 F13B 2165 1 193762678 NM_001994 NP_001985 A/G R115H minus 4387024 700 PSU-ANTH NIGERIA_(BENIN) Nigerian 46 0.28 123 "by doubleHit,submitter,freq,cluster" 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1330 rs6003 F13B 2165 1 193762678 NM_001994 NP_001985 A/G R115H minus 4387024 701 PSU-ANTH NIGERIA_(IBADAN) Nigerian 46 0.28 123 "by doubleHit,submitter,freq,cluster" 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1331 rs6003 F13B 2165 1 193762678 NM_001994 NP_001985 A/G R115H minus 4387024 702 PSU-ANTH SIERRA_LEONE_(MENDE) Sierra Leone 183 0.33 123 "by doubleHit,submitter,freq,cluster" 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1332 rs6003 F13B 2165 1 193762678 NM_001994 NP_001985 A/G R115H minus 4387024 704 PSU-ANTH CENTRAL_AFRICAN_REPUBLIC Central African Republic 52 0.3 123 "by doubleHit,submitter,freq,cluster" 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1333 rs6003 F13B 2165 1 193762678 NM_001994 NP_001985 A/G R115H minus 4387024 705 PSU-ANTH GERMANY German 30 0.02 123 "by doubleHit,submitter,freq,cluster" 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1334 rs6003 F13B 2165 1 193762678 NM_001994 NP_001985 A/G R115H minus 4387024 706 PSU-ANTH SPAIN Spanish 79 0.1 123 "by doubleHit,submitter,freq,cluster" 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1335 rs6003 F13B 2165 1 193762678 NM_001994 NP_001985 A/G R115H minus 4387024 709 PSU-ANTH MAYAN Mexico 96 0.04 123 "by doubleHit,submitter,freq,cluster" 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1336 rs6003 F13B 2165 1 193762678 NM_001994 NP_001985 A/G R115H minus 4387024 710 PSU-ANTH SOUTH-WESTERN_NATIVE_AMERICANS USA 88 0.02 123 "by doubleHit,submitter,freq,cluster" 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1337 rs6003 F13B 2165 1 193762678 NM_001994 NP_001985 A/G R115H minus 23165253 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "by doubleHit,submitter,freq,cluster" 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1338 rs6003 F13B 2165 1 193762678 NM_001994 NP_001985 A/G R115H minus 23165253 1372 PERLEGEN AFD_AFR_PANEL African American (24) 40 0.45 123 "by doubleHit,submitter,freq,cluster" 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1339 rs6003 F13B 2165 1 193762678 NM_001994 NP_001985 A/G R115H minus 23165253 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 1 123 "by doubleHit,submitter,freq,cluster" 1q31-q32.1 "coagulation factor XIII, B polypeptide" 1340 rs6005 F5 2153 1 166242548 NM_000130 NP_000121 C/G H1146Q minus 12674299 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.06 123 "by cluster,freq" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1341 rs6005 F5 2153 1 166242548 NM_000130 NP_000121 C/G H1146Q minus 12674299 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1342 rs6018 F5 2153 1 166243536 NM_000130 NP_000121 G/T N817T plus 7630 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.1 123 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1343 rs6018 F5 2153 1 166243536 NM_000130 NP_000121 G/T N817T plus 3178030 619 WICVAR MITOGPOP6 CORIELL Mixed 158 0.01 123 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1344 rs6018 F5 2153 1 166243536 NM_000130 NP_000121 G/T N817T plus 5169449 1303 SEQUENOM CEPH CEPH (92) 92 0.03 123 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1345 rs6018 F5 2153 1 166243536 NM_000130 NP_000121 G/T N817T plus 12674293 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 44 0.02 123 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1346 rs6018 F5 2153 1 166243536 NM_000130 NP_000121 G/T N817T plus 12674293 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.07 123 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1347 rs6019 F5 2153 1 166273171 NM_000130 NP_000121 C/G D107H minus 7632 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.1 119 "by cluster,freq" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1348 rs6019 F5 2153 1 166273171 NM_000130 NP_000121 C/G D107H minus 12674137 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 46 0.33 119 "by cluster,freq" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1349 rs6019 F5 2153 1 166273171 NM_000130 NP_000121 C/G D107H minus 12674137 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.02 119 "by cluster,freq" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1350 rs6019 F5 2153 1 166273171 NM_000130 NP_000121 C/G D107H minus 12674137 1303 SEQUENOM CEPH CEPH (92) 92 1 119 "by cluster,freq" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1351 rs6020 F5 2153 1 166250770 NM_000130 NP_000121 A/G R513K minus 7633 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 126 0.33 121 "by cluster,freq" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1352 rs6020 F5 2153 1 166250770 NM_000130 NP_000121 A/G R513K minus 12674254 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 46 0.35 121 "by cluster,freq" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1353 rs6020 F5 2153 1 166250770 NM_000130 NP_000121 A/G R513K minus 12674254 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "by cluster,freq" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1354 rs6026 F5 2153 1 166228950 NM_000130 NP_000121 A/G M1820I minus 7640 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 52 by freq 1q23 "coagulation factor V (proaccelerin, labile factor)" 1355 rs6026 F5 2153 1 166228950 NM_000130 NP_000121 A/G M1820I minus 7640 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1q23 "coagulation factor V (proaccelerin, labile factor)" 1356 rs6027 F5 2153 1 166215219 NM_000130 NP_000121 A/G D2222G minus 7641 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 123 by freq 1q23 "coagulation factor V (proaccelerin, labile factor)" 1357 rs6027 F5 2153 1 166215219 NM_000130 NP_000121 A/G D2222G minus 3156385 1303 SEQUENOM CEPH CEPH (92) 92 0.02 123 by freq 1q23 "coagulation factor V (proaccelerin, labile factor)" 1358 rs6027 F5 2153 1 166215219 NM_000130 NP_000121 A/G D2222G minus 24264219 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.05 123 by freq 1q23 "coagulation factor V (proaccelerin, labile factor)" 1359 rs6027 F5 2153 1 166215219 NM_000130 NP_000121 A/G D2222G minus 24264219 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.02 123 by freq 1q23 "coagulation factor V (proaccelerin, labile factor)" 1360 rs6027 F5 2153 1 166215219 NM_000130 NP_000121 A/G D2222G minus 24264219 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.02 123 by freq 1q23 "coagulation factor V (proaccelerin, labile factor)" 1361 rs6030 F5 2153 1 166230633 NM_000130 NP_000121 A/G M1764V minus 7644 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1362 rs6030 F5 2153 1 166230633 NM_000130 NP_000121 A/G M1764V minus 3126849 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.32 123 "HapMap,doubleHit,submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1363 rs6030 F5 2153 1 166230633 NM_000130 NP_000121 A/G M1764V minus 3126849 1303 SEQUENOM CEPH CEPH (92) 92 0.38 123 "HapMap,doubleHit,submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1364 rs6030 F5 2153 1 166230633 NM_000130 NP_000121 A/G M1764V minus 24264378 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.31 123 "HapMap,doubleHit,submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1365 rs6030 F5 2153 1 166230633 NM_000130 NP_000121 A/G M1764V minus 24264378 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.28 123 "HapMap,doubleHit,submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1366 rs6030 F5 2153 1 166230633 NM_000130 NP_000121 A/G M1764V minus 24264378 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.23 123 "HapMap,doubleHit,submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1367 rs6031 F5 2153 1 166243561 NM_000130 NP_000121 C/T P809S minus 7645 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 123 "by cluster,freq" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1368 rs6031 F5 2153 1 166243561 NM_000130 NP_000121 C/T P809S minus 12674292 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 42 0.19 123 "by cluster,freq" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1369 rs6031 F5 2153 1 166243561 NM_000130 NP_000121 C/T P809S minus 12674292 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1370 rs6032 F5 2153 1 166243213 NM_000130 NP_000121 A/G K925E minus 7646 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.1 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1371 rs6032 F5 2153 1 166243213 NM_000130 NP_000121 A/G K925E minus 3195260 738 YUSUKE JBIC-ALLELE Japanese (752) 1476 0.24 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1372 rs6032 F5 2153 1 166243213 NM_000130 NP_000121 A/G K925E minus 12674296 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.27 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1373 rs6032 F5 2153 1 166243213 NM_000130 NP_000121 A/G K925E minus 12674296 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 44 0.23 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1374 rs6032 F5 2153 1 166243213 NM_000130 NP_000121 A/G K925E minus 12674296 1303 SEQUENOM CEPH CEPH (92) 92 0.03 121 "by doubleHit,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1375 rs6033 F5 2153 1 166253511 NM_000130 NP_000121 A/G M413T plus 7647 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 126 0.1 123 "by submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1376 rs6033 F5 2153 1 166253511 NM_000130 NP_000121 A/G M413T plus 62472 771 TSC-CSHL SC_12_A CORIELL Asian (12) 20 0.1 123 "by submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1377 rs6033 F5 2153 1 166253511 NM_000130 NP_000121 A/G M413T plus 62472 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.21 123 "by submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1378 rs6033 F5 2153 1 166253511 NM_000130 NP_000121 A/G M413T plus 62472 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 92 0.08 123 "by submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1379 rs6033 F5 2153 1 166253511 NM_000130 NP_000121 A/G M413T plus 12674236 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 38 0.03 123 "by submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1380 rs6033 F5 2153 1 166253511 NM_000130 NP_000121 A/G M413T plus 12674236 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 44 0.09 123 "by submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1381 rs6033 F5 2153 1 166253511 NM_000130 NP_000121 A/G M413T plus 24264607 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.08 123 "by submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1382 rs6033 F5 2153 1 166253511 NM_000130 NP_000121 A/G M413T plus 24264607 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.02 123 "by submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1383 rs6033 F5 2153 1 166253511 NM_000130 NP_000121 A/G M413T plus 24264607 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.02 123 "by submitter,freq,cluster" 1q23 "coagulation factor V (proaccelerin, labile factor)" 1384 rs6034 F5 2153 1 166230678 NM_000130 NP_000121 C/G L1749V minus 7648 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 52 by freq 1q23 "coagulation factor V (proaccelerin, labile factor)" 1385 rs6034 F5 2153 1 166230678 NM_000130 NP_000121 C/G L1749V minus 7648 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1q23 "coagulation factor V (proaccelerin, labile factor)" 1386 rs6045 F7 2155 13 112820806 NM_000131 NP_000122 A/T V295D plus 7659 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 104 0.03 123 by freq 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1387 rs6045 F7 2155 13 112820806 NM_019616 NP_062562 A/T V273D plus 7659 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 104 0.03 123 by freq 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1388 rs6046 F7 2155 13 112821160 NM_000131 NP_000122 C/T R413Q minus 7660 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 104 0.03 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1389 rs6046 F7 2155 13 112821160 NM_000131 NP_000122 C/T R413Q minus 703548 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.08 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1390 rs6046 F7 2155 13 112821160 NM_000131 NP_000122 C/T R413Q minus 703548 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.07 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1391 rs6046 F7 2155 13 112821160 NM_000131 NP_000122 C/T R413Q minus 703548 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 186 0.12 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1392 rs6046 F7 2155 13 112821160 NM_000131 NP_000122 C/T R413Q minus 4328443 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.13 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1393 rs6046 F7 2155 13 112821160 NM_000131 NP_000122 C/T R413Q minus 4328443 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.04 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1394 rs6046 F7 2155 13 112821160 NM_000131 NP_000122 C/T R413Q minus 4328443 1303 SEQUENOM CEPH CEPH (92) 92 0.08 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1395 rs6046 F7 2155 13 112821160 NM_000131 NP_000122 C/T R413Q minus 14866746 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.13 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1396 rs6046 F7 2155 13 112821160 NM_000131 NP_000122 C/T R413Q minus 14866746 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 4 1 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1397 rs6046 F7 2155 13 112821160 NM_000131 NP_000122 C/T R413Q minus 23736857 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.07 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1398 rs6046 F7 2155 13 112821160 NM_000131 NP_000122 C/T R413Q minus 23736857 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1399 rs6046 F7 2155 13 112821160 NM_000131 NP_000122 C/T R413Q minus 23736857 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.07 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1400 rs6046 F7 2155 13 112821160 NM_019616 NP_062562 C/T R391Q minus 7660 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 104 0.03 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1401 rs6046 F7 2155 13 112821160 NM_019616 NP_062562 C/T R391Q minus 703548 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.08 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1402 rs6046 F7 2155 13 112821160 NM_019616 NP_062562 C/T R391Q minus 703548 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.07 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1403 rs6046 F7 2155 13 112821160 NM_019616 NP_062562 C/T R391Q minus 703548 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 186 0.12 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1404 rs6046 F7 2155 13 112821160 NM_019616 NP_062562 C/T R391Q minus 4328443 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.13 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1405 rs6046 F7 2155 13 112821160 NM_019616 NP_062562 C/T R391Q minus 4328443 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.04 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1406 rs6046 F7 2155 13 112821160 NM_019616 NP_062562 C/T R391Q minus 4328443 1303 SEQUENOM CEPH CEPH (92) 92 0.08 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1407 rs6046 F7 2155 13 112821160 NM_019616 NP_062562 C/T R391Q minus 14866746 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.13 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1408 rs6046 F7 2155 13 112821160 NM_019616 NP_062562 C/T R391Q minus 14866746 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 4 1 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1409 rs6046 F7 2155 13 112821160 NM_019616 NP_062562 C/T R391Q minus 23736857 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.07 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1410 rs6046 F7 2155 13 112821160 NM_019616 NP_062562 C/T R391Q minus 23736857 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1411 rs6046 F7 2155 13 112821160 NM_019616 NP_062562 C/T R391Q minus 23736857 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.07 123 "by cluster,freq" 13q34 coagulation factor VII (serum prothrombin conversion accelerator) 1412 rs6050 FGA 2243 4 155865195 NM_000508 NP_000499 A/G T331A minus 7664 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.33 123 "by doubleHit,freq,cluster" 4q28 "fibrinogen, A alpha polypeptide" 1413 rs6050 FGA 2243 4 155865195 NM_000508 NP_000499 A/G T331A minus 2982181 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 21 0.5 123 "by doubleHit,freq,cluster" 4q28 "fibrinogen, A alpha polypeptide" 1414 rs6050 FGA 2243 4 155865195 NM_000508 NP_000499 A/G T331A minus 2982181 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 40 0.2 123 "by doubleHit,freq,cluster" 4q28 "fibrinogen, A alpha polypeptide" 1415 rs6050 FGA 2243 4 155865195 NM_000508 NP_000499 A/G T331A minus 17810442 1303 SEQUENOM CEPH CEPH (92) 92 0.22 123 "by doubleHit,freq,cluster" 4q28 "fibrinogen, A alpha polypeptide" 1416 rs6050 FGA 2243 4 155865195 NM_000508 NP_000499 A/G T331A minus 24154884 1371 PERLEGEN AFD_EUR_PANEL European American (24) 42 0.24 123 "by doubleHit,freq,cluster" 4q28 "fibrinogen, A alpha polypeptide" 1417 rs6050 FGA 2243 4 155865195 NM_000508 NP_000499 A/G T331A minus 24154884 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.45 123 "by doubleHit,freq,cluster" 4q28 "fibrinogen, A alpha polypeptide" 1418 rs6050 FGA 2243 4 155865195 NM_000508 NP_000499 A/G T331A minus 24154884 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.48 123 "by doubleHit,freq,cluster" 4q28 "fibrinogen, A alpha polypeptide" 1419 rs6050 FGA 2243 4 155865195 NM_021871 NP_068657 A/G T331A minus 7664 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.33 123 "by doubleHit,freq,cluster" 4q28 "fibrinogen, A alpha polypeptide" 1420 rs6050 FGA 2243 4 155865195 NM_021871 NP_068657 A/G T331A minus 2982181 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 21 0.5 123 "by doubleHit,freq,cluster" 4q28 "fibrinogen, A alpha polypeptide" 1421 rs6050 FGA 2243 4 155865195 NM_021871 NP_068657 A/G T331A minus 2982181 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 40 0.2 123 "by doubleHit,freq,cluster" 4q28 "fibrinogen, A alpha polypeptide" 1422 rs6050 FGA 2243 4 155865195 NM_021871 NP_068657 A/G T331A minus 17810442 1303 SEQUENOM CEPH CEPH (92) 92 0.22 123 "by doubleHit,freq,cluster" 4q28 "fibrinogen, A alpha polypeptide" 1423 rs6050 FGA 2243 4 155865195 NM_021871 NP_068657 A/G T331A minus 24154884 1371 PERLEGEN AFD_EUR_PANEL European American (24) 42 0.24 123 "by doubleHit,freq,cluster" 4q28 "fibrinogen, A alpha polypeptide" 1424 rs6050 FGA 2243 4 155865195 NM_021871 NP_068657 A/G T331A minus 24154884 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.45 123 "by doubleHit,freq,cluster" 4q28 "fibrinogen, A alpha polypeptide" 1425 rs6050 FGA 2243 4 155865195 NM_021871 NP_068657 A/G T331A minus 24154884 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.48 123 "by doubleHit,freq,cluster" 4q28 "fibrinogen, A alpha polypeptide" 1426 rs6052 FGA 2243 4 155864850 NM_000508 NP_000499 A/G K446E minus 7666 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 52 by freq 4q28 "fibrinogen, A alpha polypeptide" 1427 rs6052 FGA 2243 4 155864850 NM_000508 NP_000499 A/G K446E minus 7666 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4q28 "fibrinogen, A alpha polypeptide" 1428 rs6052 FGA 2243 4 155864850 NM_021871 NP_068657 A/G K446E minus 7666 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 108 0.03 52 by freq 4q28 "fibrinogen, A alpha polypeptide" 1429 rs6052 FGA 2243 4 155864850 NM_021871 NP_068657 A/G K446E minus 7666 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4q28 "fibrinogen, A alpha polypeptide" 1430 rs6065 GP1BA 2811 17 4777161 NM_000173 NP_000164 C/T T161M plus 3199559 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.17 121 "by cluster,freq" 17pter-p12 "glycoprotein Ib (platelet), alpha polypeptide" 1431 rs6065 GP1BA 2811 17 4777161 NM_000173 NP_000164 C/T T161M plus 3199559 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.02 121 "by cluster,freq" 17pter-p12 "glycoprotein Ib (platelet), alpha polypeptide" 1432 rs6065 GP1BA 2811 17 4777161 NM_000173 NP_000164 C/T T161M plus 3199559 1303 SEQUENOM CEPH CEPH (92) 92 0.05 121 "by cluster,freq" 17pter-p12 "glycoprotein Ib (platelet), alpha polypeptide" 1433 rs6068 GP1BA 2811 17 4776894 NM_000173 NP_000164 A/G R72H plus 7685 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 98 0.03 52 by freq 17pter-p12 "glycoprotein Ib (platelet), alpha polypeptide" 1434 rs6068 GP1BA 2811 17 4776894 NM_000173 NP_000164 A/G R72H plus 7685 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 17pter-p12 "glycoprotein Ib (platelet), alpha polypeptide" 1435 rs6078 LIPC 3990 15 56621285 NM_000236 NP_000227 A/G V95M plus 7695 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 102 0.1 123 "HapMap,freq" 15q21-q23 "lipase, hepatic" 1436 rs6078 LIPC 3990 15 56621285 NM_000236 NP_000227 A/G V95M plus 7695 885 TSC-CSHL HapMap-CEPH-30-trios 116 0.03 123 "HapMap,freq" 15q21-q23 "lipase, hepatic" 1437 rs6078 LIPC 3990 15 56621285 NM_000236 NP_000227 A/G V95M plus 24224736 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "HapMap,freq" 15q21-q23 "lipase, hepatic" 1438 rs6078 LIPC 3990 15 56621285 NM_000236 NP_000227 A/G V95M plus 24224736 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "HapMap,freq" 15q21-q23 "lipase, hepatic" 1439 rs6078 LIPC 3990 15 56621285 NM_000236 NP_000227 A/G V95M plus 24224736 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "HapMap,freq" 15q21-q23 "lipase, hepatic" 1440 rs6079 LIPC 3990 15 56643145 NM_000236 NP_000227 A/G S440N plus 7696 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 52 HapMap 15q21-q23 "lipase, hepatic" 1441 rs6079 LIPC 3990 15 56643145 NM_000236 NP_000227 A/G S440N plus 7696 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 15q21-q23 "lipase, hepatic" 1442 rs6079 LIPC 3990 15 56643145 NM_000236 NP_000227 A/G S440N plus 7696 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 15q21-q23 "lipase, hepatic" 1443 rs6083 LIPC 3990 15 56625302 NM_000236 NP_000227 A/G N215S plus 7700 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 104 0.33 123 "HapMap,doubleHit,freq,cluster" 15q21-q23 "lipase, hepatic" 1444 rs6083 LIPC 3990 15 56625302 NM_000236 NP_000227 A/G N215S plus 6587908 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.42 123 "HapMap,doubleHit,freq,cluster" 15q21-q23 "lipase, hepatic" 1445 rs6083 LIPC 3990 15 56625302 NM_000236 NP_000227 A/G N215S plus 6587908 1303 SEQUENOM CEPH CEPH (92) 92 0.36 123 "HapMap,doubleHit,freq,cluster" 15q21-q23 "lipase, hepatic" 1446 rs6083 LIPC 3990 15 56625302 NM_000236 NP_000227 A/G N215S plus 12587368 928 IBARROSO ELY UK (Ely region of East Anglia) 921 0.38 123 "HapMap,doubleHit,freq,cluster" 15q21-q23 "lipase, hepatic" 1447 rs6083 LIPC 3990 15 56625302 NM_000236 NP_000227 A/G N215S plus 24718495 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.41 123 "HapMap,doubleHit,freq,cluster" 15q21-q23 "lipase, hepatic" 1448 rs6083 LIPC 3990 15 56625302 NM_000236 NP_000227 A/G N215S plus 24718495 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.37 123 "HapMap,doubleHit,freq,cluster" 15q21-q23 "lipase, hepatic" 1449 rs6083 LIPC 3990 15 56625302 NM_000236 NP_000227 A/G N215S plus 24718495 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.21 123 "HapMap,doubleHit,freq,cluster" 15q21-q23 "lipase, hepatic" 1450 rs6087 MPL 4352 1 43472956 NM_005373 NP_005364 C/T A58V plus 7704 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 104 0.03 52 by freq 1p34 myeloproliferative leukemia virus oncogene 1451 rs6087 MPL 4352 1 43472956 NM_005373 NP_005364 C/T A58V plus 7704 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p34 myeloproliferative leukemia virus oncogene 1452 rs6088 MPL 4352 1 43474145 NM_005373 NP_005364 A/G E168K plus 7705 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 102 0.03 52 by freq 1p34 myeloproliferative leukemia virus oncogene 1453 rs6088 MPL 4352 1 43474145 NM_005373 NP_005364 A/G E168K plus 7705 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p34 myeloproliferative leukemia virus oncogene 1454 rs6090 SERPINE1 5054 7 100365158 NM_000602 NP_000593 A/G V17I plus 7707 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 123 "by submitter,freq,cluster" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1455 rs6090 SERPINE1 5054 7 100365158 NM_000602 NP_000593 A/G V17I plus 7707 638 TSC-CSHL TSC_42_AA TSC African American (42) 83 0.17 123 "by submitter,freq,cluster" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1456 rs6090 SERPINE1 5054 7 100365158 NM_000602 NP_000593 A/G V17I plus 7707 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 123 "by submitter,freq,cluster" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1457 rs6090 SERPINE1 5054 7 100365158 NM_000602 NP_000593 A/G V17I plus 7707 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 123 "by submitter,freq,cluster" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1458 rs6090 SERPINE1 5054 7 100365158 NM_000602 NP_000593 A/G V17I plus 3172223 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.1 123 "by submitter,freq,cluster" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1459 rs6090 SERPINE1 5054 7 100365158 NM_000602 NP_000593 A/G V17I plus 3172223 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 4 1 123 "by submitter,freq,cluster" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1460 rs6090 SERPINE1 5054 7 100365158 NM_000602 NP_000593 A/G V17I plus 3172223 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by submitter,freq,cluster" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1461 rs6090 SERPINE1 5054 7 100365158 NM_000602 NP_000593 A/G V17I plus 23411103 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.02 123 "by submitter,freq,cluster" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1462 rs6090 SERPINE1 5054 7 100365158 NM_000602 NP_000593 A/G V17I plus 23411103 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "by submitter,freq,cluster" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1463 rs6090 SERPINE1 5054 7 100365158 NM_000602 NP_000593 A/G V17I plus 23411103 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.04 123 "by submitter,freq,cluster" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1464 rs6092 SERPINE1 5054 7 100365152 NM_000602 NP_000593 A/G A15T plus 7709 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.1 123 "by cluster,freq" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1465 rs6092 SERPINE1 5054 7 100365152 NM_000602 NP_000593 A/G A15T plus 7709 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 123 "by cluster,freq" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1466 rs6092 SERPINE1 5054 7 100365152 NM_000602 NP_000593 A/G A15T plus 7709 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 123 "by cluster,freq" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1467 rs6092 SERPINE1 5054 7 100365152 NM_000602 NP_000593 A/G A15T plus 7709 640 TSC-CSHL TSC_42_A TSC Asian (42) 83 0.14 123 "by cluster,freq" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1468 rs6092 SERPINE1 5054 7 100365152 NM_000602 NP_000593 A/G A15T plus 3172290 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 4 0.25 123 "by cluster,freq" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1469 rs6092 SERPINE1 5054 7 100365152 NM_000602 NP_000593 A/G A15T plus 3172290 1303 SEQUENOM CEPH CEPH (92) 92 0.16 123 "by cluster,freq" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1470 rs6092 SERPINE1 5054 7 100365152 NM_000602 NP_000593 A/G A15T plus 23987545 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.1 123 "by cluster,freq" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1471 rs6092 SERPINE1 5054 7 100365152 NM_000602 NP_000593 A/G A15T plus 23987545 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by cluster,freq" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1472 rs6092 SERPINE1 5054 7 100365152 NM_000602 NP_000593 A/G A15T plus 23987545 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 42 0.12 123 "by cluster,freq" 7q21.3-q22 "serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" 1473 rs6098 SERPINB2 5055 18 59715374 NM_002575 NP_002566 A/G N120D plus 7715 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 104 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1474 rs6098 SERPINB2 5055 18 59715374 NM_002575 NP_002566 A/G N120D plus 3094604 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.23 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1475 rs6098 SERPINB2 5055 18 59715374 NM_002575 NP_002566 A/G N120D plus 3094604 1303 SEQUENOM CEPH CEPH (92) 92 0.16 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1476 rs6098 SERPINB2 5055 18 59715374 NM_002575 NP_002566 A/G N120D plus 23531315 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.21 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1477 rs6098 SERPINB2 5055 18 59715374 NM_002575 NP_002566 A/G N120D plus 23531315 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1478 rs6098 SERPINB2 5055 18 59715374 NM_002575 NP_002566 A/G N120D plus 23531315 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1479 rs6100 SERPINB2 5055 18 59720625 NM_002575 NP_002566 A/G R229H plus 7717 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 96 0.03 52 HapMap 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1480 rs6100 SERPINB2 5055 18 59720625 NM_002575 NP_002566 A/G R229H plus 7717 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1481 rs6103 SERPINB2 5055 18 59721483 NM_002575 NP_002566 C/G N404K plus 7720 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1482 rs6103 SERPINB2 5055 18 59721483 NM_002575 NP_002566 C/G N404K plus 7720 901 AFFY AfAm 12 0.25 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1483 rs6103 SERPINB2 5055 18 59721483 NM_002575 NP_002566 C/G N404K plus 7720 902 AFFY Caucasian 24 0.17 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1484 rs6103 SERPINB2 5055 18 59721483 NM_002575 NP_002566 C/G N404K plus 7720 903 AFFY Asian 12 0.42 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1485 rs6103 SERPINB2 5055 18 59721483 NM_002575 NP_002566 C/G N404K plus 7720 904 AFFY CEPH 12 0.17 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1486 rs6103 SERPINB2 5055 18 59721483 NM_002575 NP_002566 C/G N404K plus 7720 905 AFFY PDpanel 48 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1487 rs6103 SERPINB2 5055 18 59721483 NM_002575 NP_002566 C/G N404K plus 14303771 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.23 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1488 rs6103 SERPINB2 5055 18 59721483 NM_002575 NP_002566 C/G N404K plus 14303771 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1489 rs6103 SERPINB2 5055 18 59721483 NM_002575 NP_002566 C/G N404K plus 23531504 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.21 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1490 rs6103 SERPINB2 5055 18 59721483 NM_002575 NP_002566 C/G N404K plus 23531504 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1491 rs6103 SERPINB2 5055 18 59721483 NM_002575 NP_002566 C/G N404K plus 23531504 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1492 rs6104 SERPINB2 5055 18 59721509 NM_002575 NP_002566 C/G S413C plus 7721 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.33 123 "by doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1493 rs6104 SERPINB2 5055 18 59721509 NM_002575 NP_002566 C/G S413C plus 14303772 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1494 rs6104 SERPINB2 5055 18 59721509 NM_002575 NP_002566 C/G S413C plus 23531513 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.21 123 "by doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1495 rs6104 SERPINB2 5055 18 59721509 NM_002575 NP_002566 C/G S413C plus 23531513 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "by doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1496 rs6104 SERPINB2 5055 18 59721509 NM_002575 NP_002566 C/G S413C plus 23531513 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "by doubleHit,submitter,freq,cluster" 18q21.3 "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2" 1497 rs6114 SERPINA5 5104 14 94126160 NM_000624 NP_000615 C/G G217R plus 7731 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 123 "by submitter,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1498 rs6114 SERPINA5 5104 14 94126160 NM_000624 NP_000615 C/G G217R plus 2982134 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 46 0.07 123 "by submitter,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1499 rs6114 SERPINA5 5104 14 94126160 NM_000624 NP_000615 C/G G217R plus 14388996 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by submitter,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1500 rs6114 SERPINA5 5104 14 94126160 NM_000624 NP_000615 C/G G217R plus 23648731 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by submitter,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1501 rs6114 SERPINA5 5104 14 94126160 NM_000624 NP_000615 C/G G217R plus 23648731 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by submitter,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1502 rs6114 SERPINA5 5104 14 94126160 NM_000624 NP_000615 C/G G217R plus 23648731 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by submitter,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1503 rs6115 SERPINA5 5104 14 94123643 NM_000624 NP_000615 A/G S64N plus 7732 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 102 0.1 120 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1504 rs6115 SERPINA5 5104 14 94123643 NM_000624 NP_000615 A/G S64N plus 1382288 1303 SEQUENOM CEPH CEPH (92) 92 0.23 120 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1505 rs6115 SERPINA5 5104 14 94123643 NM_000624 NP_000615 A/G S64N plus 2982120 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 46 0.11 120 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1506 rs6115 SERPINA5 5104 14 94123643 NM_000624 NP_000615 A/G S64N plus 2982120 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.37 120 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1507 rs6118 SERPINA5 5104 14 94123616 NM_000624 NP_000615 C/T A55V plus 7735 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 102 0.1 123 "by cluster,freq" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1508 rs6118 SERPINA5 5104 14 94123616 NM_000624 NP_000615 C/T A55V plus 1372189 1303 SEQUENOM CEPH CEPH (92) 92 0.04 123 "by cluster,freq" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1509 rs6118 SERPINA5 5104 14 94123616 NM_000624 NP_000615 C/T A55V plus 2982119 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 46 0.43 123 "by cluster,freq" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1510 rs6118 SERPINA5 5104 14 94123616 NM_000624 NP_000615 C/T A55V plus 2982119 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.09 123 "by cluster,freq" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1511 rs6118 SERPINA5 5104 14 94123616 NM_000624 NP_000615 C/T A55V plus 23648710 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.08 123 "by cluster,freq" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1512 rs6118 SERPINA5 5104 14 94123616 NM_000624 NP_000615 C/T A55V plus 23648710 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.39 123 "by cluster,freq" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1513 rs6118 SERPINA5 5104 14 94123616 NM_000624 NP_000615 C/T A55V plus 23648710 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.17 123 "by cluster,freq" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1514 rs6119 SERPINA5 5104 14 94123765 NM_000624 NP_000615 A/G K105E plus 7736 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 102 0.03 123 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1515 rs6119 SERPINA5 5104 14 94123765 NM_000624 NP_000615 A/G K105E plus 2982123 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 38 0.47 123 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1516 rs6119 SERPINA5 5104 14 94123765 NM_000624 NP_000615 A/G K105E plus 2982123 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 44 0.09 123 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1517 rs6119 SERPINA5 5104 14 94123765 NM_000624 NP_000615 A/G K105E plus 12279178 1303 SEQUENOM CEPH CEPH (92) 92 0.26 123 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1518 rs6119 SERPINA5 5104 14 94123765 NM_000624 NP_000615 A/G K105E plus 23648718 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.09 123 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1519 rs6119 SERPINA5 5104 14 94123765 NM_000624 NP_000615 A/G K105E plus 23648718 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.39 123 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1520 rs6119 SERPINA5 5104 14 94123765 NM_000624 NP_000615 A/G K105E plus 23648718 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.17 123 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1521 rs6120 SERPINA5 5104 14 94123813 NM_000624 NP_000615 C/G P121A plus 7737 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 102 0.03 52 by freq 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1522 rs6120 SERPINA5 5104 14 94123813 NM_000624 NP_000615 C/G P121A plus 7737 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5" 1523 rs6125 SELP 6403 1 166313975 NM_003005 NP_002996 A/G V209M minus 5111836 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 42 0.05 108 "by cluster,freq" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1524 rs6125 SELP 6403 1 166313975 NM_003005 NP_002996 A/G V209M minus 5111836 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.02 108 "by cluster,freq" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1525 rs6125 SELP 6403 1 166313975 NM_003005 NP_002996 A/G V209M minus 5111836 1303 SEQUENOM CEPH CEPH (92) 92 1 108 "by cluster,freq" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1526 rs6127 SELP 6403 1 166297971 NM_003005 NP_002996 A/G D603N minus 7744 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 102 0.33 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1527 rs6127 SELP 6403 1 166297971 NM_003005 NP_002996 A/G D603N minus 5111936 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 46 0.24 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1528 rs6127 SELP 6403 1 166297971 NM_003005 NP_002996 A/G D603N minus 5111936 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 44 0.45 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1529 rs6127 SELP 6403 1 166297971 NM_003005 NP_002996 A/G D603N minus 24796122 1303 SEQUENOM CEPH CEPH (92) 184 0.31 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1530 rs6127 SELP 6403 1 166297971 NM_003005 NP_002996 A/G D603N minus 24811825 1303 SEQUENOM CEPH CEPH (92) 184 0.47 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1531 rs6127 SELP 6403 1 166297971 NM_003005 NP_002996 A/G D603N minus 24811973 1303 SEQUENOM CEPH CEPH (92) 184 0.23 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1532 rs6130 SELP 6403 1 166307865 NM_003005 NP_002996 C/T S500F minus 7747 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 52 by freq 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1533 rs6130 SELP 6403 1 166307865 NM_003005 NP_002996 C/T S500F minus 7747 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1534 rs6131 SELP 6403 1 166312543 NM_003005 NP_002996 A/G S331N minus 7748 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.1 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1535 rs6131 SELP 6403 1 166312543 NM_003005 NP_002996 A/G S331N minus 5111846 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.25 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1536 rs6131 SELP 6403 1 166312543 NM_003005 NP_002996 A/G S331N minus 5111846 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.13 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1537 rs6131 SELP 6403 1 166312543 NM_003005 NP_002996 A/G S331N minus 5111846 1303 SEQUENOM CEPH CEPH (92) 92 0.16 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1538 rs6131 SELP 6403 1 166312543 NM_003005 NP_002996 A/G S331N minus 23188337 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.13 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1539 rs6131 SELP 6403 1 166312543 NM_003005 NP_002996 A/G S331N minus 23188337 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.24 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1540 rs6131 SELP 6403 1 166312543 NM_003005 NP_002996 A/G S331N minus 23188337 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.19 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1541 rs6133 SELP 6403 1 166297004 NM_003005 NP_002996 G/T V640L minus 7750 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 104 0.33 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1542 rs6133 SELP 6403 1 166297004 NM_003005 NP_002996 G/T V640L minus 5111948 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.46 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1543 rs6133 SELP 6403 1 166297004 NM_003005 NP_002996 G/T V640L minus 5111948 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.04 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1544 rs6133 SELP 6403 1 166297004 NM_003005 NP_002996 G/T V640L minus 5111948 1303 SEQUENOM CEPH CEPH (92) 92 0.09 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1545 rs6133 SELP 6403 1 166297004 NM_003005 NP_002996 G/T V640L minus 23161353 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1546 rs6133 SELP 6403 1 166297004 NM_003005 NP_002996 G/T V640L minus 23161353 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.46 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1547 rs6133 SELP 6403 1 166297004 NM_003005 NP_002996 G/T V640L minus 23161353 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by doubleHit,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1548 rs6134 SELP 6403 1 166312442 NM_003005 NP_002996 A/G M365V minus 7751 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 52 by freq 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1549 rs6134 SELP 6403 1 166312442 NM_003005 NP_002996 A/G M365V minus 7751 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1550 rs6136 SELP 6403 1 166295609 NM_003005 NP_002996 A/C T756P minus 7753 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.1 123 "by submitter,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1551 rs6136 SELP 6403 1 166295609 NM_003005 NP_002996 A/C T756P minus 5111969 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 44 0.02 123 "by submitter,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1552 rs6136 SELP 6403 1 166295609 NM_003005 NP_002996 A/C T756P minus 5111969 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 44 0.14 123 "by submitter,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1553 rs6136 SELP 6403 1 166295609 NM_003005 NP_002996 A/C T756P minus 5111969 1303 SEQUENOM CEPH CEPH (92) 92 0.06 123 "by submitter,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1554 rs6136 SELP 6403 1 166295609 NM_003005 NP_002996 A/C T756P minus 24265196 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.13 123 "by submitter,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1555 rs6136 SELP 6403 1 166295609 NM_003005 NP_002996 A/C T756P minus 24265196 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "by submitter,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1556 rs6136 SELP 6403 1 166295609 NM_003005 NP_002996 A/C T756P minus 24265196 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 1 123 "by submitter,freq,cluster" 1q22-q25 "selectin P (granule membrane protein 140kDa, antigen CD62)" 1557 rs6140 TBXAS1 6916 7 139115074 NM_001061 NP_001052 C/T I332T plus 7760 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 102 0.03 123 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1558 rs6140 TBXAS1 6916 7 139115074 NM_001061 NP_001052 C/T I332T plus 7760 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1559 rs6140 TBXAS1 6916 7 139115074 NM_030984 NP_112246 C/T I332T plus 7760 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 102 0.03 123 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1560 rs6140 TBXAS1 6916 7 139115074 NM_030984 NP_112246 C/T I332T plus 7760 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 7q34-q35 "thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)" 1561 rs6149 VLDLR 7436 9 2625545 NM_003383 NP_003374 A/G V59I plus 7770 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 106 0.03 123 "HapMap,freq,cluster" 9p24 very low density lipoprotein receptor 1562 rs6149 VLDLR 7436 9 2625545 NM_003383 NP_003374 A/G V59I plus 7770 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.01 123 "HapMap,freq,cluster" 9p24 very low density lipoprotein receptor 1563 rs6149 VLDLR 7436 9 2625545 NM_003383 NP_003374 A/G V59I plus 15698506 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "HapMap,freq,cluster" 9p24 very low density lipoprotein receptor 1564 rs6149 VLDLR 7436 9 2625545 NM_003383 NP_003374 A/G V59I plus 23765125 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "HapMap,freq,cluster" 9p24 very low density lipoprotein receptor 1565 rs6149 VLDLR 7436 9 2625545 NM_003383 NP_003374 A/G V59I plus 23765125 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.22 123 "HapMap,freq,cluster" 9p24 very low density lipoprotein receptor 1566 rs6149 VLDLR 7436 9 2625545 NM_003383 NP_003374 A/G V59I plus 23765125 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,freq,cluster" 9p24 very low density lipoprotein receptor 1567 rs6165 FSHR 2492 2 49102692 NM_000145 NP_000136 A/G A307T minus 7786 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 82 0.33 123 "by cluster,freq" 2p21-p16 follicle stimulating hormone receptor 1568 rs6165 FSHR 2492 2 49102692 NM_000145 NP_000136 A/G A307T minus 14308073 1303 SEQUENOM CEPH CEPH (92) 92 0.43 123 "by cluster,freq" 2p21-p16 follicle stimulating hormone receptor 1569 rs6165 FSHR 2492 2 49102692 NM_000145 NP_000136 A/G A307T minus 24250694 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.37 123 "by cluster,freq" 2p21-p16 follicle stimulating hormone receptor 1570 rs6165 FSHR 2492 2 49102692 NM_000145 NP_000136 A/G A307T minus 24250694 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.3 123 "by cluster,freq" 2p21-p16 follicle stimulating hormone receptor 1571 rs6165 FSHR 2492 2 49102692 NM_000145 NP_000136 A/G A307T minus 24250694 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.36 123 "by cluster,freq" 2p21-p16 follicle stimulating hormone receptor 1572 rs6165 FSHR 2492 2 49102692 NM_181446 NP_852111 A/G A245T minus 7786 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 82 0.33 123 "by cluster,freq" 2p21-p16 follicle stimulating hormone receptor 1573 rs6165 FSHR 2492 2 49102692 NM_181446 NP_852111 A/G A245T minus 14308073 1303 SEQUENOM CEPH CEPH (92) 92 0.43 123 "by cluster,freq" 2p21-p16 follicle stimulating hormone receptor 1574 rs6165 FSHR 2492 2 49102692 NM_181446 NP_852111 A/G A245T minus 24250694 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.37 123 "by cluster,freq" 2p21-p16 follicle stimulating hormone receptor 1575 rs6165 FSHR 2492 2 49102692 NM_181446 NP_852111 A/G A245T minus 24250694 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.3 123 "by cluster,freq" 2p21-p16 follicle stimulating hormone receptor 1576 rs6165 FSHR 2492 2 49102692 NM_181446 NP_852111 A/G A245T minus 24250694 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.36 123 "by cluster,freq" 2p21-p16 follicle stimulating hormone receptor 1577 rs6166 FSHR 2492 2 49101572 NM_000145 NP_000136 A/G S680N minus 7787 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 84 0.33 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1578 rs6166 FSHR 2492 2 49101572 NM_000145 NP_000136 A/G S680N minus 5586543 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.38 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1579 rs6166 FSHR 2492 2 49101572 NM_000145 NP_000136 A/G S680N minus 5586543 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.33 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1580 rs6166 FSHR 2492 2 49101572 NM_000145 NP_000136 A/G S680N minus 5586543 776 SNP500CANCER AFR1 African / African-American (24) 48 0.44 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1581 rs6166 FSHR 2492 2 49101572 NM_000145 NP_000136 A/G S680N minus 5586543 777 SNP500CANCER HISP1 Hispanic (23) 46 0.37 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1582 rs6166 FSHR 2492 2 49101572 NM_000145 NP_000136 A/G S680N minus 5586543 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.37 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1583 rs6166 FSHR 2492 2 49101572 NM_000145 NP_000136 A/G S680N minus 11457643 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.33 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1584 rs6166 FSHR 2492 2 49101572 NM_000145 NP_000136 A/G S680N minus 11457643 1303 SEQUENOM CEPH CEPH (92) 92 0.33 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1585 rs6166 FSHR 2492 2 49101572 NM_000145 NP_000136 A/G S680N minus 24250675 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.35 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1586 rs6166 FSHR 2492 2 49101572 NM_000145 NP_000136 A/G S680N minus 24250675 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.33 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1587 rs6166 FSHR 2492 2 49101572 NM_000145 NP_000136 A/G S680N minus 24250675 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.33 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1588 rs6166 FSHR 2492 2 49101572 NM_181446 NP_852111 A/G S618N minus 7787 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 84 0.33 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1589 rs6166 FSHR 2492 2 49101572 NM_181446 NP_852111 A/G S618N minus 5586543 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.38 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1590 rs6166 FSHR 2492 2 49101572 NM_181446 NP_852111 A/G S618N minus 5586543 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.33 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1591 rs6166 FSHR 2492 2 49101572 NM_181446 NP_852111 A/G S618N minus 5586543 776 SNP500CANCER AFR1 African / African-American (24) 48 0.44 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1592 rs6166 FSHR 2492 2 49101572 NM_181446 NP_852111 A/G S618N minus 5586543 777 SNP500CANCER HISP1 Hispanic (23) 46 0.37 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1593 rs6166 FSHR 2492 2 49101572 NM_181446 NP_852111 A/G S618N minus 5586543 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.37 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1594 rs6166 FSHR 2492 2 49101572 NM_181446 NP_852111 A/G S618N minus 11457643 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.33 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1595 rs6166 FSHR 2492 2 49101572 NM_181446 NP_852111 A/G S618N minus 11457643 1303 SEQUENOM CEPH CEPH (92) 92 0.33 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1596 rs6166 FSHR 2492 2 49101572 NM_181446 NP_852111 A/G S618N minus 24250675 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.35 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1597 rs6166 FSHR 2492 2 49101572 NM_181446 NP_852111 A/G S618N minus 24250675 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.33 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1598 rs6166 FSHR 2492 2 49101572 NM_181446 NP_852111 A/G S618N minus 24250675 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.33 123 "HapMap,doubleHit,freq,cluster" 2p21-p16 follicle stimulating hormone receptor 1599 rs6167 FSHR 2492 2 49102039 NM_000145 NP_000136 C/G S524R minus 7788 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 123 by freq 2p21-p16 follicle stimulating hormone receptor 1600 rs6167 FSHR 2492 2 49102039 NM_000145 NP_000136 C/G S524R minus 7788 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 2p21-p16 follicle stimulating hormone receptor 1601 rs6167 FSHR 2492 2 49102039 NM_181446 NP_852111 C/G S462R minus 7788 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 123 by freq 2p21-p16 follicle stimulating hormone receptor 1602 rs6167 FSHR 2492 2 49102039 NM_181446 NP_852111 C/G S462R minus 7788 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 2p21-p16 follicle stimulating hormone receptor 1603 rs6174 GH1 2688 17 59348994 NM_000515 NP_000506 C/G S105C minus 7795 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 52 HapMap 17q24.2 growth hormone 1 1604 rs6174 GH1 2688 17 59348994 NM_000515 NP_000506 C/G S105C minus 7795 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 17q24.2 growth hormone 1 1605 rs6174 GH1 2688 17 59348994 NM_022559 NP_072053 C/G S90C minus 7795 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 52 HapMap 17q24.2 growth hormone 1 1606 rs6174 GH1 2688 17 59348994 NM_022559 NP_072053 C/G S90C minus 7795 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 17q24.2 growth hormone 1 1607 rs6174 GH1 2688 17 59348994 NM_022560 NP_072054 C/G S65C minus 7795 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 52 HapMap 17q24.2 growth hormone 1 1608 rs6174 GH1 2688 17 59348994 NM_022560 NP_072054 C/G S65C minus 7795 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 17q24.2 growth hormone 1 1609 rs6180 GHR 2690 5 42754996 NM_000163 NP_000154 A/C I544L plus 7802 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.33 123 "by doubleHit,freq,cluster" 5p13-p12 growth hormone receptor 1610 rs6180 GHR 2690 5 42754996 NM_000163 NP_000154 A/C I544L plus 2123222 771 TSC-CSHL SC_12_A CORIELL Asian (12) 20 0.4 123 "by doubleHit,freq,cluster" 5p13-p12 growth hormone receptor 1611 rs6180 GHR 2690 5 42754996 NM_000163 NP_000154 A/C I544L plus 2123222 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 22 0.32 123 "by doubleHit,freq,cluster" 5p13-p12 growth hormone receptor 1612 rs6180 GHR 2690 5 42754996 NM_000163 NP_000154 A/C I544L plus 2123222 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 12 0.5 123 "by doubleHit,freq,cluster" 5p13-p12 growth hormone receptor 1613 rs6180 GHR 2690 5 42754996 NM_000163 NP_000154 A/C I544L plus 2123222 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 92 0.47 123 "by doubleHit,freq,cluster" 5p13-p12 growth hormone receptor 1614 rs6180 GHR 2690 5 42754996 NM_000163 NP_000154 A/C I544L plus 2123222 1303 SEQUENOM CEPH CEPH (92) 92 0.47 123 "by doubleHit,freq,cluster" 5p13-p12 growth hormone receptor 1615 rs6180 GHR 2690 5 42754996 NM_000163 NP_000154 A/C I544L plus 6903813 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.44 123 "by doubleHit,freq,cluster" 5p13-p12 growth hormone receptor 1616 rs6180 GHR 2690 5 42754996 NM_000163 NP_000154 A/C I544L plus 6903813 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.42 123 "by doubleHit,freq,cluster" 5p13-p12 growth hormone receptor 1617 rs6180 GHR 2690 5 42754996 NM_000163 NP_000154 A/C I544L plus 6903813 776 SNP500CANCER AFR1 African / African-American (24) 48 0.44 123 "by doubleHit,freq,cluster" 5p13-p12 growth hormone receptor 1618 rs6180 GHR 2690 5 42754996 NM_000163 NP_000154 A/C I544L plus 6903813 777 SNP500CANCER HISP1 Hispanic (23) 46 0.46 123 "by doubleHit,freq,cluster" 5p13-p12 growth hormone receptor 1619 rs6180 GHR 2690 5 42754996 NM_000163 NP_000154 A/C I544L plus 6903813 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.44 123 "by doubleHit,freq,cluster" 5p13-p12 growth hormone receptor 1620 rs6180 GHR 2690 5 42754996 NM_000163 NP_000154 A/C I544L plus 24423132 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.46 123 "by doubleHit,freq,cluster" 5p13-p12 growth hormone receptor 1621 rs6180 GHR 2690 5 42754996 NM_000163 NP_000154 A/C I544L plus 24423132 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.39 123 "by doubleHit,freq,cluster" 5p13-p12 growth hormone receptor 1622 rs6180 GHR 2690 5 42754996 NM_000163 NP_000154 A/C I544L plus 24423132 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by doubleHit,freq,cluster" 5p13-p12 growth hormone receptor 1623 rs6181 GHR 2690 5 42735779 NM_000163 NP_000154 A/G R179H plus 7803 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 116 "HapMap,cluster" 5p13-p12 growth hormone receptor 1624 rs6181 GHR 2690 5 42735779 NM_000163 NP_000154 A/G R179H plus 8819745 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 1 116 "HapMap,cluster" 5p13-p12 growth hormone receptor 1625 rs6181 GHR 2690 5 42735779 NM_000163 NP_000154 A/G R179H plus 8819745 775 SNP500CANCER CAUC1 Caucasian (31) 60 1 116 "HapMap,cluster" 5p13-p12 growth hormone receptor 1626 rs6181 GHR 2690 5 42735779 NM_000163 NP_000154 A/G R179H plus 8819745 776 SNP500CANCER AFR1 African / African-American (24) 48 1 116 "HapMap,cluster" 5p13-p12 growth hormone receptor 1627 rs6181 GHR 2690 5 42735779 NM_000163 NP_000154 A/G R179H plus 8819745 777 SNP500CANCER HISP1 Hispanic (23) 46 1 116 "HapMap,cluster" 5p13-p12 growth hormone receptor 1628 rs6181 GHR 2690 5 42735779 NM_000163 NP_000154 A/G R179H plus 8819745 778 SNP500CANCER PAC1 Pacific Rim (24) 48 1 116 "HapMap,cluster" 5p13-p12 growth hormone receptor 1629 rs6181 GHR 2690 5 42735779 NM_000163 NP_000154 A/G R179H plus 8819745 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 116 "HapMap,cluster" 5p13-p12 growth hormone receptor 1630 rs6181 GHR 2690 5 42735779 NM_000163 NP_000154 A/G R179H plus 8819745 1303 SEQUENOM CEPH CEPH (92) 92 1 116 "HapMap,cluster" 5p13-p12 growth hormone receptor 1631 rs6182 GHR 2690 5 42754685 NM_000163 NP_000154 G/T C440F plus 7804 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.1 123 "by submitter,freq,cluster" 5p13-p12 growth hormone receptor 1632 rs6182 GHR 2690 5 42754685 NM_000163 NP_000154 G/T C440F plus 7804 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by submitter,freq,cluster" 5p13-p12 growth hormone receptor 1633 rs6182 GHR 2690 5 42754685 NM_000163 NP_000154 G/T C440F plus 23984036 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 1 123 "by submitter,freq,cluster" 5p13-p12 growth hormone receptor 1634 rs6182 GHR 2690 5 42754685 NM_000163 NP_000154 G/T C440F plus 23984036 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 1 123 "by submitter,freq,cluster" 5p13-p12 growth hormone receptor 1635 rs6182 GHR 2690 5 42754685 NM_000163 NP_000154 G/T C440F plus 23984036 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.17 123 "by submitter,freq,cluster" 5p13-p12 growth hormone receptor 1636 rs6183 GHR 2690 5 42754849 NM_000163 NP_000154 A/C P495T plus 7805 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 52 by freq 5p13-p12 growth hormone receptor 1637 rs6183 GHR 2690 5 42754849 NM_000163 NP_000154 A/C P495T plus 7805 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 5p13-p12 growth hormone receptor 1638 rs6184 GHR 2690 5 42755101 NM_000163 NP_000154 A/C P579T plus 7806 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.1 116 "by cluster,freq" 5p13-p12 growth hormone receptor 1639 rs6184 GHR 2690 5 42755101 NM_000163 NP_000154 A/C P579T plus 6903812 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.05 116 "by cluster,freq" 5p13-p12 growth hormone receptor 1640 rs6184 GHR 2690 5 42755101 NM_000163 NP_000154 A/C P579T plus 6903812 775 SNP500CANCER CAUC1 Caucasian (31) 62 1 116 "by cluster,freq" 5p13-p12 growth hormone receptor 1641 rs6184 GHR 2690 5 42755101 NM_000163 NP_000154 A/C P579T plus 6903812 776 SNP500CANCER AFR1 African / African-American (24) 48 1 116 "by cluster,freq" 5p13-p12 growth hormone receptor 1642 rs6184 GHR 2690 5 42755101 NM_000163 NP_000154 A/C P579T plus 6903812 777 SNP500CANCER HISP1 Hispanic (23) 46 1 116 "by cluster,freq" 5p13-p12 growth hormone receptor 1643 rs6184 GHR 2690 5 42755101 NM_000163 NP_000154 A/C P579T plus 6903812 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.21 116 "by cluster,freq" 5p13-p12 growth hormone receptor 1644 rs6184 GHR 2690 5 42755101 NM_000163 NP_000154 A/C P579T plus 6903812 1303 SEQUENOM CEPH CEPH (92) 92 1 116 "by cluster,freq" 5p13-p12 growth hormone receptor 1645 rs6185 GNRH1 2796 8 25336717 NM_000825 NP_000816 C/G W16S minus 7807 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 8p21-p11.2 gonadotropin-releasing hormone 1 (leutinizing-releasing hormone) 1646 rs6185 GNRH1 2796 8 25336717 NM_000825 NP_000816 C/G W16S minus 3247131 738 YUSUKE JBIC-ALLELE Japanese (752) 1478 0.48 123 "HapMap,doubleHit,submitter,freq,cluster" 8p21-p11.2 gonadotropin-releasing hormone 1 (leutinizing-releasing hormone) 1647 rs6185 GNRH1 2796 8 25336717 NM_000825 NP_000816 C/G W16S minus 5586544 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.28 123 "HapMap,doubleHit,submitter,freq,cluster" 8p21-p11.2 gonadotropin-releasing hormone 1 (leutinizing-releasing hormone) 1648 rs6185 GNRH1 2796 8 25336717 NM_000825 NP_000816 C/G W16S minus 5586544 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 8p21-p11.2 gonadotropin-releasing hormone 1 (leutinizing-releasing hormone) 1649 rs6185 GNRH1 2796 8 25336717 NM_000825 NP_000816 C/G W16S minus 5586544 776 SNP500CANCER AFR1 African / African-American (24) 48 0.04 123 "HapMap,doubleHit,submitter,freq,cluster" 8p21-p11.2 gonadotropin-releasing hormone 1 (leutinizing-releasing hormone) 1650 rs6185 GNRH1 2796 8 25336717 NM_000825 NP_000816 C/G W16S minus 5586544 777 SNP500CANCER HISP1 Hispanic (23) 46 0.26 123 "HapMap,doubleHit,submitter,freq,cluster" 8p21-p11.2 gonadotropin-releasing hormone 1 (leutinizing-releasing hormone) 1651 rs6185 GNRH1 2796 8 25336717 NM_000825 NP_000816 C/G W16S minus 5586544 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.48 123 "HapMap,doubleHit,submitter,freq,cluster" 8p21-p11.2 gonadotropin-releasing hormone 1 (leutinizing-releasing hormone) 1652 rs6185 GNRH1 2796 8 25336717 NM_000825 NP_000816 C/G W16S minus 6731916 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.23 123 "HapMap,doubleHit,submitter,freq,cluster" 8p21-p11.2 gonadotropin-releasing hormone 1 (leutinizing-releasing hormone) 1653 rs6185 GNRH1 2796 8 25336717 NM_000825 NP_000816 C/G W16S minus 6731916 1303 SEQUENOM CEPH CEPH (92) 92 0.19 123 "HapMap,doubleHit,submitter,freq,cluster" 8p21-p11.2 gonadotropin-releasing hormone 1 (leutinizing-releasing hormone) 1654 rs6185 GNRH1 2796 8 25336717 NM_000825 NP_000816 C/G W16S minus 24053467 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "HapMap,doubleHit,submitter,freq,cluster" 8p21-p11.2 gonadotropin-releasing hormone 1 (leutinizing-releasing hormone) 1655 rs6185 GNRH1 2796 8 25336717 NM_000825 NP_000816 C/G W16S minus 24053467 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "HapMap,doubleHit,submitter,freq,cluster" 8p21-p11.2 gonadotropin-releasing hormone 1 (leutinizing-releasing hormone) 1656 rs6185 GNRH1 2796 8 25336717 NM_000825 NP_000816 C/G W16S minus 24053467 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 8p21-p11.2 gonadotropin-releasing hormone 1 (leutinizing-releasing hormone) 1657 rs6190 NR3C1 2908 5 142760530 NM_000176 NP_000167 A/G R23K minus 14865729 693 EGP_SNPS PDR90 NIHPDR 152 0.01 119 "by cluster,freq" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1658 rs6190 NR3C1 2908 5 142760530 NM_000176 NP_000167 A/G R23K minus 14865729 1303 SEQUENOM CEPH CEPH (92) 92 1 119 "by cluster,freq" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1659 rs6192 NR3C1 2908 5 142760405 NM_000176 NP_000167 G/T F65V minus 7814 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 119 "HapMap,cluster" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1660 rs6192 NR3C1 2908 5 142760405 NM_000176 NP_000167 G/T F65V minus 14865730 693 EGP_SNPS PDR90 NIHPDR 152 0.01 119 "HapMap,cluster" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1661 rs6192 NR3C1 2908 5 142760405 NM_000176 NP_000167 G/T F65V minus 14865730 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 119 "HapMap,cluster" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1662 rs6192 NR3C1 2908 5 142760405 NM_000176 NP_000167 G/T F65V minus 14865730 1303 SEQUENOM CEPH CEPH (92) 92 1 119 "HapMap,cluster" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1663 rs6195 NR3C1 2908 5 142759510 NM_000176 NP_000167 A/G N363S minus 7817 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 120 "HapMap,freq,cluster" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1664 rs6195 NR3C1 2908 5 142759510 NM_000176 NP_000167 A/G N363S minus 7817 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.02 120 "HapMap,freq,cluster" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1665 rs6195 NR3C1 2908 5 142759510 NM_000176 NP_000167 A/G N363S minus 7817 901 AFFY AfAm 12 1 120 "HapMap,freq,cluster" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1666 rs6195 NR3C1 2908 5 142759510 NM_000176 NP_000167 A/G N363S minus 7817 902 AFFY Caucasian 24 0.08 120 "HapMap,freq,cluster" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1667 rs6195 NR3C1 2908 5 142759510 NM_000176 NP_000167 A/G N363S minus 7817 903 AFFY Asian 12 1 120 "HapMap,freq,cluster" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1668 rs6195 NR3C1 2908 5 142759510 NM_000176 NP_000167 A/G N363S minus 7817 904 AFFY CEPH 12 1 120 "HapMap,freq,cluster" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1669 rs6195 NR3C1 2908 5 142759510 NM_000176 NP_000167 A/G N363S minus 7817 905 AFFY PDpanel 48 0.02 120 "HapMap,freq,cluster" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1670 rs6195 NR3C1 2908 5 142759510 NM_000176 NP_000167 A/G N363S minus 16339024 865 PHARMGKB_PAAR-SJCRH PA200426 598 0.02 120 "HapMap,freq,cluster" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1671 rs6195 NR3C1 2908 5 142759510 NM_000176 NP_000167 A/G N363S minus 16339024 1303 SEQUENOM CEPH CEPH (92) 92 1 120 "HapMap,freq,cluster" 5q31 "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" 1672 rs6201 HSD3B1 3283 1 119766257 NM_000862 NP_000853 A/G I79V plus 5586591 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.1 123 "by cluster,freq" 1p13.1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1" 1673 rs6201 HSD3B1 3283 1 119766257 NM_000862 NP_000853 A/G I79V plus 5586591 775 SNP500CANCER CAUC1 Caucasian (31) 62 1 123 "by cluster,freq" 1p13.1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1" 1674 rs6201 HSD3B1 3283 1 119766257 NM_000862 NP_000853 A/G I79V plus 5586591 776 SNP500CANCER AFR1 African / African-American (24) 48 0.29 123 "by cluster,freq" 1p13.1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1" 1675 rs6201 HSD3B1 3283 1 119766257 NM_000862 NP_000853 A/G I79V plus 5586591 777 SNP500CANCER HISP1 Hispanic (23) 44 0.09 123 "by cluster,freq" 1p13.1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1" 1676 rs6201 HSD3B1 3283 1 119766257 NM_000862 NP_000853 A/G I79V plus 5586591 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.04 123 "by cluster,freq" 1p13.1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1" 1677 rs6201 HSD3B1 3283 1 119766257 NM_000862 NP_000853 A/G I79V plus 24811836 1303 SEQUENOM CEPH CEPH (92) 184 0.47 123 "by cluster,freq" 1p13.1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1" 1678 rs6205 HSD3B1 3283 1 119769044 NM_000862 NP_000853 C/T F286L plus 7827 1303 SEQUENOM CEPH CEPH (92) 92 0.07 123 by freq 1p13.1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1" 1679 rs6211 HSD3B2 3284 1 119674220 NM_000198 NP_000189 C/G E94Q plus 7833 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 113 "by cluster,freq" 1p13.1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2" 1680 rs6211 HSD3B2 3284 1 119674220 NM_000198 NP_000189 C/G E94Q plus 5586599 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.01 113 "by cluster,freq" 1p13.1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2" 1681 rs6211 HSD3B2 3284 1 119674220 NM_000198 NP_000189 C/G E94Q plus 5586599 775 SNP500CANCER CAUC1 Caucasian (31) 62 1 113 "by cluster,freq" 1p13.1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2" 1682 rs6211 HSD3B2 3284 1 119674220 NM_000198 NP_000189 C/G E94Q plus 5586599 776 SNP500CANCER AFR1 African / African-American (24) 48 0.04 113 "by cluster,freq" 1p13.1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2" 1683 rs6211 HSD3B2 3284 1 119674220 NM_000198 NP_000189 C/G E94Q plus 5586599 777 SNP500CANCER HISP1 Hispanic (23) 46 1 113 "by cluster,freq" 1p13.1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2" 1684 rs6211 HSD3B2 3284 1 119674220 NM_000198 NP_000189 C/G E94Q plus 5586599 778 SNP500CANCER PAC1 Pacific Rim (24) 46 1 113 "by cluster,freq" 1p13.1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2" 1685 rs6211 HSD3B2 3284 1 119674220 NM_000198 NP_000189 C/G E94Q plus 5586599 1303 SEQUENOM CEPH CEPH (92) 92 0.18 113 "by cluster,freq" 1p13.1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2" 1686 rs6232 PCSK1 5122 5 95777541 NM_000439 NP_000430 A/G N221D minus 7854 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 123 "HapMap,freq" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1687 rs6232 PCSK1 5122 5 95777541 NM_000439 NP_000430 A/G N221D minus 7854 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.04 123 "HapMap,freq" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1688 rs6232 PCSK1 5122 5 95777541 NM_000439 NP_000430 A/G N221D minus 7854 1303 SEQUENOM CEPH CEPH (92) 92 0.22 123 "HapMap,freq" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1689 rs6232 PCSK1 5122 5 95777541 NM_000439 NP_000430 A/G N221D minus 24445734 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "HapMap,freq" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1690 rs6232 PCSK1 5122 5 95777541 NM_000439 NP_000430 A/G N221D minus 24445734 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "HapMap,freq" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1691 rs6232 PCSK1 5122 5 95777541 NM_000439 NP_000430 A/G N221D minus 24445734 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,freq" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1692 rs6234 PCSK1 5122 5 95754730 NM_000439 NP_000430 C/G Q665E minus 7856 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 84 0.33 123 "by cluster,freq" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1693 rs6234 PCSK1 5122 5 95754730 NM_000439 NP_000430 C/G Q665E minus 7856 1303 SEQUENOM CEPH CEPH (92) 92 0.33 123 "by cluster,freq" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1694 rs6234 PCSK1 5122 5 95754730 NM_000439 NP_000430 C/G Q665E minus 24001977 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.19 123 "by cluster,freq" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1695 rs6234 PCSK1 5122 5 95754730 NM_000439 NP_000430 C/G Q665E minus 24001977 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "by cluster,freq" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1696 rs6234 PCSK1 5122 5 95754730 NM_000439 NP_000430 C/G Q665E minus 24001977 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.31 123 "by cluster,freq" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1697 rs6235 PCSK1 5122 5 95754654 NM_000439 NP_000430 C/G S690T minus 7857 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.1 123 "HapMap,submitter,freq,cluster" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1698 rs6235 PCSK1 5122 5 95754654 NM_000439 NP_000430 C/G S690T minus 7857 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.27 123 "HapMap,submitter,freq,cluster" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1699 rs6235 PCSK1 5122 5 95754654 NM_000439 NP_000430 C/G S690T minus 7857 1303 SEQUENOM CEPH CEPH (92) 92 0.4 123 "HapMap,submitter,freq,cluster" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1700 rs6235 PCSK1 5122 5 95754654 NM_000439 NP_000430 C/G S690T minus 24001971 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.19 123 "HapMap,submitter,freq,cluster" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1701 rs6235 PCSK1 5122 5 95754654 NM_000439 NP_000430 C/G S690T minus 24001971 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "HapMap,submitter,freq,cluster" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1702 rs6235 PCSK1 5122 5 95754654 NM_000439 NP_000430 C/G S690T minus 24001971 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.31 123 "HapMap,submitter,freq,cluster" 5q15-q21 proprotein convertase subtilisin/kexin type 1 1703 rs6259 SHBG 6462 17 7477252 NM_001040 NP_001031 A/G D356N plus 5586913 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.08 123 "by cluster,freq" 17p13-p12 sex hormone-binding globulin 1704 rs6259 SHBG 6462 17 7477252 NM_001040 NP_001031 A/G D356N plus 5586913 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.1 123 "by cluster,freq" 17p13-p12 sex hormone-binding globulin 1705 rs6259 SHBG 6462 17 7477252 NM_001040 NP_001031 A/G D356N plus 5586913 776 SNP500CANCER AFR1 African / African-American (24) 48 0.04 123 "by cluster,freq" 17p13-p12 sex hormone-binding globulin 1706 rs6259 SHBG 6462 17 7477252 NM_001040 NP_001031 A/G D356N plus 5586913 777 SNP500CANCER HISP1 Hispanic (23) 46 0.09 123 "by cluster,freq" 17p13-p12 sex hormone-binding globulin 1707 rs6259 SHBG 6462 17 7477252 NM_001040 NP_001031 A/G D356N plus 5586913 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.09 123 "by cluster,freq" 17p13-p12 sex hormone-binding globulin 1708 rs6259 SHBG 6462 17 7477252 NM_001040 NP_001031 A/G D356N plus 5586913 1303 SEQUENOM CEPH CEPH (92) 92 0.26 123 "by cluster,freq" 17p13-p12 sex hormone-binding globulin 1709 rs6260 SHBG 6462 17 7474289 NM_001040 NP_001031 A/G R25H plus 7883 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.1 118 "HapMap,freq,cluster" 17p13-p12 sex hormone-binding globulin 1710 rs6260 SHBG 6462 17 7474289 NM_001040 NP_001031 A/G R25H plus 12675622 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.04 118 "HapMap,freq,cluster" 17p13-p12 sex hormone-binding globulin 1711 rs6260 SHBG 6462 17 7474289 NM_001040 NP_001031 A/G R25H plus 12675622 775 SNP500CANCER CAUC1 Caucasian (31) 62 1 118 "HapMap,freq,cluster" 17p13-p12 sex hormone-binding globulin 1712 rs6260 SHBG 6462 17 7474289 NM_001040 NP_001031 A/G R25H plus 12675622 776 SNP500CANCER AFR1 African / African-American (24) 48 0.17 118 "HapMap,freq,cluster" 17p13-p12 sex hormone-binding globulin 1713 rs6260 SHBG 6462 17 7474289 NM_001040 NP_001031 A/G R25H plus 12675622 777 SNP500CANCER HISP1 Hispanic (23) 46 1 118 "HapMap,freq,cluster" 17p13-p12 sex hormone-binding globulin 1714 rs6260 SHBG 6462 17 7474289 NM_001040 NP_001031 A/G R25H plus 12675622 778 SNP500CANCER PAC1 Pacific Rim (24) 48 1 118 "HapMap,freq,cluster" 17p13-p12 sex hormone-binding globulin 1715 rs6260 SHBG 6462 17 7474289 NM_001040 NP_001031 A/G R25H plus 12675622 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 118 "HapMap,freq,cluster" 17p13-p12 sex hormone-binding globulin 1716 rs6260 SHBG 6462 17 7474289 NM_001040 NP_001031 A/G R25H plus 12675622 1303 SEQUENOM CEPH CEPH (92) 92 1 118 "HapMap,freq,cluster" 17p13-p12 sex hormone-binding globulin 1717 rs6262 DDC 1644 7 50370129 NM_000790 NP_000781 C/T P210L minus 16361341 693 EGP_SNPS PDR90 NIHPDR 180 0.01 121 "HapMap,freq,cluster" 7p11 dopa decarboxylase (aromatic L-amino acid decarboxylase) 1718 rs6262 DDC 1644 7 50370129 NM_000790 NP_000781 C/T P210L minus 16361341 885 TSC-CSHL HapMap-CEPH-30-trios 118 1 121 "HapMap,freq,cluster" 7p11 dopa decarboxylase (aromatic L-amino acid decarboxylase) 1719 rs6262 DDC 1644 7 50370129 NM_000790 NP_000781 C/T P210L minus 16361341 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "HapMap,freq,cluster" 7p11 dopa decarboxylase (aromatic L-amino acid decarboxylase) 1720 rs6263 DDC 1644 7 50370109 NM_000790 NP_000781 A/G M217V minus 16361342 693 EGP_SNPS PDR90 NIHPDR 180 0.03 121 "HapMap,freq,cluster" 7p11 dopa decarboxylase (aromatic L-amino acid decarboxylase) 1721 rs6263 DDC 1644 7 50370109 NM_000790 NP_000781 A/G M217V minus 16361342 885 TSC-CSHL HapMap-CEPH-30-trios 114 0.04 121 "HapMap,freq,cluster" 7p11 dopa decarboxylase (aromatic L-amino acid decarboxylase) 1722 rs6263 DDC 1644 7 50370109 NM_000790 NP_000781 A/G M217V minus 16361342 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "HapMap,freq,cluster" 7p11 dopa decarboxylase (aromatic L-amino acid decarboxylase) 1723 rs6265 BDNF 627 11 27636492 NM_001709 NP_001700 A/G V66M minus 7889 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 72 0.33 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1724 rs6265 BDNF 627 11 27636492 NM_001709 NP_001700 A/G V66M minus 12586728 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1725 rs6265 BDNF 627 11 27636492 NM_001709 NP_001700 A/G V66M minus 24149102 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1726 rs6265 BDNF 627 11 27636492 NM_001709 NP_001700 A/G V66M minus 24149102 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1727 rs6265 BDNF 627 11 27636492 NM_001709 NP_001700 A/G V66M minus 24149102 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1728 rs6265 BDNF 627 11 27636492 NM_170731 NP_733927 A/G V74M minus 7889 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 72 0.33 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1729 rs6265 BDNF 627 11 27636492 NM_170731 NP_733927 A/G V74M minus 12586728 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1730 rs6265 BDNF 627 11 27636492 NM_170731 NP_733927 A/G V74M minus 24149102 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1731 rs6265 BDNF 627 11 27636492 NM_170731 NP_733927 A/G V74M minus 24149102 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1732 rs6265 BDNF 627 11 27636492 NM_170731 NP_733927 A/G V74M minus 24149102 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1733 rs6265 BDNF 627 11 27636492 NM_170732 NP_733928 A/G V66M minus 7889 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 72 0.33 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1734 rs6265 BDNF 627 11 27636492 NM_170732 NP_733928 A/G V66M minus 12586728 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1735 rs6265 BDNF 627 11 27636492 NM_170732 NP_733928 A/G V66M minus 24149102 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1736 rs6265 BDNF 627 11 27636492 NM_170732 NP_733928 A/G V66M minus 24149102 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1737 rs6265 BDNF 627 11 27636492 NM_170732 NP_733928 A/G V66M minus 24149102 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1738 rs6265 BDNF 627 11 27636492 NM_170733 NP_733929 A/G V66M minus 7889 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 72 0.33 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1739 rs6265 BDNF 627 11 27636492 NM_170733 NP_733929 A/G V66M minus 12586728 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1740 rs6265 BDNF 627 11 27636492 NM_170733 NP_733929 A/G V66M minus 24149102 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1741 rs6265 BDNF 627 11 27636492 NM_170733 NP_733929 A/G V66M minus 24149102 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1742 rs6265 BDNF 627 11 27636492 NM_170733 NP_733929 A/G V66M minus 24149102 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1743 rs6265 BDNF 627 11 27636492 NM_170734 NP_733930 A/G V81M minus 7889 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 72 0.33 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1744 rs6265 BDNF 627 11 27636492 NM_170734 NP_733930 A/G V81M minus 12586728 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1745 rs6265 BDNF 627 11 27636492 NM_170734 NP_733930 A/G V81M minus 24149102 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1746 rs6265 BDNF 627 11 27636492 NM_170734 NP_733930 A/G V81M minus 24149102 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1747 rs6265 BDNF 627 11 27636492 NM_170734 NP_733930 A/G V81M minus 24149102 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1748 rs6265 BDNF 627 11 27636492 NM_170735 NP_733931 A/G V66M minus 7889 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 72 0.33 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1749 rs6265 BDNF 627 11 27636492 NM_170735 NP_733931 A/G V66M minus 12586728 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1750 rs6265 BDNF 627 11 27636492 NM_170735 NP_733931 A/G V66M minus 24149102 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1751 rs6265 BDNF 627 11 27636492 NM_170735 NP_733931 A/G V66M minus 24149102 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1752 rs6265 BDNF 627 11 27636492 NM_170735 NP_733931 A/G V66M minus 24149102 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by doubleHit,submitter,freq,cluster" 11p13 brain-derived neurotrophic factor 1753 rs6266 CNTF 1270 11 58148513 NM_000614 NP_000605 A/G H182R plus 7890 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.03 52 by freq 11q12.2 ciliary neurotrophic factor 1754 rs6266 CNTF 1270 11 58148513 NM_000614 NP_000605 A/G H182R plus 7890 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 11q12.2 ciliary neurotrophic factor 1755 rs6267 COMT 1312 22 18324817 NM_000754 NP_000745 G/T A72S plus 4479991 506 NCBI NIHPDR NIHPDR 76 0.07 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1756 rs6267 COMT 1312 22 18324817 NM_000754 NP_000745 G/T A72S plus 6903718 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.03 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1757 rs6267 COMT 1312 22 18324817 NM_000754 NP_000745 G/T A72S plus 6903718 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.02 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1758 rs6267 COMT 1312 22 18324817 NM_000754 NP_000745 G/T A72S plus 6903718 776 SNP500CANCER AFR1 African / African-American (24) 48 0.02 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1759 rs6267 COMT 1312 22 18324817 NM_000754 NP_000745 G/T A72S plus 6903718 777 SNP500CANCER HISP1 Hispanic (23) 46 0.02 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1760 rs6267 COMT 1312 22 18324817 NM_000754 NP_000745 G/T A72S plus 6903718 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.04 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1761 rs6267 COMT 1312 22 18324817 NM_000754 NP_000745 G/T A72S plus 12673755 693 EGP_SNPS PDR90 NIHPDR 164 0.06 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1762 rs6267 COMT 1312 22 18324817 NM_000754 NP_000745 G/T A72S plus 12673755 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1763 rs6267 COMT 1312 22 18324817 NM_000754 NP_000745 G/T A72S plus 24211194 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1764 rs6267 COMT 1312 22 18324817 NM_000754 NP_000745 G/T A72S plus 24211194 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1765 rs6267 COMT 1312 22 18324817 NM_000754 NP_000745 G/T A72S plus 24211194 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.07 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1766 rs6267 COMT 1312 22 18324817 NM_007310 NP_009294 G/T A22S plus 4479991 506 NCBI NIHPDR NIHPDR 76 0.07 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1767 rs6267 COMT 1312 22 18324817 NM_007310 NP_009294 G/T A22S plus 6903718 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.03 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1768 rs6267 COMT 1312 22 18324817 NM_007310 NP_009294 G/T A22S plus 6903718 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.02 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1769 rs6267 COMT 1312 22 18324817 NM_007310 NP_009294 G/T A22S plus 6903718 776 SNP500CANCER AFR1 African / African-American (24) 48 0.02 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1770 rs6267 COMT 1312 22 18324817 NM_007310 NP_009294 G/T A22S plus 6903718 777 SNP500CANCER HISP1 Hispanic (23) 46 0.02 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1771 rs6267 COMT 1312 22 18324817 NM_007310 NP_009294 G/T A22S plus 6903718 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.04 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1772 rs6267 COMT 1312 22 18324817 NM_007310 NP_009294 G/T A22S plus 12673755 693 EGP_SNPS PDR90 NIHPDR 164 0.06 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1773 rs6267 COMT 1312 22 18324817 NM_007310 NP_009294 G/T A22S plus 12673755 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1774 rs6267 COMT 1312 22 18324817 NM_007310 NP_009294 G/T A22S plus 24211194 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1775 rs6267 COMT 1312 22 18324817 NM_007310 NP_009294 G/T A22S plus 24211194 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1776 rs6267 COMT 1312 22 18324817 NM_007310 NP_009294 G/T A22S plus 24211194 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.07 123 "by cluster,freq" 22q11.21 catechol-O-methyltransferase 1777 rs6270 COMT 1312 22 18324704 NM_000754 NP_000745 C/G C34S plus 7895 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 70 0.33 113 "HapMap,cluster" 22q11.21 catechol-O-methyltransferase 1778 rs6270 COMT 1312 22 18324704 NM_000754 NP_000745 C/G C34S plus 5606262 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 1 113 "HapMap,cluster" 22q11.21 catechol-O-methyltransferase 1779 rs6270 COMT 1312 22 18324704 NM_000754 NP_000745 C/G C34S plus 5606262 775 SNP500CANCER CAUC1 Caucasian (31) 60 1 113 "HapMap,cluster" 22q11.21 catechol-O-methyltransferase 1780 rs6270 COMT 1312 22 18324704 NM_000754 NP_000745 C/G C34S plus 5606262 776 SNP500CANCER AFR1 African / African-American (24) 48 1 113 "HapMap,cluster" 22q11.21 catechol-O-methyltransferase 1781 rs6270 COMT 1312 22 18324704 NM_000754 NP_000745 C/G C34S plus 5606262 777 SNP500CANCER HISP1 Hispanic (23) 46 1 113 "HapMap,cluster" 22q11.21 catechol-O-methyltransferase 1782 rs6270 COMT 1312 22 18324704 NM_000754 NP_000745 C/G C34S plus 5606262 778 SNP500CANCER PAC1 Pacific Rim (24) 48 1 113 "HapMap,cluster" 22q11.21 catechol-O-methyltransferase 1783 rs6270 COMT 1312 22 18324704 NM_000754 NP_000745 C/G C34S plus 5606262 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 113 "HapMap,cluster" 22q11.21 catechol-O-methyltransferase 1784 rs6270 COMT 1312 22 18324704 NM_000754 NP_000745 C/G C34S plus 5606262 1303 SEQUENOM CEPH CEPH (92) 92 1 113 "HapMap,cluster" 22q11.21 catechol-O-methyltransferase 1785 rs6271 DBH 1621 9 133551828 NM_000787 NP_000778 C/T R535C plus 7898 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.1 123 "by submitter,freq,cluster" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 1786 rs6271 DBH 1621 9 133551828 NM_000787 NP_000778 C/T R535C plus 7898 1303 SEQUENOM CEPH CEPH (92) 92 0.04 123 "by submitter,freq,cluster" 9q34 dopamine beta-hydroxylase (dopamine beta-monooxygenase) 1787 rs6280 DRD3 1814 3 115373505 NM_000796 NP_000787 C/T G9S plus 7908 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.33 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1788 rs6280 DRD3 1814 3 115373505 NM_000796 NP_000787 C/T G9S plus 1893415 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.35 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1789 rs6280 DRD3 1814 3 115373505 NM_000796 NP_000787 C/T G9S plus 1893415 1303 SEQUENOM CEPH CEPH (92) 92 0.15 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1790 rs6280 DRD3 1814 3 115373505 NM_000796 NP_000787 C/T G9S plus 6312535 583 KIDDLAB PO000020C 182 0.32 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1791 rs6280 DRD3 1814 3 115373505 NM_033658 NP_387507 C/T G9S plus 7908 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.33 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1792 rs6280 DRD3 1814 3 115373505 NM_033658 NP_387507 C/T G9S plus 1893415 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.35 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1793 rs6280 DRD3 1814 3 115373505 NM_033658 NP_387507 C/T G9S plus 1893415 1303 SEQUENOM CEPH CEPH (92) 92 0.15 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1794 rs6280 DRD3 1814 3 115373505 NM_033658 NP_387507 C/T G9S plus 6312535 583 KIDDLAB PO000020C 182 0.32 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1795 rs6280 DRD3 1814 3 115373505 NM_033659 NP_387508 C/T G9S plus 7908 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.33 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1796 rs6280 DRD3 1814 3 115373505 NM_033659 NP_387508 C/T G9S plus 1893415 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.35 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1797 rs6280 DRD3 1814 3 115373505 NM_033659 NP_387508 C/T G9S plus 1893415 1303 SEQUENOM CEPH CEPH (92) 92 0.15 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1798 rs6280 DRD3 1814 3 115373505 NM_033659 NP_387508 C/T G9S plus 6312535 583 KIDDLAB PO000020C 182 0.32 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1799 rs6280 DRD3 1814 3 115373505 NM_033660 NP_387509 C/T G9S plus 7908 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.33 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1800 rs6280 DRD3 1814 3 115373505 NM_033660 NP_387509 C/T G9S plus 1893415 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.35 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1801 rs6280 DRD3 1814 3 115373505 NM_033660 NP_387509 C/T G9S plus 1893415 1303 SEQUENOM CEPH CEPH (92) 92 0.15 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1802 rs6280 DRD3 1814 3 115373505 NM_033660 NP_387509 C/T G9S plus 6312535 583 KIDDLAB PO000020C 182 0.32 121 "HapMap,doubleHit,submitter,freq,cluster" 3q13.3 dopamine receptor D3 1803 rs6282 DRD5 1816 4 9460185 NM_000798 NP_000789 G/T L88R plus 7910 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.1 52 by freq 4p16.1 dopamine receptor D5 1804 rs6282 DRD5 1816 4 9460185 NM_000798 NP_000789 G/T L88R plus 7910 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 4p16.1 dopamine receptor D5 1805 rs6299 HTR1D 3352 1 23265225 NM_000864 NP_000855 C/T S265L minus 7927 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 78 0.03 52 by freq 1p36.3-p34.3 5-hydroxytryptamine (serotonin) receptor 1D 1806 rs6299 HTR1D 3352 1 23265225 NM_000864 NP_000855 C/T S265L minus 7927 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 1p36.3-p34.3 5-hydroxytryptamine (serotonin) receptor 1D 1807 rs6303 HTR1E 3354 6 87782556 NM_000865 NP_000856 C/T S262F plus 7931 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.03 52 by freq 6q14-q15 5-hydroxytryptamine (serotonin) receptor 1E 1808 rs6303 HTR1E 3354 6 87782556 NM_000865 NP_000856 C/T S262F plus 7931 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 6q14-q15 5-hydroxytryptamine (serotonin) receptor 1E 1809 rs6308 HTR2A 3356 13 46307049 NM_000621 NP_000612 C/T A447V minus 7936 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 72 0.03 52 by freq 13q14-q21 5-hydroxytryptamine (serotonin) receptor 2A 1810 rs6308 HTR2A 3356 13 46307049 NM_000621 NP_000612 C/T A447V minus 7936 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 13q14-q21 5-hydroxytryptamine (serotonin) receptor 2A 1811 rs6314 HTR2A 3356 13 46307035 NM_000621 NP_000612 C/T H452Y minus 7942 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 76 0.1 123 by freq 13q14-q21 5-hydroxytryptamine (serotonin) receptor 2A 1812 rs6314 HTR2A 3356 13 46307035 NM_000621 NP_000612 C/T H452Y minus 7942 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 13q14-q21 5-hydroxytryptamine (serotonin) receptor 2A 1813 rs6314 HTR2A 3356 13 46307035 NM_000621 NP_000612 C/T H452Y minus 24431808 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 by freq 13q14-q21 5-hydroxytryptamine (serotonin) receptor 2A 1814 rs6314 HTR2A 3356 13 46307035 NM_000621 NP_000612 C/T H452Y minus 24431808 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 by freq 13q14-q21 5-hydroxytryptamine (serotonin) receptor 2A 1815 rs6314 HTR2A 3356 13 46307035 NM_000621 NP_000612 C/T H452Y minus 24431808 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 by freq 13q14-q21 5-hydroxytryptamine (serotonin) receptor 2A 1816 rs6330 NGFB 4803 1 115541355 NM_002506 NP_002497 C/T A35V minus 7958 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.33 120 "HapMap,doubleHit,submitter,freq,cluster" 1p13.1 "nerve growth factor, beta polypeptide" 1817 rs6330 NGFB 4803 1 115541355 NM_002506 NP_002497 C/T A35V minus 4044499 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.48 120 "HapMap,doubleHit,submitter,freq,cluster" 1p13.1 "nerve growth factor, beta polypeptide" 1818 rs6330 NGFB 4803 1 115541355 NM_002506 NP_002497 C/T A35V minus 4044499 1303 SEQUENOM CEPH CEPH (92) 92 0.4 120 "HapMap,doubleHit,submitter,freq,cluster" 1p13.1 "nerve growth factor, beta polypeptide" 1819 rs6330 NGFB 4803 1 115541355 NM_002506 NP_002497 C/T A35V minus 4954390 738 YUSUKE JBIC-ALLELE Japanese (752) 920 0.17 120 "HapMap,doubleHit,submitter,freq,cluster" 1p13.1 "nerve growth factor, beta polypeptide" 1820 rs6330 NGFB 4803 1 115541355 NM_002506 NP_002497 C/T A35V minus 15356259 846 IIPGA-WEISS-MARTINEZ D-0 CORIELL African-American 48 0.25 120 "HapMap,doubleHit,submitter,freq,cluster" 1p13.1 "nerve growth factor, beta polypeptide" 1821 rs6330 NGFB 4803 1 115541355 NM_002506 NP_002497 C/T A35V minus 15356259 847 IIPGA-WEISS-MARTINEZ E-0 CEPH 40 0.45 120 "HapMap,doubleHit,submitter,freq,cluster" 1p13.1 "nerve growth factor, beta polypeptide" 1822 rs6330 NGFB 4803 1 115541355 NM_002506 NP_002497 C/T A35V minus 15356259 848 IIPGA-WEISS-MARTINEZ E-1 CEPH 6 0.33 120 "HapMap,doubleHit,submitter,freq,cluster" 1p13.1 "nerve growth factor, beta polypeptide" 1823 rs6336 NTRK1 4914 1 153661991 NM_002529 NP_002520 C/T H604Y plus 7964 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.03 123 by freq 1q21-q22 "neurotrophic tyrosine kinase, receptor, type 1" 1824 rs6336 NTRK1 4914 1 153661991 NM_002529 NP_002520 C/T H604Y plus 6416724 1303 SEQUENOM CEPH CEPH (92) 92 0.02 123 by freq 1q21-q22 "neurotrophic tyrosine kinase, receptor, type 1" 1825 rs6336 NTRK1 4914 1 153661991 NM_002529 NP_002520 C/T H604Y plus 28447275 914 HG_BONN_CNS_SNPS EURO96 European 182 0.07 123 by freq 1q21-q22 "neurotrophic tyrosine kinase, receptor, type 1" 1826 rs6339 NTRK1 4914 1 153662019 NM_002529 NP_002520 G/T G613V plus 7967 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.03 123 by freq 1q21-q22 "neurotrophic tyrosine kinase, receptor, type 1" 1827 rs6339 NTRK1 4914 1 153662019 NM_002529 NP_002520 G/T G613V plus 6416725 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 1q21-q22 "neurotrophic tyrosine kinase, receptor, type 1" 1828 rs6339 NTRK1 4914 1 153662019 NM_002529 NP_002520 G/T G613V plus 28447276 914 HG_BONN_CNS_SNPS EURO96 European 182 0.07 123 by freq 1q21-q22 "neurotrophic tyrosine kinase, receptor, type 1" 1829 rs6355 SLC6A4 6532 17 25572936 NM_001045 NP_001036 C/G G56A minus 7983 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.03 52 by freq 17q11.1-q12 "solute carrier family 6 (neurotransmitter transporter, serotonin), member 4" 1830 rs6355 SLC6A4 6532 17 25572936 NM_001045 NP_001036 C/G G56A minus 7983 1303 SEQUENOM CEPH CEPH (92) 92 0.01 52 by freq 17q11.1-q12 "solute carrier family 6 (neurotransmitter transporter, serotonin), member 4" 1831 rs6356 TH 7054 11 2147527 NM_000360 NP_000351 A/G V81M minus 7984 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.33 120 "HapMap,freq" 11p15.5 tyrosine hydroxylase 1832 rs6356 TH 7054 11 2147527 NM_000360 NP_000351 A/G V81M minus 7984 885 TSC-CSHL HapMap-CEPH-30-trios 116 0.42 120 "HapMap,freq" 11p15.5 tyrosine hydroxylase 1833 rs6356 TH 7054 11 2147527 NM_000360 NP_000351 A/G V81M minus 16316425 1303 SEQUENOM CEPH CEPH (92) 92 0.34 120 "HapMap,freq" 11p15.5 tyrosine hydroxylase 1834 rs6356 TH 7054 11 2147527 NM_199292 NP_954986 A/G V112M minus 7984 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.33 120 "HapMap,freq" 11p15.5 tyrosine hydroxylase 1835 rs6356 TH 7054 11 2147527 NM_199292 NP_954986 A/G V112M minus 7984 885 TSC-CSHL HapMap-CEPH-30-trios 116 0.42 120 "HapMap,freq" 11p15.5 tyrosine hydroxylase 1836 rs6356 TH 7054 11 2147527 NM_199292 NP_954986 A/G V112M minus 16316425 1303 SEQUENOM CEPH CEPH (92) 92 0.34 120 "HapMap,freq" 11p15.5 tyrosine hydroxylase 1837 rs6356 TH 7054 11 2147527 NM_199293 NP_954987 A/G V108M minus 7984 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 74 0.33 120 "HapMap,freq" 11p15.5 tyrosine hydroxylase 1838 rs6356 TH 7054 11 2147527 NM_199293 NP_954987 A/G V108M minus 7984 885 TSC-CSHL HapMap-CEPH-30-trios 116 0.42 120 "HapMap,freq" 11p15.5 tyrosine hydroxylase 1839 rs6356 TH 7054 11 2147527 NM_199293 NP_954987 A/G V108M minus 16316425 1303 SEQUENOM CEPH CEPH (92) 92 0.34 120 "HapMap,freq" 11p15.5 tyrosine hydroxylase 1840 rs6405 CYP11B1 1584 8 143958203 NM_000497 NP_000488 A/G C10Y minus 8043 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 52 by freq 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 1841 rs6405 CYP11B1 1584 8 143958203 NM_000497 NP_000488 A/G C10Y minus 8043 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 1842 rs6407 CYP11B1 1584 8 143954209 NM_000497 NP_000488 A/G A348T minus 8046 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 52 by freq 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 1843 rs6407 CYP11B1 1584 8 143954209 NM_000497 NP_000488 A/G A348T minus 8046 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 8q21 "cytochrome P450, family 11, subfamily B, polypeptide 1" 1844 rs6438 CYP11B2 1585 8 143996174 NM_000498 NP_000489 A/G A29T minus 8081 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 84 0.03 123 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 1845 rs6438 CYP11B2 1585 8 143996174 NM_000498 NP_000489 A/G A29T minus 23370114 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 1846 rs6438 CYP11B2 1585 8 143996174 NM_000498 NP_000489 A/G A29T minus 23370114 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 1847 rs6438 CYP11B2 1585 8 143996174 NM_000498 NP_000489 A/G A29T minus 23370114 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 8q21-q22 "cytochrome P450, family 11, subfamily B, polypeptide 2" 1848 rs6472 CYP21A2 1589 6 32115828 NM_000500 NP_000491 C/G S269T plus 8123 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.33 123 "by cluster,freq" 6p21.3 "cytochrome P450, family 21, subfamily A, polypeptide 2" 1849 rs6472 CYP21A2 1589 6 32115828 NM_000500 NP_000491 C/G S269T plus 2990663 738 YUSUKE JBIC-ALLELE Japanese (752) 1478 0.1 123 "by cluster,freq" 6p21.3 "cytochrome P450, family 21, subfamily A, polypeptide 2" 1850 rs6472 CYP21A2 1589 6 32115828 NM_000500 NP_000491 C/G S269T plus 13097014 1303 SEQUENOM CEPH CEPH (92) 92 0.04 123 "by cluster,freq" 6p21.3 "cytochrome P450, family 21, subfamily A, polypeptide 2" 1851 rs6472 CYP21A2 1589 6 32115828 NM_000500 NP_000491 C/G S269T plus 24796289 1303 SEQUENOM CEPH CEPH (92) 184 0.25 123 "by cluster,freq" 6p21.3 "cytochrome P450, family 21, subfamily A, polypeptide 2" 1852 rs6474 CYP21A2 1589 6 32114865 NM_000500 NP_000491 A/G R103K plus 8125 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 84 0.33 113 "by doubleHit,freq,cluster" 6p21.3 "cytochrome P450, family 21, subfamily A, polypeptide 2" 1853 rs6476 CYP21A2 1589 6 32115572 NM_000500 NP_000491 A/T M240K plus 8127 504 WIAF-CSNP WIAF-CSNP-POP1 "European (30), Asians (14) African Americans (10) and African Pygmies (7)" 86 0.03 120 "by doubleHit,freq,cluster" 6p21.3 "cytochrome P450, family 21, subfamily A, polypeptide 2" 1854 rs6501 RECQL 5965 12 21515836 NM_002907 NP_002898 A/C K487T minus 8154 507 WIAF-CSNP WIAF-CSNP-MITOGPOP2 European (10) and African American (10) 38 0.03 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1855 rs6501 RECQL 5965 12 21515836 NM_002907 NP_002898 A/C K487T minus 6903928 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1856 rs6501 RECQL 5965 12 21515836 NM_002907 NP_002898 A/C K487T minus 6903928 775 SNP500CANCER CAUC1 Caucasian (31) 62 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1857 rs6501 RECQL 5965 12 21515836 NM_002907 NP_002898 A/C K487T minus 6903928 776 SNP500CANCER AFR1 African / African-American (24) 48 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1858 rs6501 RECQL 5965 12 21515836 NM_002907 NP_002898 A/C K487T minus 6903928 777 SNP500CANCER HISP1 Hispanic (23) 46 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1859 rs6501 RECQL 5965 12 21515836 NM_002907 NP_002898 A/C K487T minus 6903928 778 SNP500CANCER PAC1 Pacific Rim (24) 48 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1860 rs6501 RECQL 5965 12 21515836 NM_002907 NP_002898 A/C K487T minus 6903928 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1861 rs6501 RECQL 5965 12 21515836 NM_002907 NP_002898 A/C K487T minus 23349845 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1862 rs6501 RECQL 5965 12 21515836 NM_002907 NP_002898 A/C K487T minus 23349845 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1863 rs6501 RECQL 5965 12 21515836 NM_002907 NP_002898 A/C K487T minus 23349845 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1864 rs6501 RECQL 5965 12 21515836 NM_032941 NP_116559 A/C K487T minus 8154 507 WIAF-CSNP WIAF-CSNP-MITOGPOP2 European (10) and African American (10) 38 0.03 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1865 rs6501 RECQL 5965 12 21515836 NM_032941 NP_116559 A/C K487T minus 6903928 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1866 rs6501 RECQL 5965 12 21515836 NM_032941 NP_116559 A/C K487T minus 6903928 775 SNP500CANCER CAUC1 Caucasian (31) 62 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1867 rs6501 RECQL 5965 12 21515836 NM_032941 NP_116559 A/C K487T minus 6903928 776 SNP500CANCER AFR1 African / African-American (24) 48 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1868 rs6501 RECQL 5965 12 21515836 NM_032941 NP_116559 A/C K487T minus 6903928 777 SNP500CANCER HISP1 Hispanic (23) 46 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1869 rs6501 RECQL 5965 12 21515836 NM_032941 NP_116559 A/C K487T minus 6903928 778 SNP500CANCER PAC1 Pacific Rim (24) 48 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1870 rs6501 RECQL 5965 12 21515836 NM_032941 NP_116559 A/C K487T minus 6903928 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1871 rs6501 RECQL 5965 12 21515836 NM_032941 NP_116559 A/C K487T minus 23349845 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1872 rs6501 RECQL 5965 12 21515836 NM_032941 NP_116559 A/C K487T minus 23349845 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1873 rs6501 RECQL 5965 12 21515836 NM_032941 NP_116559 A/C K487T minus 23349845 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 12p12 RecQ protein-like (DNA helicase Q1-like) 1874 rs6504 P11 8909 12 46398209 NM_006025 NP_006016 C/G E31Q minus 8161 507 WIAF-CSNP WIAF-CSNP-MITOGPOP2 European (10) and African American (10) 36 0.1 52 by freq 12q13.1 26 serine protease 1875 rs6505 P11 8909 12 46398208 NM_006025 NP_006016 A/T E31V minus 8162 507 WIAF-CSNP WIAF-CSNP-MITOGPOP2 European (10) and African American (10) 36 0.1 52 by freq 12q13.1 26 serine protease 1876 rs6508 WIT-1 51352 11 32417040 NM_015855 NP_056939 A/G A13T plus 8166 507 WIAF-CSNP WIAF-CSNP-MITOGPOP2 European (10) and African American (10) 34 0.1 123 "by cluster,freq" 11p13 Wilms tumor associated protein 1877 rs6508 WIT-1 51352 11 32417040 NM_015855 NP_056939 A/G A13T plus 17430401 1303 SEQUENOM CEPH CEPH (92) 92 0.02 123 "by cluster,freq" 11p13 Wilms tumor associated protein 1878 rs6508 WIT-1 51352 11 32417040 NM_015855 NP_056939 A/G A13T plus 23494328 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.09 123 "by cluster,freq" 11p13 Wilms tumor associated protein 1879 rs6508 WIT-1 51352 11 32417040 NM_015855 NP_056939 A/G A13T plus 23494328 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.41 123 "by cluster,freq" 11p13 Wilms tumor associated protein 1880 rs6508 WIT-1 51352 11 32417040 NM_015855 NP_056939 A/G A13T plus 23494328 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 11p13 Wilms tumor associated protein 1881 rs6510 SPAG1 6674 8 101322005 NM_003114 NP_003105 C/T H827Y plus 8170 508 WIAF-CSNP WIAF-CSNP-MITOGPOP1 "Europeans (20), Asians (10) and African-Americans (10)" 36 0.1 52 HapMap 8q22.2 sperm associated antigen 1 1882 rs6510 SPAG1 6674 8 101322005 NM_003114 NP_003105 C/T H827Y plus 8170 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 8q22.2 sperm associated antigen 1 1883 rs6510 SPAG1 6674 8 101322005 NM_003114 NP_003105 C/T H827Y plus 8170 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 8q22.2 sperm associated antigen 1 1884 rs6510 SPAG1 6674 8 101322005 NM_172218 NP_757367 C/T H827Y plus 8170 508 WIAF-CSNP WIAF-CSNP-MITOGPOP1 "Europeans (20), Asians (10) and African-Americans (10)" 36 0.1 52 HapMap 8q22.2 sperm associated antigen 1 1885 rs6510 SPAG1 6674 8 101322005 NM_172218 NP_757367 C/T H827Y plus 8170 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 52 HapMap 8q22.2 sperm associated antigen 1 1886 rs6510 SPAG1 6674 8 101322005 NM_172218 NP_757367 C/T H827Y plus 8170 1303 SEQUENOM CEPH CEPH (92) 92 1 52 HapMap 8q22.2 sperm associated antigen 1 1887 rs6511 SPAG1 6674 8 101321856 NM_003114 NP_003105 C/T M777T plus 8171 508 WIAF-CSNP WIAF-CSNP-MITOGPOP1 "Europeans (20), Asians (10) and African-Americans (10)" 36 0.33 123 "HapMap,doubleHit,freq,cluster" 8q22.2 sperm associated antigen 1 1888 rs6511 SPAG1 6674 8 101321856 NM_003114 NP_003105 C/T M777T plus 2964004 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.42 123 "HapMap,doubleHit,freq,cluster" 8q22.2 sperm associated antigen 1 1889 rs6511 SPAG1 6674 8 101321856 NM_003114 NP_003105 C/T M777T plus 2964004 1303 SEQUENOM CEPH CEPH (92) 92 0.48 123 "HapMap,doubleHit,freq,cluster" 8q22.2 sperm associated antigen 1 1890 rs6511 SPAG1 6674 8 101321856 NM_003114 NP_003105 C/T M777T plus 3243620 738 YUSUKE JBIC-ALLELE Japanese (752) 1484 0.49 123 "HapMap,doubleHit,freq,cluster" 8q22.2 sperm associated antigen 1 1891 rs6511 SPAG1 6674 8 101321856 NM_003114 NP_003105 C/T M777T plus 23996181 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.25 123 "HapMap,doubleHit,freq,cluster" 8q22.2 sperm associated antigen 1 1892 rs6511 SPAG1 6674 8 101321856 NM_003114 NP_003105 C/T M777T plus 23996181 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.18 123 "HapMap,doubleHit,freq,cluster" 8q22.2 sperm associated antigen 1 1893 rs6511 SPAG1 6674 8 101321856 NM_003114 NP_003105 C/T M777T plus 23996181 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.44 123 "HapMap,doubleHit,freq,cluster" 8q22.2 sperm associated antigen 1 1894 rs6511 SPAG1 6674 8 101321856 NM_172218 NP_757367 C/T M777T plus 8171 508 WIAF-CSNP WIAF-CSNP-MITOGPOP1 "Europeans (20), Asians (10) and African-Americans (10)" 36 0.33 123 "HapMap,doubleHit,freq,cluster" 8q22.2 sperm associated antigen 1 1895 rs6511 SPAG1 6674 8 101321856 NM_172218 NP_757367 C/T M777T plus 2964004 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.42 123 "HapMap,doubleHit,freq,cluster" 8q22.2 sperm associated antigen 1 1896 rs6511 SPAG1 6674 8 101321856 NM_172218 NP_757367 C/T M777T plus 2964004 1303 SEQUENOM CEPH CEPH (92) 92 0.48 123 "HapMap,doubleHit,freq,cluster" 8q22.2 sperm associated antigen 1 1897 rs6511 SPAG1 6674 8 101321856 NM_172218 NP_757367 C/T M777T plus 3243620 738 YUSUKE JBIC-ALLELE Japanese (752) 1484 0.49 123 "HapMap,doubleHit,freq,cluster" 8q22.2 sperm associated antigen 1 1898 rs6511 SPAG1 6674 8 101321856 NM_172218 NP_757367 C/T M777T plus 23996181 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.25 123 "HapMap,doubleHit,freq,cluster" 8q22.2 sperm associated antigen 1 1899 rs6511 SPAG1 6674 8 101321856 NM_172218 NP_757367 C/T M777T plus 23996181 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.18 123 "HapMap,doubleHit,freq,cluster" 8q22.2 sperm associated antigen 1 1900 rs6511 SPAG1 6674 8 101321856 NM_172218 NP_757367 C/T M777T plus 23996181 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.44 123 "HapMap,doubleHit,freq,cluster" 8q22.2 sperm associated antigen 1 1901 rs6525 BMP8A 353500 1 39657177 NM_181809 NP_861525 A/G R293H plus 8185 508 WIAF-CSNP WIAF-CSNP-MITOGPOP1 "Europeans (20), Asians (10) and African-Americans (10)" 38 0.33 121 "by doubleHit,freq,cluster" 1p34.2 bone morphogenetic protein 8a 1902 rs6525 BMP8A 353500 1 39657177 NM_181809 NP_861525 A/G R293H plus 17934 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.31 121 "by doubleHit,freq,cluster" 1p34.2 bone morphogenetic protein 8a 1903 rs6525 BMP8A 353500 1 39657177 NM_181809 NP_861525 A/G R293H plus 20433475 1303 SEQUENOM CEPH CEPH (92) 92 0.31 121 "by doubleHit,freq,cluster" 1p34.2 bone morphogenetic protein 8a 1904 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 545447 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.33 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1905 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 545447 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 22 0.32 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1906 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 545447 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 20 0.15 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1907 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 545447 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 92 0.28 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1908 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 1412171 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.28 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1909 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 1412171 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.25 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1910 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 1412171 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.32 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1911 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 1412171 901 AFFY AfAm 12 0.25 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1912 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 1412171 902 AFFY Caucasian 24 0.38 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1913 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 1412171 903 AFFY Asian 12 0.25 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1914 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 1412171 904 AFFY CEPH 12 0.33 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1915 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 1412171 905 AFFY PDpanel 46 0.24 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1916 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 1412171 1303 SEQUENOM CEPH CEPH (92) 92 0.48 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1917 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 4474558 738 YUSUKE JBIC-ALLELE Japanese (752) 1466 0.32 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1918 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 24652496 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.38 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1919 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 24652496 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.3 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1920 rs6574 MPHOSPH10 10199 2 71288654 NM_005791 NP_005782 C/T E634K minus 24652496 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "by doubleHit,freq,cluster" 2p13.2 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 1921 rs6577 GSTA2 2939 6 52723374 NM_000846 NP_000837 A/C E210A minus 869782 506 NCBI NIHPDR NIHPDR 78 0.29 120 "by doubleHit,submitter,freq,cluster" 6p12.1 glutathione S-transferase A2 1922 rs6577 GSTA2 2939 6 52723374 NM_000846 NP_000837 A/C E210A minus 3671245 1303 SEQUENOM CEPH CEPH (92) 92 0.08 120 "by doubleHit,submitter,freq,cluster" 6p12.1 glutathione S-transferase A2 1923 rs6647 SERPINA1 5265 14 93917168 NM_000295 NP_000286 C/T V237A minus 20192 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 38 0.33 123 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 1924 rs6647 SERPINA1 5265 14 93917168 NM_000295 NP_000286 C/T V237A minus 1875346 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 1925 rs6647 SERPINA1 5265 14 93917168 NM_000295 NP_000286 C/T V237A minus 23648078 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 1926 rs6647 SERPINA1 5265 14 93917168 NM_000295 NP_000286 C/T V237A minus 23648078 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 1927 rs6647 SERPINA1 5265 14 93917168 NM_000295 NP_000286 C/T V237A minus 23648078 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.06 123 "by doubleHit,freq,cluster" 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 1928 rs6753 NOL5A 10528 20 2586579 NM_006392 NP_006383 C/T M475T plus 3208481 738 YUSUKE JBIC-ALLELE Japanese (752) 1498 0.24 108 "by cluster,freq" 20p13 nucleolar protein 5A (56kDa with KKE/D repeat) 1929 rs6791 STXBP2 6813 19 7618277 NM_006949 NP_008880 A/G I526V plus 8516 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.26 123 "by doubleHit,freq,cluster" 19p13.3-p13.2 syntaxin binding protein 2 1930 rs6791 STXBP2 6813 19 7618277 NM_006949 NP_008880 A/G I526V plus 1414714 1303 SEQUENOM CEPH CEPH (92) 92 0.26 123 "by doubleHit,freq,cluster" 19p13.3-p13.2 syntaxin binding protein 2 1931 rs6791 STXBP2 6813 19 7618277 NM_006949 NP_008880 A/G I526V plus 24417641 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.39 123 "by doubleHit,freq,cluster" 19p13.3-p13.2 syntaxin binding protein 2 1932 rs6791 STXBP2 6813 19 7618277 NM_006949 NP_008880 A/G I526V plus 24417641 1372 PERLEGEN AFD_AFR_PANEL African American (24) 40 0.15 123 "by doubleHit,freq,cluster" 19p13.3-p13.2 syntaxin binding protein 2 1933 rs6791 STXBP2 6813 19 7618277 NM_006949 NP_008880 A/G I526V plus 24417641 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.21 123 "by doubleHit,freq,cluster" 19p13.3-p13.2 syntaxin binding protein 2 1934 rs6794 EXOSC7 23016 3 45027779 NM_015004 NP_055819 C/G V274L plus 8519 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.5 120 "HapMap,doubleHit,freq,cluster" 3p21.32 exosome component 7 1935 rs6794 EXOSC7 23016 3 45027779 NM_015004 NP_055819 C/G V274L plus 3218463 738 YUSUKE JBIC-ALLELE Japanese (752) 1474 0.12 120 "HapMap,doubleHit,freq,cluster" 3p21.32 exosome component 7 1936 rs6794 EXOSC7 23016 3 45027779 NM_015004 NP_055819 C/G V274L plus 10058733 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.48 120 "HapMap,doubleHit,freq,cluster" 3p21.32 exosome component 7 1937 rs6794 EXOSC7 23016 3 45027779 NM_015004 NP_055819 C/G V274L plus 10058733 1303 SEQUENOM CEPH CEPH (92) 46 0.5 120 "HapMap,doubleHit,freq,cluster" 3p21.32 exosome component 7 1938 rs6834 KARS 3735 16 74219304 NM_005548 NP_005539 C/G T595S minus 8568 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.33 120 "HapMap,doubleHit,freq,cluster" 16q23-q24 lysyl-tRNA synthetase 1939 rs6834 KARS 3735 16 74219304 NM_005548 NP_005539 C/G T595S minus 8568 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 120 "HapMap,doubleHit,freq,cluster" 16q23-q24 lysyl-tRNA synthetase 1940 rs6834 KARS 3735 16 74219304 NM_005548 NP_005539 C/G T595S minus 8568 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 120 "HapMap,doubleHit,freq,cluster" 16q23-q24 lysyl-tRNA synthetase 1941 rs6834 KARS 3735 16 74219304 NM_005548 NP_005539 C/G T595S minus 12357600 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.05 120 "HapMap,doubleHit,freq,cluster" 16q23-q24 lysyl-tRNA synthetase 1942 rs6834 KARS 3735 16 74219304 NM_005548 NP_005539 C/G T595S minus 12357600 1303 SEQUENOM CEPH CEPH (92) 92 0.01 120 "HapMap,doubleHit,freq,cluster" 16q23-q24 lysyl-tRNA synthetase 1943 rs6901 PITRM1 10531 10 3170227 NM_014889 NP_055704 A/G Q1037R minus 8650 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.28 123 "by doubleHit,freq,cluster" 10p15.3 pitrilysin metalloproteinase 1 1944 rs6901 PITRM1 10531 10 3170227 NM_014889 NP_055704 A/G Q1037R minus 3253817 738 YUSUKE JBIC-ALLELE Japanese (752) 1480 0.24 123 "by doubleHit,freq,cluster" 10p15.3 pitrilysin metalloproteinase 1 1945 rs6901 PITRM1 10531 10 3170227 NM_014889 NP_055704 A/G Q1037R minus 3349913 638 TSC-CSHL TSC_42_AA TSC African American (42) 60 0.33 123 "by doubleHit,freq,cluster" 10p15.3 pitrilysin metalloproteinase 1 1946 rs6901 PITRM1 10531 10 3170227 NM_014889 NP_055704 A/G Q1037R minus 3349913 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 60 0.33 123 "by doubleHit,freq,cluster" 10p15.3 pitrilysin metalloproteinase 1 1947 rs6901 PITRM1 10531 10 3170227 NM_014889 NP_055704 A/G Q1037R minus 3349913 640 TSC-CSHL TSC_42_A TSC Asian (42) 60 0.27 123 "by doubleHit,freq,cluster" 10p15.3 pitrilysin metalloproteinase 1 1948 rs6901 PITRM1 10531 10 3170227 NM_014889 NP_055704 A/G Q1037R minus 3349913 1303 SEQUENOM CEPH CEPH (92) 93 0.28 123 "by doubleHit,freq,cluster" 10p15.3 pitrilysin metalloproteinase 1 1949 rs6901 PITRM1 10531 10 3170227 NM_014889 NP_055704 A/G Q1037R minus 24294922 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.4 123 "by doubleHit,freq,cluster" 10p15.3 pitrilysin metalloproteinase 1 1950 rs6901 PITRM1 10531 10 3170227 NM_014889 NP_055704 A/G Q1037R minus 24294922 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.33 123 "by doubleHit,freq,cluster" 10p15.3 pitrilysin metalloproteinase 1 1951 rs6901 PITRM1 10531 10 3170227 NM_014889 NP_055704 A/G Q1037R minus 24294922 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.26 123 "by doubleHit,freq,cluster" 10p15.3 pitrilysin metalloproteinase 1 1952 rs6940 IFI16 3428 1 155837741 NM_005531 NP_005522 A/T T723S plus 3127046 1303 SEQUENOM CEPH CEPH (92) 92 0.1 120 "by doubleHit,freq,cluster" 1q22 "interferon, gamma-inducible protein 16" 1953 rs6952 TRAPPC5 126003 19 7653293 XM_058961 XP_058961 A/C S154A minus 3249580 1303 SEQUENOM CEPH CEPH (92) 92 0.04 120 "by doubleHit,freq,cluster" 19p13.3 trafficking protein particle complex 5 1954 rs6962 SDHA 6389 5 309509 NM_004168 NP_004159 A/G V657I plus 14640981 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.13 120 "HapMap,doubleHit,freq,cluster" 5p15 "succinate dehydrogenase complex, subunit A, flavoprotein (Fp)" 1955 rs6962 SDHA 6389 5 309509 NM_004168 NP_004159 A/G V657I plus 14640981 1303 SEQUENOM CEPH CEPH (92) 92 0.03 120 "HapMap,doubleHit,freq,cluster" 5p15 "succinate dehydrogenase complex, subunit A, flavoprotein (Fp)" 1956 rs6971 BZRP 706 22 41883424 NM_000714 NP_000705 C/T T147A minus 8732 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.32 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1957 rs6971 BZRP 706 22 41883424 NM_000714 NP_000705 C/T T147A minus 2893542 768 TSC-CSHL WICGR3_AFRICAN_AMERICAN WICGR African-American (50) 100 0.18 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1958 rs6971 BZRP 706 22 41883424 NM_000714 NP_000705 C/T T147A minus 2893542 769 TSC-CSHL WICGR4_ASIAN WICGR Asian (42) 84 0.07 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1959 rs6971 BZRP 706 22 41883424 NM_000714 NP_000705 C/T T147A minus 2893542 770 TSC-CSHL WICGR5_NIGERIAN WICGR Nigerian (96) 122 0.3 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1960 rs6971 BZRP 706 22 41883424 NM_000714 NP_000705 C/T T147A minus 2893542 780 TSC-CSHL WICGR8_ASIAN_POOLED WICGR Asian (30) 84 0.16 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1961 rs6971 BZRP 706 22 41883424 NM_000714 NP_000705 C/T T147A minus 2893542 782 TSC-CSHL WICGR6_CAUCASIAN_POOLED WICGR Caucasian (48) 96 0.41 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1962 rs6971 BZRP 706 22 41883424 NM_000714 NP_000705 C/T T147A minus 2893542 1303 SEQUENOM CEPH CEPH (92) 92 0.32 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1963 rs6971 BZRP 706 22 41883424 NM_000714 NP_000705 C/T T147A minus 3172724 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 46 0.17 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1964 rs6971 BZRP 706 22 41883424 NM_000714 NP_000705 C/T T147A minus 7986213 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.2 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1965 rs6971 BZRP 706 22 41883424 NM_000714 NP_000705 C/T T147A minus 7986213 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.32 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1966 rs6971 BZRP 706 22 41883424 NM_000714 NP_000705 C/T T147A minus 7986213 776 SNP500CANCER AFR1 African / African-American (24) 48 0.13 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1967 rs6971 BZRP 706 22 41883424 NM_000714 NP_000705 C/T T147A minus 7986213 777 SNP500CANCER HISP1 Hispanic (23) 42 0.24 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1968 rs6971 BZRP 706 22 41883424 NM_000714 NP_000705 C/T T147A minus 7986213 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.06 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1969 rs6971 BZRP 706 22 41883424 NM_000714 NP_000705 C/T T147A minus 12704281 693 EGP_SNPS PDR90 NIHPDR 170 0.19 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1970 rs6971 BZRP 706 22 41883424 NM_007311 NP_009295 C/T H53R minus 8732 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.32 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1971 rs6971 BZRP 706 22 41883424 NM_007311 NP_009295 C/T H53R minus 2893542 768 TSC-CSHL WICGR3_AFRICAN_AMERICAN WICGR African-American (50) 100 0.18 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1972 rs6971 BZRP 706 22 41883424 NM_007311 NP_009295 C/T H53R minus 2893542 769 TSC-CSHL WICGR4_ASIAN WICGR Asian (42) 84 0.07 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1973 rs6971 BZRP 706 22 41883424 NM_007311 NP_009295 C/T H53R minus 2893542 770 TSC-CSHL WICGR5_NIGERIAN WICGR Nigerian (96) 122 0.3 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1974 rs6971 BZRP 706 22 41883424 NM_007311 NP_009295 C/T H53R minus 2893542 780 TSC-CSHL WICGR8_ASIAN_POOLED WICGR Asian (30) 84 0.16 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1975 rs6971 BZRP 706 22 41883424 NM_007311 NP_009295 C/T H53R minus 2893542 782 TSC-CSHL WICGR6_CAUCASIAN_POOLED WICGR Caucasian (48) 96 0.41 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1976 rs6971 BZRP 706 22 41883424 NM_007311 NP_009295 C/T H53R minus 2893542 1303 SEQUENOM CEPH CEPH (92) 92 0.32 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1977 rs6971 BZRP 706 22 41883424 NM_007311 NP_009295 C/T H53R minus 3172724 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 46 0.17 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1978 rs6971 BZRP 706 22 41883424 NM_007311 NP_009295 C/T H53R minus 7986213 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.2 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1979 rs6971 BZRP 706 22 41883424 NM_007311 NP_009295 C/T H53R minus 7986213 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.32 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1980 rs6971 BZRP 706 22 41883424 NM_007311 NP_009295 C/T H53R minus 7986213 776 SNP500CANCER AFR1 African / African-American (24) 48 0.13 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1981 rs6971 BZRP 706 22 41883424 NM_007311 NP_009295 C/T H53R minus 7986213 777 SNP500CANCER HISP1 Hispanic (23) 42 0.24 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1982 rs6971 BZRP 706 22 41883424 NM_007311 NP_009295 C/T H53R minus 7986213 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.06 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1983 rs6971 BZRP 706 22 41883424 NM_007311 NP_009295 C/T H53R minus 12704281 693 EGP_SNPS PDR90 NIHPDR 170 0.19 121 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1984 rs6972 BZRP 706 22 41883470 NM_000714 NP_000705 A/G R162H plus 8733 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.33 120 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1985 rs6972 BZRP 706 22 41883470 NM_000714 NP_000705 A/G R162H plus 86784 768 TSC-CSHL WICGR3_AFRICAN_AMERICAN WICGR African-American (50) 98 0.11 120 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1986 rs6972 BZRP 706 22 41883470 NM_000714 NP_000705 A/G R162H plus 86784 769 TSC-CSHL WICGR4_ASIAN WICGR Asian (42) 84 0.2 120 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1987 rs6972 BZRP 706 22 41883470 NM_000714 NP_000705 A/G R162H plus 86784 770 TSC-CSHL WICGR5_NIGERIAN WICGR Nigerian (96) 130 0.02 120 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1988 rs6972 BZRP 706 22 41883470 NM_000714 NP_000705 A/G R162H plus 3176163 619 WICVAR MITOGPOP6 CORIELL Mixed 34 0.03 120 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1989 rs6972 BZRP 706 22 41883470 NM_000714 NP_000705 A/G R162H plus 5169438 1303 SEQUENOM CEPH CEPH (92) 92 0.33 120 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1990 rs6972 BZRP 706 22 41883470 NM_000714 NP_000705 A/G R162H plus 7986212 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.19 120 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1991 rs6972 BZRP 706 22 41883470 NM_000714 NP_000705 A/G R162H plus 7986212 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.18 120 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1992 rs6972 BZRP 706 22 41883470 NM_000714 NP_000705 A/G R162H plus 7986212 776 SNP500CANCER AFR1 African / African-American (24) 48 0.13 120 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1993 rs6972 BZRP 706 22 41883470 NM_000714 NP_000705 A/G R162H plus 7986212 777 SNP500CANCER HISP1 Hispanic (23) 44 0.16 120 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1994 rs6972 BZRP 706 22 41883470 NM_000714 NP_000705 A/G R162H plus 7986212 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.27 120 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1995 rs6972 BZRP 706 22 41883470 NM_000714 NP_000705 A/G R162H plus 12704282 693 EGP_SNPS PDR90 NIHPDR 170 0.24 120 "by doubleHit,freq,cluster" 22q13.31 benzodiazapine receptor (peripheral) 1996 rs7006 DPCD 25911 10 103358644 NM_015448 NP_056263 A/G L156S minus 8771 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.17 123 "HapMap,doubleHit,submitter,freq,cluster" 10q24.32 deleted in a mouse model of primary ciliary dyskinesia 1997 rs7006 DPCD 25911 10 103358644 NM_015448 NP_056263 A/G L156S minus 4331540 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.29 123 "HapMap,doubleHit,submitter,freq,cluster" 10q24.32 deleted in a mouse model of primary ciliary dyskinesia 1998 rs7006 DPCD 25911 10 103358644 NM_015448 NP_056263 A/G L156S minus 4331540 1303 SEQUENOM CEPH CEPH (92) 92 0.17 123 "HapMap,doubleHit,submitter,freq,cluster" 10q24.32 deleted in a mouse model of primary ciliary dyskinesia 1999 rs7006 DPCD 25911 10 103358644 NM_015448 NP_056263 A/G L156S minus 23499036 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "HapMap,doubleHit,submitter,freq,cluster" 10q24.32 deleted in a mouse model of primary ciliary dyskinesia 2000 rs7006 DPCD 25911 10 103358644 NM_015448 NP_056263 A/G L156S minus 23499036 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 10q24.32 deleted in a mouse model of primary ciliary dyskinesia 2001 rs7006 DPCD 25911 10 103358644 NM_015448 NP_056263 A/G L156S minus 23499036 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.17 123 "HapMap,doubleHit,submitter,freq,cluster" 10q24.32 deleted in a mouse model of primary ciliary dyskinesia 2002 rs7007 MRPL9 65005 1 148548649 NM_031420 NP_113608 A/G E67G minus 8772 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.24 120 "by doubleHit,freq,cluster" 1q21 mitochondrial ribosomal protein L9 2003 rs7007 MRPL9 65005 1 148548649 NM_031420 NP_113608 A/G E67G minus 11355653 1303 SEQUENOM CEPH CEPH (92) 92 0.24 120 "by doubleHit,freq,cluster" 1q21 mitochondrial ribosomal protein L9 2004 rs7011 CINP 51550 14 101884795 NM_032630 NP_116019 C/T R164H plus 8778 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.29 123 "by doubleHit,freq" 14q32.33 cyclin-dependent kinase 2-interacting protein 2005 rs7011 CINP 51550 14 101884795 NM_032630 NP_116019 C/T R164H plus 16240284 1303 SEQUENOM CEPH CEPH (92) 91 0.28 123 "by doubleHit,freq" 14q32.33 cyclin-dependent kinase 2-interacting protein 2006 rs7011 CINP 51550 14 101884795 NM_032630 NP_116019 C/T R164H plus 24576038 1371 PERLEGEN AFD_EUR_PANEL European American (24) 42 0.24 123 "by doubleHit,freq" 14q32.33 cyclin-dependent kinase 2-interacting protein 2007 rs7011 CINP 51550 14 101884795 NM_032630 NP_116019 C/T R164H plus 24576038 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "by doubleHit,freq" 14q32.33 cyclin-dependent kinase 2-interacting protein 2008 rs7011 CINP 51550 14 101884795 NM_032630 NP_116019 C/T R164H plus 24576038 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.02 123 "by doubleHit,freq" 14q32.33 cyclin-dependent kinase 2-interacting protein 2009 rs7041 GC 2638 4 72983369 NM_000583 NP_000574 G/T D432E minus 6903804 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.38 121 "by doubleHit,submitter,freq,cluster" 4q12-q13 group-specific component (vitamin D binding protein) 2010 rs7041 GC 2638 4 72983369 NM_000583 NP_000574 G/T D432E minus 6903804 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.42 121 "by doubleHit,submitter,freq,cluster" 4q12-q13 group-specific component (vitamin D binding protein) 2011 rs7041 GC 2638 4 72983369 NM_000583 NP_000574 G/T D432E minus 6903804 776 SNP500CANCER AFR1 African / African-American (24) 48 0.17 121 "by doubleHit,submitter,freq,cluster" 4q12-q13 group-specific component (vitamin D binding protein) 2012 rs7041 GC 2638 4 72983369 NM_000583 NP_000574 G/T D432E minus 6903804 777 SNP500CANCER HISP1 Hispanic (23) 46 0.46 121 "by doubleHit,submitter,freq,cluster" 4q12-q13 group-specific component (vitamin D binding protein) 2013 rs7041 GC 2638 4 72983369 NM_000583 NP_000574 G/T D432E minus 6903804 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.25 121 "by doubleHit,submitter,freq,cluster" 4q12-q13 group-specific component (vitamin D binding protein) 2014 rs7041 GC 2638 4 72983369 NM_000583 NP_000574 G/T D432E minus 6903804 1303 SEQUENOM CEPH CEPH (92) 92 0.47 121 "by doubleHit,submitter,freq,cluster" 4q12-q13 group-specific component (vitamin D binding protein) 2015 rs7041 GC 2638 4 72983369 NM_000583 NP_000574 G/T D432E minus 12587289 928 IBARROSO ELY UK (Ely region of East Anglia) 921 0.41 121 "by doubleHit,submitter,freq,cluster" 4q12-q13 group-specific component (vitamin D binding protein) 2016 rs7050 WBSCR20B 155400 7 74690345 NM_145645 NP_663620 A/G T117I minus 89142 1303 SEQUENOM CEPH CEPH (92) 92 0.22 120 "by doubleHit,freq,cluster" 7q11.23 Williams-Beuren Syndrome critical region protein 20 copy B 2017 rs7127 WAC 51322 10 28945142 NM_016628 NP_057712 A/T T531S minus 8920 1303 SEQUENOM CEPH CEPH (92) 92 0.02 52 by freq 10p12.1 WW domain containing adaptor with coiled-coil 2018 rs7127 WAC 51322 10 28945142 NM_100264 NP_567822 A/T T486S minus 8920 1303 SEQUENOM CEPH CEPH (92) 92 0.02 52 by freq 10p12.1 WW domain containing adaptor with coiled-coil 2019 rs7127 WAC 51322 10 28945142 NM_100486 NP_567823 A/T T428S minus 8920 1303 SEQUENOM CEPH CEPH (92) 92 0.02 52 by freq 10p12.1 WW domain containing adaptor with coiled-coil 2020 rs7163 EBNA1BP2 10969 1 43301629 NM_006824 NP_006815 A/G R223H minus 8964 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.24 123 "by doubleHit,freq" 1p35-p33 EBNA1 binding protein 2 2021 rs7163 EBNA1BP2 10969 1 43301629 NM_006824 NP_006815 A/G R223H minus 1522972 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.05 123 "by doubleHit,freq" 1p35-p33 EBNA1 binding protein 2 2022 rs7163 EBNA1BP2 10969 1 43301629 NM_006824 NP_006815 A/G R223H minus 1522972 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.36 123 "by doubleHit,freq" 1p35-p33 EBNA1 binding protein 2 2023 rs7163 EBNA1BP2 10969 1 43301629 NM_006824 NP_006815 A/G R223H minus 1522972 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 123 "by doubleHit,freq" 1p35-p33 EBNA1 binding protein 2 2024 rs7163 EBNA1BP2 10969 1 43301629 NM_006824 NP_006815 A/G R223H minus 2646112 1303 SEQUENOM CEPH CEPH (92) 92 0.24 123 "by doubleHit,freq" 1p35-p33 EBNA1 binding protein 2 2025 rs7163 EBNA1BP2 10969 1 43301629 NM_006824 NP_006815 A/G R223H minus 24241649 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.23 123 "by doubleHit,freq" 1p35-p33 EBNA1 binding protein 2 2026 rs7163 EBNA1BP2 10969 1 43301629 NM_006824 NP_006815 A/G R223H minus 24241649 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.05 123 "by doubleHit,freq" 1p35-p33 EBNA1 binding protein 2 2027 rs7163 EBNA1BP2 10969 1 43301629 NM_006824 NP_006815 A/G R223H minus 24241649 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.02 123 "by doubleHit,freq" 1p35-p33 EBNA1 binding protein 2 2028 rs7185 FARSLB 10056 2 223262112 NM_005687 NP_005678 C/T V585I plus 4955031 738 YUSUKE JBIC-ALLELE Japanese (752) 1458 0.02 123 "by doubleHit,submitter,freq,cluster" 2q36.1-q36.2 "phenylalanine-tRNA synthetase-like, beta subunit" 2029 rs7185 FARSLB 10056 2 223262112 NM_005687 NP_005678 C/T V585I plus 14504693 1303 SEQUENOM CEPH CEPH (92) 92 0.07 123 "by doubleHit,submitter,freq,cluster" 2q36.1-q36.2 "phenylalanine-tRNA synthetase-like, beta subunit" 2030 rs7185 FARSLB 10056 2 223262112 NM_005687 NP_005678 C/T V585I plus 23326076 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.13 123 "by doubleHit,submitter,freq,cluster" 2q36.1-q36.2 "phenylalanine-tRNA synthetase-like, beta subunit" 2031 rs7185 FARSLB 10056 2 223262112 NM_005687 NP_005678 C/T V585I plus 23326076 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.24 123 "by doubleHit,submitter,freq,cluster" 2q36.1-q36.2 "phenylalanine-tRNA synthetase-like, beta subunit" 2032 rs7185 FARSLB 10056 2 223262112 NM_005687 NP_005678 C/T V585I plus 23326076 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.02 123 "by doubleHit,submitter,freq,cluster" 2q36.1-q36.2 "phenylalanine-tRNA synthetase-like, beta subunit" 2033 rs7192 HLA-DRA 3122 6 32519624 NM_019111 NP_061984 G/T L242V plus 9003 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.33 123 "by doubleHit,submitter,freq,cluster" 6p21.3 "major histocompatibility complex, class II, DR alpha" 2034 rs7192 HLA-DRA 3122 6 32519624 NM_019111 NP_061984 G/T L242V plus 3195187 738 YUSUKE JBIC-ALLELE Japanese (752) 1494 0.36 123 "by doubleHit,submitter,freq,cluster" 6p21.3 "major histocompatibility complex, class II, DR alpha" 2035 rs7192 HLA-DRA 3122 6 32519624 NM_019111 NP_061984 G/T L242V plus 23716035 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.31 123 "by doubleHit,submitter,freq,cluster" 6p21.3 "major histocompatibility complex, class II, DR alpha" 2036 rs7192 HLA-DRA 3122 6 32519624 NM_019111 NP_061984 G/T L242V plus 23716035 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.43 123 "by doubleHit,submitter,freq,cluster" 6p21.3 "major histocompatibility complex, class II, DR alpha" 2037 rs7192 HLA-DRA 3122 6 32519624 NM_019111 NP_061984 G/T L242V plus 23716035 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.33 123 "by doubleHit,submitter,freq,cluster" 6p21.3 "major histocompatibility complex, class II, DR alpha" 2038 rs7192 HLA-DRA 3122 6 32519624 NM_019111 NP_061984 G/T L242V plus 24796292 1303 SEQUENOM CEPH CEPH (92) 184 0.22 123 "by doubleHit,submitter,freq,cluster" 6p21.3 "major histocompatibility complex, class II, DR alpha" 2039 rs7192 HLA-DRA 3122 6 32519625 NM_019111 NP_061984 G/T L242V plus 9003 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.33 123 "by doubleHit,submitter,freq,cluster" 6p21.3 "major histocompatibility complex, class II, DR alpha" 2040 rs7192 HLA-DRA 3122 6 32519625 NM_019111 NP_061984 G/T L242V plus 3195187 738 YUSUKE JBIC-ALLELE Japanese (752) 1494 0.36 123 "by doubleHit,submitter,freq,cluster" 6p21.3 "major histocompatibility complex, class II, DR alpha" 2041 rs7192 HLA-DRA 3122 6 32519625 NM_019111 NP_061984 G/T L242V plus 23716035 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.31 123 "by doubleHit,submitter,freq,cluster" 6p21.3 "major histocompatibility complex, class II, DR alpha" 2042 rs7192 HLA-DRA 3122 6 32519625 NM_019111 NP_061984 G/T L242V plus 23716035 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.43 123 "by doubleHit,submitter,freq,cluster" 6p21.3 "major histocompatibility complex, class II, DR alpha" 2043 rs7192 HLA-DRA 3122 6 32519625 NM_019111 NP_061984 G/T L242V plus 23716035 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.33 123 "by doubleHit,submitter,freq,cluster" 6p21.3 "major histocompatibility complex, class II, DR alpha" 2044 rs7192 HLA-DRA 3122 6 32519625 NM_019111 NP_061984 G/T L242V plus 24796292 1303 SEQUENOM CEPH CEPH (92) 184 0.22 123 "by doubleHit,submitter,freq,cluster" 6p21.3 "major histocompatibility complex, class II, DR alpha" 2045 rs7251 IRF3 3661 19 54854721 NM_001571 NP_001562 C/G S427T minus 9071 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.31 123 "by doubleHit,freq,cluster" 19q13.3-q13.4 interferon regulatory factor 3 2046 rs7251 IRF3 3661 19 54854721 NM_001571 NP_001562 C/G S427T minus 1321615 1303 SEQUENOM CEPH CEPH (92) 92 0.31 123 "by doubleHit,freq,cluster" 19q13.3-q13.4 interferon regulatory factor 3 2047 rs7251 IRF3 3661 19 54854721 NM_001571 NP_001562 C/G S427T minus 3177824 619 WICVAR MITOGPOP6 CORIELL Mixed 62 0.42 123 "by doubleHit,freq,cluster" 19q13.3-q13.4 interferon regulatory factor 3 2048 rs7313 CPVL 54504 7 28843449 NM_019029 NP_061902 C/T A435V minus 1470842 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.43 123 "HapMap,doubleHit,submitter,freq,cluster" 7p15-p14 "carboxypeptidase, vitellogenic-like" 2049 rs7313 CPVL 54504 7 28843449 NM_019029 NP_061902 C/T A435V minus 1470842 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.49 123 "HapMap,doubleHit,submitter,freq,cluster" 7p15-p14 "carboxypeptidase, vitellogenic-like" 2050 rs7313 CPVL 54504 7 28843449 NM_019029 NP_061902 C/T A435V minus 24489722 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 7p15-p14 "carboxypeptidase, vitellogenic-like" 2051 rs7313 CPVL 54504 7 28843449 NM_019029 NP_061902 C/T A435V minus 24489722 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.26 123 "HapMap,doubleHit,submitter,freq,cluster" 7p15-p14 "carboxypeptidase, vitellogenic-like" 2052 rs7313 CPVL 54504 7 28843449 NM_019029 NP_061902 C/T A435V minus 24489722 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.08 123 "HapMap,doubleHit,submitter,freq,cluster" 7p15-p14 "carboxypeptidase, vitellogenic-like" 2053 rs7313 CPVL 54504 7 28843449 NM_031311 NP_112601 C/T A435V minus 1470842 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.43 123 "HapMap,doubleHit,submitter,freq,cluster" 7p15-p14 "carboxypeptidase, vitellogenic-like" 2054 rs7313 CPVL 54504 7 28843449 NM_031311 NP_112601 C/T A435V minus 1470842 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.49 123 "HapMap,doubleHit,submitter,freq,cluster" 7p15-p14 "carboxypeptidase, vitellogenic-like" 2055 rs7313 CPVL 54504 7 28843449 NM_031311 NP_112601 C/T A435V minus 24489722 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 7p15-p14 "carboxypeptidase, vitellogenic-like" 2056 rs7313 CPVL 54504 7 28843449 NM_031311 NP_112601 C/T A435V minus 24489722 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.26 123 "HapMap,doubleHit,submitter,freq,cluster" 7p15-p14 "carboxypeptidase, vitellogenic-like" 2057 rs7313 CPVL 54504 7 28843449 NM_031311 NP_112601 C/T A435V minus 24489722 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.08 123 "HapMap,doubleHit,submitter,freq,cluster" 7p15-p14 "carboxypeptidase, vitellogenic-like" 2058 rs7412 APOE 348 19 50103919 NM_000041 NP_000032 C/T R176C plus 870165 563 DEBNICK MDECODE-1 European-Americans 48 0.19 120 "by doubleHit,freq,cluster" 19q13.2 apolipoprotein E 2059 rs7412 APOE 348 19 50103919 NM_000041 NP_000032 C/T R176C plus 870165 564 DEBNICK MDECODE-2 Finnish 48 0.04 120 "by doubleHit,freq,cluster" 19q13.2 apolipoprotein E 2060 rs7412 APOE 348 19 50103919 NM_000041 NP_000032 C/T R176C plus 870165 565 DEBNICK MDECODE-3 African-American 48 0.04 120 "by doubleHit,freq,cluster" 19q13.2 apolipoprotein E 2061 rs7412 APOE 348 19 50103919 NM_000041 NP_000032 C/T R176C plus 870165 566 DEBNICK MDECODE-4 Mayan Amerindians from Mexico 48 1 120 "by doubleHit,freq,cluster" 19q13.2 apolipoprotein E 2062 rs7412 APOE 348 19 50103919 NM_000041 NP_000032 C/T R176C plus 12568612 887 CUORCGL AMERICAN CAUCASIANS American Caucasians 1782 0.09 120 "by doubleHit,freq,cluster" 19q13.2 apolipoprotein E 2063 rs7412 APOE 348 19 50103919 NM_000041 NP_000032 C/T R176C plus 15840556 1303 SEQUENOM CEPH CEPH (92) 92 0.28 120 "by doubleHit,freq,cluster" 19q13.2 apolipoprotein E 2064 rs7483 GSTM3 2947 1 109991743 NM_000849 NP_000840 A/G V224I minus 9353 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.26 123 "by doubleHit,freq,cluster" 1p13.3 glutathione S-transferase M3 (brain) 2065 rs7483 GSTM3 2947 1 109991743 NM_000849 NP_000840 A/G V224I minus 2378699 1303 SEQUENOM CEPH CEPH (92) 92 0.26 123 "by doubleHit,freq,cluster" 1p13.3 glutathione S-transferase M3 (brain) 2066 rs7483 GSTM3 2947 1 109991743 NM_000849 NP_000840 A/G V224I minus 3172582 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 68 0.41 123 "by doubleHit,freq,cluster" 1p13.3 glutathione S-transferase M3 (brain) 2067 rs7483 GSTM3 2947 1 109991743 NM_000849 NP_000840 A/G V224I minus 6903821 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.43 123 "by doubleHit,freq,cluster" 1p13.3 glutathione S-transferase M3 (brain) 2068 rs7483 GSTM3 2947 1 109991743 NM_000849 NP_000840 A/G V224I minus 6903821 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.34 123 "by doubleHit,freq,cluster" 1p13.3 glutathione S-transferase M3 (brain) 2069 rs7483 GSTM3 2947 1 109991743 NM_000849 NP_000840 A/G V224I minus 6903821 776 SNP500CANCER AFR1 African / African-American (24) 48 0.25 123 "by doubleHit,freq,cluster" 1p13.3 glutathione S-transferase M3 (brain) 2070 rs7483 GSTM3 2947 1 109991743 NM_000849 NP_000840 A/G V224I minus 6903821 777 SNP500CANCER HISP1 Hispanic (23) 44 0.36 123 "by doubleHit,freq,cluster" 1p13.3 glutathione S-transferase M3 (brain) 2071 rs7483 GSTM3 2947 1 109991743 NM_000849 NP_000840 A/G V224I minus 6903821 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.21 123 "by doubleHit,freq,cluster" 1p13.3 glutathione S-transferase M3 (brain) 2072 rs7483 GSTM3 2947 1 109991743 NM_000849 NP_000840 A/G V224I minus 23868204 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "by doubleHit,freq,cluster" 1p13.3 glutathione S-transferase M3 (brain) 2073 rs7483 GSTM3 2947 1 109991743 NM_000849 NP_000840 A/G V224I minus 23868204 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "by doubleHit,freq,cluster" 1p13.3 glutathione S-transferase M3 (brain) 2074 rs7483 GSTM3 2947 1 109991743 NM_000849 NP_000840 A/G V224I minus 23868204 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.31 123 "by doubleHit,freq,cluster" 1p13.3 glutathione S-transferase M3 (brain) 2075 rs7535 SRP14 6727 15 38115867 NM_003134 NP_003125 C/G P124A minus 3177688 619 WICVAR MITOGPOP6 CORIELL Mixed 44 0.23 121 "HapMap,doubleHit,freq,cluster" 15q22 signal recognition particle 14kDa (homologous Alu RNA binding protein) 2076 rs7535 SRP14 6727 15 38115867 NM_003134 NP_003125 C/G P124A minus 3254847 738 YUSUKE JBIC-ALLELE Japanese (752) 1482 0.28 121 "HapMap,doubleHit,freq,cluster" 15q22 signal recognition particle 14kDa (homologous Alu RNA binding protein) 2077 rs7535 SRP14 6727 15 38115867 NM_003134 NP_003125 C/G P124A minus 4092989 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.04 121 "HapMap,doubleHit,freq,cluster" 15q22 signal recognition particle 14kDa (homologous Alu RNA binding protein) 2078 rs7535 SRP14 6727 15 38115867 NM_003134 NP_003125 C/G P124A minus 4092989 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "HapMap,doubleHit,freq,cluster" 15q22 signal recognition particle 14kDa (homologous Alu RNA binding protein) 2079 rs7539 YAP 55249 1 152442556 NM_018253 NP_060723 C/G E729Q minus 1515501 901 AFFY AfAm 12 0.08 123 "by submitter,freq" 1q22 YY1 associated protein 2080 rs7539 YAP 55249 1 152442556 NM_018253 NP_060723 C/G E729Q minus 1515501 902 AFFY Caucasian 24 1 123 "by submitter,freq" 1q22 YY1 associated protein 2081 rs7539 YAP 55249 1 152442556 NM_018253 NP_060723 C/G E729Q minus 1515501 903 AFFY Asian 12 1 123 "by submitter,freq" 1q22 YY1 associated protein 2082 rs7539 YAP 55249 1 152442556 NM_018253 NP_060723 C/G E729Q minus 1515501 904 AFFY CEPH 12 1 123 "by submitter,freq" 1q22 YY1 associated protein 2083 rs7539 YAP 55249 1 152442556 NM_018253 NP_060723 C/G E729Q minus 1515501 905 AFFY PDpanel 42 0.05 123 "by submitter,freq" 1q22 YY1 associated protein 2084 rs7539 YAP 55249 1 152442556 NM_018253 NP_060723 C/G E729Q minus 1515501 1303 SEQUENOM CEPH CEPH (92) 92 0.03 123 "by submitter,freq" 1q22 YY1 associated protein 2085 rs7539 YAP 55249 1 152442556 NM_018253 NP_060723 C/G E729Q minus 24239344 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "by submitter,freq" 1q22 YY1 associated protein 2086 rs7539 YAP 55249 1 152442556 NM_018253 NP_060723 C/G E729Q minus 24239344 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "by submitter,freq" 1q22 YY1 associated protein 2087 rs7539 YAP 55249 1 152442556 NM_018253 NP_060723 C/G E729Q minus 24239344 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by submitter,freq" 1q22 YY1 associated protein 2088 rs7539 YAP 55249 1 152442556 NM_139118 NP_620829 C/G E786Q minus 1515501 901 AFFY AfAm 12 0.08 123 "by submitter,freq" 1q22 YY1 associated protein 2089 rs7539 YAP 55249 1 152442556 NM_139118 NP_620829 C/G E786Q minus 1515501 902 AFFY Caucasian 24 1 123 "by submitter,freq" 1q22 YY1 associated protein 2090 rs7539 YAP 55249 1 152442556 NM_139118 NP_620829 C/G E786Q minus 1515501 903 AFFY Asian 12 1 123 "by submitter,freq" 1q22 YY1 associated protein 2091 rs7539 YAP 55249 1 152442556 NM_139118 NP_620829 C/G E786Q minus 1515501 904 AFFY CEPH 12 1 123 "by submitter,freq" 1q22 YY1 associated protein 2092 rs7539 YAP 55249 1 152442556 NM_139118 NP_620829 C/G E786Q minus 1515501 905 AFFY PDpanel 42 0.05 123 "by submitter,freq" 1q22 YY1 associated protein 2093 rs7539 YAP 55249 1 152442556 NM_139118 NP_620829 C/G E786Q minus 1515501 1303 SEQUENOM CEPH CEPH (92) 92 0.03 123 "by submitter,freq" 1q22 YY1 associated protein 2094 rs7539 YAP 55249 1 152442556 NM_139118 NP_620829 C/G E786Q minus 24239344 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "by submitter,freq" 1q22 YY1 associated protein 2095 rs7539 YAP 55249 1 152442556 NM_139118 NP_620829 C/G E786Q minus 24239344 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "by submitter,freq" 1q22 YY1 associated protein 2096 rs7539 YAP 55249 1 152442556 NM_139118 NP_620829 C/G E786Q minus 24239344 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by submitter,freq" 1q22 YY1 associated protein 2097 rs7539 YAP 55249 1 152442556 NM_139119 NP_620830 C/G E740Q minus 1515501 901 AFFY AfAm 12 0.08 123 "by submitter,freq" 1q22 YY1 associated protein 2098 rs7539 YAP 55249 1 152442556 NM_139119 NP_620830 C/G E740Q minus 1515501 902 AFFY Caucasian 24 1 123 "by submitter,freq" 1q22 YY1 associated protein 2099 rs7539 YAP 55249 1 152442556 NM_139119 NP_620830 C/G E740Q minus 1515501 903 AFFY Asian 12 1 123 "by submitter,freq" 1q22 YY1 associated protein 2100 rs7539 YAP 55249 1 152442556 NM_139119 NP_620830 C/G E740Q minus 1515501 904 AFFY CEPH 12 1 123 "by submitter,freq" 1q22 YY1 associated protein 2101 rs7539 YAP 55249 1 152442556 NM_139119 NP_620830 C/G E740Q minus 1515501 905 AFFY PDpanel 42 0.05 123 "by submitter,freq" 1q22 YY1 associated protein 2102 rs7539 YAP 55249 1 152442556 NM_139119 NP_620830 C/G E740Q minus 1515501 1303 SEQUENOM CEPH CEPH (92) 92 0.03 123 "by submitter,freq" 1q22 YY1 associated protein 2103 rs7539 YAP 55249 1 152442556 NM_139119 NP_620830 C/G E740Q minus 24239344 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "by submitter,freq" 1q22 YY1 associated protein 2104 rs7539 YAP 55249 1 152442556 NM_139119 NP_620830 C/G E740Q minus 24239344 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "by submitter,freq" 1q22 YY1 associated protein 2105 rs7539 YAP 55249 1 152442556 NM_139119 NP_620830 C/G E740Q minus 24239344 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by submitter,freq" 1q22 YY1 associated protein 2106 rs7539 YAP 55249 1 152442556 NM_139120 NP_620831 C/G E457Q minus 1515501 901 AFFY AfAm 12 0.08 123 "by submitter,freq" 1q22 YY1 associated protein 2107 rs7539 YAP 55249 1 152442556 NM_139120 NP_620831 C/G E457Q minus 1515501 902 AFFY Caucasian 24 1 123 "by submitter,freq" 1q22 YY1 associated protein 2108 rs7539 YAP 55249 1 152442556 NM_139120 NP_620831 C/G E457Q minus 1515501 903 AFFY Asian 12 1 123 "by submitter,freq" 1q22 YY1 associated protein 2109 rs7539 YAP 55249 1 152442556 NM_139120 NP_620831 C/G E457Q minus 1515501 904 AFFY CEPH 12 1 123 "by submitter,freq" 1q22 YY1 associated protein 2110 rs7539 YAP 55249 1 152442556 NM_139120 NP_620831 C/G E457Q minus 1515501 905 AFFY PDpanel 42 0.05 123 "by submitter,freq" 1q22 YY1 associated protein 2111 rs7539 YAP 55249 1 152442556 NM_139120 NP_620831 C/G E457Q minus 1515501 1303 SEQUENOM CEPH CEPH (92) 92 0.03 123 "by submitter,freq" 1q22 YY1 associated protein 2112 rs7539 YAP 55249 1 152442556 NM_139120 NP_620831 C/G E457Q minus 24239344 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "by submitter,freq" 1q22 YY1 associated protein 2113 rs7539 YAP 55249 1 152442556 NM_139120 NP_620831 C/G E457Q minus 24239344 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "by submitter,freq" 1q22 YY1 associated protein 2114 rs7539 YAP 55249 1 152442556 NM_139120 NP_620831 C/G E457Q minus 24239344 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by submitter,freq" 1q22 YY1 associated protein 2115 rs7539 YAP 55249 1 152442556 NM_139121 NP_620832 C/G E674Q minus 1515501 901 AFFY AfAm 12 0.08 123 "by submitter,freq" 1q22 YY1 associated protein 2116 rs7539 YAP 55249 1 152442556 NM_139121 NP_620832 C/G E674Q minus 1515501 902 AFFY Caucasian 24 1 123 "by submitter,freq" 1q22 YY1 associated protein 2117 rs7539 YAP 55249 1 152442556 NM_139121 NP_620832 C/G E674Q minus 1515501 903 AFFY Asian 12 1 123 "by submitter,freq" 1q22 YY1 associated protein 2118 rs7539 YAP 55249 1 152442556 NM_139121 NP_620832 C/G E674Q minus 1515501 904 AFFY CEPH 12 1 123 "by submitter,freq" 1q22 YY1 associated protein 2119 rs7539 YAP 55249 1 152442556 NM_139121 NP_620832 C/G E674Q minus 1515501 905 AFFY PDpanel 42 0.05 123 "by submitter,freq" 1q22 YY1 associated protein 2120 rs7539 YAP 55249 1 152442556 NM_139121 NP_620832 C/G E674Q minus 1515501 1303 SEQUENOM CEPH CEPH (92) 92 0.03 123 "by submitter,freq" 1q22 YY1 associated protein 2121 rs7539 YAP 55249 1 152442556 NM_139121 NP_620832 C/G E674Q minus 24239344 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "by submitter,freq" 1q22 YY1 associated protein 2122 rs7539 YAP 55249 1 152442556 NM_139121 NP_620832 C/G E674Q minus 24239344 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "by submitter,freq" 1q22 YY1 associated protein 2123 rs7539 YAP 55249 1 152442556 NM_139121 NP_620832 C/G E674Q minus 24239344 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by submitter,freq" 1q22 YY1 associated protein 2124 rs7540 SPATA11 84266 19 6325890 NM_032306 NP_115682 A/G R191Q plus 1548307 1303 SEQUENOM CEPH CEPH (92) 92 0.04 120 by freq 19p13.3 spermatogenesis associated 11 2125 rs7571 ADPRTL1 143 13 23898617 NM_006437 NP_006428 C/G A1656P minus 6903629 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.49 119 "by doubleHit,freq,cluster" 13q11 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 2126 rs7571 ADPRTL1 143 13 23898617 NM_006437 NP_006428 C/G A1656P minus 6903629 775 SNP500CANCER CAUC1 Caucasian (31) 58 0.48 119 "by doubleHit,freq,cluster" 13q11 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 2127 rs7571 ADPRTL1 143 13 23898617 NM_006437 NP_006428 C/G A1656P minus 6903629 776 SNP500CANCER AFR1 African / African-American (24) 48 0.4 119 "by doubleHit,freq,cluster" 13q11 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 2128 rs7571 ADPRTL1 143 13 23898617 NM_006437 NP_006428 C/G A1656P minus 6903629 777 SNP500CANCER HISP1 Hispanic (23) 46 0.39 119 "by doubleHit,freq,cluster" 13q11 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 2129 rs7571 ADPRTL1 143 13 23898617 NM_006437 NP_006428 C/G A1656P minus 6903629 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.46 119 "by doubleHit,freq,cluster" 13q11 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 2130 rs7575 MRPL40 64976 22 17797804 NM_003776 NP_003767 A/G R129H plus 9463 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.14 123 "HapMap,doubleHit,submitter,freq,cluster" 22q11.21 mitochondrial ribosomal protein L40 2131 rs7575 MRPL40 64976 22 17797804 NM_003776 NP_003767 A/G R129H plus 12531109 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.17 123 "HapMap,doubleHit,submitter,freq,cluster" 22q11.21 mitochondrial ribosomal protein L40 2132 rs7575 MRPL40 64976 22 17797804 NM_003776 NP_003767 A/G R129H plus 12531109 1303 SEQUENOM CEPH CEPH (92) 92 0.14 123 "HapMap,doubleHit,submitter,freq,cluster" 22q11.21 mitochondrial ribosomal protein L40 2133 rs7575 MRPL40 64976 22 17797804 NM_003776 NP_003767 A/G R129H plus 23788580 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 "HapMap,doubleHit,submitter,freq,cluster" 22q11.21 mitochondrial ribosomal protein L40 2134 rs7575 MRPL40 64976 22 17797804 NM_003776 NP_003767 A/G R129H plus 23788580 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "HapMap,doubleHit,submitter,freq,cluster" 22q11.21 mitochondrial ribosomal protein L40 2135 rs7575 MRPL40 64976 22 17797804 NM_003776 NP_003767 A/G R129H plus 23788580 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.1 123 "HapMap,doubleHit,submitter,freq,cluster" 22q11.21 mitochondrial ribosomal protein L40 2136 rs7775 FRZB 2487 2 183525090 NM_001463 NP_001454 C/G R324G minus 9695 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.1 123 "HapMap,freq,cluster" 2qter frizzled-related protein 2137 rs7775 FRZB 2487 2 183525090 NM_001463 NP_001454 C/G R324G minus 9695 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.04 123 "HapMap,freq,cluster" 2qter frizzled-related protein 2138 rs7775 FRZB 2487 2 183525090 NM_001463 NP_001454 C/G R324G minus 9695 1303 SEQUENOM CEPH CEPH (92) 92 0.1 123 "HapMap,freq,cluster" 2qter frizzled-related protein 2139 rs7775 FRZB 2487 2 183525090 NM_001463 NP_001454 C/G R324G minus 23684639 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.13 123 "HapMap,freq,cluster" 2qter frizzled-related protein 2140 rs7775 FRZB 2487 2 183525090 NM_001463 NP_001454 C/G R324G minus 23684639 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.2 123 "HapMap,freq,cluster" 2qter frizzled-related protein 2141 rs7775 FRZB 2487 2 183525090 NM_001463 NP_001454 C/G R324G minus 23684639 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.02 123 "HapMap,freq,cluster" 2qter frizzled-related protein 2142 rs7799 ELF1 1997 13 40431052 NM_172373 NP_758961 A/G N58S minus 9720 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.32 123 "by doubleHit,submitter,freq,cluster" 13q13 E74-like factor 1 (ets domain transcription factor) 2143 rs7799 ELF1 1997 13 40431052 NM_172373 NP_758961 A/G N58S minus 2934168 1303 SEQUENOM CEPH CEPH (92) 92 0.32 123 "by doubleHit,submitter,freq,cluster" 13q13 E74-like factor 1 (ets domain transcription factor) 2144 rs7813 GEMIN4 50628 17 594936 NM_015721 NP_056536 C/T R1033C minus 9735 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.39 121 "by doubleHit,freq,cluster" 17p13 gem (nuclear organelle) associated protein 4 2145 rs7813 GEMIN4 50628 17 594936 NM_015721 NP_056536 C/T R1033C minus 1345110 1303 SEQUENOM CEPH CEPH (92) 92 0.39 121 "by doubleHit,freq,cluster" 17p13 gem (nuclear organelle) associated protein 4 2146 rs7813 GEMIN4 50628 17 594936 NM_015721 NP_056536 C/T R1033C minus 4930747 738 YUSUKE JBIC-ALLELE Japanese (752) 1492 0.35 121 "by doubleHit,freq,cluster" 17p13 gem (nuclear organelle) associated protein 4 2147 rs7825 OVGP1 5016 1 111669139 NM_002557 NP_002548 C/G E676Q plus 9747 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.4 123 "by doubleHit,submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2148 rs7825 OVGP1 5016 1 111669139 NM_002557 NP_002548 C/G E676Q plus 2620723 1303 SEQUENOM CEPH CEPH (92) 92 0.4 123 "by doubleHit,submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2149 rs7825 OVGP1 5016 1 111669139 NM_002557 NP_002548 C/G E676Q plus 4940070 738 YUSUKE JBIC-ALLELE Japanese (752) 1500 0.22 123 "by doubleHit,submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2150 rs7825 OVGP1 5016 1 111669139 NM_002557 NP_002548 C/G E676Q plus 16333801 901 AFFY AfAm 10 0.4 123 "by doubleHit,submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2151 rs7825 OVGP1 5016 1 111669139 NM_002557 NP_002548 C/G E676Q plus 16333801 902 AFFY Caucasian 24 0.42 123 "by doubleHit,submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2152 rs7825 OVGP1 5016 1 111669139 NM_002557 NP_002548 C/G E676Q plus 16333801 903 AFFY Asian 12 0.17 123 "by doubleHit,submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2153 rs7825 OVGP1 5016 1 111669139 NM_002557 NP_002548 C/G E676Q plus 16333801 904 AFFY CEPH 12 0.08 123 "by doubleHit,submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2154 rs7825 OVGP1 5016 1 111669139 NM_002557 NP_002548 C/G E676Q plus 16333801 905 AFFY PDpanel 23 0.5 123 "by doubleHit,submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2155 rs7825 OVGP1 5016 1 111669139 NM_002557 NP_002548 C/G E676Q plus 24266714 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.44 123 "by doubleHit,submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2156 rs7825 OVGP1 5016 1 111669139 NM_002557 NP_002548 C/G E676Q plus 24266714 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.37 123 "by doubleHit,submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2157 rs7825 OVGP1 5016 1 111669139 NM_002557 NP_002548 C/G E676Q plus 24266714 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.21 123 "by doubleHit,submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2158 rs7887 BAT8 10919 6 31972526 NM_006709 NP_006700 A/C T55N minus 9821 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.46 123 "by cluster,freq" 6p21.31 HLA-B associated transcript 8 2159 rs7887 BAT8 10919 6 31972526 NM_006709 NP_006700 A/C T55N minus 4027163 1303 SEQUENOM CEPH CEPH (92) 92 0.38 123 "by cluster,freq" 6p21.31 HLA-B associated transcript 8 2160 rs7887 BAT8 10919 6 31972526 NM_006709 NP_006700 A/C T55N minus 24789872 1303 SEQUENOM CEPH CEPH (92) 184 0.46 123 "by cluster,freq" 6p21.31 HLA-B associated transcript 8 2161 rs7887 BAT8 10919 6 31972526 NM_006709 NP_006700 A/C T55N minus 24796281 1303 SEQUENOM CEPH CEPH (92) 184 0.46 123 "by cluster,freq" 6p21.31 HLA-B associated transcript 8 2162 rs7887 BAT8 10919 6 31972526 NM_025256 NP_079532 A/C T55N minus 9821 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.46 123 "by cluster,freq" 6p21.31 HLA-B associated transcript 8 2163 rs7887 BAT8 10919 6 31972526 NM_025256 NP_079532 A/C T55N minus 4027163 1303 SEQUENOM CEPH CEPH (92) 92 0.38 123 "by cluster,freq" 6p21.31 HLA-B associated transcript 8 2164 rs7887 BAT8 10919 6 31972526 NM_025256 NP_079532 A/C T55N minus 24789872 1303 SEQUENOM CEPH CEPH (92) 184 0.46 123 "by cluster,freq" 6p21.31 HLA-B associated transcript 8 2165 rs7887 BAT8 10919 6 31972526 NM_025256 NP_079532 A/C T55N minus 24796281 1303 SEQUENOM CEPH CEPH (92) 184 0.46 123 "by cluster,freq" 6p21.31 HLA-B associated transcript 8 2166 rs7946 PEMT 10400 17 17350285 NM_007169 NP_009100 C/T V175M plus 9884 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.24 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2167 rs7946 PEMT 10400 17 17350285 NM_007169 NP_009100 C/T V175M plus 2803970 901 AFFY AfAm 40 0.43 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2168 rs7946 PEMT 10400 17 17350285 NM_007169 NP_009100 C/T V175M plus 2803970 902 AFFY Caucasian 40 0.38 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2169 rs7946 PEMT 10400 17 17350285 NM_007169 NP_009100 C/T V175M plus 2803970 903 AFFY Asian 40 0.15 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2170 rs7946 PEMT 10400 17 17350285 NM_007169 NP_009100 C/T V175M plus 2803970 904 AFFY CEPH 56 0.2 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2171 rs7946 PEMT 10400 17 17350285 NM_007169 NP_009100 C/T V175M plus 2803970 905 AFFY PDpanel 48 0.42 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2172 rs7946 PEMT 10400 17 17350285 NM_007169 NP_009100 C/T V175M plus 2803970 1303 SEQUENOM CEPH CEPH (92) 92 0.24 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2173 rs7946 PEMT 10400 17 17350285 NM_007169 NP_009100 C/T V175M plus 23643161 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.18 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2174 rs7946 PEMT 10400 17 17350285 NM_007169 NP_009100 C/T V175M plus 23643161 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.45 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2175 rs7946 PEMT 10400 17 17350285 NM_007169 NP_009100 C/T V175M plus 23643161 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 40 0.1 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2176 rs7946 PEMT 10400 17 17350285 NM_148172 NP_680477 C/T V212M plus 9884 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.24 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2177 rs7946 PEMT 10400 17 17350285 NM_148172 NP_680477 C/T V212M plus 2803970 901 AFFY AfAm 40 0.43 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2178 rs7946 PEMT 10400 17 17350285 NM_148172 NP_680477 C/T V212M plus 2803970 902 AFFY Caucasian 40 0.38 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2179 rs7946 PEMT 10400 17 17350285 NM_148172 NP_680477 C/T V212M plus 2803970 903 AFFY Asian 40 0.15 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2180 rs7946 PEMT 10400 17 17350285 NM_148172 NP_680477 C/T V212M plus 2803970 904 AFFY CEPH 56 0.2 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2181 rs7946 PEMT 10400 17 17350285 NM_148172 NP_680477 C/T V212M plus 2803970 905 AFFY PDpanel 48 0.42 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2182 rs7946 PEMT 10400 17 17350285 NM_148172 NP_680477 C/T V212M plus 2803970 1303 SEQUENOM CEPH CEPH (92) 92 0.24 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2183 rs7946 PEMT 10400 17 17350285 NM_148172 NP_680477 C/T V212M plus 23643161 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.18 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2184 rs7946 PEMT 10400 17 17350285 NM_148172 NP_680477 C/T V212M plus 23643161 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.45 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2185 rs7946 PEMT 10400 17 17350285 NM_148172 NP_680477 C/T V212M plus 23643161 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 40 0.1 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2186 rs7946 PEMT 10400 17 17350285 NM_148173 NP_680478 C/T V175M plus 9884 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.24 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2187 rs7946 PEMT 10400 17 17350285 NM_148173 NP_680478 C/T V175M plus 2803970 901 AFFY AfAm 40 0.43 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2188 rs7946 PEMT 10400 17 17350285 NM_148173 NP_680478 C/T V175M plus 2803970 902 AFFY Caucasian 40 0.38 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2189 rs7946 PEMT 10400 17 17350285 NM_148173 NP_680478 C/T V175M plus 2803970 903 AFFY Asian 40 0.15 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2190 rs7946 PEMT 10400 17 17350285 NM_148173 NP_680478 C/T V175M plus 2803970 904 AFFY CEPH 56 0.2 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2191 rs7946 PEMT 10400 17 17350285 NM_148173 NP_680478 C/T V175M plus 2803970 905 AFFY PDpanel 48 0.42 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2192 rs7946 PEMT 10400 17 17350285 NM_148173 NP_680478 C/T V175M plus 2803970 1303 SEQUENOM CEPH CEPH (92) 92 0.24 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2193 rs7946 PEMT 10400 17 17350285 NM_148173 NP_680478 C/T V175M plus 23643161 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.18 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2194 rs7946 PEMT 10400 17 17350285 NM_148173 NP_680478 C/T V175M plus 23643161 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.45 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2195 rs7946 PEMT 10400 17 17350285 NM_148173 NP_680478 C/T V175M plus 23643161 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 40 0.1 123 "by doubleHit,freq,cluster" 17p11.2 phosphatidylethanolamine N-methyltransferase 2196 rs8012 GCDH 2639 19 12871520 NM_013976 NP_039663 A/G Q417R plus 9953 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.26 121 "by doubleHit,freq,cluster" 19p13.2 glutaryl-Coenzyme A dehydrogenase 2197 rs8012 GCDH 2639 19 12871520 NM_013976 NP_039663 A/G Q417R plus 17615281 1303 SEQUENOM CEPH CEPH (92) 92 0.26 121 "by doubleHit,freq,cluster" 19p13.2 glutaryl-Coenzyme A dehydrogenase 2198 rs8017 TCEB2 6923 16 2761574 NM_207013 NP_996896 C/T S129N plus 3287771 1303 SEQUENOM CEPH CEPH (92) 46 0.5 123 "by doubleHit,freq,cluster" 16p12.3 "transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B)" 2199 rs8144 ITLN1 55600 1 157659531 NM_017625 NP_060095 C/G R313P plus 16240520 1303 SEQUENOM CEPH CEPH (92) 92 0.06 120 by freq 1q21.3 intelectin 1 (galactofuranose binding) 2200 rs8147 DNAJB11 51726 3 187784405 NM_016306 NP_057390 A/G I264V plus 10096 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.2 120 "HapMap,submitter,freq" 3q28 "DnaJ (Hsp40) homolog, subfamily B, member 11" 2201 rs8147 DNAJB11 51726 3 187784405 NM_016306 NP_057390 A/G I264V plus 1529418 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.17 120 "HapMap,submitter,freq" 3q28 "DnaJ (Hsp40) homolog, subfamily B, member 11" 2202 rs8147 DNAJB11 51726 3 187784405 NM_016306 NP_057390 A/G I264V plus 1529418 1303 SEQUENOM CEPH CEPH (92) 92 0.2 120 "HapMap,submitter,freq" 3q28 "DnaJ (Hsp40) homolog, subfamily B, member 11" 2203 rs8207 PPIG 9360 2 170319370 NM_004792 NP_004783 A/G N699D plus 10166 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.2 121 "HapMap,doubleHit,freq,cluster" 2q31.1 peptidyl-prolyl isomerase G (cyclophilin G) 2204 rs8207 PPIG 9360 2 170319370 NM_004792 NP_004783 A/G N699D plus 10007638 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.22 121 "HapMap,doubleHit,freq,cluster" 2q31.1 peptidyl-prolyl isomerase G (cyclophilin G) 2205 rs8207 PPIG 9360 2 170319370 NM_004792 NP_004783 A/G N699D plus 10007638 1303 SEQUENOM CEPH CEPH (92) 92 0.2 121 "HapMap,doubleHit,freq,cluster" 2q31.1 peptidyl-prolyl isomerase G (cyclophilin G) 2206 rs8286 ACHE 43 7 100135507 NM_000665 NP_000656 A/T V333E minus 10259 1303 SEQUENOM CEPH CEPH (92) 92 0.04 121 by freq 7q22 acetylcholinesterase (YT blood group) 2207 rs8286 ACHE 43 7 100135507 NM_015831 NP_056646 A/T V333E minus 10259 1303 SEQUENOM CEPH CEPH (92) 92 0.04 121 by freq 7q22 acetylcholinesterase (YT blood group) 2208 rs8289 M6PRBP1 10226 19 4810937 NM_005817 NP_005808 A/G I56V minus 10262 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.43 123 "by doubleHit,freq,cluster" 19p13.3 mannose-6-phosphate receptor binding protein 1 2209 rs8289 M6PRBP1 10226 19 4810937 NM_005817 NP_005808 A/G I56V minus 3234695 738 YUSUKE JBIC-ALLELE Japanese (752) 1490 0.4 123 "by doubleHit,freq,cluster" 19p13.3 mannose-6-phosphate receptor binding protein 1 2210 rs8289 M6PRBP1 10226 19 4810937 NM_005817 NP_005808 A/G I56V minus 3747046 1303 SEQUENOM CEPH CEPH (92) 92 0.43 123 "by doubleHit,freq,cluster" 19p13.3 mannose-6-phosphate receptor binding protein 1 2211 rs8289 M6PRBP1 10226 19 4810937 NM_005817 NP_005808 A/G I56V minus 24082489 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.18 123 "by doubleHit,freq,cluster" 19p13.3 mannose-6-phosphate receptor binding protein 1 2212 rs8289 M6PRBP1 10226 19 4810937 NM_005817 NP_005808 A/G I56V minus 24082489 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.37 123 "by doubleHit,freq,cluster" 19p13.3 mannose-6-phosphate receptor binding protein 1 2213 rs8289 M6PRBP1 10226 19 4810937 NM_005817 NP_005808 A/G I56V minus 24082489 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.43 123 "by doubleHit,freq,cluster" 19p13.3 mannose-6-phosphate receptor binding protein 1 2214 rs8305 POLI 11201 18 50074803 NM_007195 NP_009126 A/G A706T plus 4480077 506 NCBI NIHPDR NIHPDR 122 0.26 123 "HapMap,doubleHit,freq,cluster" 18q21.1 polymerase (DNA directed) iota 2215 rs8305 POLI 11201 18 50074803 NM_007195 NP_009126 A/G A706T plus 4916789 693 EGP_SNPS PDR90 NIHPDR 178 0.24 123 "HapMap,doubleHit,freq,cluster" 18q21.1 polymerase (DNA directed) iota 2216 rs8305 POLI 11201 18 50074803 NM_007195 NP_009126 A/G A706T plus 4916789 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.26 123 "HapMap,doubleHit,freq,cluster" 18q21.1 polymerase (DNA directed) iota 2217 rs8305 POLI 11201 18 50074803 NM_007195 NP_009126 A/G A706T plus 4916789 1303 SEQUENOM CEPH CEPH (92) 92 0.38 123 "HapMap,doubleHit,freq,cluster" 18q21.1 polymerase (DNA directed) iota 2218 rs8305 POLI 11201 18 50074803 NM_007195 NP_009126 A/G A706T plus 24531273 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.33 123 "HapMap,doubleHit,freq,cluster" 18q21.1 polymerase (DNA directed) iota 2219 rs8305 POLI 11201 18 50074803 NM_007195 NP_009126 A/G A706T plus 24531273 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "HapMap,doubleHit,freq,cluster" 18q21.1 polymerase (DNA directed) iota 2220 rs8305 POLI 11201 18 50074803 NM_007195 NP_009126 A/G A706T plus 24531273 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.23 123 "HapMap,doubleHit,freq,cluster" 18q21.1 polymerase (DNA directed) iota 2221 rs8337 UBD 10537 6 29631655 NM_006398 NP_006389 C/G C160S minus 10314 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.28 123 "by doubleHit,freq,cluster" 6p21.3 ubiquitin D 2222 rs8337 UBD 10537 6 29631655 NM_006398 NP_006389 C/G C160S minus 24341481 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.23 123 "by doubleHit,freq,cluster" 6p21.3 ubiquitin D 2223 rs8337 UBD 10537 6 29631655 NM_006398 NP_006389 C/G C160S minus 24341481 1372 PERLEGEN AFD_AFR_PANEL African American (24) 36 0.11 123 "by doubleHit,freq,cluster" 6p21.3 ubiquitin D 2224 rs8337 UBD 10537 6 29631655 NM_006398 NP_006389 C/G C160S minus 24341481 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.06 123 "by doubleHit,freq,cluster" 6p21.3 ubiquitin D 2225 rs8337 UBD 10537 6 29631655 NM_006398 NP_006389 C/G C160S minus 24790044 1303 SEQUENOM CEPH CEPH (92) 184 0.28 123 "by doubleHit,freq,cluster" 6p21.3 ubiquitin D 2226 rs8337 UBD 10537 6 29631655 NM_006398 NP_006389 C/G C160S minus 24796241 1303 SEQUENOM CEPH CEPH (92) 184 0.15 123 "by doubleHit,freq,cluster" 6p21.3 ubiquitin D 2227 rs8340 NRPS998 132949 4 57045705 NM_181806 NP_861522 G/T Y1030D minus 10317 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.14 123 "by cluster,freq" 4q12 2-aminoadipic 6-semialdehyde dehydrogenase 2228 rs8340 NRPS998 132949 4 57045705 NM_181806 NP_861522 G/T Y1030D minus 4919320 738 YUSUKE JBIC-ALLELE Japanese (752) 1462 0.19 123 "by cluster,freq" 4q12 2-aminoadipic 6-semialdehyde dehydrogenase 2229 rs8340 NRPS998 132949 4 57045705 NM_181806 NP_861522 G/T Y1030D minus 19599933 1303 SEQUENOM CEPH CEPH (92) 92 0.14 123 "by cluster,freq" 4q12 2-aminoadipic 6-semialdehyde dehydrogenase 2230 rs8340 NRPS998 132949 4 57045705 NM_181806 NP_861522 G/T Y1030D minus 24166651 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.11 123 "by cluster,freq" 4q12 2-aminoadipic 6-semialdehyde dehydrogenase 2231 rs8340 NRPS998 132949 4 57045705 NM_181806 NP_861522 G/T Y1030D minus 24166651 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.24 123 "by cluster,freq" 4q12 2-aminoadipic 6-semialdehyde dehydrogenase 2232 rs8340 NRPS998 132949 4 57045705 NM_181806 NP_861522 G/T Y1030D minus 24166651 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.25 123 "by cluster,freq" 4q12 2-aminoadipic 6-semialdehyde dehydrogenase 2233 rs8451 WINS1 55180 15 98927200 NM_018148 NP_060618 G/T R680S minus 10781777 1303 SEQUENOM CEPH CEPH (92) 92 0.32 123 "by doubleHit,freq,cluster" 15q26.3 WINS1 protein with Drosophila Lines (Lin) homologous domain 2234 rs8451 WINS1 55180 15 98927200 NM_018148 NP_060618 G/T R680S minus 24595382 1371 PERLEGEN AFD_EUR_PANEL European American (24) 38 0.47 123 "by doubleHit,freq,cluster" 15q26.3 WINS1 protein with Drosophila Lines (Lin) homologous domain 2235 rs8451 WINS1 55180 15 98927200 NM_018148 NP_060618 G/T R680S minus 24595382 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.29 123 "by doubleHit,freq,cluster" 15q26.3 WINS1 protein with Drosophila Lines (Lin) homologous domain 2236 rs8451 WINS1 55180 15 98927200 NM_018148 NP_060618 G/T R680S minus 24595382 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.25 123 "by doubleHit,freq,cluster" 15q26.3 WINS1 protein with Drosophila Lines (Lin) homologous domain 2237 rs8455 LXN 56925 3 159871482 NM_020169 NP_064554 C/T H53R plus 14195380 1303 SEQUENOM CEPH CEPH (92) 92 0.45 123 by freq 3q25.32 latexin 2238 rs8455 LXN 56925 3 159871482 NM_020169 NP_064554 C/T H53R plus 24381862 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.35 123 by freq 3q25.32 latexin 2239 rs8455 LXN 56925 3 159871482 NM_020169 NP_064554 C/T H53R plus 24381862 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.28 123 by freq 3q25.32 latexin 2240 rs8455 LXN 56925 3 159871482 NM_020169 NP_064554 C/T H53R plus 24381862 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.19 123 by freq 3q25.32 latexin 2241 rs8473 MKI67 4288 10 129789568 NM_002417 NP_002408 A/G K3217E minus 10462 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 2242 rs8473 MKI67 4288 10 129789568 NM_002417 NP_002408 A/G K3217E minus 2985138 738 YUSUKE JBIC-ALLELE Japanese (752) 1494 0.44 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 2243 rs8473 MKI67 4288 10 129789568 NM_002417 NP_002408 A/G K3217E minus 10624698 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.47 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 2244 rs8473 MKI67 4288 10 129789568 NM_002417 NP_002408 A/G K3217E minus 10624698 1303 SEQUENOM CEPH CEPH (92) 92 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 2245 rs8473 MKI67 4288 10 129789568 NM_002417 NP_002408 A/G K3217E minus 23643988 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.38 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 2246 rs8473 MKI67 4288 10 129789568 NM_002417 NP_002408 A/G K3217E minus 23643988 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 2247 rs8473 MKI67 4288 10 129789568 NM_002417 NP_002408 A/G K3217E minus 23643988 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.31 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 2248 rs8480 MRPL9 65005 1 148546408 NM_031420 NP_113608 A/C E210A minus 16389867 1303 SEQUENOM CEPH CEPH (92) 92 0.41 120 "by doubleHit,submitter,freq,cluster" 1q21 mitochondrial ribosomal protein L9 2249 rs8500 COQ6 51004 14 73498198 NM_182476 NP_872282 C/T V406M minus 10490 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.26 116 "by doubleHit,freq,cluster" 14q24.2 coenzyme Q6 homolog (yeast) 2250 rs8500 COQ6 51004 14 73498198 NM_182476 NP_872282 C/T V406M minus 2989783 738 YUSUKE JBIC-ALLELE Japanese (752) 1484 0.28 116 "by doubleHit,freq,cluster" 14q24.2 coenzyme Q6 homolog (yeast) 2251 rs8500 COQ6 51004 14 73498198 NM_182476 NP_872282 C/T V406M minus 10725291 1303 SEQUENOM CEPH CEPH (92) 92 0.26 116 "by doubleHit,freq,cluster" 14q24.2 coenzyme Q6 homolog (yeast) 2252 rs8500 COQ6 51004 14 73498198 NM_182480 NP_872286 C/T V331M minus 10490 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.26 116 "by doubleHit,freq,cluster" 14q24.2 coenzyme Q6 homolog (yeast) 2253 rs8500 COQ6 51004 14 73498198 NM_182480 NP_872286 C/T V331M minus 2989783 738 YUSUKE JBIC-ALLELE Japanese (752) 1484 0.28 116 "by doubleHit,freq,cluster" 14q24.2 coenzyme Q6 homolog (yeast) 2254 rs8500 COQ6 51004 14 73498198 NM_182480 NP_872286 C/T V331M minus 10725291 1303 SEQUENOM CEPH CEPH (92) 92 0.26 116 "by doubleHit,freq,cluster" 14q24.2 coenzyme Q6 homolog (yeast) 2255 rs8572 OXA1L 5018 14 22306364 NM_005015 NP_005006 A/G A104V minus 1487347 638 TSC-CSHL TSC_42_AA TSC African American (42) 82 0.44 121 "by doubleHit,freq,cluster" 14q11.2 oxidase (cytochrome c) assembly 1-like 2256 rs8572 OXA1L 5018 14 22306364 NM_005015 NP_005006 A/G A104V minus 1487347 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 80 0.2 121 "by doubleHit,freq,cluster" 14q11.2 oxidase (cytochrome c) assembly 1-like 2257 rs8572 OXA1L 5018 14 22306364 NM_005015 NP_005006 A/G A104V minus 1487347 640 TSC-CSHL TSC_42_A TSC Asian (42) 82 0.16 121 "by doubleHit,freq,cluster" 14q11.2 oxidase (cytochrome c) assembly 1-like 2258 rs8572 OXA1L 5018 14 22306364 NM_005015 NP_005006 A/G A104V minus 1487347 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.21 121 "by doubleHit,freq,cluster" 14q11.2 oxidase (cytochrome c) assembly 1-like 2259 rs8572 OXA1L 5018 14 22306364 NM_005015 NP_005006 A/G A104V minus 1487347 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.42 121 "by doubleHit,freq,cluster" 14q11.2 oxidase (cytochrome c) assembly 1-like 2260 rs8572 OXA1L 5018 14 22306364 NM_005015 NP_005006 A/G A104V minus 1487347 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.14 121 "by doubleHit,freq,cluster" 14q11.2 oxidase (cytochrome c) assembly 1-like 2261 rs8572 OXA1L 5018 14 22306364 NM_005015 NP_005006 A/G A104V minus 1487347 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.21 121 "by doubleHit,freq,cluster" 14q11.2 oxidase (cytochrome c) assembly 1-like 2262 rs8572 OXA1L 5018 14 22306364 NM_005015 NP_005006 A/G A104V minus 1487347 1303 SEQUENOM CEPH CEPH (92) 92 0.04 121 "by doubleHit,freq,cluster" 14q11.2 oxidase (cytochrome c) assembly 1-like 2263 rs8572 OXA1L 5018 14 22306364 NM_005015 NP_005006 A/G A104V minus 3173367 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 58 0.1 121 "by doubleHit,freq,cluster" 14q11.2 oxidase (cytochrome c) assembly 1-like 2264 rs8821 FLII 2314 17 18089259 NM_002018 NP_002009 A/G R1243H minus 10850 1303 SEQUENOM CEPH CEPH (92) 92 0.05 120 by freq 17p11.2 flightless I homolog (Drosophila) 2265 rs8875 NDUFC2 4718 11 77468303 NM_004549 NP_004540 C/G L46V plus 793572 1303 SEQUENOM CEPH CEPH (92) 92 0.23 123 by freq 11q13.4 "NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa" 2266 rs8923 MTHFS 10588 15 77924615 NM_006441 NP_006432 A/G T202A minus 10798867 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.08 123 "HapMap,doubleHit,submitter,freq,cluster" 15q24.3 "5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)" 2267 rs8923 MTHFS 10588 15 77924615 NM_006441 NP_006432 A/G T202A minus 10798867 1303 SEQUENOM CEPH CEPH (92) 92 0.06 123 "HapMap,doubleHit,submitter,freq,cluster" 15q24.3 "5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)" 2268 rs8923 MTHFS 10588 15 77924615 NM_006441 NP_006432 A/G T202A minus 24521262 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "HapMap,doubleHit,submitter,freq,cluster" 15q24.3 "5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)" 2269 rs8923 MTHFS 10588 15 77924615 NM_006441 NP_006432 A/G T202A minus 24521262 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "HapMap,doubleHit,submitter,freq,cluster" 15q24.3 "5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)" 2270 rs8923 MTHFS 10588 15 77924615 NM_006441 NP_006432 A/G T202A minus 24521262 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,doubleHit,submitter,freq,cluster" 15q24.3 "5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)" 2271 rs8940 CAV2 858 7 115740025 NM_001233 NP_001224 C/G Q130E plus 10979 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.22 123 "HapMap,freq,cluster" 7q31.1 caveolin 2 2272 rs8940 CAV2 858 7 115740025 NM_001233 NP_001224 C/G Q130E plus 17926461 885 TSC-CSHL HapMap-CEPH-30-trios 112 0.21 123 "HapMap,freq,cluster" 7q31.1 caveolin 2 2273 rs8940 CAV2 858 7 115740025 NM_001233 NP_001224 C/G Q130E plus 17926461 1303 SEQUENOM CEPH CEPH (92) 92 0.22 123 "HapMap,freq,cluster" 7q31.1 caveolin 2 2274 rs8940 CAV2 858 7 115740025 NM_001233 NP_001224 C/G Q130E plus 24464782 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.13 123 "HapMap,freq,cluster" 7q31.1 caveolin 2 2275 rs8940 CAV2 858 7 115740025 NM_001233 NP_001224 C/G Q130E plus 24464782 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.11 123 "HapMap,freq,cluster" 7q31.1 caveolin 2 2276 rs8940 CAV2 858 7 115740025 NM_001233 NP_001224 C/G Q130E plus 24464782 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.02 123 "HapMap,freq,cluster" 7q31.1 caveolin 2 2277 rs8940 CAV2 858 7 115740025 NM_198212 NP_937855 C/G A67G plus 10979 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.22 123 "HapMap,freq,cluster" 7q31.1 caveolin 2 2278 rs8940 CAV2 858 7 115740025 NM_198212 NP_937855 C/G A67G plus 17926461 885 TSC-CSHL HapMap-CEPH-30-trios 112 0.21 123 "HapMap,freq,cluster" 7q31.1 caveolin 2 2279 rs8940 CAV2 858 7 115740025 NM_198212 NP_937855 C/G A67G plus 17926461 1303 SEQUENOM CEPH CEPH (92) 92 0.22 123 "HapMap,freq,cluster" 7q31.1 caveolin 2 2280 rs8940 CAV2 858 7 115740025 NM_198212 NP_937855 C/G A67G plus 24464782 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.13 123 "HapMap,freq,cluster" 7q31.1 caveolin 2 2281 rs8940 CAV2 858 7 115740025 NM_198212 NP_937855 C/G A67G plus 24464782 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.11 123 "HapMap,freq,cluster" 7q31.1 caveolin 2 2282 rs8940 CAV2 858 7 115740025 NM_198212 NP_937855 C/G A67G plus 24464782 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.02 123 "HapMap,freq,cluster" 7q31.1 caveolin 2 2283 rs8971 GART 2618 21 33805488 NM_000819 NP_000810 A/G D752G minus 11013 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.18 123 "by cluster,freq" 21q22.11 "phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase" 2284 rs8971 GART 2618 21 33805488 NM_000819 NP_000810 A/G D752G minus 3224350 738 YUSUKE JBIC-ALLELE Japanese (752) 1492 0.13 123 "by cluster,freq" 21q22.11 "phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase" 2285 rs8971 GART 2618 21 33805488 NM_000819 NP_000810 A/G D752G minus 24546261 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.17 123 "by cluster,freq" 21q22.11 "phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase" 2286 rs8971 GART 2618 21 33805488 NM_000819 NP_000810 A/G D752G minus 24546261 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.08 123 "by cluster,freq" 21q22.11 "phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase" 2287 rs8971 GART 2618 21 33805488 NM_000819 NP_000810 A/G D752G minus 24546261 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.11 123 "by cluster,freq" 21q22.11 "phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase" 2288 rs8971 GART 2618 21 33805488 NM_000819 NP_000810 A/G D752G minus 24796624 1303 SEQUENOM CEPH CEPH (92) 184 0.18 123 "by cluster,freq" 21q22.11 "phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase" 2289 rs8999 TTF1 7270 9 132306895 NM_007344 NP_031370 G/T A290S minus 11043 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.08 120 "HapMap,freq,cluster" 9q34.3 "transcription termination factor, RNA polymerase I" 2290 rs8999 TTF1 7270 9 132306895 NM_007344 NP_031370 G/T A290S minus 11043 1303 SEQUENOM CEPH CEPH (92) 92 0.06 120 "HapMap,freq,cluster" 9q34.3 "transcription termination factor, RNA polymerase I" 2291 rs8999 TTF1 7270 9 132306895 NM_007344 NP_031370 G/T A290S minus 4925916 738 YUSUKE JBIC-ALLELE Japanese (752) 1500 0.26 120 "HapMap,freq,cluster" 9q34.3 "transcription termination factor, RNA polymerase I" 2292 rs9001 CHDH 55349 3 53832957 NM_018397 NP_060867 A/C E40A minus 3213480 738 YUSUKE JBIC-ALLELE Japanese (752) 1292 0.44 123 "HapMap,doubleHit,freq,cluster" 3p21.1 choline dehydrogenase 2293 rs9001 CHDH 55349 3 53832957 NM_018397 NP_060867 A/C E40A minus 11581375 885 TSC-CSHL HapMap-CEPH-30-trios 116 0.03 123 "HapMap,doubleHit,freq,cluster" 3p21.1 choline dehydrogenase 2294 rs9001 CHDH 55349 3 53832957 NM_018397 NP_060867 A/C E40A minus 11581375 1303 SEQUENOM CEPH CEPH (92) 92 0.02 123 "HapMap,doubleHit,freq,cluster" 3p21.1 choline dehydrogenase 2295 rs9002 GPR125 166647 4 22066436 XM_291111 XP_291111 A/G V1043M minus 6469754 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.27 123 "HapMap,doubleHit,freq" 4p15.32-p15.31 G protein-coupled receptor 125 2296 rs9002 GPR125 166647 4 22066436 XM_291111 XP_291111 A/G V1043M minus 6469754 1303 SEQUENOM CEPH CEPH (92) 92 0.02 123 "HapMap,doubleHit,freq" 4p15.32-p15.31 G protein-coupled receptor 125 2297 rs9013 KYNU 8942 2 143631921 NM_003937 NP_003928 C/T K412E minus 3251684 738 YUSUKE JBIC-ALLELE Japanese (752) 1492 0.3 108 "by cluster,freq" 2q22.3 kynureninase (L-kynurenine hydrolase) 2298 rs9016 GC 2638 4 72983331 NM_000583 NP_000574 A/G H445R minus 6903806 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.01 121 "by cluster,freq" 4q12-q13 group-specific component (vitamin D binding protein) 2299 rs9016 GC 2638 4 72983331 NM_000583 NP_000574 A/G H445R minus 6903806 775 SNP500CANCER CAUC1 Caucasian (31) 60 1 121 "by cluster,freq" 4q12-q13 group-specific component (vitamin D binding protein) 2300 rs9016 GC 2638 4 72983331 NM_000583 NP_000574 A/G H445R minus 6903806 776 SNP500CANCER AFR1 African / African-American (24) 48 0.04 121 "by cluster,freq" 4q12-q13 group-specific component (vitamin D binding protein) 2301 rs9016 GC 2638 4 72983331 NM_000583 NP_000574 A/G H445R minus 6903806 777 SNP500CANCER HISP1 Hispanic (23) 46 1 121 "by cluster,freq" 4q12-q13 group-specific component (vitamin D binding protein) 2302 rs9016 GC 2638 4 72983331 NM_000583 NP_000574 A/G H445R minus 6903806 778 SNP500CANCER PAC1 Pacific Rim (24) 48 1 121 "by cluster,freq" 4q12-q13 group-specific component (vitamin D binding protein) 2303 rs9088 HCA112 55365 7 149939164 NM_018487 NP_060957 A/G T208A plus 11143 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.29 121 "by doubleHit,freq,cluster" 7q36.1 hepatocellular carcinoma-associated antigen 112 2304 rs9088 HCA112 55365 7 149939164 NM_018487 NP_060957 A/G T208A plus 10356725 1303 SEQUENOM CEPH CEPH (92) 92 0.29 121 "by doubleHit,freq,cluster" 7q36.1 hepatocellular carcinoma-associated antigen 112 2305 rs9250 SENP6 26054 6 76482008 NM_015571 NP_056386 A/G Y1106C plus 11320 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.25 123 "HapMap,doubleHit,submitter,freq,cluster" 6q13-q14.3 SUMO1/sentrin specific protease 6 2306 rs9250 SENP6 26054 6 76482008 NM_015571 NP_056386 A/G Y1106C plus 1517681 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 123 "HapMap,doubleHit,submitter,freq,cluster" 6q13-q14.3 SUMO1/sentrin specific protease 6 2307 rs9250 SENP6 26054 6 76482008 NM_015571 NP_056386 A/G Y1106C plus 1517681 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.4 123 "HapMap,doubleHit,submitter,freq,cluster" 6q13-q14.3 SUMO1/sentrin specific protease 6 2308 rs9250 SENP6 26054 6 76482008 NM_015571 NP_056386 A/G Y1106C plus 1517681 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 123 "HapMap,doubleHit,submitter,freq,cluster" 6q13-q14.3 SUMO1/sentrin specific protease 6 2309 rs9250 SENP6 26054 6 76482008 NM_015571 NP_056386 A/G Y1106C plus 11824656 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.34 123 "HapMap,doubleHit,submitter,freq,cluster" 6q13-q14.3 SUMO1/sentrin specific protease 6 2310 rs9250 SENP6 26054 6 76482008 NM_015571 NP_056386 A/G Y1106C plus 11824656 1303 SEQUENOM CEPH CEPH (92) 92 0.25 123 "HapMap,doubleHit,submitter,freq,cluster" 6q13-q14.3 SUMO1/sentrin specific protease 6 2311 rs9250 SENP6 26054 6 76482008 NM_015571 NP_056386 A/G Y1106C plus 24408636 1371 PERLEGEN AFD_EUR_PANEL European American (24) 38 0.32 123 "HapMap,doubleHit,submitter,freq,cluster" 6q13-q14.3 SUMO1/sentrin specific protease 6 2312 rs9250 SENP6 26054 6 76482008 NM_015571 NP_056386 A/G Y1106C plus 24408636 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.02 123 "HapMap,doubleHit,submitter,freq,cluster" 6q13-q14.3 SUMO1/sentrin specific protease 6 2313 rs9250 SENP6 26054 6 76482008 NM_015571 NP_056386 A/G Y1106C plus 24408636 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,doubleHit,submitter,freq,cluster" 6q13-q14.3 SUMO1/sentrin specific protease 6 2314 rs9257 KRT23 25984 17 36338030 NM_015515 NP_056330 C/T T303A plus 3226071 738 YUSUKE JBIC-ALLELE Japanese (752) 1488 0.23 123 "by doubleHit,submitter,freq,cluster" 17q21.2 keratin 23 (histone deacetylase inducible) 2315 rs9257 KRT23 25984 17 36338030 NM_015515 NP_056330 C/T T303A plus 23595111 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "by doubleHit,submitter,freq,cluster" 17q21.2 keratin 23 (histone deacetylase inducible) 2316 rs9257 KRT23 25984 17 36338030 NM_015515 NP_056330 C/T T303A plus 23595111 1372 PERLEGEN AFD_AFR_PANEL African American (24) 23 0.5 123 "by doubleHit,submitter,freq,cluster" 17q21.2 keratin 23 (histone deacetylase inducible) 2317 rs9257 KRT23 25984 17 36338030 NM_015515 NP_056330 C/T T303A plus 23595111 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.15 123 "by doubleHit,submitter,freq,cluster" 17q21.2 keratin 23 (histone deacetylase inducible) 2318 rs9257 KRT23 25984 17 36338030 NM_173213 NP_775320 C/T T90A plus 3226071 738 YUSUKE JBIC-ALLELE Japanese (752) 1488 0.23 123 "by doubleHit,submitter,freq,cluster" 17q21.2 keratin 23 (histone deacetylase inducible) 2319 rs9257 KRT23 25984 17 36338030 NM_173213 NP_775320 C/T T90A plus 23595111 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "by doubleHit,submitter,freq,cluster" 17q21.2 keratin 23 (histone deacetylase inducible) 2320 rs9257 KRT23 25984 17 36338030 NM_173213 NP_775320 C/T T90A plus 23595111 1372 PERLEGEN AFD_AFR_PANEL African American (24) 23 0.5 123 "by doubleHit,submitter,freq,cluster" 17q21.2 keratin 23 (histone deacetylase inducible) 2321 rs9257 KRT23 25984 17 36338030 NM_173213 NP_775320 C/T T90A plus 23595111 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.15 123 "by doubleHit,submitter,freq,cluster" 17q21.2 keratin 23 (histone deacetylase inducible) 2322 rs9260 HLA-DQA2 3118 6 32822069 NM_020056 NP_064440 A/G M230V plus 11330 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.46 123 by freq 6p21.3 "major histocompatibility complex, class II, DQ alpha 2" 2323 rs9350 EXO1 9156 1 238374715 NM_003686 NP_003677 C/T P757L plus 11434 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.2 123 "by cluster,freq" 1q42-q43 exonuclease 1 2324 rs9350 EXO1 9156 1 238374715 NM_003686 NP_003677 C/T P757L plus 1520218 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.23 123 "by cluster,freq" 1q42-q43 exonuclease 1 2325 rs9350 EXO1 9156 1 238374715 NM_003686 NP_003677 C/T P757L plus 1520218 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.23 123 "by cluster,freq" 1q42-q43 exonuclease 1 2326 rs9350 EXO1 9156 1 238374715 NM_003686 NP_003677 C/T P757L plus 1520218 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.18 123 "by cluster,freq" 1q42-q43 exonuclease 1 2327 rs9350 EXO1 9156 1 238374715 NM_003686 NP_003677 C/T P757L plus 5604877 693 EGP_SNPS PDR90 NIHPDR 176 0.31 123 "by cluster,freq" 1q42-q43 exonuclease 1 2328 rs9350 EXO1 9156 1 238374715 NM_003686 NP_003677 C/T P757L plus 5604877 1303 SEQUENOM CEPH CEPH (92) 92 0.2 123 "by cluster,freq" 1q42-q43 exonuclease 1 2329 rs9350 EXO1 9156 1 238374715 NM_003686 NP_003677 C/T P757L plus 24155849 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.13 123 "by cluster,freq" 1q42-q43 exonuclease 1 2330 rs9350 EXO1 9156 1 238374715 NM_003686 NP_003677 C/T P757L plus 24155849 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.17 123 "by cluster,freq" 1q42-q43 exonuclease 1 2331 rs9350 EXO1 9156 1 238374715 NM_003686 NP_003677 C/T P757L plus 24155849 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.42 123 "by cluster,freq" 1q42-q43 exonuclease 1 2332 rs9350 EXO1 9156 1 238374715 NM_006027 NP_006018 C/T P757L plus 11434 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.2 123 "by cluster,freq" 1q42-q43 exonuclease 1 2333 rs9350 EXO1 9156 1 238374715 NM_006027 NP_006018 C/T P757L plus 1520218 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.23 123 "by cluster,freq" 1q42-q43 exonuclease 1 2334 rs9350 EXO1 9156 1 238374715 NM_006027 NP_006018 C/T P757L plus 1520218 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.23 123 "by cluster,freq" 1q42-q43 exonuclease 1 2335 rs9350 EXO1 9156 1 238374715 NM_006027 NP_006018 C/T P757L plus 1520218 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.18 123 "by cluster,freq" 1q42-q43 exonuclease 1 2336 rs9350 EXO1 9156 1 238374715 NM_006027 NP_006018 C/T P757L plus 5604877 693 EGP_SNPS PDR90 NIHPDR 176 0.31 123 "by cluster,freq" 1q42-q43 exonuclease 1 2337 rs9350 EXO1 9156 1 238374715 NM_006027 NP_006018 C/T P757L plus 5604877 1303 SEQUENOM CEPH CEPH (92) 92 0.2 123 "by cluster,freq" 1q42-q43 exonuclease 1 2338 rs9350 EXO1 9156 1 238374715 NM_006027 NP_006018 C/T P757L plus 24155849 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.13 123 "by cluster,freq" 1q42-q43 exonuclease 1 2339 rs9350 EXO1 9156 1 238374715 NM_006027 NP_006018 C/T P757L plus 24155849 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.17 123 "by cluster,freq" 1q42-q43 exonuclease 1 2340 rs9350 EXO1 9156 1 238374715 NM_006027 NP_006018 C/T P757L plus 24155849 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.42 123 "by cluster,freq" 1q42-q43 exonuclease 1 2341 rs9350 EXO1 9156 1 238374715 NM_130398 NP_569082 C/T P757L plus 11434 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.2 123 "by cluster,freq" 1q42-q43 exonuclease 1 2342 rs9350 EXO1 9156 1 238374715 NM_130398 NP_569082 C/T P757L plus 1520218 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.23 123 "by cluster,freq" 1q42-q43 exonuclease 1 2343 rs9350 EXO1 9156 1 238374715 NM_130398 NP_569082 C/T P757L plus 1520218 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.23 123 "by cluster,freq" 1q42-q43 exonuclease 1 2344 rs9350 EXO1 9156 1 238374715 NM_130398 NP_569082 C/T P757L plus 1520218 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.18 123 "by cluster,freq" 1q42-q43 exonuclease 1 2345 rs9350 EXO1 9156 1 238374715 NM_130398 NP_569082 C/T P757L plus 5604877 693 EGP_SNPS PDR90 NIHPDR 176 0.31 123 "by cluster,freq" 1q42-q43 exonuclease 1 2346 rs9350 EXO1 9156 1 238374715 NM_130398 NP_569082 C/T P757L plus 5604877 1303 SEQUENOM CEPH CEPH (92) 92 0.2 123 "by cluster,freq" 1q42-q43 exonuclease 1 2347 rs9350 EXO1 9156 1 238374715 NM_130398 NP_569082 C/T P757L plus 24155849 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.13 123 "by cluster,freq" 1q42-q43 exonuclease 1 2348 rs9350 EXO1 9156 1 238374715 NM_130398 NP_569082 C/T P757L plus 24155849 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.17 123 "by cluster,freq" 1q42-q43 exonuclease 1 2349 rs9350 EXO1 9156 1 238374715 NM_130398 NP_569082 C/T P757L plus 24155849 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.42 123 "by cluster,freq" 1q42-q43 exonuclease 1 2350 rs9352 CHAF1A 10036 19 4393336 NM_005483 NP_005474 C/T A905V plus 3177783 619 WICVAR MITOGPOP6 CORIELL Mixed 30 0.4 121 "by cluster,freq" 19p13.3 "chromatin assembly factor 1, subunit A (p150)" 2351 rs9354 NOC4 10328 16 84370834 NM_006067 NP_006058 C/T A205V minus 11438 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 123 by freq 16q24 neighbor of COX4 2352 rs9354 NOC4 10328 16 84370834 NM_006067 NP_006058 C/T A205V minus 11438 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.11 123 by freq 16q24 neighbor of COX4 2353 rs9354 NOC4 10328 16 84370834 NM_006067 NP_006058 C/T A205V minus 11438 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 123 by freq 16q24 neighbor of COX4 2354 rs9354 NOC4 10328 16 84370834 NM_006067 NP_006058 C/T A205V minus 11438 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 16q24 neighbor of COX4 2355 rs9436 PELP1 27043 17 4521500 NM_014389 NP_055204 A/T T1126S minus 11526 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.27 120 "HapMap,submitter,freq" 17p13.3 "proline-, glutamic acid-, leucine-rich protein 1" 2356 rs9436 PELP1 27043 17 4521500 NM_014389 NP_055204 A/T T1126S minus 11526 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.22 120 "HapMap,submitter,freq" 17p13.3 "proline-, glutamic acid-, leucine-rich protein 1" 2357 rs9436 PELP1 27043 17 4521500 NM_014389 NP_055204 A/T T1126S minus 11526 1303 SEQUENOM CEPH CEPH (92) 92 0.27 120 "HapMap,submitter,freq" 17p13.3 "proline-, glutamic acid-, leucine-rich protein 1" 2358 rs9438 DHX36 170506 3 155501589 NM_020865 NP_065916 C/G S416C plus 11529 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.41 120 "HapMap,doubleHit,submitter,freq,cluster" 3p13-q23 DEAH (Asp-Glu-Ala-His) box polypeptide 36 2359 rs9438 DHX36 170506 3 155501589 NM_020865 NP_065916 C/G S416C plus 3110895 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.35 120 "HapMap,doubleHit,submitter,freq,cluster" 3p13-q23 DEAH (Asp-Glu-Ala-His) box polypeptide 36 2360 rs9438 DHX36 170506 3 155501589 NM_020865 NP_065916 C/G S416C plus 3110895 1303 SEQUENOM CEPH CEPH (92) 92 0.41 120 "HapMap,doubleHit,submitter,freq,cluster" 3p13-q23 DEAH (Asp-Glu-Ala-His) box polypeptide 36 2361 rs9508 ATPIF1 93974 1 28248421 NM_178190 NP_835497 C/T R63G minus 11605 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.23 123 "by doubleHit,submitter,freq" 1p35.3 ATPase inhibitory factor 1 2362 rs9508 ATPIF1 93974 1 28248421 NM_178190 NP_835497 C/T R63G minus 2287204 1303 SEQUENOM CEPH CEPH (92) 92 0.23 123 "by doubleHit,submitter,freq" 1p35.3 ATPase inhibitory factor 1 2363 rs9508 ATPIF1 93974 1 28248421 NM_178190 NP_835497 C/T R63G minus 23668319 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.19 123 "by doubleHit,submitter,freq" 1p35.3 ATPase inhibitory factor 1 2364 rs9508 ATPIF1 93974 1 28248421 NM_178190 NP_835497 C/T R63G minus 23668319 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.41 123 "by doubleHit,submitter,freq" 1p35.3 ATPase inhibitory factor 1 2365 rs9508 ATPIF1 93974 1 28248421 NM_178190 NP_835497 C/T R63G minus 23668319 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.08 123 "by doubleHit,submitter,freq" 1p35.3 ATPase inhibitory factor 1 2366 rs9530 GUSB 2990 7 64870044 NM_000181 NP_000172 C/T L649P minus 11628 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.39 123 "HapMap,doubleHit,submitter,freq,cluster" 7q21.11 "glucuronidase, beta" 2367 rs9530 GUSB 2990 7 64870044 NM_000181 NP_000172 C/T L649P minus 3236347 738 YUSUKE JBIC-ALLELE Japanese (752) 1494 0.09 123 "HapMap,doubleHit,submitter,freq,cluster" 7q21.11 "glucuronidase, beta" 2368 rs9530 GUSB 2990 7 64870044 NM_000181 NP_000172 C/T L649P minus 6502398 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.47 123 "HapMap,doubleHit,submitter,freq,cluster" 7q21.11 "glucuronidase, beta" 2369 rs9530 GUSB 2990 7 64870044 NM_000181 NP_000172 C/T L649P minus 6502398 1303 SEQUENOM CEPH CEPH (92) 92 0.39 123 "HapMap,doubleHit,submitter,freq,cluster" 7q21.11 "glucuronidase, beta" 2370 rs9530 GUSB 2990 7 64870044 NM_000181 NP_000172 C/T L649P minus 24496672 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 7q21.11 "glucuronidase, beta" 2371 rs9530 GUSB 2990 7 64870044 NM_000181 NP_000172 C/T L649P minus 24496672 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.36 123 "HapMap,doubleHit,submitter,freq,cluster" 7q21.11 "glucuronidase, beta" 2372 rs9530 GUSB 2990 7 64870044 NM_000181 NP_000172 C/T L649P minus 24496672 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.13 123 "HapMap,doubleHit,submitter,freq,cluster" 7q21.11 "glucuronidase, beta" 2373 rs9575 NSFL1C 55968 20 1374393 NM_016143 NP_057227 A/G D290N minus 11676 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.37 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2374 rs9575 NSFL1C 55968 20 1374393 NM_016143 NP_057227 A/G D290N minus 1514018 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.16 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2375 rs9575 NSFL1C 55968 20 1374393 NM_016143 NP_057227 A/G D290N minus 1514018 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.33 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2376 rs9575 NSFL1C 55968 20 1374393 NM_016143 NP_057227 A/G D290N minus 1514018 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.37 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2377 rs9575 NSFL1C 55968 20 1374393 NM_016143 NP_057227 A/G D290N minus 3208727 738 YUSUKE JBIC-ALLELE Japanese (752) 1502 0.32 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2378 rs9575 NSFL1C 55968 20 1374393 NM_016143 NP_057227 A/G D290N minus 8351706 1303 SEQUENOM CEPH CEPH (92) 92 0.37 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2379 rs9575 NSFL1C 55968 20 1374393 NM_016143 NP_057227 A/G D290N minus 24596725 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2380 rs9575 NSFL1C 55968 20 1374393 NM_016143 NP_057227 A/G D290N minus 24596725 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.3 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2381 rs9575 NSFL1C 55968 20 1374393 NM_016143 NP_057227 A/G D290N minus 24596725 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.23 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2382 rs9575 NSFL1C 55968 20 1374393 NM_018839 NP_061327 A/G D259N minus 11676 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.37 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2383 rs9575 NSFL1C 55968 20 1374393 NM_018839 NP_061327 A/G D259N minus 1514018 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.16 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2384 rs9575 NSFL1C 55968 20 1374393 NM_018839 NP_061327 A/G D259N minus 1514018 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.33 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2385 rs9575 NSFL1C 55968 20 1374393 NM_018839 NP_061327 A/G D259N minus 1514018 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.37 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2386 rs9575 NSFL1C 55968 20 1374393 NM_018839 NP_061327 A/G D259N minus 3208727 738 YUSUKE JBIC-ALLELE Japanese (752) 1502 0.32 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2387 rs9575 NSFL1C 55968 20 1374393 NM_018839 NP_061327 A/G D259N minus 8351706 1303 SEQUENOM CEPH CEPH (92) 92 0.37 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2388 rs9575 NSFL1C 55968 20 1374393 NM_018839 NP_061327 A/G D259N minus 24596725 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2389 rs9575 NSFL1C 55968 20 1374393 NM_018839 NP_061327 A/G D259N minus 24596725 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.3 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2390 rs9575 NSFL1C 55968 20 1374393 NM_018839 NP_061327 A/G D259N minus 24596725 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.23 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2391 rs9575 NSFL1C 55968 20 1374393 NM_182483 NP_872289 A/G D179N minus 11676 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.37 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2392 rs9575 NSFL1C 55968 20 1374393 NM_182483 NP_872289 A/G D179N minus 1514018 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.16 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2393 rs9575 NSFL1C 55968 20 1374393 NM_182483 NP_872289 A/G D179N minus 1514018 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.33 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2394 rs9575 NSFL1C 55968 20 1374393 NM_182483 NP_872289 A/G D179N minus 1514018 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.37 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2395 rs9575 NSFL1C 55968 20 1374393 NM_182483 NP_872289 A/G D179N minus 3208727 738 YUSUKE JBIC-ALLELE Japanese (752) 1502 0.32 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2396 rs9575 NSFL1C 55968 20 1374393 NM_182483 NP_872289 A/G D179N minus 8351706 1303 SEQUENOM CEPH CEPH (92) 92 0.37 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2397 rs9575 NSFL1C 55968 20 1374393 NM_182483 NP_872289 A/G D179N minus 24596725 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2398 rs9575 NSFL1C 55968 20 1374393 NM_182483 NP_872289 A/G D179N minus 24596725 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.3 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2399 rs9575 NSFL1C 55968 20 1374393 NM_182483 NP_872289 A/G D179N minus 24596725 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.23 123 "by doubleHit,submitter,freq,cluster" 20p13 NSFL1 (p97) cofactor (p47) 2400 rs9593 MMAB 326625 12 108457590 NM_052845 NP_443077 A/T M239K minus 11696 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.4 123 "HapMap,doubleHit,freq,cluster" 12q24 methylmalonic aciduria (cobalamin deficiency) type B 2401 rs9593 MMAB 326625 12 108457590 NM_052845 NP_443077 A/T M239K minus 1302850 885 TSC-CSHL HapMap-CEPH-30-trios 60 0.5 123 "HapMap,doubleHit,freq,cluster" 12q24 methylmalonic aciduria (cobalamin deficiency) type B 2402 rs9593 MMAB 326625 12 108457590 NM_052845 NP_443077 A/T M239K minus 1302850 1303 SEQUENOM CEPH CEPH (92) 92 0.4 123 "HapMap,doubleHit,freq,cluster" 12q24 methylmalonic aciduria (cobalamin deficiency) type B 2403 rs9593 MMAB 326625 12 108457590 NM_052845 NP_443077 A/T M239K minus 23384325 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.31 123 "HapMap,doubleHit,freq,cluster" 12q24 methylmalonic aciduria (cobalamin deficiency) type B 2404 rs9593 MMAB 326625 12 108457590 NM_052845 NP_443077 A/T M239K minus 23384325 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.35 123 "HapMap,doubleHit,freq,cluster" 12q24 methylmalonic aciduria (cobalamin deficiency) type B 2405 rs9593 MMAB 326625 12 108457590 NM_052845 NP_443077 A/T M239K minus 23384325 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.25 123 "HapMap,doubleHit,freq,cluster" 12q24 methylmalonic aciduria (cobalamin deficiency) type B 2406 rs9600 NDUFS3 4722 11 47562560 NM_004551 NP_004542 A/C P249Q plus 11703 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.11 52 by freq 11p11.11 "NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)" 2407 rs9600 NDUFS3 4722 11 47562560 NM_004551 NP_004542 A/C P249Q plus 11703 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.14 52 by freq 11p11.11 "NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)" 2408 rs9600 NDUFS3 4722 11 47562560 NM_004551 NP_004542 A/C P249Q plus 11703 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 52 by freq 11p11.11 "NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)" 2409 rs9600 NDUFS3 4722 11 47562560 NM_004551 NP_004542 A/C P249Q plus 11703 1303 SEQUENOM CEPH CEPH (92) 92 1 52 by freq 11p11.11 "NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)" 2410 rs9614 FBXO2 26232 1 11644827 NM_012168 NP_036300 A/C K118T minus 1343940 1303 SEQUENOM CEPH CEPH (92) 92 0.19 120 by freq 1p36.21 F-box protein 2 2411 rs9820 PABPC4 8761 1 39699971 NM_003819 NP_003810 A/T Y382F minus 11938 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 120 by freq 1p32-p36 "poly(A) binding protein, cytoplasmic 4 (inducible form)" 2412 rs9820 PABPC4 8761 1 39699971 NM_003819 NP_003810 A/T Y382F minus 11938 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 120 by freq 1p32-p36 "poly(A) binding protein, cytoplasmic 4 (inducible form)" 2413 rs9820 PABPC4 8761 1 39699971 NM_003819 NP_003810 A/T Y382F minus 11938 1303 SEQUENOM CEPH CEPH (92) 92 1 120 by freq 1p32-p36 "poly(A) binding protein, cytoplasmic 4 (inducible form)" 2414 rs10012 CYP1B1 1545 2 38214041 NM_000104 NP_000095 C/G R48G minus 6903740 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.35 123 "by doubleHit,freq,cluster" 2p21 "cytochrome P450, family 1, subfamily B, polypeptide 1" 2415 rs10012 CYP1B1 1545 2 38214041 NM_000104 NP_000095 C/G R48G minus 6903740 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.23 123 "by doubleHit,freq,cluster" 2p21 "cytochrome P450, family 1, subfamily B, polypeptide 1" 2416 rs10012 CYP1B1 1545 2 38214041 NM_000104 NP_000095 C/G R48G minus 6903740 776 SNP500CANCER AFR1 African / African-American (24) 48 0.4 123 "by doubleHit,freq,cluster" 2p21 "cytochrome P450, family 1, subfamily B, polypeptide 1" 2417 rs10012 CYP1B1 1545 2 38214041 NM_000104 NP_000095 C/G R48G minus 6903740 777 SNP500CANCER HISP1 Hispanic (23) 46 0.3 123 "by doubleHit,freq,cluster" 2p21 "cytochrome P450, family 1, subfamily B, polypeptide 1" 2418 rs10012 CYP1B1 1545 2 38214041 NM_000104 NP_000095 C/G R48G minus 6903740 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.29 123 "by doubleHit,freq,cluster" 2p21 "cytochrome P450, family 1, subfamily B, polypeptide 1" 2419 rs10012 CYP1B1 1545 2 38214041 NM_000104 NP_000095 C/G R48G minus 12724380 693 EGP_SNPS PDR90 NIHPDR 172 0.4 123 "by doubleHit,freq,cluster" 2p21 "cytochrome P450, family 1, subfamily B, polypeptide 1" 2420 rs10012 CYP1B1 1545 2 38214041 NM_000104 NP_000095 C/G R48G minus 12724380 1303 SEQUENOM CEPH CEPH (92) 92 0.16 123 "by doubleHit,freq,cluster" 2p21 "cytochrome P450, family 1, subfamily B, polypeptide 1" 2421 rs10067 OVGP1 5016 1 111669353 NM_002557 NP_002548 C/G H604Q plus 12205 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.41 123 "by submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2422 rs10067 OVGP1 5016 1 111669353 NM_002557 NP_002548 C/G H604Q plus 12205 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.19 123 "by submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2423 rs10067 OVGP1 5016 1 111669353 NM_002557 NP_002548 C/G H604Q plus 12205 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.46 123 "by submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2424 rs10067 OVGP1 5016 1 111669353 NM_002557 NP_002548 C/G H604Q plus 2640019 1303 SEQUENOM CEPH CEPH (92) 92 0.1 123 "by submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2425 rs10067 OVGP1 5016 1 111669353 NM_002557 NP_002548 C/G H604Q plus 4953654 738 YUSUKE JBIC-ALLELE Japanese (752) 1280 0.43 123 "by submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2426 rs10067 OVGP1 5016 1 111669353 NM_002557 NP_002548 C/G H604Q plus 23860871 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "by submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2427 rs10067 OVGP1 5016 1 111669353 NM_002557 NP_002548 C/G H604Q plus 23860871 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.35 123 "by submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2428 rs10067 OVGP1 5016 1 111669353 NM_002557 NP_002548 C/G H604Q plus 23860871 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.48 123 "by submitter,freq,cluster" 1p13 "oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)" 2429 rs10093 HLA-DQA2 3118 6 32821000 NM_020056 NP_064440 C/G E57Q plus 12233 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 123 by freq 6p21.3 "major histocompatibility complex, class II, DQ alpha 2" 2430 rs10093 HLA-DQA2 3118 6 32821000 NM_020056 NP_064440 C/G E57Q plus 12233 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 123 by freq 6p21.3 "major histocompatibility complex, class II, DQ alpha 2" 2431 rs10093 HLA-DQA2 3118 6 32821000 NM_020056 NP_064440 C/G E57Q plus 12233 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 123 by freq 6p21.3 "major histocompatibility complex, class II, DQ alpha 2" 2432 rs10093 HLA-DQA2 3118 6 32821000 NM_020056 NP_064440 C/G E57Q plus 12233 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.49 123 by freq 6p21.3 "major histocompatibility complex, class II, DQ alpha 2" 2433 rs10242 RPP38 10557 10 15185954 NM_006414 NP_006405 C/T I212T plus 12391 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 52 by freq 10p13 ribonuclease P/MRP 38kDa subunit 2434 rs10242 RPP38 10557 10 15185954 NM_006414 NP_006405 C/T I212T plus 12391 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.09 52 by freq 10p13 ribonuclease P/MRP 38kDa subunit 2435 rs10242 RPP38 10557 10 15185954 NM_006414 NP_006405 C/T I212T plus 12391 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.04 52 by freq 10p13 ribonuclease P/MRP 38kDa subunit 2436 rs10242 RPP38 10557 10 15185954 NM_006414 NP_006405 C/T I212T plus 12391 1303 SEQUENOM CEPH CEPH (92) 92 0.02 52 by freq 10p13 ribonuclease P/MRP 38kDa subunit 2437 rs10242 RPP38 10557 10 15185954 NM_183005 NP_892117 C/T I212T plus 12391 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 52 by freq 10p13 ribonuclease P/MRP 38kDa subunit 2438 rs10242 RPP38 10557 10 15185954 NM_183005 NP_892117 C/T I212T plus 12391 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.09 52 by freq 10p13 ribonuclease P/MRP 38kDa subunit 2439 rs10242 RPP38 10557 10 15185954 NM_183005 NP_892117 C/T I212T plus 12391 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.04 52 by freq 10p13 ribonuclease P/MRP 38kDa subunit 2440 rs10242 RPP38 10557 10 15185954 NM_183005 NP_892117 C/T I212T plus 12391 1303 SEQUENOM CEPH CEPH (92) 92 0.02 52 by freq 10p13 ribonuclease P/MRP 38kDa subunit 2441 rs10243 KIF21A 55605 12 37981609 NM_017641 NP_060111 A/G G1611D minus 1517543 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 120 by freq 12q12 kinesin family member 21A 2442 rs10243 KIF21A 55605 12 37981609 NM_017641 NP_060111 A/G G1611D minus 1517543 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 120 by freq 12q12 kinesin family member 21A 2443 rs10243 KIF21A 55605 12 37981609 NM_017641 NP_060111 A/G G1611D minus 1517543 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 120 by freq 12q12 kinesin family member 21A 2444 rs10243 KIF21A 55605 12 37981609 NM_017641 NP_060111 A/G G1611D minus 1517543 1303 SEQUENOM CEPH CEPH (92) 92 1 120 by freq 12q12 kinesin family member 21A 2445 rs10330 COPE 11316 19 18878862 NM_007263 NP_009194 C/T T117I minus 12481 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.24 120 HapMap 19p13.11 "coatomer protein complex, subunit epsilon" 2446 rs10330 COPE 11316 19 18878862 NM_007263 NP_009194 C/T T117I minus 12481 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 120 HapMap 19p13.11 "coatomer protein complex, subunit epsilon" 2447 rs10330 COPE 11316 19 18878862 NM_007263 NP_009194 C/T T117I minus 12481 1303 SEQUENOM CEPH CEPH (92) 92 0.24 120 HapMap 19p13.11 "coatomer protein complex, subunit epsilon" 2448 rs10330 COPE 11316 19 18878862 NM_199444 NP_955476 C/T T117I minus 12481 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.24 120 HapMap 19p13.11 "coatomer protein complex, subunit epsilon" 2449 rs10330 COPE 11316 19 18878862 NM_199444 NP_955476 C/T T117I minus 12481 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 120 HapMap 19p13.11 "coatomer protein complex, subunit epsilon" 2450 rs10330 COPE 11316 19 18878862 NM_199444 NP_955476 C/T T117I minus 12481 1303 SEQUENOM CEPH CEPH (92) 92 0.24 120 HapMap 19p13.11 "coatomer protein complex, subunit epsilon" 2451 rs10371 CACH-1 134526 5 80667398 NM_130767 NP_570123 C/T A403T plus 12523 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.2 120 "HapMap,submitter,freq,cluster" 5q14.1 cytosolic acetyl-CoA hydrolase 2452 rs10371 CACH-1 134526 5 80667398 NM_130767 NP_570123 C/T A403T plus 1530425 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.21 120 "HapMap,submitter,freq,cluster" 5q14.1 cytosolic acetyl-CoA hydrolase 2453 rs10371 CACH-1 134526 5 80667398 NM_130767 NP_570123 C/T A403T plus 17069119 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.21 120 "HapMap,submitter,freq,cluster" 5q14.1 cytosolic acetyl-CoA hydrolase 2454 rs10371 CACH-1 134526 5 80667398 NM_130767 NP_570123 C/T A403T plus 17069119 1303 SEQUENOM CEPH CEPH (92) 92 0.2 120 "HapMap,submitter,freq,cluster" 5q14.1 cytosolic acetyl-CoA hydrolase 2455 rs10380 MTRR 4552 5 7950191 NM_002454 NP_002445 C/T H595Y plus 12532 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.2 120 "by cluster,freq" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2456 rs10380 MTRR 4552 5 7950191 NM_002454 NP_002445 C/T H595Y plus 3228713 738 YUSUKE JBIC-ALLELE Japanese (752) 1486 0.12 120 "by cluster,freq" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2457 rs10380 MTRR 4552 5 7950191 NM_002454 NP_002445 C/T H595Y plus 12675544 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 192 0.19 120 "by cluster,freq" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2458 rs10380 MTRR 4552 5 7950191 NM_002454 NP_002445 C/T H595Y plus 12675544 775 SNP500CANCER CAUC1 Caucasian (31) 56 0.18 120 "by cluster,freq" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2459 rs10380 MTRR 4552 5 7950191 NM_002454 NP_002445 C/T H595Y plus 12675544 776 SNP500CANCER AFR1 African / African-American (24) 42 0.19 120 "by cluster,freq" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2460 rs10380 MTRR 4552 5 7950191 NM_002454 NP_002445 C/T H595Y plus 12675544 777 SNP500CANCER HISP1 Hispanic (23) 46 0.2 120 "by cluster,freq" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2461 rs10380 MTRR 4552 5 7950191 NM_002454 NP_002445 C/T H595Y plus 12675544 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.21 120 "by cluster,freq" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2462 rs10380 MTRR 4552 5 7950191 NM_024010 NP_076915 C/T H622Y plus 12532 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.2 120 "by cluster,freq" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2463 rs10380 MTRR 4552 5 7950191 NM_024010 NP_076915 C/T H622Y plus 3228713 738 YUSUKE JBIC-ALLELE Japanese (752) 1486 0.12 120 "by cluster,freq" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2464 rs10380 MTRR 4552 5 7950191 NM_024010 NP_076915 C/T H622Y plus 12675544 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 192 0.19 120 "by cluster,freq" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2465 rs10380 MTRR 4552 5 7950191 NM_024010 NP_076915 C/T H622Y plus 12675544 775 SNP500CANCER CAUC1 Caucasian (31) 56 0.18 120 "by cluster,freq" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2466 rs10380 MTRR 4552 5 7950191 NM_024010 NP_076915 C/T H622Y plus 12675544 776 SNP500CANCER AFR1 African / African-American (24) 42 0.19 120 "by cluster,freq" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2467 rs10380 MTRR 4552 5 7950191 NM_024010 NP_076915 C/T H622Y plus 12675544 777 SNP500CANCER HISP1 Hispanic (23) 46 0.2 120 "by cluster,freq" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2468 rs10380 MTRR 4552 5 7950191 NM_024010 NP_076915 C/T H622Y plus 12675544 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.21 120 "by cluster,freq" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2469 rs10444 C1D 10438 2 68181719 NM_006333 NP_006324 C/T S127P minus 12601 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.32 120 by freq 2p13-p12 nuclear DNA-binding protein 2470 rs10444 C1D 10438 2 68181719 NM_006333 NP_006324 C/T S127P minus 6431782 1303 SEQUENOM CEPH CEPH (92) 92 0.32 120 by freq 2p13-p12 nuclear DNA-binding protein 2471 rs10444 C1D 10438 2 68181719 NM_173177 NP_775269 C/T S127P minus 12601 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.32 120 by freq 2p13-p12 nuclear DNA-binding protein 2472 rs10444 C1D 10438 2 68181719 NM_173177 NP_775269 C/T S127P minus 6431782 1303 SEQUENOM CEPH CEPH (92) 92 0.32 120 by freq 2p13-p12 nuclear DNA-binding protein 2473 rs10455 CYBRD1 79901 2 172236780 NM_024843 NP_079119 A/G S266N plus 12612 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.22 123 "by doubleHit,freq,cluster" 2q31.1 cytochrome b reductase 1 2474 rs10455 CYBRD1 79901 2 172236780 NM_024843 NP_079119 A/G S266N plus 1543659 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.07 123 "by doubleHit,freq,cluster" 2q31.1 cytochrome b reductase 1 2475 rs10455 CYBRD1 79901 2 172236780 NM_024843 NP_079119 A/G S266N plus 1543659 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.29 123 "by doubleHit,freq,cluster" 2q31.1 cytochrome b reductase 1 2476 rs10455 CYBRD1 79901 2 172236780 NM_024843 NP_079119 A/G S266N plus 1543659 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.49 123 "by doubleHit,freq,cluster" 2q31.1 cytochrome b reductase 1 2477 rs10455 CYBRD1 79901 2 172236780 NM_024843 NP_079119 A/G S266N plus 3565255 1303 SEQUENOM CEPH CEPH (92) 92 0.22 123 "by doubleHit,freq,cluster" 2q31.1 cytochrome b reductase 1 2478 rs10455 CYBRD1 79901 2 172236780 NM_024843 NP_079119 A/G S266N plus 23905769 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "by doubleHit,freq,cluster" 2q31.1 cytochrome b reductase 1 2479 rs10455 CYBRD1 79901 2 172236780 NM_024843 NP_079119 A/G S266N plus 23905769 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "by doubleHit,freq,cluster" 2q31.1 cytochrome b reductase 1 2480 rs10455 CYBRD1 79901 2 172236780 NM_024843 NP_079119 A/G S266N plus 23905769 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.29 123 "by doubleHit,freq,cluster" 2q31.1 cytochrome b reductase 1 2481 rs10480 MRPS21 54460 1 147093619 NM_018997 NP_061870 C/T R50C plus 12637 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.07 120 by freq 1q21 mitochondrial ribosomal protein S21 2482 rs10480 MRPS21 54460 1 147093619 NM_018997 NP_061870 C/T R50C plus 12637 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.05 120 by freq 1q21 mitochondrial ribosomal protein S21 2483 rs10480 MRPS21 54460 1 147093619 NM_018997 NP_061870 C/T R50C plus 12637 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 120 by freq 1q21 mitochondrial ribosomal protein S21 2484 rs10480 MRPS21 54460 1 147093619 NM_018997 NP_061870 C/T R50C plus 12637 1303 SEQUENOM CEPH CEPH (92) 92 0.02 120 by freq 1q21 mitochondrial ribosomal protein S21 2485 rs10480 MRPS21 54460 1 147093619 NM_031901 NP_114107 C/T R50C plus 12637 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.07 120 by freq 1q21 mitochondrial ribosomal protein S21 2486 rs10480 MRPS21 54460 1 147093619 NM_031901 NP_114107 C/T R50C plus 12637 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.05 120 by freq 1q21 mitochondrial ribosomal protein S21 2487 rs10480 MRPS21 54460 1 147093619 NM_031901 NP_114107 C/T R50C plus 12637 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 120 by freq 1q21 mitochondrial ribosomal protein S21 2488 rs10480 MRPS21 54460 1 147093619 NM_031901 NP_114107 C/T R50C plus 12637 1303 SEQUENOM CEPH CEPH (92) 92 0.02 120 by freq 1q21 mitochondrial ribosomal protein S21 2489 rs10502 UBE2J1 51465 6 90096389 NM_016021 NP_057105 C/G L229V minus 4963580 738 YUSUKE JBIC-ALLELE Japanese (752) 1472 0.27 123 by freq 6q16.1 "ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)" 2490 rs10502 UBE2J1 51465 6 90096389 NM_016021 NP_057105 C/G L229V minus 4963580 901 AFFY AfAm 12 0.08 123 by freq 6q16.1 "ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)" 2491 rs10502 UBE2J1 51465 6 90096389 NM_016021 NP_057105 C/G L229V minus 4963580 902 AFFY Caucasian 24 0.42 123 by freq 6q16.1 "ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)" 2492 rs10502 UBE2J1 51465 6 90096389 NM_016021 NP_057105 C/G L229V minus 4963580 903 AFFY Asian 10 0.2 123 by freq 6q16.1 "ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)" 2493 rs10502 UBE2J1 51465 6 90096389 NM_016021 NP_057105 C/G L229V minus 4963580 904 AFFY CEPH 12 0.33 123 by freq 6q16.1 "ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)" 2494 rs10502 UBE2J1 51465 6 90096389 NM_016021 NP_057105 C/G L229V minus 4963580 905 AFFY PDpanel 48 0.29 123 by freq 6q16.1 "ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)" 2495 rs10502 UBE2J1 51465 6 90096389 NM_016021 NP_057105 C/G L229V minus 12824947 1303 SEQUENOM CEPH CEPH (92) 93 0.41 123 by freq 6q16.1 "ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)" 2496 rs10502 UBE2J1 51465 6 90096389 NM_016021 NP_057105 C/G L229V minus 24399052 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.31 123 by freq 6q16.1 "ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)" 2497 rs10502 UBE2J1 51465 6 90096389 NM_016021 NP_057105 C/G L229V minus 24399052 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.2 123 by freq 6q16.1 "ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)" 2498 rs10502 UBE2J1 51465 6 90096389 NM_016021 NP_057105 C/G L229V minus 24399052 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.31 123 by freq 6q16.1 "ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)" 2499 rs10583 TM9SF1 10548 14 23732017 NM_006405 NP_006396 A/G R215H minus 12745 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.04 123 "HapMap,submitter,freq" 14q11.2 transmembrane 9 superfamily member 1 2500 rs10583 TM9SF1 10548 14 23732017 NM_006405 NP_006396 A/G R215H minus 12745 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.3 123 "HapMap,submitter,freq" 14q11.2 transmembrane 9 superfamily member 1 2501 rs10583 TM9SF1 10548 14 23732017 NM_006405 NP_006396 A/G R215H minus 12745 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 123 "HapMap,submitter,freq" 14q11.2 transmembrane 9 superfamily member 1 2502 rs10583 TM9SF1 10548 14 23732017 NM_006405 NP_006396 A/G R215H minus 12745 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.11 123 "HapMap,submitter,freq" 14q11.2 transmembrane 9 superfamily member 1 2503 rs10583 TM9SF1 10548 14 23732017 NM_006405 NP_006396 A/G R215H minus 12745 1303 SEQUENOM CEPH CEPH (92) 92 0.09 123 "HapMap,submitter,freq" 14q11.2 transmembrane 9 superfamily member 1 2504 rs10583 TM9SF1 10548 14 23732017 NM_006405 NP_006396 A/G R215H minus 24709484 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.13 123 "HapMap,submitter,freq" 14q11.2 transmembrane 9 superfamily member 1 2505 rs10583 TM9SF1 10548 14 23732017 NM_006405 NP_006396 A/G R215H minus 24709484 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "HapMap,submitter,freq" 14q11.2 transmembrane 9 superfamily member 1 2506 rs10583 TM9SF1 10548 14 23732017 NM_006405 NP_006396 A/G R215H minus 24709484 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,submitter,freq" 14q11.2 transmembrane 9 superfamily member 1 2507 rs10642 EIF5B 9669 2 99438715 NM_015904 NP_056988 A/G S337G plus 12805 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.12 52 by freq 2p11.1-q11.1 eukaryotic translation initiation factor 5B 2508 rs10642 EIF5B 9669 2 99438715 NM_015904 NP_056988 A/G S337G plus 12805 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.03 52 by freq 2p11.1-q11.1 eukaryotic translation initiation factor 5B 2509 rs10642 EIF5B 9669 2 99438715 NM_015904 NP_056988 A/G S337G plus 12805 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.05 52 by freq 2p11.1-q11.1 eukaryotic translation initiation factor 5B 2510 rs10755 LGALS14 56891 19 44891754 NM_020129 NP_064514 C/G F127L plus 12921 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.3 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2511 rs10755 LGALS14 56891 19 44891754 NM_020129 NP_064514 C/G F127L plus 1516909 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.26 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2512 rs10755 LGALS14 56891 19 44891754 NM_020129 NP_064514 C/G F127L plus 1516909 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.46 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2513 rs10755 LGALS14 56891 19 44891754 NM_020129 NP_064514 C/G F127L plus 1516909 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.38 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2514 rs10755 LGALS14 56891 19 44891754 NM_020129 NP_064514 C/G F127L plus 3227327 738 YUSUKE JBIC-ALLELE Japanese (752) 1470 0.43 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2515 rs10755 LGALS14 56891 19 44891754 NM_020129 NP_064514 C/G F127L plus 3227327 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.3 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2516 rs10755 LGALS14 56891 19 44891754 NM_020129 NP_064514 C/G F127L plus 21526673 1303 SEQUENOM CEPH CEPH (92) 92 0.3 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2517 rs10755 LGALS14 56891 19 44891754 NM_020129 NP_064514 C/G F127L plus 24683934 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.43 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2518 rs10755 LGALS14 56891 19 44891754 NM_020129 NP_064514 C/G F127L plus 24683934 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.28 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2519 rs10755 LGALS14 56891 19 44891754 NM_020129 NP_064514 C/G F127L plus 24683934 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2520 rs10755 LGALS14 56891 19 44891754 NM_203471 NP_982297 C/G F156L plus 12921 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.3 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2521 rs10755 LGALS14 56891 19 44891754 NM_203471 NP_982297 C/G F156L plus 1516909 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.26 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2522 rs10755 LGALS14 56891 19 44891754 NM_203471 NP_982297 C/G F156L plus 1516909 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.46 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2523 rs10755 LGALS14 56891 19 44891754 NM_203471 NP_982297 C/G F156L plus 1516909 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.38 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2524 rs10755 LGALS14 56891 19 44891754 NM_203471 NP_982297 C/G F156L plus 3227327 738 YUSUKE JBIC-ALLELE Japanese (752) 1470 0.43 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2525 rs10755 LGALS14 56891 19 44891754 NM_203471 NP_982297 C/G F156L plus 3227327 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.3 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2526 rs10755 LGALS14 56891 19 44891754 NM_203471 NP_982297 C/G F156L plus 21526673 1303 SEQUENOM CEPH CEPH (92) 92 0.3 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2527 rs10755 LGALS14 56891 19 44891754 NM_203471 NP_982297 C/G F156L plus 24683934 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.43 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2528 rs10755 LGALS14 56891 19 44891754 NM_203471 NP_982297 C/G F156L plus 24683934 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.28 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2529 rs10755 LGALS14 56891 19 44891754 NM_203471 NP_982297 C/G F156L plus 24683934 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "HapMap,freq,cluster" 19q13.2 "lectin, galactoside-binding, soluble, 14" 2530 rs10806 THAP11 57215 16 66434848 NM_020457 NP_065190 G/T R297L plus 12974 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 120 HapMap 16q22.1 THAP domain containing 11 2531 rs10806 THAP11 57215 16 66434848 NM_020457 NP_065190 G/T R297L plus 12974 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 120 HapMap 16q22.1 THAP domain containing 11 2532 rs10806 THAP11 57215 16 66434848 NM_020457 NP_065190 G/T R297L plus 12974 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.18 120 HapMap 16q22.1 THAP domain containing 11 2533 rs10806 THAP11 57215 16 66434848 NM_020457 NP_065190 G/T R297L plus 12974 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 120 HapMap 16q22.1 THAP domain containing 11 2534 rs10806 THAP11 57215 16 66434848 NM_020457 NP_065190 G/T R297L plus 12974 1303 SEQUENOM CEPH CEPH (92) 92 1 120 HapMap 16q22.1 THAP domain containing 11 2535 rs10846 PKN1 5585 19 14443468 NM_002741 NP_002732 A/G V901I plus 13018 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.18 120 "by doubleHit,freq,cluster" 19p13.1-p12 protein kinase C-like 1 2536 rs10846 PKN1 5585 19 14443468 NM_002741 NP_002732 A/G V901I plus 3177680 619 WICVAR MITOGPOP6 CORIELL Mixed 62 0.16 120 "by doubleHit,freq,cluster" 19p13.1-p12 protein kinase C-like 1 2537 rs10846 PKN1 5585 19 14443468 NM_002741 NP_002732 A/G V901I plus 4931471 738 YUSUKE JBIC-ALLELE Japanese (752) 1494 0.15 120 "by doubleHit,freq,cluster" 19p13.1-p12 protein kinase C-like 1 2538 rs10846 PKN1 5585 19 14443468 NM_002741 NP_002732 A/G V901I plus 20063928 1303 SEQUENOM CEPH CEPH (92) 92 0.18 120 "by doubleHit,freq,cluster" 19p13.1-p12 protein kinase C-like 1 2539 rs10846 PKN1 5585 19 14443468 NM_213560 NP_998725 A/G V907I plus 13018 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.18 120 "by doubleHit,freq,cluster" 19p13.1-p12 protein kinase C-like 1 2540 rs10846 PKN1 5585 19 14443468 NM_213560 NP_998725 A/G V907I plus 3177680 619 WICVAR MITOGPOP6 CORIELL Mixed 62 0.16 120 "by doubleHit,freq,cluster" 19p13.1-p12 protein kinase C-like 1 2541 rs10846 PKN1 5585 19 14443468 NM_213560 NP_998725 A/G V907I plus 4931471 738 YUSUKE JBIC-ALLELE Japanese (752) 1494 0.15 120 "by doubleHit,freq,cluster" 19p13.1-p12 protein kinase C-like 1 2542 rs10846 PKN1 5585 19 14443468 NM_213560 NP_998725 A/G V907I plus 20063928 1303 SEQUENOM CEPH CEPH (92) 92 0.18 120 "by doubleHit,freq,cluster" 19p13.1-p12 protein kinase C-like 1 2543 rs10869 SYNGR4 23546 19 53571289 NM_012451 NP_036583 C/T T203A minus 13042 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 120 by freq 19q13.3 synaptogyrin 4 2544 rs10869 SYNGR4 23546 19 53571289 NM_012451 NP_036583 C/T T203A minus 13042 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 120 by freq 19q13.3 synaptogyrin 4 2545 rs10869 SYNGR4 23546 19 53571289 NM_012451 NP_036583 C/T T203A minus 13042 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 120 by freq 19q13.3 synaptogyrin 4 2546 rs10869 SYNGR4 23546 19 53571289 NM_012451 NP_036583 C/T T203A minus 13042 1303 SEQUENOM CEPH CEPH (92) 92 1 120 by freq 19q13.3 synaptogyrin 4 2547 rs10885 BAT2 7916 6 31712570 NM_004638 NP_004629 C/T P1994S plus 24796277 1303 SEQUENOM CEPH CEPH (92) 184 0.27 123 "by doubleHit,freq,cluster" 6p21.3 HLA-B associated transcript 2 2548 rs10885 BAT2 7916 6 31712570 NM_080686 NP_542417 C/T P2006S plus 24796277 1303 SEQUENOM CEPH CEPH (92) 184 0.27 123 "by doubleHit,freq,cluster" 6p21.3 HLA-B associated transcript 2 2549 rs10963 RBP5 83758 12 7172584 NM_031491 NP_113679 C/T D19N plus 13141 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.32 100 "by cluster,freq" 12p13.31 "retinol binding protein 5, cellular" 2550 rs10963 RBP5 83758 12 7172584 NM_031491 NP_113679 C/T D19N plus 13141 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.23 100 "by cluster,freq" 12p13.31 "retinol binding protein 5, cellular" 2551 rs10963 RBP5 83758 12 7172584 NM_031491 NP_113679 C/T D19N plus 13141 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.47 100 "by cluster,freq" 12p13.31 "retinol binding protein 5, cellular" 2552 rs10963 RBP5 83758 12 7172584 NM_031491 NP_113679 C/T D19N plus 3232032 738 YUSUKE JBIC-ALLELE Japanese (752) 1496 0.4 100 "by cluster,freq" 12p13.31 "retinol binding protein 5, cellular" 2553 rs10988 LARS 51520 5 145480189 NM_020117 NP_064502 C/T R1088K plus 13168 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 123 "HapMap,freq,cluster" 5q32 leucyl-tRNA synthetase 2554 rs10988 LARS 51520 5 145480189 NM_020117 NP_064502 C/T R1088K plus 13168 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.17 123 "HapMap,freq,cluster" 5q32 leucyl-tRNA synthetase 2555 rs10988 LARS 51520 5 145480189 NM_020117 NP_064502 C/T R1088K plus 13168 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.09 123 "HapMap,freq,cluster" 5q32 leucyl-tRNA synthetase 2556 rs10988 LARS 51520 5 145480189 NM_020117 NP_064502 C/T R1088K plus 13168 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.24 123 "HapMap,freq,cluster" 5q32 leucyl-tRNA synthetase 2557 rs10988 LARS 51520 5 145480189 NM_020117 NP_064502 C/T R1088K plus 4949406 738 YUSUKE JBIC-ALLELE Japanese (752) 1088 0.22 123 "HapMap,freq,cluster" 5q32 leucyl-tRNA synthetase 2558 rs10988 LARS 51520 5 145480189 NM_020117 NP_064502 C/T R1088K plus 4949406 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.29 123 "HapMap,freq,cluster" 5q32 leucyl-tRNA synthetase 2559 rs10988 LARS 51520 5 145480189 NM_020117 NP_064502 C/T R1088K plus 4949406 1303 SEQUENOM CEPH CEPH (92) 92 0.24 123 "HapMap,freq,cluster" 5q32 leucyl-tRNA synthetase 2560 rs10988 LARS 51520 5 145480189 NM_020117 NP_064502 C/T R1088K plus 24351928 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.38 123 "HapMap,freq,cluster" 5q32 leucyl-tRNA synthetase 2561 rs10988 LARS 51520 5 145480189 NM_020117 NP_064502 C/T R1088K plus 24351928 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "HapMap,freq,cluster" 5q32 leucyl-tRNA synthetase 2562 rs10988 LARS 51520 5 145480189 NM_020117 NP_064502 C/T R1088K plus 24351928 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.21 123 "HapMap,freq,cluster" 5q32 leucyl-tRNA synthetase 2563 rs11106 MKI67 4288 10 129789768 NM_002417 NP_002408 C/G T3150S minus 13291 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.43 121 "by doubleHit,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 2564 rs11106 MKI67 4288 10 129789768 NM_002417 NP_002408 C/G T3150S minus 1525715 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.46 121 "by doubleHit,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 2565 rs11106 MKI67 4288 10 129789768 NM_002417 NP_002408 C/G T3150S minus 1525715 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.45 121 "by doubleHit,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 2566 rs11106 MKI67 4288 10 129789768 NM_002417 NP_002408 C/G T3150S minus 1525715 640 TSC-CSHL TSC_42_A TSC Asian (42) 42 0.5 121 "by doubleHit,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 2567 rs11106 MKI67 4288 10 129789768 NM_002417 NP_002408 C/G T3150S minus 10583404 1303 SEQUENOM CEPH CEPH (92) 92 0.42 121 "by doubleHit,freq,cluster" 10q25-qter antigen identified by monoclonal antibody Ki-67 2568 rs11127 GNLY 10578 2 85836387 NM_006433 NP_006424 C/T T119I plus 13313 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.34 123 "HapMap,doubleHit,submitter,freq,cluster" 2p12-q11 granulysin 2569 rs11127 GNLY 10578 2 85836387 NM_006433 NP_006424 C/T T119I plus 13313 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.43 123 "HapMap,doubleHit,submitter,freq,cluster" 2p12-q11 granulysin 2570 rs11127 GNLY 10578 2 85836387 NM_006433 NP_006424 C/T T119I plus 1529930 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.15 123 "HapMap,doubleHit,submitter,freq,cluster" 2p12-q11 granulysin 2571 rs11127 GNLY 10578 2 85836387 NM_006433 NP_006424 C/T T119I plus 1529930 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 2p12-q11 granulysin 2572 rs11127 GNLY 10578 2 85836387 NM_006433 NP_006424 C/T T119I plus 1529930 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.47 123 "HapMap,doubleHit,submitter,freq,cluster" 2p12-q11 granulysin 2573 rs11127 GNLY 10578 2 85836387 NM_006433 NP_006424 C/T T119I plus 14477154 1303 SEQUENOM CEPH CEPH (92) 92 0.34 123 "HapMap,doubleHit,submitter,freq,cluster" 2p12-q11 granulysin 2574 rs11127 GNLY 10578 2 85836387 NM_006433 NP_006424 C/T T119I plus 24152003 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 2p12-q11 granulysin 2575 rs11127 GNLY 10578 2 85836387 NM_006433 NP_006424 C/T T119I plus 24152003 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "HapMap,doubleHit,submitter,freq,cluster" 2p12-q11 granulysin 2576 rs11127 GNLY 10578 2 85836387 NM_006433 NP_006424 C/T T119I plus 24152003 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.31 123 "HapMap,doubleHit,submitter,freq,cluster" 2p12-q11 granulysin 2577 rs11159 RNASET2 8635 6 167313552 NM_003730 NP_003721 C/T R236W minus 13347 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.04 123 "HapMap,freq,cluster" 6q27 ribonuclease T2 2578 rs11159 RNASET2 8635 6 167313552 NM_003730 NP_003721 C/T R236W minus 13347 1303 SEQUENOM CEPH CEPH (92) 92 0.01 123 "HapMap,freq,cluster" 6q27 ribonuclease T2 2579 rs11159 RNASET2 8635 6 167313552 NM_003730 NP_003721 C/T R236W minus 1512972 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.27 123 "HapMap,freq,cluster" 6q27 ribonuclease T2 2580 rs11159 RNASET2 8635 6 167313552 NM_003730 NP_003721 C/T R236W minus 1512972 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.21 123 "HapMap,freq,cluster" 6q27 ribonuclease T2 2581 rs11159 RNASET2 8635 6 167313552 NM_003730 NP_003721 C/T R236W minus 1512972 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.16 123 "HapMap,freq,cluster" 6q27 ribonuclease T2 2582 rs11159 RNASET2 8635 6 167313552 NM_003730 NP_003721 C/T R236W minus 3241107 738 YUSUKE JBIC-ALLELE Japanese (752) 1496 0.03 123 "HapMap,freq,cluster" 6q27 ribonuclease T2 2583 rs11159 RNASET2 8635 6 167313552 NM_003730 NP_003721 C/T R236W minus 24146236 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "HapMap,freq,cluster" 6q27 ribonuclease T2 2584 rs11159 RNASET2 8635 6 167313552 NM_003730 NP_003721 C/T R236W minus 24146236 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.11 123 "HapMap,freq,cluster" 6q27 ribonuclease T2 2585 rs11159 RNASET2 8635 6 167313552 NM_003730 NP_003721 C/T R236W minus 24146236 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.13 123 "HapMap,freq,cluster" 6q27 ribonuclease T2 2586 rs11177 NS 26354 3 52696345 NM_014366 NP_055181 C/T R39Q minus 13366 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.34 120 "by doubleHit,freq,cluster" 3p21.31 nucleostemin 2587 rs11177 NS 26354 3 52696345 NM_014366 NP_055181 C/T R39Q minus 1374181 1303 SEQUENOM CEPH CEPH (92) 92 0.34 120 "by doubleHit,freq,cluster" 3p21.31 nucleostemin 2588 rs11177 NS 26354 3 52696345 NM_014366 NP_055181 C/T R39Q minus 3251549 738 YUSUKE JBIC-ALLELE Japanese (752) 1468 0.5 120 "by doubleHit,freq,cluster" 3p21.31 nucleostemin 2589 rs11177 NS 26354 3 52696345 NM_206825 NP_996561 C/T R27Q minus 13366 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.34 120 "by doubleHit,freq,cluster" 3p21.31 nucleostemin 2590 rs11177 NS 26354 3 52696345 NM_206825 NP_996561 C/T R27Q minus 1374181 1303 SEQUENOM CEPH CEPH (92) 92 0.34 120 "by doubleHit,freq,cluster" 3p21.31 nucleostemin 2591 rs11177 NS 26354 3 52696345 NM_206825 NP_996561 C/T R27Q minus 3251549 738 YUSUKE JBIC-ALLELE Japanese (752) 1468 0.5 120 "by doubleHit,freq,cluster" 3p21.31 nucleostemin 2592 rs11177 NS 26354 3 52696345 NM_206826 NP_996562 C/T R27Q minus 13366 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.34 120 "by doubleHit,freq,cluster" 3p21.31 nucleostemin 2593 rs11177 NS 26354 3 52696345 NM_206826 NP_996562 C/T R27Q minus 1374181 1303 SEQUENOM CEPH CEPH (92) 92 0.34 120 "by doubleHit,freq,cluster" 3p21.31 nucleostemin 2594 rs11177 NS 26354 3 52696345 NM_206826 NP_996562 C/T R27Q minus 3251549 738 YUSUKE JBIC-ALLELE Japanese (752) 1468 0.5 120 "by doubleHit,freq,cluster" 3p21.31 nucleostemin 2595 rs11250 CENPC1 1060 4 68208981 NM_001812 NP_001803 C/T L341F minus 5528842 1303 SEQUENOM CEPH CEPH (92) 92 0.35 121 "by doubleHit,freq,cluster" 4q12-q13.3 centromere protein C 1 2596 rs11276 DO 420 12 14884706 NM_021071 NP_066549 A/G D265N minus 13474 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.39 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13.2-q13.3 Dombrock blood group 2597 rs11276 DO 420 12 14884706 NM_021071 NP_066549 A/G D265N minus 11055362 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.36 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13.2-q13.3 Dombrock blood group 2598 rs11276 DO 420 12 14884706 NM_021071 NP_066549 A/G D265N minus 11055362 1303 SEQUENOM CEPH CEPH (92) 92 0.39 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13.2-q13.3 Dombrock blood group 2599 rs11276 DO 420 12 14884706 NM_021071 NP_066549 A/G D265N minus 24435404 1371 PERLEGEN AFD_EUR_PANEL European American (24) 42 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13.2-q13.3 Dombrock blood group 2600 rs11276 DO 420 12 14884706 NM_021071 NP_066549 A/G D265N minus 24435404 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.2 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13.2-q13.3 Dombrock blood group 2601 rs11276 DO 420 12 14884706 NM_021071 NP_066549 A/G D265N minus 24435404 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.11 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13.2-q13.3 Dombrock blood group 2602 rs11357 MTIF2 4528 2 55381766 NM_002453 NP_002444 A/G V556I minus 13561 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.15 121 "by doubleHit,freq,cluster" 2p14-p16 mitochondrial translational initiation factor 2 2603 rs11357 MTIF2 4528 2 55381766 NM_002453 NP_002444 A/G V556I minus 3177497 619 WICVAR MITOGPOP6 CORIELL Mixed 52 0.37 121 "by doubleHit,freq,cluster" 2p14-p16 mitochondrial translational initiation factor 2 2604 rs11435 SH3RF2 153769 5 145422326 NM_152550 NP_689763 A/G V687I plus 4174146 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.19 123 "HapMap,doubleHit,freq,cluster" 5q32 SH3 domain containing ring finger 2 2605 rs11435 SH3RF2 153769 5 145422326 NM_152550 NP_689763 A/G V687I plus 4174146 1303 SEQUENOM CEPH CEPH (92) 92 0.1 123 "HapMap,doubleHit,freq,cluster" 5q32 SH3 domain containing ring finger 2 2606 rs11435 SH3RF2 153769 5 145422326 NM_152550 NP_689763 A/G V687I plus 24136232 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.13 123 "HapMap,doubleHit,freq,cluster" 5q32 SH3 domain containing ring finger 2 2607 rs11435 SH3RF2 153769 5 145422326 NM_152550 NP_689763 A/G V687I plus 24136232 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "HapMap,doubleHit,freq,cluster" 5q32 SH3 domain containing ring finger 2 2608 rs11435 SH3RF2 153769 5 145422326 NM_152550 NP_689763 A/G V687I plus 24136232 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "HapMap,doubleHit,freq,cluster" 5q32 SH3 domain containing ring finger 2 2609 rs11474 AKR1C2 1646 10 5030884 NM_001354 NP_001345 A/T F168Y plus 13684 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.33 108 by freq 10p15-p14 "aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)" 2610 rs11474 AKR1C2 1646 10 5030884 NM_205845 NP_995317 A/T F168Y plus 13684 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.33 108 by freq 10p15-p14 "aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)" 2611 rs11479 ECGF1 1890 22 49254380 NM_001953 NP_001944 C/T S471L minus 13689 1303 SEQUENOM CEPH CEPH (92) 92 0.05 123 "by cluster,freq" 22q13.33 endothelial cell growth factor 1 (platelet-derived) 2612 rs11499 FXR1 8087 3 182176757 NM_005087 NP_005078 C/T A614V plus 13713 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.39 123 by freq 3q28 "fragile X mental retardation, autosomal homolog 1" 2613 rs11499 FXR1 8087 3 182176757 NM_005087 NP_005078 C/T A614V plus 13713 1303 SEQUENOM CEPH CEPH (92) 92 0.39 123 by freq 3q28 "fragile X mental retardation, autosomal homolog 1" 2614 rs11502 IRF2BP2 359948 1 231051215 NM_182972 NP_892017 C/T A254V minus 4428767 1303 SEQUENOM CEPH CEPH (92) 92 0.35 123 by freq 1q42.3 interferon regulatory factor 2 binding protein 2 2615 rs11551 FBLN1 2192 22 44279529 NM_001996 NP_001987 G/T R633L plus 13769 1303 SEQUENOM CEPH CEPH (92) 92 0.12 120 by freq 22q13.31 fibulin 1 2616 rs11574 ID3 3399 1 23630804 NM_002167 NP_002158 A/G T105A minus 13793 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.2 121 "HapMap,doubleHit,submitter,freq,cluster" 1p36.13-p36.12 "inhibitor of DNA binding 3, dominant negative helix-loop-helix protein" 2617 rs11574 ID3 3399 1 23630804 NM_002167 NP_002158 A/G T105A minus 3069953 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.28 121 "HapMap,doubleHit,submitter,freq,cluster" 1p36.13-p36.12 "inhibitor of DNA binding 3, dominant negative helix-loop-helix protein" 2618 rs11607 MBTPS1 8720 16 82645548 NM_201268 NP_957720 A/G S627N minus 13830 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.39 121 "HapMap,doubleHit,freq,cluster" 16q24 "membrane-bound transcription factor protease, site 1" 2619 rs11607 MBTPS1 8720 16 82645548 NM_201268 NP_957720 A/G S627N minus 3217930 738 YUSUKE JBIC-ALLELE Japanese (752) 1120 0.42 121 "HapMap,doubleHit,freq,cluster" 16q24 "membrane-bound transcription factor protease, site 1" 2620 rs11607 MBTPS1 8720 16 82645548 NM_201268 NP_957720 A/G S627N minus 19343224 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.31 121 "HapMap,doubleHit,freq,cluster" 16q24 "membrane-bound transcription factor protease, site 1" 2621 rs11746 FREB 84824 1 158414794 NM_032738 NP_116127 A/G R349Q plus 13980 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.44 123 "by doubleHit,freq,cluster" 1q23.1 Fc receptor homolog expressed in B cells 2622 rs11746 FREB 84824 1 158414794 NM_032738 NP_116127 A/G R349Q plus 1291097 1303 SEQUENOM CEPH CEPH (92) 92 0.44 123 "by doubleHit,freq,cluster" 1q23.1 Fc receptor homolog expressed in B cells 2623 rs11746 FREB 84824 1 158414794 NM_032738 NP_116127 A/G R349Q plus 24244157 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.46 123 "by doubleHit,freq,cluster" 1q23.1 Fc receptor homolog expressed in B cells 2624 rs11746 FREB 84824 1 158414794 NM_032738 NP_116127 A/G R349Q plus 24244157 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.2 123 "by doubleHit,freq,cluster" 1q23.1 Fc receptor homolog expressed in B cells 2625 rs11746 FREB 84824 1 158414794 NM_032738 NP_116127 A/G R349Q plus 24244157 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.25 123 "by doubleHit,freq,cluster" 1q23.1 Fc receptor homolog expressed in B cells 2626 rs11989 Magmas 51025 16 4330359 NM_016069 NP_057153 G/T Q114K plus 2986040 738 YUSUKE JBIC-ALLELE Japanese (752) 1470 0.11 96 "HapMap,freq,cluster" 16p13.3 mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction 2627 rs11989 Magmas 51025 16 4330359 NM_016069 NP_057153 G/T Q114K plus 2986040 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.04 96 "HapMap,freq,cluster" 16p13.3 mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction 2628 rs11989 Magmas 51025 16 4330359 NM_016069 NP_057153 G/T Q114K plus 2986040 1303 SEQUENOM CEPH CEPH (92) 92 0.05 96 "HapMap,freq,cluster" 16p13.3 mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction 2629 rs12075 FY 2532 1 155988427 NM_002036 NP_002027 A/G G42D plus 14327 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.5 121 "by doubleHit,freq,cluster" 1q21-q22 Duffy blood group 2630 rs12075 FY 2532 1 155988427 NM_002036 NP_002027 A/G G42D plus 2580084 1303 SEQUENOM CEPH CEPH (92) 46 0.5 121 "by doubleHit,freq,cluster" 1q21-q22 Duffy blood group 2631 rs12110 FXYD5 53827 19 40352348 NM_014164 NP_054883 A/G R176H plus 2518485 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.21 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2632 rs12110 FXYD5 53827 19 40352348 NM_014164 NP_054883 A/G R176H plus 2518485 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 1 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2633 rs12110 FXYD5 53827 19 40352348 NM_014164 NP_054883 A/G R176H plus 2518485 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 2 1 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2634 rs12110 FXYD5 53827 19 40352348 NM_014164 NP_054883 A/G R176H plus 2518485 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 190 0.16 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2635 rs12110 FXYD5 53827 19 40352348 NM_014164 NP_054883 A/G R176H plus 3225658 738 YUSUKE JBIC-ALLELE Japanese (752) 1232 0.13 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2636 rs12110 FXYD5 53827 19 40352348 NM_014164 NP_054883 A/G R176H plus 24567925 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2637 rs12110 FXYD5 53827 19 40352348 NM_014164 NP_054883 A/G R176H plus 24567925 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2638 rs12110 FXYD5 53827 19 40352348 NM_014164 NP_054883 A/G R176H plus 24567925 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.2 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2639 rs12110 FXYD5 53827 19 40352348 NM_144779 NP_659003 A/G R176H plus 2518485 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.21 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2640 rs12110 FXYD5 53827 19 40352348 NM_144779 NP_659003 A/G R176H plus 2518485 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 1 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2641 rs12110 FXYD5 53827 19 40352348 NM_144779 NP_659003 A/G R176H plus 2518485 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 2 1 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2642 rs12110 FXYD5 53827 19 40352348 NM_144779 NP_659003 A/G R176H plus 2518485 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 190 0.16 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2643 rs12110 FXYD5 53827 19 40352348 NM_144779 NP_659003 A/G R176H plus 3225658 738 YUSUKE JBIC-ALLELE Japanese (752) 1232 0.13 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2644 rs12110 FXYD5 53827 19 40352348 NM_144779 NP_659003 A/G R176H plus 24567925 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2645 rs12110 FXYD5 53827 19 40352348 NM_144779 NP_659003 A/G R176H plus 24567925 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2646 rs12110 FXYD5 53827 19 40352348 NM_144779 NP_659003 A/G R176H plus 24567925 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.2 123 "by doubleHit,freq,cluster" 19q12-q13.1 FXYD domain containing ion transport regulator 5 2647 rs12125 RAB34 83871 17 24066192 NM_031934 NP_114140 C/G V197L plus 14380 638 TSC-CSHL TSC_42_AA TSC African American (42) 83 0.11 52 by freq 17q11.2 "RAB34, member RAS oncogene family" 2648 rs12125 RAB34 83871 17 24066192 NM_031934 NP_114140 C/G V197L plus 14380 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 52 by freq 17q11.2 "RAB34, member RAS oncogene family" 2649 rs12125 RAB34 83871 17 24066192 NM_031934 NP_114140 C/G V197L plus 14380 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 52 by freq 17q11.2 "RAB34, member RAS oncogene family" 2650 rs12157 WINS1 55180 15 98927317 NM_018148 NP_060618 C/G E641D minus 14412 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.47 123 "by doubleHit,freq,cluster" 15q26.3 WINS1 protein with Drosophila Lines (Lin) homologous domain 2651 rs12157 WINS1 55180 15 98927317 NM_018148 NP_060618 C/G E641D minus 10782196 1303 SEQUENOM CEPH CEPH (92) 93 0.47 123 "by doubleHit,freq,cluster" 15q26.3 WINS1 protein with Drosophila Lines (Lin) homologous domain 2652 rs12157 WINS1 55180 15 98927317 NM_018148 NP_060618 C/G E641D minus 24595387 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.46 123 "by doubleHit,freq,cluster" 15q26.3 WINS1 protein with Drosophila Lines (Lin) homologous domain 2653 rs12157 WINS1 55180 15 98927317 NM_018148 NP_060618 C/G E641D minus 24595387 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.26 123 "by doubleHit,freq,cluster" 15q26.3 WINS1 protein with Drosophila Lines (Lin) homologous domain 2654 rs12157 WINS1 55180 15 98927317 NM_018148 NP_060618 C/G E641D minus 24595387 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.25 123 "by doubleHit,freq,cluster" 15q26.3 WINS1 protein with Drosophila Lines (Lin) homologous domain 2655 rs12281 HDLBP 3069 2 241889022 NM_005336 NP_005327 G/T W1264L minus 14547 1303 SEQUENOM CEPH CEPH (92) 92 0.02 52 by freq 2q37 high density lipoprotein binding protein (vigilin) 2656 rs12281 HDLBP 3069 2 241889022 NM_203346 NP_976221 G/T W1264L minus 14547 1303 SEQUENOM CEPH CEPH (92) 92 0.02 52 by freq 2q37 high density lipoprotein binding protein (vigilin) 2657 rs12338 CTSB 1508 8 11748297 NM_001908 NP_001899 C/G L26V minus 14608 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.32 123 "by cluster,freq" 8p22 cathepsin B 2658 rs12338 CTSB 1508 8 11748297 NM_001908 NP_001899 C/G L26V minus 20183 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.33 123 "by cluster,freq" 8p22 cathepsin B 2659 rs12338 CTSB 1508 8 11748297 NM_001908 NP_001899 C/G L26V minus 1457603 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 82 0.43 123 "by cluster,freq" 8p22 cathepsin B 2660 rs12338 CTSB 1508 8 11748297 NM_001908 NP_001899 C/G L26V minus 1457603 771 TSC-CSHL SC_12_A CORIELL Asian (12) 12 0.5 123 "by cluster,freq" 8p22 cathepsin B 2661 rs12338 CTSB 1508 8 11748297 NM_001908 NP_001899 C/G L26V minus 1457603 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.33 123 "by cluster,freq" 8p22 cathepsin B 2662 rs12338 CTSB 1508 8 11748297 NM_001908 NP_001899 C/G L26V minus 1457603 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.14 123 "by cluster,freq" 8p22 cathepsin B 2663 rs12338 CTSB 1508 8 11748297 NM_001908 NP_001899 C/G L26V minus 1457603 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 90 0.37 123 "by cluster,freq" 8p22 cathepsin B 2664 rs12338 CTSB 1508 8 11748297 NM_001908 NP_001899 C/G L26V minus 3207978 738 YUSUKE JBIC-ALLELE Japanese (752) 1464 0.49 123 "by cluster,freq" 8p22 cathepsin B 2665 rs12338 CTSB 1508 8 11748297 NM_001908 NP_001899 C/G L26V minus 5682552 1303 SEQUENOM CEPH CEPH (92) 92 0.32 123 "by cluster,freq" 8p22 cathepsin B 2666 rs12338 CTSB 1508 8 11748297 NM_001908 NP_001899 C/G L26V minus 23967647 1371 PERLEGEN AFD_EUR_PANEL European American (24) 42 0.33 123 "by cluster,freq" 8p22 cathepsin B 2667 rs12338 CTSB 1508 8 11748297 NM_001908 NP_001899 C/G L26V minus 23967647 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.29 123 "by cluster,freq" 8p22 cathepsin B 2668 rs12338 CTSB 1508 8 11748297 NM_001908 NP_001899 C/G L26V minus 23967647 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.45 123 "by cluster,freq" 8p22 cathepsin B 2669 rs12338 CTSB 1508 8 11748297 NM_147780 NP_680090 C/G L26V minus 14608 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.32 123 "by cluster,freq" 8p22 cathepsin B 2670 rs12338 CTSB 1508 8 11748297 NM_147780 NP_680090 C/G L26V minus 20183 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.33 123 "by cluster,freq" 8p22 cathepsin B 2671 rs12338 CTSB 1508 8 11748297 NM_147780 NP_680090 C/G L26V minus 1457603 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 82 0.43 123 "by cluster,freq" 8p22 cathepsin B 2672 rs12338 CTSB 1508 8 11748297 NM_147780 NP_680090 C/G L26V minus 1457603 771 TSC-CSHL SC_12_A CORIELL Asian (12) 12 0.5 123 "by cluster,freq" 8p22 cathepsin B 2673 rs12338 CTSB 1508 8 11748297 NM_147780 NP_680090 C/G L26V minus 1457603 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.33 123 "by cluster,freq" 8p22 cathepsin B 2674 rs12338 CTSB 1508 8 11748297 NM_147780 NP_680090 C/G L26V minus 1457603 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.14 123 "by cluster,freq" 8p22 cathepsin B 2675 rs12338 CTSB 1508 8 11748297 NM_147780 NP_680090 C/G L26V minus 1457603 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 90 0.37 123 "by cluster,freq" 8p22 cathepsin B 2676 rs12338 CTSB 1508 8 11748297 NM_147780 NP_680090 C/G L26V minus 3207978 738 YUSUKE JBIC-ALLELE Japanese (752) 1464 0.49 123 "by cluster,freq" 8p22 cathepsin B 2677 rs12338 CTSB 1508 8 11748297 NM_147780 NP_680090 C/G L26V minus 5682552 1303 SEQUENOM CEPH CEPH (92) 92 0.32 123 "by cluster,freq" 8p22 cathepsin B 2678 rs12338 CTSB 1508 8 11748297 NM_147780 NP_680090 C/G L26V minus 23967647 1371 PERLEGEN AFD_EUR_PANEL European American (24) 42 0.33 123 "by cluster,freq" 8p22 cathepsin B 2679 rs12338 CTSB 1508 8 11748297 NM_147780 NP_680090 C/G L26V minus 23967647 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.29 123 "by cluster,freq" 8p22 cathepsin B 2680 rs12338 CTSB 1508 8 11748297 NM_147780 NP_680090 C/G L26V minus 23967647 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.45 123 "by cluster,freq" 8p22 cathepsin B 2681 rs12338 CTSB 1508 8 11748297 NM_147781 NP_680091 C/G L26V minus 14608 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.32 123 "by cluster,freq" 8p22 cathepsin B 2682 rs12338 CTSB 1508 8 11748297 NM_147781 NP_680091 C/G L26V minus 20183 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.33 123 "by cluster,freq" 8p22 cathepsin B 2683 rs12338 CTSB 1508 8 11748297 NM_147781 NP_680091 C/G L26V minus 1457603 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 82 0.43 123 "by cluster,freq" 8p22 cathepsin B 2684 rs12338 CTSB 1508 8 11748297 NM_147781 NP_680091 C/G L26V minus 1457603 771 TSC-CSHL SC_12_A CORIELL Asian (12) 12 0.5 123 "by cluster,freq" 8p22 cathepsin B 2685 rs12338 CTSB 1508 8 11748297 NM_147781 NP_680091 C/G L26V minus 1457603 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.33 123 "by cluster,freq" 8p22 cathepsin B 2686 rs12338 CTSB 1508 8 11748297 NM_147781 NP_680091 C/G L26V minus 1457603 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.14 123 "by cluster,freq" 8p22 cathepsin B 2687 rs12338 CTSB 1508 8 11748297 NM_147781 NP_680091 C/G L26V minus 1457603 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 90 0.37 123 "by cluster,freq" 8p22 cathepsin B 2688 rs12338 CTSB 1508 8 11748297 NM_147781 NP_680091 C/G L26V minus 3207978 738 YUSUKE JBIC-ALLELE Japanese (752) 1464 0.49 123 "by cluster,freq" 8p22 cathepsin B 2689 rs12338 CTSB 1508 8 11748297 NM_147781 NP_680091 C/G L26V minus 5682552 1303 SEQUENOM CEPH CEPH (92) 92 0.32 123 "by cluster,freq" 8p22 cathepsin B 2690 rs12338 CTSB 1508 8 11748297 NM_147781 NP_680091 C/G L26V minus 23967647 1371 PERLEGEN AFD_EUR_PANEL European American (24) 42 0.33 123 "by cluster,freq" 8p22 cathepsin B 2691 rs12338 CTSB 1508 8 11748297 NM_147781 NP_680091 C/G L26V minus 23967647 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.29 123 "by cluster,freq" 8p22 cathepsin B 2692 rs12338 CTSB 1508 8 11748297 NM_147781 NP_680091 C/G L26V minus 23967647 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.45 123 "by cluster,freq" 8p22 cathepsin B 2693 rs12338 CTSB 1508 8 11748297 NM_147782 NP_680092 C/G L26V minus 14608 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.32 123 "by cluster,freq" 8p22 cathepsin B 2694 rs12338 CTSB 1508 8 11748297 NM_147782 NP_680092 C/G L26V minus 20183 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.33 123 "by cluster,freq" 8p22 cathepsin B 2695 rs12338 CTSB 1508 8 11748297 NM_147782 NP_680092 C/G L26V minus 1457603 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 82 0.43 123 "by cluster,freq" 8p22 cathepsin B 2696 rs12338 CTSB 1508 8 11748297 NM_147782 NP_680092 C/G L26V minus 1457603 771 TSC-CSHL SC_12_A CORIELL Asian (12) 12 0.5 123 "by cluster,freq" 8p22 cathepsin B 2697 rs12338 CTSB 1508 8 11748297 NM_147782 NP_680092 C/G L26V minus 1457603 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.33 123 "by cluster,freq" 8p22 cathepsin B 2698 rs12338 CTSB 1508 8 11748297 NM_147782 NP_680092 C/G L26V minus 1457603 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.14 123 "by cluster,freq" 8p22 cathepsin B 2699 rs12338 CTSB 1508 8 11748297 NM_147782 NP_680092 C/G L26V minus 1457603 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 90 0.37 123 "by cluster,freq" 8p22 cathepsin B 2700 rs12338 CTSB 1508 8 11748297 NM_147782 NP_680092 C/G L26V minus 3207978 738 YUSUKE JBIC-ALLELE Japanese (752) 1464 0.49 123 "by cluster,freq" 8p22 cathepsin B 2701 rs12338 CTSB 1508 8 11748297 NM_147782 NP_680092 C/G L26V minus 5682552 1303 SEQUENOM CEPH CEPH (92) 92 0.32 123 "by cluster,freq" 8p22 cathepsin B 2702 rs12338 CTSB 1508 8 11748297 NM_147782 NP_680092 C/G L26V minus 23967647 1371 PERLEGEN AFD_EUR_PANEL European American (24) 42 0.33 123 "by cluster,freq" 8p22 cathepsin B 2703 rs12338 CTSB 1508 8 11748297 NM_147782 NP_680092 C/G L26V minus 23967647 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.29 123 "by cluster,freq" 8p22 cathepsin B 2704 rs12338 CTSB 1508 8 11748297 NM_147782 NP_680092 C/G L26V minus 23967647 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.45 123 "by cluster,freq" 8p22 cathepsin B 2705 rs12338 CTSB 1508 8 11748297 NM_147783 NP_680093 C/G L26V minus 14608 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.32 123 "by cluster,freq" 8p22 cathepsin B 2706 rs12338 CTSB 1508 8 11748297 NM_147783 NP_680093 C/G L26V minus 20183 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.33 123 "by cluster,freq" 8p22 cathepsin B 2707 rs12338 CTSB 1508 8 11748297 NM_147783 NP_680093 C/G L26V minus 1457603 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 82 0.43 123 "by cluster,freq" 8p22 cathepsin B 2708 rs12338 CTSB 1508 8 11748297 NM_147783 NP_680093 C/G L26V minus 1457603 771 TSC-CSHL SC_12_A CORIELL Asian (12) 12 0.5 123 "by cluster,freq" 8p22 cathepsin B 2709 rs12338 CTSB 1508 8 11748297 NM_147783 NP_680093 C/G L26V minus 1457603 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.33 123 "by cluster,freq" 8p22 cathepsin B 2710 rs12338 CTSB 1508 8 11748297 NM_147783 NP_680093 C/G L26V minus 1457603 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.14 123 "by cluster,freq" 8p22 cathepsin B 2711 rs12338 CTSB 1508 8 11748297 NM_147783 NP_680093 C/G L26V minus 1457603 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 90 0.37 123 "by cluster,freq" 8p22 cathepsin B 2712 rs12338 CTSB 1508 8 11748297 NM_147783 NP_680093 C/G L26V minus 3207978 738 YUSUKE JBIC-ALLELE Japanese (752) 1464 0.49 123 "by cluster,freq" 8p22 cathepsin B 2713 rs12338 CTSB 1508 8 11748297 NM_147783 NP_680093 C/G L26V minus 5682552 1303 SEQUENOM CEPH CEPH (92) 92 0.32 123 "by cluster,freq" 8p22 cathepsin B 2714 rs12338 CTSB 1508 8 11748297 NM_147783 NP_680093 C/G L26V minus 23967647 1371 PERLEGEN AFD_EUR_PANEL European American (24) 42 0.33 123 "by cluster,freq" 8p22 cathepsin B 2715 rs12338 CTSB 1508 8 11748297 NM_147783 NP_680093 C/G L26V minus 23967647 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.29 123 "by cluster,freq" 8p22 cathepsin B 2716 rs12338 CTSB 1508 8 11748297 NM_147783 NP_680093 C/G L26V minus 23967647 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.45 123 "by cluster,freq" 8p22 cathepsin B 2717 rs12505 CKB 1152 14 103056022 NM_001823 NP_001814 C/T L360F minus 24796478 1303 SEQUENOM CEPH CEPH (92) 184 0.41 123 by freq 14q32 "creatine kinase, brain" 2718 rs12529 AKR1C3 8644 10 5126651 NM_003739 NP_003730 C/G H5Q plus 14808 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.4 121 "by doubleHit,freq,cluster" 10p15-p14 "aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)" 2719 rs12529 AKR1C3 8644 10 5126651 NM_003739 NP_003730 C/G H5Q plus 2827711 638 TSC-CSHL TSC_42_AA TSC African American (42) 83 0.43 121 "by doubleHit,freq,cluster" 10p15-p14 "aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)" 2720 rs12529 AKR1C3 8644 10 5126651 NM_003739 NP_003730 C/G H5Q plus 2827711 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 42 0.5 121 "by doubleHit,freq,cluster" 10p15-p14 "aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)" 2721 rs12529 AKR1C3 8644 10 5126651 NM_003739 NP_003730 C/G H5Q plus 2827711 640 TSC-CSHL TSC_42_A TSC Asian (42) 83 0.05 121 "by doubleHit,freq,cluster" 10p15-p14 "aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)" 2722 rs12529 AKR1C3 8644 10 5126651 NM_003739 NP_003730 C/G H5Q plus 2827711 1303 SEQUENOM CEPH CEPH (92) 93 0.4 121 "by doubleHit,freq,cluster" 10p15-p14 "aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)" 2723 rs12529 AKR1C3 8644 10 5126651 NM_003739 NP_003730 C/G H5Q plus 3243083 738 YUSUKE JBIC-ALLELE Japanese (752) 1484 0.11 121 "by doubleHit,freq,cluster" 10p15-p14 "aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)" 2724 rs12529 AKR1C3 8644 10 5126651 NM_003739 NP_003730 C/G H5Q plus 6903636 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.45 121 "by doubleHit,freq,cluster" 10p15-p14 "aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)" 2725 rs12529 AKR1C3 8644 10 5126651 NM_003739 NP_003730 C/G H5Q plus 6903636 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.39 121 "by doubleHit,freq,cluster" 10p15-p14 "aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)" 2726 rs12529 AKR1C3 8644 10 5126651 NM_003739 NP_003730 C/G H5Q plus 6903636 776 SNP500CANCER AFR1 African / African-American (24) 48 0.46 121 "by doubleHit,freq,cluster" 10p15-p14 "aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)" 2727 rs12529 AKR1C3 8644 10 5126651 NM_003739 NP_003730 C/G H5Q plus 6903636 777 SNP500CANCER HISP1 Hispanic (23) 46 0.48 121 "by doubleHit,freq,cluster" 10p15-p14 "aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)" 2728 rs12529 AKR1C3 8644 10 5126651 NM_003739 NP_003730 C/G H5Q plus 6903636 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.1 121 "by doubleHit,freq,cluster" 10p15-p14 "aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)" 2729 rs12584 RBAF600 23352 1 19158567 NM_020765 NP_065816 A/T M4867L minus 14868 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.35 121 "by doubleHit,freq,cluster" 1p36.13 retinoblastoma-associated factor 600 2730 rs12584 RBAF600 23352 1 19158567 NM_020765 NP_065816 A/T M4867L minus 3209653 738 YUSUKE JBIC-ALLELE Japanese (752) 1504 0.2 121 "by doubleHit,freq,cluster" 1p36.13 retinoblastoma-associated factor 600 2731 rs12584 RBAF600 23352 1 19158567 NM_020765 NP_065816 A/T M4867L minus 20598685 1303 SEQUENOM CEPH CEPH (92) 92 0.35 121 "by doubleHit,freq,cluster" 1p36.13 retinoblastoma-associated factor 600 2732 rs12614 BF 629 6 32022158 NM_001710 NP_001701 C/T R32W plus 5606985 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.17 123 by freq 6p21.3 "B-factor, properdin" 2733 rs12614 BF 629 6 32022158 NM_001710 NP_001701 C/T R32W plus 5606985 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 28 0.07 123 by freq 6p21.3 "B-factor, properdin" 2734 rs12614 BF 629 6 32022158 NM_001710 NP_001701 C/T R32W plus 12674482 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.17 123 by freq 6p21.3 "B-factor, properdin" 2735 rs12614 BF 629 6 32022158 NM_001710 NP_001701 C/T R32W plus 12674482 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.09 123 by freq 6p21.3 "B-factor, properdin" 2736 rs12763 SURF2 6835 9 133256814 NM_017503 NP_059973 A/G S213G plus 15059 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.39 120 "by cluster,freq" 9q34.2 surfeit 2 2737 rs12763 SURF2 6835 9 133256814 NM_017503 NP_059973 A/G S213G plus 1632340 1303 SEQUENOM CEPH CEPH (92) 92 0.39 120 "by cluster,freq" 9q34.2 surfeit 2 2738 rs12763 SURF2 6835 9 133256814 NM_017503 NP_059973 A/G S213G plus 3241038 738 YUSUKE JBIC-ALLELE Japanese (752) 1090 0.3 120 "by cluster,freq" 9q34.2 surfeit 2 2739 rs12770 RANBP2 5903 2 108841187 NM_006267 NP_006258 C/G P1892A minus 15067 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.22 108 by freq 2q12.3 RAN binding protein 2 2740 rs12812 MRPL23 6150 11 1934128 NM_021134 NP_066957 C/T A122T minus 15111 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.16 106 "HapMap,doubleHit,submitter,freq" 11p15.5-p15.4 mitochondrial ribosomal protein L23 2741 rs12812 MRPL23 6150 11 1934128 NM_021134 NP_066957 C/T A122T minus 1738486 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.1 106 "HapMap,doubleHit,submitter,freq" 11p15.5-p15.4 mitochondrial ribosomal protein L23 2742 rs12812 MRPL23 6150 11 1934128 NM_021134 NP_066957 C/T A122T minus 1738486 1303 SEQUENOM CEPH CEPH (92) 92 0.38 106 "HapMap,doubleHit,submitter,freq" 11p15.5-p15.4 mitochondrial ribosomal protein L23 2743 rs12865 BRI3 25798 7 97565195 NM_015379 NP_056194 A/G T123A plus 15167 1303 SEQUENOM CEPH CEPH (92) 92 0.04 121 by freq 7q22.1 brain protein I3 2744 rs12917 MGMT 4255 10 131396273 NM_002412 NP_002403 C/T L84F plus 15222 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.25 123 "by cluster,freq" 10q26 O-6-methylguanine-DNA methyltransferase 2745 rs12917 MGMT 4255 10 131396273 NM_002412 NP_002403 C/T L84F plus 2924003 506 NCBI NIHPDR NIHPDR 810 0.18 123 "by cluster,freq" 10q26 O-6-methylguanine-DNA methyltransferase 2746 rs12917 MGMT 4255 10 131396273 NM_002412 NP_002403 C/T L84F plus 3220975 738 YUSUKE JBIC-ALLELE Japanese (752) 1468 0.12 123 "by cluster,freq" 10q26 O-6-methylguanine-DNA methyltransferase 2747 rs12917 MGMT 4255 10 131396273 NM_002412 NP_002403 C/T L84F plus 5586758 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.12 123 "by cluster,freq" 10q26 O-6-methylguanine-DNA methyltransferase 2748 rs12917 MGMT 4255 10 131396273 NM_002412 NP_002403 C/T L84F plus 5586758 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.11 123 "by cluster,freq" 10q26 O-6-methylguanine-DNA methyltransferase 2749 rs12917 MGMT 4255 10 131396273 NM_002412 NP_002403 C/T L84F plus 5586758 776 SNP500CANCER AFR1 African / African-American (24) 48 0.17 123 "by cluster,freq" 10q26 O-6-methylguanine-DNA methyltransferase 2750 rs12917 MGMT 4255 10 131396273 NM_002412 NP_002403 C/T L84F plus 5586758 777 SNP500CANCER HISP1 Hispanic (23) 46 0.09 123 "by cluster,freq" 10q26 O-6-methylguanine-DNA methyltransferase 2751 rs12917 MGMT 4255 10 131396273 NM_002412 NP_002403 C/T L84F plus 5586758 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.11 123 "by cluster,freq" 10q26 O-6-methylguanine-DNA methyltransferase 2752 rs12917 MGMT 4255 10 131396273 NM_002412 NP_002403 C/T L84F plus 23564520 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.1 123 "by cluster,freq" 10q26 O-6-methylguanine-DNA methyltransferase 2753 rs12917 MGMT 4255 10 131396273 NM_002412 NP_002403 C/T L84F plus 23564520 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.17 123 "by cluster,freq" 10q26 O-6-methylguanine-DNA methyltransferase 2754 rs12917 MGMT 4255 10 131396273 NM_002412 NP_002403 C/T L84F plus 23564520 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.02 123 "by cluster,freq" 10q26 O-6-methylguanine-DNA methyltransferase 2755 rs12960 SPG7 6687 16 88147829 NM_003119 NP_003110 A/G R688Q plus 75236 771 TSC-CSHL SC_12_A CORIELL Asian (12) 18 0.22 123 "by doubleHit,submitter,freq,cluster" 16q24.3 "spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive)" 2756 rs12960 SPG7 6687 16 88147829 NM_003119 NP_003110 A/G R688Q plus 75236 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 20 0.05 123 "by doubleHit,submitter,freq,cluster" 16q24.3 "spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive)" 2757 rs12960 SPG7 6687 16 88147829 NM_003119 NP_003110 A/G R688Q plus 75236 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 12 1 123 "by doubleHit,submitter,freq,cluster" 16q24.3 "spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive)" 2758 rs12960 SPG7 6687 16 88147829 NM_003119 NP_003110 A/G R688Q plus 75236 1303 SEQUENOM CEPH CEPH (92) 92 0.14 123 "by doubleHit,submitter,freq,cluster" 16q24.3 "spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive)" 2759 rs12960 SPG7 6687 16 88147829 NM_003119 NP_003110 A/G R688Q plus 24096097 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 "by doubleHit,submitter,freq,cluster" 16q24.3 "spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive)" 2760 rs12960 SPG7 6687 16 88147829 NM_003119 NP_003110 A/G R688Q plus 24096097 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "by doubleHit,submitter,freq,cluster" 16q24.3 "spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive)" 2761 rs12960 SPG7 6687 16 88147829 NM_003119 NP_003110 A/G R688Q plus 24096097 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.15 123 "by doubleHit,submitter,freq,cluster" 16q24.3 "spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive)" 2762 rs13021 PNN 5411 14 38720675 NM_002687 NP_002678 A/G S671G plus 15334 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.12 123 "HapMap,doubleHit,submitter,freq,cluster" 14q13.3 "pinin, desmosome associated protein" 2763 rs13021 PNN 5411 14 38720675 NM_002687 NP_002678 A/G S671G plus 15334 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.08 123 "HapMap,doubleHit,submitter,freq,cluster" 14q13.3 "pinin, desmosome associated protein" 2764 rs13021 PNN 5411 14 38720675 NM_002687 NP_002678 A/G S671G plus 14373749 1303 SEQUENOM CEPH CEPH (92) 92 0.12 123 "HapMap,doubleHit,submitter,freq,cluster" 14q13.3 "pinin, desmosome associated protein" 2765 rs13021 PNN 5411 14 38720675 NM_002687 NP_002678 A/G S671G plus 24112453 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.06 123 "HapMap,doubleHit,submitter,freq,cluster" 14q13.3 "pinin, desmosome associated protein" 2766 rs13021 PNN 5411 14 38720675 NM_002687 NP_002678 A/G S671G plus 24112453 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "HapMap,doubleHit,submitter,freq,cluster" 14q13.3 "pinin, desmosome associated protein" 2767 rs13021 PNN 5411 14 38720675 NM_002687 NP_002678 A/G S671G plus 24112453 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.29 123 "HapMap,doubleHit,submitter,freq,cluster" 14q13.3 "pinin, desmosome associated protein" 2768 rs13043 FAIM 55179 3 139830686 NM_018147 NP_060617 A/G L127S minus 3302358 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by submitter,freq" 3q22.3 Fas apoptotic inhibitory molecule 2769 rs13043 FAIM 55179 3 139830686 NM_018147 NP_060617 A/G L127S minus 23673661 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by submitter,freq" 3q22.3 Fas apoptotic inhibitory molecule 2770 rs13043 FAIM 55179 3 139830686 NM_018147 NP_060617 A/G L127S minus 23673661 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.45 123 "by submitter,freq" 3q22.3 Fas apoptotic inhibitory molecule 2771 rs13043 FAIM 55179 3 139830686 NM_018147 NP_060617 A/G L127S minus 23673661 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by submitter,freq" 3q22.3 Fas apoptotic inhibitory molecule 2772 rs13090 THRAP5 10025 19 819115 NM_005481 NP_005472 A/G E874K minus 15405 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.26 120 "HapMap,doubleHit,freq" 19p13.3 thyroid hormone receptor associated protein 5 2773 rs13090 THRAP5 10025 19 819115 NM_005481 NP_005472 A/G E874K minus 2513099 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.24 120 "HapMap,doubleHit,freq" 19p13.3 thyroid hormone receptor associated protein 5 2774 rs13090 THRAP5 10025 19 819115 NM_005481 NP_005472 A/G E874K minus 2513099 1303 SEQUENOM CEPH CEPH (92) 92 0.26 120 "HapMap,doubleHit,freq" 19p13.3 thyroid hormone receptor associated protein 5 2775 rs13151 RNF149 284996 2 101356930 NM_173647 NP_775918 C/G D356E plus 15469 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.11 123 "by cluster,freq" 2q12.1 ring finger protein 149 2776 rs13151 RNF149 284996 2 101356930 NM_173647 NP_775918 C/G D356E plus 1681722 1303 SEQUENOM CEPH CEPH (92) 92 0.11 123 "by cluster,freq" 2q12.1 ring finger protein 149 2777 rs13151 RNF149 284996 2 101356930 NM_173647 NP_775918 C/G D356E plus 23251898 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.1 123 "by cluster,freq" 2q12.1 ring finger protein 149 2778 rs13151 RNF149 284996 2 101356930 NM_173647 NP_775918 C/G D356E plus 23251898 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.35 123 "by cluster,freq" 2q12.1 ring finger protein 149 2779 rs13151 RNF149 284996 2 101356930 NM_173647 NP_775918 C/G D356E plus 23251898 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 2q12.1 ring finger protein 149 2780 rs13181 ERCC2 2068 19 50546759 NM_000400 NP_000391 G/T K751Q plus 4385756 693 EGP_SNPS PDR90 NIHPDR 162 0.22 123 "by doubleHit,freq" 19q13.3 "excision repair cross-complementing rodent repair deficiency, complementation group 2 (xeroderma pigmentosum D)" 2781 rs13181 ERCC2 2068 19 50546759 NM_000400 NP_000391 G/T K751Q plus 4385756 1303 SEQUENOM CEPH CEPH (92) 92 0.19 123 "by doubleHit,freq" 19q13.3 "excision repair cross-complementing rodent repair deficiency, complementation group 2 (xeroderma pigmentosum D)" 2782 rs13181 ERCC2 2068 19 50546759 NM_000400 NP_000391 G/T K751Q plus 5586504 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.21 123 "by doubleHit,freq" 19q13.3 "excision repair cross-complementing rodent repair deficiency, complementation group 2 (xeroderma pigmentosum D)" 2783 rs13181 ERCC2 2068 19 50546759 NM_000400 NP_000391 G/T K751Q plus 5586504 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.27 123 "by doubleHit,freq" 19q13.3 "excision repair cross-complementing rodent repair deficiency, complementation group 2 (xeroderma pigmentosum D)" 2784 rs13181 ERCC2 2068 19 50546759 NM_000400 NP_000391 G/T K751Q plus 5586504 776 SNP500CANCER AFR1 African / African-American (24) 48 0.17 123 "by doubleHit,freq" 19q13.3 "excision repair cross-complementing rodent repair deficiency, complementation group 2 (xeroderma pigmentosum D)" 2785 rs13181 ERCC2 2068 19 50546759 NM_000400 NP_000391 G/T K751Q plus 5586504 777 SNP500CANCER HISP1 Hispanic (23) 46 0.35 123 "by doubleHit,freq" 19q13.3 "excision repair cross-complementing rodent repair deficiency, complementation group 2 (xeroderma pigmentosum D)" 2786 rs13181 ERCC2 2068 19 50546759 NM_000400 NP_000391 G/T K751Q plus 5586504 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.04 123 "by doubleHit,freq" 19q13.3 "excision repair cross-complementing rodent repair deficiency, complementation group 2 (xeroderma pigmentosum D)" 2787 rs13181 ERCC2 2068 19 50546759 NM_000400 NP_000391 G/T K751Q plus 24431306 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.4 123 "by doubleHit,freq" 19q13.3 "excision repair cross-complementing rodent repair deficiency, complementation group 2 (xeroderma pigmentosum D)" 2788 rs13181 ERCC2 2068 19 50546759 NM_000400 NP_000391 G/T K751Q plus 24431306 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "by doubleHit,freq" 19q13.3 "excision repair cross-complementing rodent repair deficiency, complementation group 2 (xeroderma pigmentosum D)" 2789 rs13181 ERCC2 2068 19 50546759 NM_000400 NP_000391 G/T K751Q plus 24431306 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.1 123 "by doubleHit,freq" 19q13.3 "excision repair cross-complementing rodent repair deficiency, complementation group 2 (xeroderma pigmentosum D)" 2790 rs13294 ECM1 1893 1 147298060 NM_004425 NP_004416 A/G G415S plus 15619 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.42 123 "by doubleHit,freq,cluster" 1q21 extracellular matrix protein 1 2791 rs13294 ECM1 1893 1 147298060 NM_004425 NP_004416 A/G G415S plus 3242326 738 YUSUKE JBIC-ALLELE Japanese (752) 1118 0.3 123 "by doubleHit,freq,cluster" 1q21 extracellular matrix protein 1 2792 rs13294 ECM1 1893 1 147298060 NM_004425 NP_004416 A/G G415S plus 4057396 1303 SEQUENOM CEPH CEPH (92) 92 0.42 123 "by doubleHit,freq,cluster" 1q21 extracellular matrix protein 1 2793 rs13294 ECM1 1893 1 147298060 NM_004425 NP_004416 A/G G415S plus 24275658 1371 PERLEGEN AFD_EUR_PANEL European American (24) 24 0.5 123 "by doubleHit,freq,cluster" 1q21 extracellular matrix protein 1 2794 rs13294 ECM1 1893 1 147298060 NM_004425 NP_004416 A/G G415S plus 24275658 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.2 123 "by doubleHit,freq,cluster" 1q21 extracellular matrix protein 1 2795 rs13294 ECM1 1893 1 147298060 NM_004425 NP_004416 A/G G415S plus 24275658 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.25 123 "by doubleHit,freq,cluster" 1q21 extracellular matrix protein 1 2796 rs13294 ECM1 1893 1 147298060 NM_022664 NP_073155 A/G G290S plus 15619 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.42 123 "by doubleHit,freq,cluster" 1q21 extracellular matrix protein 1 2797 rs13294 ECM1 1893 1 147298060 NM_022664 NP_073155 A/G G290S plus 3242326 738 YUSUKE JBIC-ALLELE Japanese (752) 1118 0.3 123 "by doubleHit,freq,cluster" 1q21 extracellular matrix protein 1 2798 rs13294 ECM1 1893 1 147298060 NM_022664 NP_073155 A/G G290S plus 4057396 1303 SEQUENOM CEPH CEPH (92) 92 0.42 123 "by doubleHit,freq,cluster" 1q21 extracellular matrix protein 1 2799 rs13294 ECM1 1893 1 147298060 NM_022664 NP_073155 A/G G290S plus 24275658 1371 PERLEGEN AFD_EUR_PANEL European American (24) 24 0.5 123 "by doubleHit,freq,cluster" 1q21 extracellular matrix protein 1 2800 rs13294 ECM1 1893 1 147298060 NM_022664 NP_073155 A/G G290S plus 24275658 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.2 123 "by doubleHit,freq,cluster" 1q21 extracellular matrix protein 1 2801 rs13294 ECM1 1893 1 147298060 NM_022664 NP_073155 A/G G290S plus 24275658 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.25 123 "by doubleHit,freq,cluster" 1q21 extracellular matrix protein 1 2802 rs13303 STAB1 23166 3 52533048 NM_015136 NP_055951 C/T M2506T plus 15628 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.47 123 "HapMap,freq" 3p21.31 stabilin 1 2803 rs13303 STAB1 23166 3 52533048 NM_015136 NP_055951 C/T M2506T plus 6456184 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.49 123 "HapMap,freq" 3p21.31 stabilin 1 2804 rs13321 TNC 3371 9 114872137 NM_002160 NP_002151 C/G E2008Q minus 15647 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.33 121 "HapMap,doubleHit,submitter,freq,cluster" 9q33 tenascin C (hexabrachion) 2805 rs13321 TNC 3371 9 114872137 NM_002160 NP_002151 C/G E2008Q minus 15647 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.29 121 "HapMap,doubleHit,submitter,freq,cluster" 9q33 tenascin C (hexabrachion) 2806 rs13321 TNC 3371 9 114872137 NM_002160 NP_002151 C/G E2008Q minus 3210629 738 YUSUKE JBIC-ALLELE Japanese (752) 1502 0.45 121 "HapMap,doubleHit,submitter,freq,cluster" 9q33 tenascin C (hexabrachion) 2807 rs13321 TNC 3371 9 114872137 NM_002160 NP_002151 C/G E2008Q minus 17996538 1303 SEQUENOM CEPH CEPH (92) 92 0.33 121 "HapMap,doubleHit,submitter,freq,cluster" 9q33 tenascin C (hexabrachion) 2808 rs13412 SC65 10609 17 37220968 NM_006455 NP_006446 A/G Q186R minus 15740 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.36 121 "HapMap,doubleHit,submitter,freq,cluster" 17q21.31 synaptonemal complex protein SC65 2809 rs13412 SC65 10609 17 37220968 NM_006455 NP_006446 A/G Q186R minus 15740 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.33 121 "HapMap,doubleHit,submitter,freq,cluster" 17q21.31 synaptonemal complex protein SC65 2810 rs13412 SC65 10609 17 37220968 NM_006455 NP_006446 A/G Q186R minus 3197818 738 YUSUKE JBIC-ALLELE Japanese (752) 1310 0.49 121 "HapMap,doubleHit,submitter,freq,cluster" 17q21.31 synaptonemal complex protein SC65 2811 rs13412 SC65 10609 17 37220968 NM_006455 NP_006446 A/G Q186R minus 14281150 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.33 121 "HapMap,doubleHit,submitter,freq,cluster" 17q21.31 synaptonemal complex protein SC65 2812 rs13412 SC65 10609 17 37220968 NM_006455 NP_006446 A/G Q186R minus 14281150 1303 SEQUENOM CEPH CEPH (92) 92 0.36 121 "HapMap,doubleHit,submitter,freq,cluster" 17q21.31 synaptonemal complex protein SC65 2813 rs13428 ADPRTL1 143 13 23907441 NM_006437 NP_006428 C/G G1280R minus 15756 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.38 123 "by doubleHit,freq,cluster" 13q11 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 2814 rs13428 ADPRTL1 143 13 23907441 NM_006437 NP_006428 C/G G1280R minus 4928180 738 YUSUKE JBIC-ALLELE Japanese (752) 1486 0.29 123 "by doubleHit,freq,cluster" 13q11 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 2815 rs13428 ADPRTL1 143 13 23907441 NM_006437 NP_006428 C/G G1280R minus 5586208 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.44 123 "by doubleHit,freq,cluster" 13q11 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 2816 rs13428 ADPRTL1 143 13 23907441 NM_006437 NP_006428 C/G G1280R minus 5586208 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.47 123 "by doubleHit,freq,cluster" 13q11 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 2817 rs13428 ADPRTL1 143 13 23907441 NM_006437 NP_006428 C/G G1280R minus 5586208 776 SNP500CANCER AFR1 African / African-American (24) 48 0.48 123 "by doubleHit,freq,cluster" 13q11 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 2818 rs13428 ADPRTL1 143 13 23907441 NM_006437 NP_006428 C/G G1280R minus 5586208 777 SNP500CANCER HISP1 Hispanic (23) 46 0.35 123 "by doubleHit,freq,cluster" 13q11 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 2819 rs13428 ADPRTL1 143 13 23907441 NM_006437 NP_006428 C/G G1280R minus 5586208 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.46 123 "by doubleHit,freq,cluster" 13q11 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 2820 rs13428 ADPRTL1 143 13 23907441 NM_006437 NP_006428 C/G G1280R minus 5586208 1303 SEQUENOM CEPH CEPH (92) 92 0.38 123 "by doubleHit,freq,cluster" 13q11 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 2821 rs13538 NAT8 9027 2 73779983 NM_003960 NP_003951 C/T F143S minus 15872 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.41 123 "by doubleHit,freq,cluster" 2p13.1-p12 N-acetyltransferase 8 (camello like) 2822 rs13538 NAT8 9027 2 73779983 NM_003960 NP_003951 C/T F143S minus 16833592 1303 SEQUENOM CEPH CEPH (92) 93 0.41 123 "by doubleHit,freq,cluster" 2p13.1-p12 N-acetyltransferase 8 (camello like) 2823 rs13538 NAT8 9027 2 73779983 NM_003960 NP_003951 C/T F143S minus 23703251 1371 PERLEGEN AFD_EUR_PANEL European American (24) 42 0.29 123 "by doubleHit,freq,cluster" 2p13.1-p12 N-acetyltransferase 8 (camello like) 2824 rs13538 NAT8 9027 2 73779983 NM_003960 NP_003951 C/T F143S minus 23703251 1372 PERLEGEN AFD_AFR_PANEL African American (24) 34 0.47 123 "by doubleHit,freq,cluster" 2p13.1-p12 N-acetyltransferase 8 (camello like) 2825 rs13538 NAT8 9027 2 73779983 NM_003960 NP_003951 C/T F143S minus 23703251 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 1 123 "by doubleHit,freq,cluster" 2p13.1-p12 N-acetyltransferase 8 (camello like) 2826 rs13571 MRPL37 51253 1 54393941 NM_016491 NP_057575 C/G C366S minus 15909 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.25 123 "by doubleHit,submitter,freq,cluster" 1p32.1 mitochondrial ribosomal protein L37 2827 rs13571 MRPL37 51253 1 54393941 NM_016491 NP_057575 C/G C366S minus 815745 771 TSC-CSHL SC_12_A CORIELL Asian (12) 12 0.5 123 "by doubleHit,submitter,freq,cluster" 1p32.1 mitochondrial ribosomal protein L37 2828 rs13571 MRPL37 51253 1 54393941 NM_016491 NP_057575 C/G C366S minus 815745 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.25 123 "by doubleHit,submitter,freq,cluster" 1p32.1 mitochondrial ribosomal protein L37 2829 rs13571 MRPL37 51253 1 54393941 NM_016491 NP_057575 C/G C366S minus 815745 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.07 123 "by doubleHit,submitter,freq,cluster" 1p32.1 mitochondrial ribosomal protein L37 2830 rs13571 MRPL37 51253 1 54393941 NM_016491 NP_057575 C/G C366S minus 815745 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.12 123 "by doubleHit,submitter,freq,cluster" 1p32.1 mitochondrial ribosomal protein L37 2831 rs13571 MRPL37 51253 1 54393941 NM_016491 NP_057575 C/G C366S minus 1385235 766 TSC-CSHL WICGR1_CAUCASIAN WICGR Caucasian (93) 60 0.05 123 "by doubleHit,submitter,freq,cluster" 1p32.1 mitochondrial ribosomal protein L37 2832 rs13571 MRPL37 51253 1 54393941 NM_016491 NP_057575 C/G C366S minus 1385235 782 TSC-CSHL WICGR6_CAUCASIAN_POOLED WICGR Caucasian (48) 96 0.23 123 "by doubleHit,submitter,freq,cluster" 1p32.1 mitochondrial ribosomal protein L37 2833 rs13571 MRPL37 51253 1 54393941 NM_016491 NP_057575 C/G C366S minus 3190995 738 YUSUKE JBIC-ALLELE Japanese (752) 1484 0.43 123 "by doubleHit,submitter,freq,cluster" 1p32.1 mitochondrial ribosomal protein L37 2834 rs13571 MRPL37 51253 1 54393941 NM_016491 NP_057575 C/G C366S minus 5467515 1303 SEQUENOM CEPH CEPH (92) 92 0.25 123 "by doubleHit,submitter,freq,cluster" 1p32.1 mitochondrial ribosomal protein L37 2835 rs13571 MRPL37 51253 1 54393941 NM_016491 NP_057575 C/G C366S minus 23157298 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.3 123 "by doubleHit,submitter,freq,cluster" 1p32.1 mitochondrial ribosomal protein L37 2836 rs13571 MRPL37 51253 1 54393941 NM_016491 NP_057575 C/G C366S minus 23157298 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.4 123 "by doubleHit,submitter,freq,cluster" 1p32.1 mitochondrial ribosomal protein L37 2837 rs13571 MRPL37 51253 1 54393941 NM_016491 NP_057575 C/G C366S minus 23157298 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by doubleHit,submitter,freq,cluster" 1p32.1 mitochondrial ribosomal protein L37 2838 rs13622 CDC2L5 8621 7 39764499 NM_003718 NP_003709 C/T S340F plus 15964 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.31 52 by freq 7p13 cell division cycle 2-like 5 (cholinesterase-related cell division controller) 2839 rs13622 CDC2L5 8621 7 39764499 NM_003718 NP_003709 C/T S340F plus 15964 1303 SEQUENOM CEPH CEPH (92) 92 0.31 52 by freq 7p13 cell division cycle 2-like 5 (cholinesterase-related cell division controller) 2840 rs13622 CDC2L5 8621 7 39764499 NM_031267 NP_112557 C/T S340F plus 15964 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.31 52 by freq 7p13 cell division cycle 2-like 5 (cholinesterase-related cell division controller) 2841 rs13622 CDC2L5 8621 7 39764499 NM_031267 NP_112557 C/T S340F plus 15964 1303 SEQUENOM CEPH CEPH (92) 92 0.31 52 by freq 7p13 cell division cycle 2-like 5 (cholinesterase-related cell division controller) 2842 rs13628 RTBDN 83546 19 12797617 NM_031429 NP_113617 C/G G230A plus 10941168 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.04 123 "HapMap,doubleHit,freq,cluster" 19p12 retbindin 2843 rs13628 RTBDN 83546 19 12797617 NM_031429 NP_113617 C/G G230A plus 10941168 1303 SEQUENOM CEPH CEPH (92) 92 0.04 123 "HapMap,doubleHit,freq,cluster" 19p12 retbindin 2844 rs13706 CDC6 990 17 35710677 NM_001254 NP_001245 A/G V441I plus 3177778 619 WICVAR MITOGPOP6 CORIELL Mixed 42 0.29 123 "HapMap,freq,cluster" 17q21.3 CDC6 cell division cycle 6 homolog (S. cerevisiae) 2845 rs13706 CDC6 990 17 35710677 NM_001254 NP_001245 A/G V441I plus 4474783 738 YUSUKE JBIC-ALLELE Japanese (752) 1486 0.44 123 "HapMap,freq,cluster" 17q21.3 CDC6 cell division cycle 6 homolog (S. cerevisiae) 2846 rs13706 CDC6 990 17 35710677 NM_001254 NP_001245 A/G V441I plus 5587265 693 EGP_SNPS PDR90 NIHPDR 176 0.2 123 "HapMap,freq,cluster" 17q21.3 CDC6 cell division cycle 6 homolog (S. cerevisiae) 2847 rs13706 CDC6 990 17 35710677 NM_001254 NP_001245 A/G V441I plus 5587265 885 TSC-CSHL HapMap-CEPH-30-trios 116 0.15 123 "HapMap,freq,cluster" 17q21.3 CDC6 cell division cycle 6 homolog (S. cerevisiae) 2848 rs13706 CDC6 990 17 35710677 NM_001254 NP_001245 A/G V441I plus 5587265 1303 SEQUENOM CEPH CEPH (92) 92 0.04 123 "HapMap,freq,cluster" 17q21.3 CDC6 cell division cycle 6 homolog (S. cerevisiae) 2849 rs13706 CDC6 990 17 35710677 NM_001254 NP_001245 A/G V441I plus 23618880 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.1 123 "HapMap,freq,cluster" 17q21.3 CDC6 cell division cycle 6 homolog (S. cerevisiae) 2850 rs13706 CDC6 990 17 35710677 NM_001254 NP_001245 A/G V441I plus 23618880 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "HapMap,freq,cluster" 17q21.3 CDC6 cell division cycle 6 homolog (S. cerevisiae) 2851 rs13706 CDC6 990 17 35710677 NM_001254 NP_001245 A/G V441I plus 23618880 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.46 123 "HapMap,freq,cluster" 17q21.3 CDC6 cell division cycle 6 homolog (S. cerevisiae) 2852 rs13787 PPA2 27068 4 106675033 NM_006903 NP_008834 C/G K222N plus 14247279 1303 SEQUENOM CEPH CEPH (92) 92 0.46 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2853 rs13787 PPA2 27068 4 106675033 NM_006903 NP_008834 C/G K222N plus 16335497 901 AFFY AfAm 12 1 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2854 rs13787 PPA2 27068 4 106675033 NM_006903 NP_008834 C/G K222N plus 16335497 902 AFFY Caucasian 22 0.36 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2855 rs13787 PPA2 27068 4 106675033 NM_006903 NP_008834 C/G K222N plus 16335497 903 AFFY Asian 12 0.42 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2856 rs13787 PPA2 27068 4 106675033 NM_006903 NP_008834 C/G K222N plus 16335497 904 AFFY CEPH 12 0.17 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2857 rs13787 PPA2 27068 4 106675033 NM_006903 NP_008834 C/G K222N plus 16335497 905 AFFY PDpanel 44 0.36 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2858 rs13787 PPA2 27068 4 106675033 NM_006903 NP_008834 C/G K222N plus 24326919 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2859 rs13787 PPA2 27068 4 106675033 NM_006903 NP_008834 C/G K222N plus 24326919 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.16 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2860 rs13787 PPA2 27068 4 106675033 NM_006903 NP_008834 C/G K222N plus 24326919 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.38 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2861 rs13787 PPA2 27068 4 106675033 NM_176866 NP_789842 C/G K149N plus 14247279 1303 SEQUENOM CEPH CEPH (92) 92 0.46 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2862 rs13787 PPA2 27068 4 106675033 NM_176866 NP_789842 C/G K149N plus 16335497 901 AFFY AfAm 12 1 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2863 rs13787 PPA2 27068 4 106675033 NM_176866 NP_789842 C/G K149N plus 16335497 902 AFFY Caucasian 22 0.36 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2864 rs13787 PPA2 27068 4 106675033 NM_176866 NP_789842 C/G K149N plus 16335497 903 AFFY Asian 12 0.42 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2865 rs13787 PPA2 27068 4 106675033 NM_176866 NP_789842 C/G K149N plus 16335497 904 AFFY CEPH 12 0.17 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2866 rs13787 PPA2 27068 4 106675033 NM_176866 NP_789842 C/G K149N plus 16335497 905 AFFY PDpanel 44 0.36 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2867 rs13787 PPA2 27068 4 106675033 NM_176866 NP_789842 C/G K149N plus 24326919 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2868 rs13787 PPA2 27068 4 106675033 NM_176866 NP_789842 C/G K149N plus 24326919 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.16 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2869 rs13787 PPA2 27068 4 106675033 NM_176866 NP_789842 C/G K149N plus 24326919 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.38 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2870 rs13787 PPA2 27068 4 106675033 NM_176867 NP_789843 C/G K85N plus 14247279 1303 SEQUENOM CEPH CEPH (92) 92 0.46 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2871 rs13787 PPA2 27068 4 106675033 NM_176867 NP_789843 C/G K85N plus 16335497 901 AFFY AfAm 12 1 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2872 rs13787 PPA2 27068 4 106675033 NM_176867 NP_789843 C/G K85N plus 16335497 902 AFFY Caucasian 22 0.36 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2873 rs13787 PPA2 27068 4 106675033 NM_176867 NP_789843 C/G K85N plus 16335497 903 AFFY Asian 12 0.42 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2874 rs13787 PPA2 27068 4 106675033 NM_176867 NP_789843 C/G K85N plus 16335497 904 AFFY CEPH 12 0.17 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2875 rs13787 PPA2 27068 4 106675033 NM_176867 NP_789843 C/G K85N plus 16335497 905 AFFY PDpanel 44 0.36 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2876 rs13787 PPA2 27068 4 106675033 NM_176867 NP_789843 C/G K85N plus 24326919 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2877 rs13787 PPA2 27068 4 106675033 NM_176867 NP_789843 C/G K85N plus 24326919 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.16 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2878 rs13787 PPA2 27068 4 106675033 NM_176867 NP_789843 C/G K85N plus 24326919 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.38 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2879 rs13787 PPA2 27068 4 106675033 NM_176869 NP_789845 C/G K282N plus 14247279 1303 SEQUENOM CEPH CEPH (92) 92 0.46 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2880 rs13787 PPA2 27068 4 106675033 NM_176869 NP_789845 C/G K282N plus 16335497 901 AFFY AfAm 12 1 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2881 rs13787 PPA2 27068 4 106675033 NM_176869 NP_789845 C/G K282N plus 16335497 902 AFFY Caucasian 22 0.36 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2882 rs13787 PPA2 27068 4 106675033 NM_176869 NP_789845 C/G K282N plus 16335497 903 AFFY Asian 12 0.42 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2883 rs13787 PPA2 27068 4 106675033 NM_176869 NP_789845 C/G K282N plus 16335497 904 AFFY CEPH 12 0.17 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2884 rs13787 PPA2 27068 4 106675033 NM_176869 NP_789845 C/G K282N plus 16335497 905 AFFY PDpanel 44 0.36 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2885 rs13787 PPA2 27068 4 106675033 NM_176869 NP_789845 C/G K282N plus 24326919 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2886 rs13787 PPA2 27068 4 106675033 NM_176869 NP_789845 C/G K282N plus 24326919 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.16 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2887 rs13787 PPA2 27068 4 106675033 NM_176869 NP_789845 C/G K282N plus 24326919 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.38 123 "by doubleHit,submitter,freq,cluster" 4q25 inorganic pyrophosphatase 2 2888 rs13807 FAU 2197 11 64645610 NM_001997 NP_001988 C/T T53I minus 870143 555 UUGC NIH90 NIHPDR 180 0.01 120 "by cluster,freq" 11q13 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30 2889 rs13807 FAU 2197 11 64645610 NM_001997 NP_001988 C/T T53I minus 12709616 693 EGP_SNPS PDR90 NIHPDR 180 0.01 120 "by cluster,freq" 11q13 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30 2890 rs13807 FAU 2197 11 64645610 NM_001997 NP_001988 C/T T53I minus 12709616 1303 SEQUENOM CEPH CEPH (92) 92 1 120 "by cluster,freq" 11q13 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30 2891 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 16169 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.28 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2892 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 22576 638 TSC-CSHL TSC_42_AA TSC African American (42) 83 0.3 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2893 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 22576 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 42 0.5 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2894 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 22576 640 TSC-CSHL TSC_42_A TSC Asian (42) 83 0.4 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2895 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 22576 767 TSC-CSHL WICGR2_CAUCASIAN WICGR Caucasian (93) 80 0.23 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2896 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 22576 768 TSC-CSHL WICGR3_AFRICAN_AMERICAN WICGR African-American (50) 100 0.28 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2897 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 22576 769 TSC-CSHL WICGR4_ASIAN WICGR Asian (42) 84 0.42 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2898 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 22576 770 TSC-CSHL WICGR5_NIGERIAN WICGR Nigerian (96) 130 0.17 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2899 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 22576 901 AFFY AfAm 12 0.17 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2900 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 22576 902 AFFY Caucasian 24 0.38 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2901 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 22576 903 AFFY Asian 6 0.5 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2902 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 22576 904 AFFY CEPH 12 0.42 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2903 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 22576 905 AFFY PDpanel 40 0.38 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2904 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 2986985 738 YUSUKE JBIC-ALLELE Japanese (752) 928 0.43 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2905 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 8011473 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.29 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2906 rs13815 MT 27349 22 41853812 NM_173467 NP_775738 C/G A246G minus 8011473 1303 SEQUENOM CEPH CEPH (92) 92 0.28 123 "HapMap,doubleHit,freq,cluster" 22q13.31 malonyl-CoA:acyl carrier protein transacylase (malonyltransferase) 2907 rs13817 MUS81 80198 11 65384910 NM_025128 NP_079404 A/G R37H plus 16171 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.2 121 "by doubleHit,freq,cluster" 11q13 MUS81 endonuclease homolog (yeast) 2908 rs13817 MUS81 80198 11 65384910 NM_025128 NP_079404 A/G R37H plus 1727380 1303 SEQUENOM CEPH CEPH (92) 92 0.2 121 "by doubleHit,freq,cluster" 11q13 MUS81 endonuclease homolog (yeast) 2909 rs13864 DSCR9 257203 21 37515490 NM_148675 NP_683516 A/C R76L minus 16221 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.26 123 "by doubleHit,submitter,freq,cluster" 21q22.13 Down syndrome critical region gene 9 2910 rs13864 DSCR9 257203 21 37515490 NM_148675 NP_683516 A/C R76L minus 12502434 1303 SEQUENOM CEPH CEPH (92) 92 0.26 123 "by doubleHit,submitter,freq,cluster" 21q22.13 Down syndrome critical region gene 9 2911 rs13864 DSCR9 257203 21 37515490 NM_148675 NP_683516 A/C R76L minus 23802558 1371 PERLEGEN AFD_EUR_PANEL European American (24) 42 0.31 123 "by doubleHit,submitter,freq,cluster" 21q22.13 Down syndrome critical region gene 9 2912 rs13864 DSCR9 257203 21 37515490 NM_148675 NP_683516 A/C R76L minus 23802558 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.42 123 "by doubleHit,submitter,freq,cluster" 21q22.13 Down syndrome critical region gene 9 2913 rs13864 DSCR9 257203 21 37515490 NM_148675 NP_683516 A/C R76L minus 23802558 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 42 0.29 123 "by doubleHit,submitter,freq,cluster" 21q22.13 Down syndrome critical region gene 9 2914 rs13874 SLC25A26 115286 3 66502646 NM_173471 NP_775742 A/G T120M minus 3236130 738 YUSUKE JBIC-ALLELE Japanese (752) 1450 0.27 123 "HapMap,doubleHit,submitter,freq,cluster" 3p14.3 "solute carrier family 25, member 26" 2915 rs13874 SLC25A26 115286 3 66502646 NM_173471 NP_775742 A/G T120M minus 5208762 885 TSC-CSHL HapMap-CEPH-30-trios 106 0.48 123 "HapMap,doubleHit,submitter,freq,cluster" 3p14.3 "solute carrier family 25, member 26" 2916 rs13874 SLC25A26 115286 3 66502646 NM_173471 NP_775742 A/G T120M minus 16335299 901 AFFY AfAm 12 0.25 123 "HapMap,doubleHit,submitter,freq,cluster" 3p14.3 "solute carrier family 25, member 26" 2917 rs13874 SLC25A26 115286 3 66502646 NM_173471 NP_775742 A/G T120M minus 16335299 902 AFFY Caucasian 11 0.5 123 "HapMap,doubleHit,submitter,freq,cluster" 3p14.3 "solute carrier family 25, member 26" 2918 rs13874 SLC25A26 115286 3 66502646 NM_173471 NP_775742 A/G T120M minus 16335299 903 AFFY Asian 10 0.2 123 "HapMap,doubleHit,submitter,freq,cluster" 3p14.3 "solute carrier family 25, member 26" 2919 rs13874 SLC25A26 115286 3 66502646 NM_173471 NP_775742 A/G T120M minus 16335299 904 AFFY CEPH 12 0.42 123 "HapMap,doubleHit,submitter,freq,cluster" 3p14.3 "solute carrier family 25, member 26" 2920 rs13874 SLC25A26 115286 3 66502646 NM_173471 NP_775742 A/G T120M minus 16335299 905 AFFY PDpanel 48 0.31 123 "HapMap,doubleHit,submitter,freq,cluster" 3p14.3 "solute carrier family 25, member 26" 2921 rs13874 SLC25A26 115286 3 66502646 NM_173471 NP_775742 A/G T120M minus 24304887 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.44 123 "HapMap,doubleHit,submitter,freq,cluster" 3p14.3 "solute carrier family 25, member 26" 2922 rs13874 SLC25A26 115286 3 66502646 NM_173471 NP_775742 A/G T120M minus 24304887 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.26 123 "HapMap,doubleHit,submitter,freq,cluster" 3p14.3 "solute carrier family 25, member 26" 2923 rs13874 SLC25A26 115286 3 66502646 NM_173471 NP_775742 A/G T120M minus 24304887 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.29 123 "HapMap,doubleHit,submitter,freq,cluster" 3p14.3 "solute carrier family 25, member 26" 2924 rs13894 SAT2 112483 17 7470627 NM_133491 NP_597998 C/T R126C minus 3228301 738 YUSUKE JBIC-ALLELE Japanese (752) 1476 0.06 120 "HapMap,doubleHit,freq,cluster" 17p13.2 spermidine/spermine N1-acetyltransferase 2 2925 rs13894 SAT2 112483 17 7470627 NM_133491 NP_597998 C/T R126C minus 14295724 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.1 120 "HapMap,doubleHit,freq,cluster" 17p13.2 spermidine/spermine N1-acetyltransferase 2 2926 rs13894 SAT2 112483 17 7470627 NM_133491 NP_597998 C/T R126C minus 14295724 1303 SEQUENOM CEPH CEPH (92) 92 0.04 120 "HapMap,doubleHit,freq,cluster" 17p13.2 spermidine/spermine N1-acetyltransferase 2 2927 rs13898 AEBP1 165 7 43927065 NM_001129 NP_001120 A/G V1148I plus 4479021 693 EGP_SNPS PDR90 NIHPDR 170 0.01 121 "HapMap,freq,cluster" 7p13 AE binding protein 1 2928 rs13898 AEBP1 165 7 43927065 NM_001129 NP_001120 A/G V1148I plus 4479021 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.08 121 "HapMap,freq,cluster" 7p13 AE binding protein 1 2929 rs13898 AEBP1 165 7 43927065 NM_001129 NP_001120 A/G V1148I plus 4479021 1303 SEQUENOM CEPH CEPH (92) 92 0.02 121 "HapMap,freq,cluster" 7p13 AE binding protein 1 2930 rs13926 TRAP1 10131 16 3664466 NM_016292 NP_057376 C/G R307G minus 89200 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.49 123 "HapMap,doubleHit,freq,cluster" 16p13.3 heat shock protein 75 2931 rs13926 TRAP1 10131 16 3664466 NM_016292 NP_057376 C/G R307G minus 89200 1303 SEQUENOM CEPH CEPH (92) 92 0.46 123 "HapMap,doubleHit,freq,cluster" 16p13.3 heat shock protein 75 2932 rs13926 TRAP1 10131 16 3664466 NM_016292 NP_057376 C/G R307G minus 2989612 1072 RIKENSNPRC JBIC-ALLELE Japanese (752) 1390 0.43 123 "HapMap,doubleHit,freq,cluster" 16p13.3 heat shock protein 75 2933 rs13926 TRAP1 10131 16 3664466 NM_016292 NP_057376 C/G R307G minus 24217057 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.46 123 "HapMap,doubleHit,freq,cluster" 16p13.3 heat shock protein 75 2934 rs13926 TRAP1 10131 16 3664466 NM_016292 NP_057376 C/G R307G minus 24217057 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.17 123 "HapMap,doubleHit,freq,cluster" 16p13.3 heat shock protein 75 2935 rs13926 TRAP1 10131 16 3664466 NM_016292 NP_057376 C/G R307G minus 24217057 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.48 123 "HapMap,doubleHit,freq,cluster" 16p13.3 heat shock protein 75 2936 rs13928 AEBP1 165 7 43927020 NM_001129 NP_001120 A/G K1133E plus 3177826 619 WICVAR MITOGPOP6 CORIELL Mixed 44 0.45 121 "by doubleHit,freq,cluster" 7p13 AE binding protein 1 2937 rs13928 AEBP1 165 7 43927020 NM_001129 NP_001120 A/G K1133E plus 3177826 1303 SEQUENOM CEPH CEPH (92) 92 0.44 121 "by doubleHit,freq,cluster" 7p13 AE binding protein 1 2938 rs13962 FY 2532 1 155988600 NM_002036 NP_002027 A/G A100T plus 2580085 1303 SEQUENOM CEPH CEPH (92) 92 0.35 123 "by doubleHit,freq,cluster" 1q21-q22 Duffy blood group 2939 rs13963 TNA 7123 3 45052127 NM_003278 NP_003269 A/G G106S plus 16325 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.26 123 "by doubleHit,freq,cluster" 3p22-p21.3 tetranectin (plasminogen binding protein) 2940 rs13963 TNA 7123 3 45052127 NM_003278 NP_003269 A/G G106S plus 6448948 1303 SEQUENOM CEPH CEPH (92) 92 0.26 123 "by doubleHit,freq,cluster" 3p22-p21.3 tetranectin (plasminogen binding protein) 2941 rs13991 TXNL2 10539 10 131824737 NM_006541 NP_006532 C/G Q21H minus 3209926 738 YUSUKE JBIC-ALLELE Japanese (752) 1488 0.08 120 "by cluster,freq" 6p25.3 thioredoxin-like 2 2942 rs13991 TXNL2 10539 10 131824737 NM_006541 NP_006532 C/G Q21H minus 3209926 1303 SEQUENOM CEPH CEPH (92) 92 1 120 "by cluster,freq" 6p25.3 thioredoxin-like 2 2943 rs14008 TACSTD2 4070 1 58754202 NM_002353 NP_002344 A/C D216E minus 650638 1303 SEQUENOM CEPH CEPH (92) 92 0.01 123 "by doubleHit,freq,cluster" 1p32-p31 tumor-associated calcium signal transducer 2 2944 rs14008 TACSTD2 4070 1 58754202 NM_002353 NP_002344 A/C D216E minus 3219742 738 YUSUKE JBIC-ALLELE Japanese (752) 1470 0.11 123 "by doubleHit,freq,cluster" 1p32-p31 tumor-associated calcium signal transducer 2 2945 rs14008 TACSTD2 4070 1 58754202 NM_002353 NP_002344 A/C D216E minus 24796670 1303 SEQUENOM CEPH CEPH (92) 184 0.05 123 "by doubleHit,freq,cluster" 1p32-p31 tumor-associated calcium signal transducer 2 2946 rs14024 KRT1 3848 12 51355281 NM_006121 NP_006112 A/G K633R minus 16388 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.42 123 "HapMap,doubleHit,freq,cluster" 12q12-q13 keratin 1 (epidermolytic hyperkeratosis) 2947 rs14024 KRT1 3848 12 51355281 NM_006121 NP_006112 A/G K633R minus 3869018 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.34 123 "HapMap,doubleHit,freq,cluster" 12q12-q13 keratin 1 (epidermolytic hyperkeratosis) 2948 rs14024 KRT1 3848 12 51355281 NM_006121 NP_006112 A/G K633R minus 5011704 738 YUSUKE JBIC-ALLELE Japanese (752) 1498 0.36 123 "HapMap,doubleHit,freq,cluster" 12q12-q13 keratin 1 (epidermolytic hyperkeratosis) 2949 rs14024 KRT1 3848 12 51355281 NM_006121 NP_006112 A/G K633R minus 16565519 1303 SEQUENOM CEPH CEPH (92) 92 0.42 123 "HapMap,doubleHit,freq,cluster" 12q12-q13 keratin 1 (epidermolytic hyperkeratosis) 2950 rs14024 KRT1 3848 12 51355281 NM_006121 NP_006112 A/G K633R minus 23957083 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.4 123 "HapMap,doubleHit,freq,cluster" 12q12-q13 keratin 1 (epidermolytic hyperkeratosis) 2951 rs14024 KRT1 3848 12 51355281 NM_006121 NP_006112 A/G K633R minus 23957083 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "HapMap,doubleHit,freq,cluster" 12q12-q13 keratin 1 (epidermolytic hyperkeratosis) 2952 rs14024 KRT1 3848 12 51355281 NM_006121 NP_006112 A/G K633R minus 23957083 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.46 123 "HapMap,doubleHit,freq,cluster" 12q12-q13 keratin 1 (epidermolytic hyperkeratosis) 2953 rs14115 HSPC051 29796 22 28488080 NM_013387 NP_037519 A/G I47V plus 3226471 738 YUSUKE JBIC-ALLELE Japanese (752) 1496 0.05 123 "HapMap,submitter,freq,cluster" 22cen-q12.3 ubiquinol-cytochrome c reductase complex (7.2 kD) 2954 rs14115 HSPC051 29796 22 28488080 NM_013387 NP_037519 A/G I47V plus 3226471 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.03 123 "HapMap,submitter,freq,cluster" 22cen-q12.3 ubiquinol-cytochrome c reductase complex (7.2 kD) 2955 rs14115 HSPC051 29796 22 28488080 NM_013387 NP_037519 A/G I47V plus 23592348 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "HapMap,submitter,freq,cluster" 22cen-q12.3 ubiquinol-cytochrome c reductase complex (7.2 kD) 2956 rs14115 HSPC051 29796 22 28488080 NM_013387 NP_037519 A/G I47V plus 23592348 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.35 123 "HapMap,submitter,freq,cluster" 22cen-q12.3 ubiquinol-cytochrome c reductase complex (7.2 kD) 2957 rs14115 HSPC051 29796 22 28488080 NM_013387 NP_037519 A/G I47V plus 23592348 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.04 123 "HapMap,submitter,freq,cluster" 22cen-q12.3 ubiquinol-cytochrome c reductase complex (7.2 kD) 2958 rs15233 RAB9P40 10244 9 125075693 NM_005833 NP_005824 G/T M333I plus 17626 1303 SEQUENOM CEPH CEPH (92) 92 0.02 120 by freq 9q34.11 Rab9 effector p40 2959 rs15251 TCOF1 6949 5 149756425 NM_000356 NP_000347 C/T A1313V plus 1484139 771 TSC-CSHL SC_12_A CORIELL Asian (12) 18 0.11 123 "HapMap,doubleHit,submitter,freq" 5q32-q33.1 Treacher Collins-Franceschetti syndrome 1 2960 rs15251 TCOF1 6949 5 149756425 NM_000356 NP_000347 C/T A1313V plus 1484139 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 14 0.07 123 "HapMap,doubleHit,submitter,freq" 5q32-q33.1 Treacher Collins-Franceschetti syndrome 1 2961 rs15251 TCOF1 6949 5 149756425 NM_000356 NP_000347 C/T A1313V plus 1484139 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.14 123 "HapMap,doubleHit,submitter,freq" 5q32-q33.1 Treacher Collins-Franceschetti syndrome 1 2962 rs15251 TCOF1 6949 5 149756425 NM_000356 NP_000347 C/T A1313V plus 1484139 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 88 0.13 123 "HapMap,doubleHit,submitter,freq" 5q32-q33.1 Treacher Collins-Franceschetti syndrome 1 2963 rs15251 TCOF1 6949 5 149756425 NM_000356 NP_000347 C/T A1313V plus 1484139 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.23 123 "HapMap,doubleHit,submitter,freq" 5q32-q33.1 Treacher Collins-Franceschetti syndrome 1 2964 rs15251 TCOF1 6949 5 149756425 NM_000356 NP_000347 C/T A1313V plus 1484139 1303 SEQUENOM CEPH CEPH (92) 92 0.29 123 "HapMap,doubleHit,submitter,freq" 5q32-q33.1 Treacher Collins-Franceschetti syndrome 1 2965 rs15251 TCOF1 6949 5 149756425 NM_000356 NP_000347 C/T A1313V plus 24685232 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.25 123 "HapMap,doubleHit,submitter,freq" 5q32-q33.1 Treacher Collins-Franceschetti syndrome 1 2966 rs15251 TCOF1 6949 5 149756425 NM_000356 NP_000347 C/T A1313V plus 24685232 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.09 123 "HapMap,doubleHit,submitter,freq" 5q32-q33.1 Treacher Collins-Franceschetti syndrome 1 2967 rs15251 TCOF1 6949 5 149756425 NM_000356 NP_000347 C/T A1313V plus 24685232 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.23 123 "HapMap,doubleHit,submitter,freq" 5q32-q33.1 Treacher Collins-Franceschetti syndrome 1 2968 rs15547 CAPZA3 93661 12 18783238 NM_033328 NP_201585 A/G R257X minus 16245660 1303 SEQUENOM CEPH CEPH (92) 92 0.02 120 by freq 12p12.3 "capping protein (actin filament) muscle Z-line, alpha 3" 2969 rs15648 COPG 22820 3 130473840 NM_016128 NP_057212 A/G M681T minus 18062 1303 SEQUENOM CEPH CEPH (92) 92 0.04 52 by freq 3q21.3 "coatomer protein complex, subunit gamma" 2970 rs15772 RPP38 10557 10 15185861 NM_006414 NP_006405 C/G A181G plus 18187 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.26 120 "by doubleHit,freq" 10p13 ribonuclease P/MRP 38kDa subunit 2971 rs15772 RPP38 10557 10 15185861 NM_006414 NP_006405 C/G A181G plus 18187 1303 SEQUENOM CEPH CEPH (92) 92 0.26 120 "by doubleHit,freq" 10p13 ribonuclease P/MRP 38kDa subunit 2972 rs15772 RPP38 10557 10 15185861 NM_183005 NP_892117 C/G A181G plus 18187 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.26 120 "by doubleHit,freq" 10p13 ribonuclease P/MRP 38kDa subunit 2973 rs15772 RPP38 10557 10 15185861 NM_183005 NP_892117 C/G A181G plus 18187 1303 SEQUENOM CEPH CEPH (92) 92 0.26 120 "by doubleHit,freq" 10p13 ribonuclease P/MRP 38kDa subunit 2974 rs15783 MUC15 143662 11 26543377 NM_145650 NP_663625 A/G T202I plus 18199 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.46 121 "HapMap,doubleHit,freq,cluster" 11p14.3 mucin 15 2975 rs15783 MUC15 143662 11 26543377 NM_145650 NP_663625 A/G T202I plus 2136020 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.29 121 "HapMap,doubleHit,freq,cluster" 11p14.3 mucin 15 2976 rs15783 MUC15 143662 11 26543377 NM_145650 NP_663625 A/G T202I plus 2136020 1303 SEQUENOM CEPH CEPH (92) 92 0.46 121 "HapMap,doubleHit,freq,cluster" 11p14.3 mucin 15 2977 rs15783 MUC15 143662 11 26543377 NM_145650 NP_663625 A/G T202I plus 3234920 738 YUSUKE JBIC-ALLELE Japanese (752) 1488 0.38 121 "HapMap,doubleHit,freq,cluster" 11p14.3 mucin 15 2978 rs15895 OAS2 4939 12 111911008 NM_016817 NP_058197 C/T *720W minus 18316 665 CGAP-GAI POOLED_CEPH CEPH Caucasians (94) 188 0.33 123 "by doubleHit,submitter,freq,cluster" 12q24.2 "2'-5'-oligoadenylate synthetase 2, 69/71kDa" 2979 rs15895 OAS2 4939 12 111911008 NM_016817 NP_058197 C/T *720W minus 2055335 1303 SEQUENOM CEPH CEPH (92) 92 0.33 123 "by doubleHit,submitter,freq,cluster" 12q24.2 "2'-5'-oligoadenylate synthetase 2, 69/71kDa" 2980 rs15895 OAS2 4939 12 111911008 NM_016817 NP_058197 C/T *720W minus 2428576 771 TSC-CSHL SC_12_A CORIELL Asian (12) 20 1 123 "by doubleHit,submitter,freq,cluster" 12q24.2 "2'-5'-oligoadenylate synthetase 2, 69/71kDa" 2981 rs15895 OAS2 4939 12 111911008 NM_016817 NP_058197 C/T *720W minus 2428576 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.17 123 "by doubleHit,submitter,freq,cluster" 12q24.2 "2'-5'-oligoadenylate synthetase 2, 69/71kDa" 2982 rs15895 OAS2 4939 12 111911008 NM_016817 NP_058197 C/T *720W minus 2428576 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.43 123 "by doubleHit,submitter,freq,cluster" 12q24.2 "2'-5'-oligoadenylate synthetase 2, 69/71kDa" 2983 rs15895 OAS2 4939 12 111911008 NM_016817 NP_058197 C/T *720W minus 2428576 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 184 0.41 123 "by doubleHit,submitter,freq,cluster" 12q24.2 "2'-5'-oligoadenylate synthetase 2, 69/71kDa" 2984 rs15895 OAS2 4939 12 111911008 NM_016817 NP_058197 C/T *720W minus 24416187 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.44 123 "by doubleHit,submitter,freq,cluster" 12q24.2 "2'-5'-oligoadenylate synthetase 2, 69/71kDa" 2985 rs15895 OAS2 4939 12 111911008 NM_016817 NP_058197 C/T *720W minus 24416187 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "by doubleHit,submitter,freq,cluster" 12q24.2 "2'-5'-oligoadenylate synthetase 2, 69/71kDa" 2986 rs15895 OAS2 4939 12 111911008 NM_016817 NP_058197 C/T *720W minus 24416187 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by doubleHit,submitter,freq,cluster" 12q24.2 "2'-5'-oligoadenylate synthetase 2, 69/71kDa" 2987 rs15911 CTBS 1486 1 84741098 NM_004388 NP_004379 C/T V274I plus 4391078 1303 SEQUENOM CEPH CEPH (92) 92 0.48 123 by freq 1p22 "chitobiase, di-N-acetyl-" 2988 rs15911 CTBS 1486 1 84741098 NM_004388 NP_004379 C/T V274I plus 24238464 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.38 123 by freq 1p22 "chitobiase, di-N-acetyl-" 2989 rs15911 CTBS 1486 1 84741098 NM_004388 NP_004379 C/T V274I plus 24238464 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 by freq 1p22 "chitobiase, di-N-acetyl-" 2990 rs15911 CTBS 1486 1 84741098 NM_004388 NP_004379 C/T V274I plus 24238464 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.04 123 by freq 1p22 "chitobiase, di-N-acetyl-" 2991 rs15922 TAF11 6882 6 34958804 NM_005643 NP_005634 C/G T68R minus 6312498 693 EGP_SNPS PDR90 NIHPDR 180 0.02 123 "by cluster,freq" 6p21.31 "TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa" 2992 rs15922 TAF11 6882 6 34958804 NM_005643 NP_005634 C/G T68R minus 6312498 1303 SEQUENOM CEPH CEPH (92) 92 0.03 123 "by cluster,freq" 6p21.31 "TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa" 2993 rs15922 TAF11 6882 6 34958804 NM_005643 NP_005634 C/G T68R minus 24383722 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.06 123 "by cluster,freq" 6p21.31 "TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa" 2994 rs15922 TAF11 6882 6 34958804 NM_005643 NP_005634 C/G T68R minus 24383722 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by cluster,freq" 6p21.31 "TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa" 2995 rs15922 TAF11 6882 6 34958804 NM_005643 NP_005634 C/G T68R minus 24383722 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 6p21.31 "TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa" 2996 rs16022 CACNA1A 773 19 13270696 NM_000068 NP_000059 C/G E918D minus 18443 1303 SEQUENOM CEPH CEPH (92) 92 0.1 108 "by cluster,freq" 19p13.2-p13.1 "calcium channel, voltage-dependent, P/Q type, alpha 1A subunit" 2997 rs16022 CACNA1A 773 19 13270696 NM_000068 NP_000059 C/G E918D minus 4938201 738 YUSUKE JBIC-ALLELE Japanese (752) 924 0.16 108 "by cluster,freq" 19p13.2-p13.1 "calcium channel, voltage-dependent, P/Q type, alpha 1A subunit" 2998 rs16027 CACNA1A 773 19 13258560 NM_000068 NP_000059 A/G G1105S minus 18448 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.13 54 "HapMap,freq" 19p13.2-p13.1 "calcium channel, voltage-dependent, P/Q type, alpha 1A subunit" 2999 rs16027 CACNA1A 773 19 13258560 NM_000068 NP_000059 A/G G1105S minus 18448 1303 SEQUENOM CEPH CEPH (92) 92 0.19 54 "HapMap,freq" 19p13.2-p13.1 "calcium channel, voltage-dependent, P/Q type, alpha 1A subunit" 3000 rs16522 ARL12 390790 17 34570514 XM_372668 XP_372668 C/T Q116R plus 24114937 1371 PERLEGEN AFD_EUR_PANEL European American (24) 38 0.13 123 "by doubleHit,freq,cluster" 17q21.2 ADP-ribosylation factor-like 12 3001 rs16522 ARL12 390790 17 34570514 XM_372668 XP_372668 C/T Q116R plus 24114937 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 1 123 "by doubleHit,freq,cluster" 17q21.2 ADP-ribosylation factor-like 12 3002 rs16522 ARL12 390790 17 34570514 XM_372668 XP_372668 C/T Q116R plus 24114937 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 42 0.19 123 "by doubleHit,freq,cluster" 17q21.2 ADP-ribosylation factor-like 12 3003 rs16941 BRCA1 672 17 38497961 NM_007294 NP_009225 A/G E1038G minus 3176017 619 WICVAR MITOGPOP6 CORIELL Mixed 54 0.02 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3004 rs16941 BRCA1 672 17 38497961 NM_007294 NP_009225 A/G E1038G minus 5586284 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3005 rs16941 BRCA1 672 17 38497961 NM_007294 NP_009225 A/G E1038G minus 5586284 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3006 rs16941 BRCA1 672 17 38497961 NM_007294 NP_009225 A/G E1038G minus 5586284 776 SNP500CANCER AFR1 African / African-American (24) 48 0.08 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3007 rs16941 BRCA1 672 17 38497961 NM_007294 NP_009225 A/G E1038G minus 5586284 777 SNP500CANCER HISP1 Hispanic (23) 46 0.33 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3008 rs16941 BRCA1 672 17 38497961 NM_007294 NP_009225 A/G E1038G minus 5586284 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.3 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3009 rs16941 BRCA1 672 17 38497961 NM_007294 NP_009225 A/G E1038G minus 8486259 693 EGP_SNPS PDR90 NIHPDR 174 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3010 rs16941 BRCA1 672 17 38497961 NM_007294 NP_009225 A/G E1038G minus 8486259 1303 SEQUENOM CEPH CEPH (92) 92 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3011 rs16941 BRCA1 672 17 38497961 NM_007295 NP_009226 A/G E1038G minus 3176017 619 WICVAR MITOGPOP6 CORIELL Mixed 54 0.02 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3012 rs16941 BRCA1 672 17 38497961 NM_007295 NP_009226 A/G E1038G minus 5586284 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3013 rs16941 BRCA1 672 17 38497961 NM_007295 NP_009226 A/G E1038G minus 5586284 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3014 rs16941 BRCA1 672 17 38497961 NM_007295 NP_009226 A/G E1038G minus 5586284 776 SNP500CANCER AFR1 African / African-American (24) 48 0.08 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3015 rs16941 BRCA1 672 17 38497961 NM_007295 NP_009226 A/G E1038G minus 5586284 777 SNP500CANCER HISP1 Hispanic (23) 46 0.33 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3016 rs16941 BRCA1 672 17 38497961 NM_007295 NP_009226 A/G E1038G minus 5586284 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.3 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3017 rs16941 BRCA1 672 17 38497961 NM_007295 NP_009226 A/G E1038G minus 8486259 693 EGP_SNPS PDR90 NIHPDR 174 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3018 rs16941 BRCA1 672 17 38497961 NM_007295 NP_009226 A/G E1038G minus 8486259 1303 SEQUENOM CEPH CEPH (92) 92 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3019 rs16941 BRCA1 672 17 38497961 NM_007296 NP_009227 A/G E1038G minus 3176017 619 WICVAR MITOGPOP6 CORIELL Mixed 54 0.02 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3020 rs16941 BRCA1 672 17 38497961 NM_007296 NP_009227 A/G E1038G minus 5586284 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3021 rs16941 BRCA1 672 17 38497961 NM_007296 NP_009227 A/G E1038G minus 5586284 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3022 rs16941 BRCA1 672 17 38497961 NM_007296 NP_009227 A/G E1038G minus 5586284 776 SNP500CANCER AFR1 African / African-American (24) 48 0.08 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3023 rs16941 BRCA1 672 17 38497961 NM_007296 NP_009227 A/G E1038G minus 5586284 777 SNP500CANCER HISP1 Hispanic (23) 46 0.33 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3024 rs16941 BRCA1 672 17 38497961 NM_007296 NP_009227 A/G E1038G minus 5586284 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.3 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3025 rs16941 BRCA1 672 17 38497961 NM_007296 NP_009227 A/G E1038G minus 8486259 693 EGP_SNPS PDR90 NIHPDR 174 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3026 rs16941 BRCA1 672 17 38497961 NM_007296 NP_009227 A/G E1038G minus 8486259 1303 SEQUENOM CEPH CEPH (92) 92 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3027 rs16941 BRCA1 672 17 38497961 NM_007297 NP_009228 A/G E742G minus 3176017 619 WICVAR MITOGPOP6 CORIELL Mixed 54 0.02 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3028 rs16941 BRCA1 672 17 38497961 NM_007297 NP_009228 A/G E742G minus 5586284 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3029 rs16941 BRCA1 672 17 38497961 NM_007297 NP_009228 A/G E742G minus 5586284 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3030 rs16941 BRCA1 672 17 38497961 NM_007297 NP_009228 A/G E742G minus 5586284 776 SNP500CANCER AFR1 African / African-American (24) 48 0.08 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3031 rs16941 BRCA1 672 17 38497961 NM_007297 NP_009228 A/G E742G minus 5586284 777 SNP500CANCER HISP1 Hispanic (23) 46 0.33 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3032 rs16941 BRCA1 672 17 38497961 NM_007297 NP_009228 A/G E742G minus 5586284 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.3 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3033 rs16941 BRCA1 672 17 38497961 NM_007297 NP_009228 A/G E742G minus 8486259 693 EGP_SNPS PDR90 NIHPDR 174 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3034 rs16941 BRCA1 672 17 38497961 NM_007297 NP_009228 A/G E742G minus 8486259 1303 SEQUENOM CEPH CEPH (92) 92 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3035 rs16941 BRCA1 672 17 38497961 NM_007299 NP_009230 A/G E1038G minus 3176017 619 WICVAR MITOGPOP6 CORIELL Mixed 54 0.02 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3036 rs16941 BRCA1 672 17 38497961 NM_007299 NP_009230 A/G E1038G minus 5586284 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3037 rs16941 BRCA1 672 17 38497961 NM_007299 NP_009230 A/G E1038G minus 5586284 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3038 rs16941 BRCA1 672 17 38497961 NM_007299 NP_009230 A/G E1038G minus 5586284 776 SNP500CANCER AFR1 African / African-American (24) 48 0.08 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3039 rs16941 BRCA1 672 17 38497961 NM_007299 NP_009230 A/G E1038G minus 5586284 777 SNP500CANCER HISP1 Hispanic (23) 46 0.33 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3040 rs16941 BRCA1 672 17 38497961 NM_007299 NP_009230 A/G E1038G minus 5586284 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.3 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3041 rs16941 BRCA1 672 17 38497961 NM_007299 NP_009230 A/G E1038G minus 8486259 693 EGP_SNPS PDR90 NIHPDR 174 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3042 rs16941 BRCA1 672 17 38497961 NM_007299 NP_009230 A/G E1038G minus 8486259 1303 SEQUENOM CEPH CEPH (92) 92 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3043 rs16941 BRCA1 672 17 38497961 NM_007300 NP_009231 A/G E1038G minus 3176017 619 WICVAR MITOGPOP6 CORIELL Mixed 54 0.02 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3044 rs16941 BRCA1 672 17 38497961 NM_007300 NP_009231 A/G E1038G minus 5586284 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3045 rs16941 BRCA1 672 17 38497961 NM_007300 NP_009231 A/G E1038G minus 5586284 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3046 rs16941 BRCA1 672 17 38497961 NM_007300 NP_009231 A/G E1038G minus 5586284 776 SNP500CANCER AFR1 African / African-American (24) 48 0.08 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3047 rs16941 BRCA1 672 17 38497961 NM_007300 NP_009231 A/G E1038G minus 5586284 777 SNP500CANCER HISP1 Hispanic (23) 46 0.33 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3048 rs16941 BRCA1 672 17 38497961 NM_007300 NP_009231 A/G E1038G minus 5586284 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.3 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3049 rs16941 BRCA1 672 17 38497961 NM_007300 NP_009231 A/G E1038G minus 8486259 693 EGP_SNPS PDR90 NIHPDR 174 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3050 rs16941 BRCA1 672 17 38497961 NM_007300 NP_009231 A/G E1038G minus 8486259 1303 SEQUENOM CEPH CEPH (92) 92 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3051 rs16941 BRCA1 672 17 38497961 NM_007301 NP_009232 A/G E1038G minus 3176017 619 WICVAR MITOGPOP6 CORIELL Mixed 54 0.02 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3052 rs16941 BRCA1 672 17 38497961 NM_007301 NP_009232 A/G E1038G minus 5586284 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3053 rs16941 BRCA1 672 17 38497961 NM_007301 NP_009232 A/G E1038G minus 5586284 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3054 rs16941 BRCA1 672 17 38497961 NM_007301 NP_009232 A/G E1038G minus 5586284 776 SNP500CANCER AFR1 African / African-American (24) 48 0.08 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3055 rs16941 BRCA1 672 17 38497961 NM_007301 NP_009232 A/G E1038G minus 5586284 777 SNP500CANCER HISP1 Hispanic (23) 46 0.33 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3056 rs16941 BRCA1 672 17 38497961 NM_007301 NP_009232 A/G E1038G minus 5586284 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.3 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3057 rs16941 BRCA1 672 17 38497961 NM_007301 NP_009232 A/G E1038G minus 8486259 693 EGP_SNPS PDR90 NIHPDR 174 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3058 rs16941 BRCA1 672 17 38497961 NM_007301 NP_009232 A/G E1038G minus 8486259 1303 SEQUENOM CEPH CEPH (92) 92 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3059 rs16941 BRCA1 672 17 38497961 NM_007302 NP_009233 A/G E997G minus 3176017 619 WICVAR MITOGPOP6 CORIELL Mixed 54 0.02 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3060 rs16941 BRCA1 672 17 38497961 NM_007302 NP_009233 A/G E997G minus 5586284 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3061 rs16941 BRCA1 672 17 38497961 NM_007302 NP_009233 A/G E997G minus 5586284 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3062 rs16941 BRCA1 672 17 38497961 NM_007302 NP_009233 A/G E997G minus 5586284 776 SNP500CANCER AFR1 African / African-American (24) 48 0.08 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3063 rs16941 BRCA1 672 17 38497961 NM_007302 NP_009233 A/G E997G minus 5586284 777 SNP500CANCER HISP1 Hispanic (23) 46 0.33 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3064 rs16941 BRCA1 672 17 38497961 NM_007302 NP_009233 A/G E997G minus 5586284 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.3 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3065 rs16941 BRCA1 672 17 38497961 NM_007302 NP_009233 A/G E997G minus 8486259 693 EGP_SNPS PDR90 NIHPDR 174 0.32 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3066 rs16941 BRCA1 672 17 38497961 NM_007302 NP_009233 A/G E997G minus 8486259 1303 SEQUENOM CEPH CEPH (92) 92 0.26 117 "by cluster,freq" 17q21 "breast cancer 1, early onset" 3067 rs16942 BRCA1 672 17 38497526 NM_007294 NP_009225 A/G K1183R minus 19349 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3068 rs16942 BRCA1 672 17 38497526 NM_007294 NP_009225 A/G K1183R minus 3172563 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 64 0.13 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3069 rs16942 BRCA1 672 17 38497526 NM_007294 NP_009225 A/G K1183R minus 5586285 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3070 rs16942 BRCA1 672 17 38497526 NM_007294 NP_009225 A/G K1183R minus 5586285 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3071 rs16942 BRCA1 672 17 38497526 NM_007294 NP_009225 A/G K1183R minus 5586285 776 SNP500CANCER AFR1 African / African-American (24) 48 0.23 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3072 rs16942 BRCA1 672 17 38497526 NM_007294 NP_009225 A/G K1183R minus 5586285 777 SNP500CANCER HISP1 Hispanic (23) 44 0.3 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3073 rs16942 BRCA1 672 17 38497526 NM_007294 NP_009225 A/G K1183R minus 5586285 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3074 rs16942 BRCA1 672 17 38497526 NM_007294 NP_009225 A/G K1183R minus 8486262 693 EGP_SNPS PDR90 NIHPDR 170 0.33 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3075 rs16942 BRCA1 672 17 38497526 NM_007294 NP_009225 A/G K1183R minus 24588209 1371 PERLEGEN AFD_EUR_PANEL European American (24) 40 0.43 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3076 rs16942 BRCA1 672 17 38497526 NM_007294 NP_009225 A/G K1183R minus 24588209 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.16 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3077 rs16942 BRCA1 672 17 38497526 NM_007294 NP_009225 A/G K1183R minus 24588209 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3078 rs16942 BRCA1 672 17 38497526 NM_007295 NP_009226 A/G K1183R minus 19349 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3079 rs16942 BRCA1 672 17 38497526 NM_007295 NP_009226 A/G K1183R minus 3172563 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 64 0.13 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3080 rs16942 BRCA1 672 17 38497526 NM_007295 NP_009226 A/G K1183R minus 5586285 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3081 rs16942 BRCA1 672 17 38497526 NM_007295 NP_009226 A/G K1183R minus 5586285 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3082 rs16942 BRCA1 672 17 38497526 NM_007295 NP_009226 A/G K1183R minus 5586285 776 SNP500CANCER AFR1 African / African-American (24) 48 0.23 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3083 rs16942 BRCA1 672 17 38497526 NM_007295 NP_009226 A/G K1183R minus 5586285 777 SNP500CANCER HISP1 Hispanic (23) 44 0.3 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3084 rs16942 BRCA1 672 17 38497526 NM_007295 NP_009226 A/G K1183R minus 5586285 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3085 rs16942 BRCA1 672 17 38497526 NM_007295 NP_009226 A/G K1183R minus 8486262 693 EGP_SNPS PDR90 NIHPDR 170 0.33 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3086 rs16942 BRCA1 672 17 38497526 NM_007295 NP_009226 A/G K1183R minus 24588209 1371 PERLEGEN AFD_EUR_PANEL European American (24) 40 0.43 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3087 rs16942 BRCA1 672 17 38497526 NM_007295 NP_009226 A/G K1183R minus 24588209 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.16 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3088 rs16942 BRCA1 672 17 38497526 NM_007295 NP_009226 A/G K1183R minus 24588209 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3089 rs16942 BRCA1 672 17 38497526 NM_007296 NP_009227 A/G K1183R minus 19349 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3090 rs16942 BRCA1 672 17 38497526 NM_007296 NP_009227 A/G K1183R minus 3172563 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 64 0.13 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3091 rs16942 BRCA1 672 17 38497526 NM_007296 NP_009227 A/G K1183R minus 5586285 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3092 rs16942 BRCA1 672 17 38497526 NM_007296 NP_009227 A/G K1183R minus 5586285 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3093 rs16942 BRCA1 672 17 38497526 NM_007296 NP_009227 A/G K1183R minus 5586285 776 SNP500CANCER AFR1 African / African-American (24) 48 0.23 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3094 rs16942 BRCA1 672 17 38497526 NM_007296 NP_009227 A/G K1183R minus 5586285 777 SNP500CANCER HISP1 Hispanic (23) 44 0.3 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3095 rs16942 BRCA1 672 17 38497526 NM_007296 NP_009227 A/G K1183R minus 5586285 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3096 rs16942 BRCA1 672 17 38497526 NM_007296 NP_009227 A/G K1183R minus 8486262 693 EGP_SNPS PDR90 NIHPDR 170 0.33 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3097 rs16942 BRCA1 672 17 38497526 NM_007296 NP_009227 A/G K1183R minus 24588209 1371 PERLEGEN AFD_EUR_PANEL European American (24) 40 0.43 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3098 rs16942 BRCA1 672 17 38497526 NM_007296 NP_009227 A/G K1183R minus 24588209 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.16 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3099 rs16942 BRCA1 672 17 38497526 NM_007296 NP_009227 A/G K1183R minus 24588209 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3100 rs16942 BRCA1 672 17 38497526 NM_007297 NP_009228 A/G K887R minus 19349 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3101 rs16942 BRCA1 672 17 38497526 NM_007297 NP_009228 A/G K887R minus 3172563 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 64 0.13 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3102 rs16942 BRCA1 672 17 38497526 NM_007297 NP_009228 A/G K887R minus 5586285 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3103 rs16942 BRCA1 672 17 38497526 NM_007297 NP_009228 A/G K887R minus 5586285 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3104 rs16942 BRCA1 672 17 38497526 NM_007297 NP_009228 A/G K887R minus 5586285 776 SNP500CANCER AFR1 African / African-American (24) 48 0.23 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3105 rs16942 BRCA1 672 17 38497526 NM_007297 NP_009228 A/G K887R minus 5586285 777 SNP500CANCER HISP1 Hispanic (23) 44 0.3 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3106 rs16942 BRCA1 672 17 38497526 NM_007297 NP_009228 A/G K887R minus 5586285 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3107 rs16942 BRCA1 672 17 38497526 NM_007297 NP_009228 A/G K887R minus 8486262 693 EGP_SNPS PDR90 NIHPDR 170 0.33 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3108 rs16942 BRCA1 672 17 38497526 NM_007297 NP_009228 A/G K887R minus 24588209 1371 PERLEGEN AFD_EUR_PANEL European American (24) 40 0.43 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3109 rs16942 BRCA1 672 17 38497526 NM_007297 NP_009228 A/G K887R minus 24588209 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.16 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3110 rs16942 BRCA1 672 17 38497526 NM_007297 NP_009228 A/G K887R minus 24588209 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3111 rs16942 BRCA1 672 17 38497526 NM_007299 NP_009230 A/G K1183R minus 19349 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3112 rs16942 BRCA1 672 17 38497526 NM_007299 NP_009230 A/G K1183R minus 3172563 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 64 0.13 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3113 rs16942 BRCA1 672 17 38497526 NM_007299 NP_009230 A/G K1183R minus 5586285 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3114 rs16942 BRCA1 672 17 38497526 NM_007299 NP_009230 A/G K1183R minus 5586285 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3115 rs16942 BRCA1 672 17 38497526 NM_007299 NP_009230 A/G K1183R minus 5586285 776 SNP500CANCER AFR1 African / African-American (24) 48 0.23 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3116 rs16942 BRCA1 672 17 38497526 NM_007299 NP_009230 A/G K1183R minus 5586285 777 SNP500CANCER HISP1 Hispanic (23) 44 0.3 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3117 rs16942 BRCA1 672 17 38497526 NM_007299 NP_009230 A/G K1183R minus 5586285 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3118 rs16942 BRCA1 672 17 38497526 NM_007299 NP_009230 A/G K1183R minus 8486262 693 EGP_SNPS PDR90 NIHPDR 170 0.33 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3119 rs16942 BRCA1 672 17 38497526 NM_007299 NP_009230 A/G K1183R minus 24588209 1371 PERLEGEN AFD_EUR_PANEL European American (24) 40 0.43 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3120 rs16942 BRCA1 672 17 38497526 NM_007299 NP_009230 A/G K1183R minus 24588209 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.16 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3121 rs16942 BRCA1 672 17 38497526 NM_007299 NP_009230 A/G K1183R minus 24588209 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3122 rs16942 BRCA1 672 17 38497526 NM_007300 NP_009231 A/G K1183R minus 19349 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3123 rs16942 BRCA1 672 17 38497526 NM_007300 NP_009231 A/G K1183R minus 3172563 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 64 0.13 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3124 rs16942 BRCA1 672 17 38497526 NM_007300 NP_009231 A/G K1183R minus 5586285 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3125 rs16942 BRCA1 672 17 38497526 NM_007300 NP_009231 A/G K1183R minus 5586285 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3126 rs16942 BRCA1 672 17 38497526 NM_007300 NP_009231 A/G K1183R minus 5586285 776 SNP500CANCER AFR1 African / African-American (24) 48 0.23 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3127 rs16942 BRCA1 672 17 38497526 NM_007300 NP_009231 A/G K1183R minus 5586285 777 SNP500CANCER HISP1 Hispanic (23) 44 0.3 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3128 rs16942 BRCA1 672 17 38497526 NM_007300 NP_009231 A/G K1183R minus 5586285 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3129 rs16942 BRCA1 672 17 38497526 NM_007300 NP_009231 A/G K1183R minus 8486262 693 EGP_SNPS PDR90 NIHPDR 170 0.33 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3130 rs16942 BRCA1 672 17 38497526 NM_007300 NP_009231 A/G K1183R minus 24588209 1371 PERLEGEN AFD_EUR_PANEL European American (24) 40 0.43 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3131 rs16942 BRCA1 672 17 38497526 NM_007300 NP_009231 A/G K1183R minus 24588209 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.16 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3132 rs16942 BRCA1 672 17 38497526 NM_007300 NP_009231 A/G K1183R minus 24588209 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3133 rs16942 BRCA1 672 17 38497526 NM_007301 NP_009232 A/G K1183R minus 19349 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3134 rs16942 BRCA1 672 17 38497526 NM_007301 NP_009232 A/G K1183R minus 3172563 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 64 0.13 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3135 rs16942 BRCA1 672 17 38497526 NM_007301 NP_009232 A/G K1183R minus 5586285 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3136 rs16942 BRCA1 672 17 38497526 NM_007301 NP_009232 A/G K1183R minus 5586285 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3137 rs16942 BRCA1 672 17 38497526 NM_007301 NP_009232 A/G K1183R minus 5586285 776 SNP500CANCER AFR1 African / African-American (24) 48 0.23 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3138 rs16942 BRCA1 672 17 38497526 NM_007301 NP_009232 A/G K1183R minus 5586285 777 SNP500CANCER HISP1 Hispanic (23) 44 0.3 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3139 rs16942 BRCA1 672 17 38497526 NM_007301 NP_009232 A/G K1183R minus 5586285 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3140 rs16942 BRCA1 672 17 38497526 NM_007301 NP_009232 A/G K1183R minus 8486262 693 EGP_SNPS PDR90 NIHPDR 170 0.33 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3141 rs16942 BRCA1 672 17 38497526 NM_007301 NP_009232 A/G K1183R minus 24588209 1371 PERLEGEN AFD_EUR_PANEL European American (24) 40 0.43 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3142 rs16942 BRCA1 672 17 38497526 NM_007301 NP_009232 A/G K1183R minus 24588209 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.16 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3143 rs16942 BRCA1 672 17 38497526 NM_007301 NP_009232 A/G K1183R minus 24588209 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3144 rs16942 BRCA1 672 17 38497526 NM_007302 NP_009233 A/G K1142R minus 19349 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3145 rs16942 BRCA1 672 17 38497526 NM_007302 NP_009233 A/G K1142R minus 3172563 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 64 0.13 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3146 rs16942 BRCA1 672 17 38497526 NM_007302 NP_009233 A/G K1142R minus 5586285 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3147 rs16942 BRCA1 672 17 38497526 NM_007302 NP_009233 A/G K1142R minus 5586285 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.32 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3148 rs16942 BRCA1 672 17 38497526 NM_007302 NP_009233 A/G K1142R minus 5586285 776 SNP500CANCER AFR1 African / African-American (24) 48 0.23 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3149 rs16942 BRCA1 672 17 38497526 NM_007302 NP_009233 A/G K1142R minus 5586285 777 SNP500CANCER HISP1 Hispanic (23) 44 0.3 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3150 rs16942 BRCA1 672 17 38497526 NM_007302 NP_009233 A/G K1142R minus 5586285 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.29 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3151 rs16942 BRCA1 672 17 38497526 NM_007302 NP_009233 A/G K1142R minus 8486262 693 EGP_SNPS PDR90 NIHPDR 170 0.33 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3152 rs16942 BRCA1 672 17 38497526 NM_007302 NP_009233 A/G K1142R minus 24588209 1371 PERLEGEN AFD_EUR_PANEL European American (24) 40 0.43 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3153 rs16942 BRCA1 672 17 38497526 NM_007302 NP_009233 A/G K1142R minus 24588209 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.16 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3154 rs16942 BRCA1 672 17 38497526 NM_007302 NP_009233 A/G K1142R minus 24588209 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "by submitter,freq,cluster" 17q21 "breast cancer 1, early onset" 3155 rs17118 XYLB 9942 3 38379476 NM_005108 NP_005099 A/C D85E plus 745904 1303 SEQUENOM CEPH CEPH (92) 92 0.46 123 "by doubleHit,freq,cluster" 3p22-p21.3 xylulokinase homolog (H. influenzae) 3156 rs17118 XYLB 9942 3 38379476 NM_005108 NP_005099 A/C D85E plus 3212294 738 YUSUKE JBIC-ALLELE Japanese (752) 1290 0.21 123 "by doubleHit,freq,cluster" 3p22-p21.3 xylulokinase homolog (H. influenzae) 3157 rs17118 XYLB 9942 3 38379476 NM_005108 NP_005099 A/C D85E plus 23885992 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.24 123 "by doubleHit,freq,cluster" 3p22-p21.3 xylulokinase homolog (H. influenzae) 3158 rs17118 XYLB 9942 3 38379476 NM_005108 NP_005099 A/C D85E plus 23885992 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.16 123 "by doubleHit,freq,cluster" 3p22-p21.3 xylulokinase homolog (H. influenzae) 3159 rs17118 XYLB 9942 3 38379476 NM_005108 NP_005099 A/C D85E plus 23885992 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 42 0.29 123 "by doubleHit,freq,cluster" 3p22-p21.3 xylulokinase homolog (H. influenzae) 3160 rs17456 FDPS 2224 1 152103384 NM_002004 NP_001995 C/T I391V minus 20086 1303 SEQUENOM CEPH CEPH (92) 92 0.04 60 by freq 1q22 "farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase)" 3161 rs17560 ANG 283 14 20231813 NM_001145 NP_001136 A/G K84E plus 20171 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.1 123 by freq 14q11.1-q11.2 "angiogenin, ribonuclease, RNase A family, 5" 3162 rs17560 ANG 283 14 20231813 NM_001145 NP_001136 A/G K84E plus 20171 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 14q11.1-q11.2 "angiogenin, ribonuclease, RNase A family, 5" 3163 rs17560 ANG 283 14 20231813 NM_001145 NP_001136 A/G K84E plus 23815010 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 by freq 14q11.1-q11.2 "angiogenin, ribonuclease, RNase A family, 5" 3164 rs17560 ANG 283 14 20231813 NM_001145 NP_001136 A/G K84E plus 23815010 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 by freq 14q11.1-q11.2 "angiogenin, ribonuclease, RNase A family, 5" 3165 rs17560 ANG 283 14 20231813 NM_001145 NP_001136 A/G K84E plus 23815010 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 by freq 14q11.1-q11.2 "angiogenin, ribonuclease, RNase A family, 5" 3166 rs17561 IL1A 3552 2 113253454 NM_000575 NP_000566 G/T A114S minus 20172 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.33 113 "HapMap,submitter,freq,cluster" 2q14 "interleukin 1, alpha" 3167 rs17561 IL1A 3552 2 113253454 NM_000575 NP_000566 G/T A114S minus 4969895 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.19 113 "HapMap,submitter,freq,cluster" 2q14 "interleukin 1, alpha" 3168 rs17561 IL1A 3552 2 113253454 NM_000575 NP_000566 G/T A114S minus 4969895 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.33 113 "HapMap,submitter,freq,cluster" 2q14 "interleukin 1, alpha" 3169 rs17561 IL1A 3552 2 113253454 NM_000575 NP_000566 G/T A114S minus 4969895 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.31 113 "HapMap,submitter,freq,cluster" 2q14 "interleukin 1, alpha" 3170 rs17561 IL1A 3552 2 113253454 NM_000575 NP_000566 G/T A114S minus 4969895 1303 SEQUENOM CEPH CEPH (92) 92 0.48 113 "HapMap,submitter,freq,cluster" 2q14 "interleukin 1, alpha" 3171 rs17561 IL1A 3552 2 113253454 NM_000575 NP_000566 G/T A114S minus 5586646 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.24 113 "HapMap,submitter,freq,cluster" 2q14 "interleukin 1, alpha" 3172 rs17561 IL1A 3552 2 113253454 NM_000575 NP_000566 G/T A114S minus 5586646 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.36 113 "HapMap,submitter,freq,cluster" 2q14 "interleukin 1, alpha" 3173 rs17561 IL1A 3552 2 113253454 NM_000575 NP_000566 G/T A114S minus 5586646 776 SNP500CANCER AFR1 African / African-American (24) 48 0.23 113 "HapMap,submitter,freq,cluster" 2q14 "interleukin 1, alpha" 3174 rs17561 IL1A 3552 2 113253454 NM_000575 NP_000566 G/T A114S minus 5586646 777 SNP500CANCER HISP1 Hispanic (23) 46 0.2 113 "HapMap,submitter,freq,cluster" 2q14 "interleukin 1, alpha" 3175 rs17561 IL1A 3552 2 113253454 NM_000575 NP_000566 G/T A114S minus 5586646 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.15 113 "HapMap,submitter,freq,cluster" 2q14 "interleukin 1, alpha" 3176 rs17562 IL1A 3552 2 113253421 NM_000575 NP_000566 A/G N125D minus 20173 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.03 113 "by cluster,freq" 2q14 "interleukin 1, alpha" 3177 rs17562 IL1A 3552 2 113253421 NM_000575 NP_000566 A/G N125D minus 5586648 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.01 113 "by cluster,freq" 2q14 "interleukin 1, alpha" 3178 rs17562 IL1A 3552 2 113253421 NM_000575 NP_000566 A/G N125D minus 5586648 775 SNP500CANCER CAUC1 Caucasian (31) 62 1 113 "by cluster,freq" 2q14 "interleukin 1, alpha" 3179 rs17562 IL1A 3552 2 113253421 NM_000575 NP_000566 A/G N125D minus 5586648 776 SNP500CANCER AFR1 African / African-American (24) 48 0.06 113 "by cluster,freq" 2q14 "interleukin 1, alpha" 3180 rs17562 IL1A 3552 2 113253421 NM_000575 NP_000566 A/G N125D minus 5586648 777 SNP500CANCER HISP1 Hispanic (23) 46 1 113 "by cluster,freq" 2q14 "interleukin 1, alpha" 3181 rs17562 IL1A 3552 2 113253421 NM_000575 NP_000566 A/G N125D minus 5586648 778 SNP500CANCER PAC1 Pacific Rim (24) 48 1 113 "by cluster,freq" 2q14 "interleukin 1, alpha" 3182 rs17562 IL1A 3552 2 113253421 NM_000575 NP_000566 A/G N125D minus 5586648 1303 SEQUENOM CEPH CEPH (92) 92 1 113 "by cluster,freq" 2q14 "interleukin 1, alpha" 3183 rs17563 BMP4 652 14 53487272 NM_001202 NP_001193 C/T V152A minus 20174 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 38 0.33 120 "HapMap,doubleHit,submitter,freq,cluster" 14q22-q23 bone morphogenetic protein 4 3184 rs17563 BMP4 652 14 53487272 NM_001202 NP_001193 C/T V152A minus 4042672 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.39 120 "HapMap,doubleHit,submitter,freq,cluster" 14q22-q23 bone morphogenetic protein 4 3185 rs17563 BMP4 652 14 53487272 NM_001202 NP_001193 C/T V152A minus 4042672 1303 SEQUENOM CEPH CEPH (92) 92 0.38 120 "HapMap,doubleHit,submitter,freq,cluster" 14q22-q23 bone morphogenetic protein 4 3186 rs17563 BMP4 652 14 53487272 NM_130850 NP_570911 C/T V152A minus 20174 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 38 0.33 120 "HapMap,doubleHit,submitter,freq,cluster" 14q22-q23 bone morphogenetic protein 4 3187 rs17563 BMP4 652 14 53487272 NM_130850 NP_570911 C/T V152A minus 4042672 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.39 120 "HapMap,doubleHit,submitter,freq,cluster" 14q22-q23 bone morphogenetic protein 4 3188 rs17563 BMP4 652 14 53487272 NM_130850 NP_570911 C/T V152A minus 4042672 1303 SEQUENOM CEPH CEPH (92) 92 0.38 120 "HapMap,doubleHit,submitter,freq,cluster" 14q22-q23 bone morphogenetic protein 4 3189 rs17563 BMP4 652 14 53487272 NM_130851 NP_570912 C/T V152A minus 20174 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 38 0.33 120 "HapMap,doubleHit,submitter,freq,cluster" 14q22-q23 bone morphogenetic protein 4 3190 rs17563 BMP4 652 14 53487272 NM_130851 NP_570912 C/T V152A minus 4042672 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.39 120 "HapMap,doubleHit,submitter,freq,cluster" 14q22-q23 bone morphogenetic protein 4 3191 rs17563 BMP4 652 14 53487272 NM_130851 NP_570912 C/T V152A minus 4042672 1303 SEQUENOM CEPH CEPH (92) 92 0.38 120 "HapMap,doubleHit,submitter,freq,cluster" 14q22-q23 bone morphogenetic protein 4 3192 rs17567 EPS15 2060 1 51538942 NM_001981 NP_001972 C/T I822M plus 20178 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.33 123 "by doubleHit,freq,cluster" 1p32 epidermal growth factor receptor pathway substrate 15 3193 rs17567 EPS15 2060 1 51538942 NM_001981 NP_001972 C/T I822M plus 2755092 1303 SEQUENOM CEPH CEPH (92) 92 0.17 123 "by doubleHit,freq,cluster" 1p32 epidermal growth factor receptor pathway substrate 15 3194 rs17571 CTSD 1509 11 1739170 NM_001909 NP_001900 C/T A58V minus 20182 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.1 63 "HapMap,freq" 11p15.5 cathepsin D (lysosomal aspartyl protease) 3195 rs17571 CTSD 1509 11 1739170 NM_001909 NP_001900 C/T A58V minus 20182 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.07 63 "HapMap,freq" 11p15.5 cathepsin D (lysosomal aspartyl protease) 3196 rs17571 CTSD 1509 11 1739170 NM_001909 NP_001900 C/T A58V minus 20182 1303 SEQUENOM CEPH CEPH (92) 92 0.08 63 "HapMap,freq" 11p15.5 cathepsin D (lysosomal aspartyl protease) 3197 rs17580 SERPINA1 5265 14 93917015 NM_000295 NP_000286 A/T E288V minus 20191 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 38 0.03 123 by freq 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 3198 rs17580 SERPINA1 5265 14 93917015 NM_000295 NP_000286 A/T E288V minus 3881969 1303 SEQUENOM CEPH CEPH (92) 92 0.08 123 by freq 14q32.1 "serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1" 3199 rs17607 CD68 968 17 7425506 NM_001251 NP_001242 A/G A340T plus 20219 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 38 0.03 63 "HapMap,freq" 17p13 CD68 antigen 3200 rs17607 CD68 968 17 7425506 NM_001251 NP_001242 A/G A340T plus 20219 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.06 63 "HapMap,freq" 17p13 CD68 antigen 3201 rs17607 CD68 968 17 7425506 NM_001251 NP_001242 A/G A340T plus 20219 1303 SEQUENOM CEPH CEPH (92) 92 0.06 63 "HapMap,freq" 17p13 CD68 antigen 3202 rs17608 CLC 1178 19 44917486 NM_001828 NP_001819 C/T A28V minus 20220 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 38 0.33 123 by freq 19q13.1 Charcot-Leyden crystal protein 3203 rs17608 CLC 1178 19 44917486 NM_001828 NP_001819 C/T A28V minus 477759 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.46 123 by freq 19q13.1 Charcot-Leyden crystal protein 3204 rs17608 CLC 1178 19 44917486 NM_001828 NP_001819 C/T A28V minus 477759 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 20 0.3 123 by freq 19q13.1 Charcot-Leyden crystal protein 3205 rs17608 CLC 1178 19 44917486 NM_001828 NP_001819 C/T A28V minus 477759 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.21 123 by freq 19q13.1 Charcot-Leyden crystal protein 3206 rs17608 CLC 1178 19 44917486 NM_001828 NP_001819 C/T A28V minus 477759 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 82 0.33 123 by freq 19q13.1 Charcot-Leyden crystal protein 3207 rs17608 CLC 1178 19 44917486 NM_001828 NP_001819 C/T A28V minus 477759 1303 SEQUENOM CEPH CEPH (92) 92 0.41 123 by freq 19q13.1 Charcot-Leyden crystal protein 3208 rs17608 CLC 1178 19 44917486 NM_001828 NP_001819 C/T A28V minus 24683968 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.43 123 by freq 19q13.1 Charcot-Leyden crystal protein 3209 rs17608 CLC 1178 19 44917486 NM_001828 NP_001819 C/T A28V minus 24683968 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.22 123 by freq 19q13.1 Charcot-Leyden crystal protein 3210 rs17608 CLC 1178 19 44917486 NM_001828 NP_001819 C/T A28V minus 24683968 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.23 123 by freq 19q13.1 Charcot-Leyden crystal protein 3211 rs17611 C5 727 9 120848754 NM_001735 NP_001726 A/G V802I minus 20223 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.33 121 "HapMap,doubleHit,submitter,freq,cluster" 9q33-q34 complement component 5 3212 rs17611 C5 727 9 120848754 NM_001735 NP_001726 A/G V802I minus 4094354 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.37 121 "HapMap,doubleHit,submitter,freq,cluster" 9q33-q34 complement component 5 3213 rs17611 C5 727 9 120848754 NM_001735 NP_001726 A/G V802I minus 4975679 738 YUSUKE JBIC-ALLELE Japanese (752) 1462 0.5 121 "HapMap,doubleHit,submitter,freq,cluster" 9q33-q34 complement component 5 3214 rs17613 C8G 733 9 137116397 NM_000606 NP_000597 A/C H124N plus 20225 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 38 0.33 123 by freq 9q34.3 "complement component 8, gamma polypeptide" 3215 rs17613 C8G 733 9 137116397 NM_000606 NP_000597 A/C H124N plus 24810928 1303 SEQUENOM CEPH CEPH (92) 184 0.02 123 by freq 9q34.3 "complement component 8, gamma polypeptide" 3216 rs17615 CR2 1380 1 204034857 NM_001877 NP_001868 A/G S639N plus 20227 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.33 123 "by doubleHit,freq,cluster" 1q32 complement component (3d/Epstein Barr virus) receptor 2 3217 rs17615 CR2 1380 1 204034857 NM_001877 NP_001868 A/G S639N plus 3210393 738 YUSUKE JBIC-ALLELE Japanese (752) 1456 0.14 123 "by doubleHit,freq,cluster" 1q32 complement component (3d/Epstein Barr virus) receptor 2 3218 rs17615 CR2 1380 1 204034857 NM_001877 NP_001868 A/G S639N plus 23669121 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "by doubleHit,freq,cluster" 1q32 complement component (3d/Epstein Barr virus) receptor 2 3219 rs17615 CR2 1380 1 204034857 NM_001877 NP_001868 A/G S639N plus 23669121 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "by doubleHit,freq,cluster" 1q32 complement component (3d/Epstein Barr virus) receptor 2 3220 rs17615 CR2 1380 1 204034857 NM_001877 NP_001868 A/G S639N plus 23669121 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.1 123 "by doubleHit,freq,cluster" 1q32 complement component (3d/Epstein Barr virus) receptor 2 3221 rs17621 DDO 8528 6 110821009 NM_003649 NP_003640 C/T H258Y minus 20233 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.1 123 by freq 6q22.1 D-aspartate oxidase 3222 rs17621 DDO 8528 6 110821009 NM_003649 NP_003640 C/T H258Y minus 20233 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 6q22.1 D-aspartate oxidase 3223 rs17621 DDO 8528 6 110821009 NM_003649 NP_003640 C/T H258Y minus 23455312 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 by freq 6q22.1 D-aspartate oxidase 3224 rs17621 DDO 8528 6 110821009 NM_003649 NP_003640 C/T H258Y minus 23455312 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 by freq 6q22.1 D-aspartate oxidase 3225 rs17621 DDO 8528 6 110821009 NM_003649 NP_003640 C/T H258Y minus 23455312 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 by freq 6q22.1 D-aspartate oxidase 3226 rs17621 DDO 8528 6 110821009 NM_004032 NP_004023 C/T H199Y minus 20233 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.1 123 by freq 6q22.1 D-aspartate oxidase 3227 rs17621 DDO 8528 6 110821009 NM_004032 NP_004023 C/T H199Y minus 20233 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 6q22.1 D-aspartate oxidase 3228 rs17621 DDO 8528 6 110821009 NM_004032 NP_004023 C/T H199Y minus 23455312 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 by freq 6q22.1 D-aspartate oxidase 3229 rs17621 DDO 8528 6 110821009 NM_004032 NP_004023 C/T H199Y minus 23455312 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 by freq 6q22.1 D-aspartate oxidase 3230 rs17621 DDO 8528 6 110821009 NM_004032 NP_004023 C/T H199Y minus 23455312 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 by freq 6q22.1 D-aspartate oxidase 3231 rs17622 DDO 8528 6 110821132 NM_003649 NP_003640 C/G Q217E minus 20234 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.1 123 by freq 6q22.1 D-aspartate oxidase 3232 rs17622 DDO 8528 6 110821132 NM_003649 NP_003640 C/G Q217E minus 20234 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 6q22.1 D-aspartate oxidase 3233 rs17622 DDO 8528 6 110821132 NM_003649 NP_003640 C/G Q217E minus 23455325 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 by freq 6q22.1 D-aspartate oxidase 3234 rs17622 DDO 8528 6 110821132 NM_003649 NP_003640 C/G Q217E minus 23455325 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 by freq 6q22.1 D-aspartate oxidase 3235 rs17622 DDO 8528 6 110821132 NM_003649 NP_003640 C/G Q217E minus 23455325 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 by freq 6q22.1 D-aspartate oxidase 3236 rs17622 DDO 8528 6 110821132 NM_004032 NP_004023 C/G Q158E minus 20234 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.1 123 by freq 6q22.1 D-aspartate oxidase 3237 rs17622 DDO 8528 6 110821132 NM_004032 NP_004023 C/G Q158E minus 20234 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 6q22.1 D-aspartate oxidase 3238 rs17622 DDO 8528 6 110821132 NM_004032 NP_004023 C/G Q158E minus 23455325 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 by freq 6q22.1 D-aspartate oxidase 3239 rs17622 DDO 8528 6 110821132 NM_004032 NP_004023 C/G Q158E minus 23455325 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 by freq 6q22.1 D-aspartate oxidase 3240 rs17622 DDO 8528 6 110821132 NM_004032 NP_004023 C/G Q158E minus 23455325 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 by freq 6q22.1 D-aspartate oxidase 3241 rs17623 DDO 8528 6 110820933 NM_003649 NP_003640 G/T L283R minus 20235 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.1 123 by freq 6q22.1 D-aspartate oxidase 3242 rs17623 DDO 8528 6 110820933 NM_003649 NP_003640 G/T L283R minus 20235 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 6q22.1 D-aspartate oxidase 3243 rs17623 DDO 8528 6 110820933 NM_003649 NP_003640 G/T L283R minus 23455300 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 by freq 6q22.1 D-aspartate oxidase 3244 rs17623 DDO 8528 6 110820933 NM_003649 NP_003640 G/T L283R minus 23455300 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 by freq 6q22.1 D-aspartate oxidase 3245 rs17623 DDO 8528 6 110820933 NM_003649 NP_003640 G/T L283R minus 23455300 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 by freq 6q22.1 D-aspartate oxidase 3246 rs17623 DDO 8528 6 110820933 NM_004032 NP_004023 G/T L224R minus 20235 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.1 123 by freq 6q22.1 D-aspartate oxidase 3247 rs17623 DDO 8528 6 110820933 NM_004032 NP_004023 G/T L224R minus 20235 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 6q22.1 D-aspartate oxidase 3248 rs17623 DDO 8528 6 110820933 NM_004032 NP_004023 G/T L224R minus 23455300 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 by freq 6q22.1 D-aspartate oxidase 3249 rs17623 DDO 8528 6 110820933 NM_004032 NP_004023 G/T L224R minus 23455300 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 by freq 6q22.1 D-aspartate oxidase 3250 rs17623 DDO 8528 6 110820933 NM_004032 NP_004023 G/T L224R minus 23455300 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 by freq 6q22.1 D-aspartate oxidase 3251 rs17655 ERCC5 2073 13 102326003 NM_000123 NP_000114 C/G D1104H minus 2924028 506 NCBI NIHPDR NIHPDR 80 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 13q22 "excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))" 3252 rs17655 ERCC5 2073 13 102326003 NM_000123 NP_000114 C/G D1104H minus 3172481 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 40 0.28 123 "HapMap,doubleHit,submitter,freq,cluster" 13q22 "excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))" 3253 rs17655 ERCC5 2073 13 102326003 NM_000123 NP_000114 C/G D1104H minus 5586520 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 13q22 "excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))" 3254 rs17655 ERCC5 2073 13 102326003 NM_000123 NP_000114 C/G D1104H minus 5586520 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.15 123 "HapMap,doubleHit,submitter,freq,cluster" 13q22 "excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))" 3255 rs17655 ERCC5 2073 13 102326003 NM_000123 NP_000114 C/G D1104H minus 5586520 776 SNP500CANCER AFR1 African / African-American (24) 48 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 13q22 "excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))" 3256 rs17655 ERCC5 2073 13 102326003 NM_000123 NP_000114 C/G D1104H minus 5586520 777 SNP500CANCER HISP1 Hispanic (23) 46 0.28 123 "HapMap,doubleHit,submitter,freq,cluster" 13q22 "excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))" 3257 rs17655 ERCC5 2073 13 102326003 NM_000123 NP_000114 C/G D1104H minus 5586520 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 13q22 "excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))" 3258 rs17655 ERCC5 2073 13 102326003 NM_000123 NP_000114 C/G D1104H minus 5605326 693 EGP_SNPS PDR90 NIHPDR 178 0.38 123 "HapMap,doubleHit,submitter,freq,cluster" 13q22 "excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))" 3259 rs17655 ERCC5 2073 13 102326003 NM_000123 NP_000114 C/G D1104H minus 5605326 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.27 123 "HapMap,doubleHit,submitter,freq,cluster" 13q22 "excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))" 3260 rs17655 ERCC5 2073 13 102326003 NM_000123 NP_000114 C/G D1104H minus 5605326 1303 SEQUENOM CEPH CEPH (92) 92 0.21 123 "HapMap,doubleHit,submitter,freq,cluster" 13q22 "excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))" 3261 rs17655 ERCC5 2073 13 102326003 NM_000123 NP_000114 C/G D1104H minus 23280293 1371 PERLEGEN AFD_EUR_PANEL European American (24) 40 0.25 123 "HapMap,doubleHit,submitter,freq,cluster" 13q22 "excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))" 3262 rs17655 ERCC5 2073 13 102326003 NM_000123 NP_000114 C/G D1104H minus 23280293 1372 PERLEGEN AFD_AFR_PANEL African American (24) 21 0.5 123 "HapMap,doubleHit,submitter,freq,cluster" 13q22 "excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))" 3263 rs17655 ERCC5 2073 13 102326003 NM_000123 NP_000114 C/G D1104H minus 23280293 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.39 123 "HapMap,doubleHit,submitter,freq,cluster" 13q22 "excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))" 3264 rs20541 IL13 3596 5 132023863 NM_002188 NP_002179 C/T Q144R minus 23200 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 36 0.33 123 "by doubleHit,freq,cluster" 5q31 interleukin 13 3265 rs20541 IL13 3596 5 132023863 NM_002188 NP_002179 C/T Q144R minus 2981853 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 42 0.12 123 "by doubleHit,freq,cluster" 5q31 interleukin 13 3266 rs20541 IL13 3596 5 132023863 NM_002188 NP_002179 C/T Q144R minus 2981853 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 44 0.27 123 "by doubleHit,freq,cluster" 5q31 interleukin 13 3267 rs20541 IL13 3596 5 132023863 NM_002188 NP_002179 C/T Q144R minus 4323324 649 FHCRC POPU1 USA (20) 40 0.23 123 "by doubleHit,freq,cluster" 5q31 interleukin 13 3268 rs20541 IL13 3596 5 132023863 NM_002188 NP_002179 C/T Q144R minus 5586633 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.2 123 "by doubleHit,freq,cluster" 5q31 interleukin 13 3269 rs20541 IL13 3596 5 132023863 NM_002188 NP_002179 C/T Q144R minus 5586633 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.15 123 "by doubleHit,freq,cluster" 5q31 interleukin 13 3270 rs20541 IL13 3596 5 132023863 NM_002188 NP_002179 C/T Q144R minus 5586633 776 SNP500CANCER AFR1 African / African-American (24) 48 0.13 123 "by doubleHit,freq,cluster" 5q31 interleukin 13 3271 rs20541 IL13 3596 5 132023863 NM_002188 NP_002179 C/T Q144R minus 5586633 777 SNP500CANCER HISP1 Hispanic (23) 46 0.26 123 "by doubleHit,freq,cluster" 5q31 interleukin 13 3272 rs20541 IL13 3596 5 132023863 NM_002188 NP_002179 C/T Q144R minus 5586633 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.27 123 "by doubleHit,freq,cluster" 5q31 interleukin 13 3273 rs20541 IL13 3596 5 132023863 NM_002188 NP_002179 C/T Q144R minus 24193850 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.23 123 "by doubleHit,freq,cluster" 5q31 interleukin 13 3274 rs20541 IL13 3596 5 132023863 NM_002188 NP_002179 C/T Q144R minus 24193850 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "by doubleHit,freq,cluster" 5q31 interleukin 13 3275 rs20541 IL13 3596 5 132023863 NM_002188 NP_002179 C/T Q144R minus 24193850 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "by doubleHit,freq,cluster" 5q31 interleukin 13 3276 rs20551 EP300 2033 22 39872508 NM_001429 NP_001420 A/G I997V plus 23214 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.1 123 "by doubleHit,submitter,freq" 22q13.2 E1A binding protein p300 3277 rs20551 EP300 2033 22 39872508 NM_001429 NP_001420 A/G I997V plus 24542191 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.31 123 "by doubleHit,submitter,freq" 22q13.2 E1A binding protein p300 3278 rs20551 EP300 2033 22 39872508 NM_001429 NP_001420 A/G I997V plus 24542191 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "by doubleHit,submitter,freq" 22q13.2 E1A binding protein p300 3279 rs20551 EP300 2033 22 39872508 NM_001429 NP_001420 A/G I997V plus 24542191 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.06 123 "by doubleHit,submitter,freq" 22q13.2 E1A binding protein p300 3280 rs20559 LAMC1 3915 1 179831217 NM_002293 NP_002284 A/G R1121Q plus 23222 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.1 123 by freq 1q31 "laminin, gamma 1 (formerly LAMB2)" 3281 rs20559 LAMC1 3915 1 179831217 NM_002293 NP_002284 A/G R1121Q plus 23222 1303 SEQUENOM CEPH CEPH (92) 92 0.08 123 by freq 1q31 "laminin, gamma 1 (formerly LAMB2)" 3282 rs20559 LAMC1 3915 1 179831217 NM_002293 NP_002284 A/G R1121Q plus 24257529 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 by freq 1q31 "laminin, gamma 1 (formerly LAMB2)" 3283 rs20559 LAMC1 3915 1 179831217 NM_002293 NP_002284 A/G R1121Q plus 24257529 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 by freq 1q31 "laminin, gamma 1 (formerly LAMB2)" 3284 rs20559 LAMC1 3915 1 179831217 NM_002293 NP_002284 A/G R1121Q plus 24257529 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 by freq 1q31 "laminin, gamma 1 (formerly LAMB2)" 3285 rs20571 CA3 761 8 86539249 NM_005181 NP_005172 A/G V31I plus 23235 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 8q13-q22 "carbonic anhydrase III, muscle specific" 3286 rs20571 CA3 761 8 86539249 NM_005181 NP_005172 A/G V31I plus 10425508 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.39 123 "HapMap,doubleHit,submitter,freq,cluster" 8q13-q22 "carbonic anhydrase III, muscle specific" 3287 rs20571 CA3 761 8 86539249 NM_005181 NP_005172 A/G V31I plus 10425508 1303 SEQUENOM CEPH CEPH (92) 92 0.49 123 "HapMap,doubleHit,submitter,freq,cluster" 8q13-q22 "carbonic anhydrase III, muscle specific" 3288 rs20571 CA3 761 8 86539249 NM_005181 NP_005172 A/G V31I plus 24025169 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.4 123 "HapMap,doubleHit,submitter,freq,cluster" 8q13-q22 "carbonic anhydrase III, muscle specific" 3289 rs20571 CA3 761 8 86539249 NM_005181 NP_005172 A/G V31I plus 24025169 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 8q13-q22 "carbonic anhydrase III, muscle specific" 3290 rs20571 CA3 761 8 86539249 NM_005181 NP_005172 A/G V31I plus 24025169 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.42 123 "HapMap,doubleHit,submitter,freq,cluster" 8q13-q22 "carbonic anhydrase III, muscle specific" 3291 rs20577 TNFRSF10A 8797 8 23138422 NM_003844 NP_003835 C/T T33I minus 23242 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 38 0.33 67 by freq 8p21 "tumor necrosis factor receptor superfamily, member 10a" 3292 rs20577 TNFRSF10A 8797 8 23138422 NM_003844 NP_003835 C/T T33I minus 23242 1303 SEQUENOM CEPH CEPH (92) 92 1 67 by freq 8p21 "tumor necrosis factor receptor superfamily, member 10a" 3293 rs25397 FBN1 2200 15 46724180 NM_000138 NP_000129 A/G A27T minus 28113 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 69 HapMap 15q21.1 fibrillin 1 (Marfan syndrome) 3294 rs25397 FBN1 2200 15 46724180 NM_000138 NP_000129 A/G A27T minus 28113 1303 SEQUENOM CEPH CEPH (92) 92 1 69 HapMap 15q21.1 fibrillin 1 (Marfan syndrome) 3295 rs25403 FBN1 2200 15 46692562 NM_000138 NP_000129 C/T R62C minus 28119 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 69 HapMap 15q21.1 fibrillin 1 (Marfan syndrome) 3296 rs25409 GABRB3 2562 15 24569934 NM_021912 NP_068712 C/T P11S minus 28125 524 LDN AUTISM USA (autistic probands) 314 0.02 69 "HapMap,freq" 15q11.2-q12 "gamma-aminobutyric acid (GABA) A receptor, beta 3" 3297 rs25409 GABRB3 2562 15 24569934 NM_021912 NP_068712 C/T P11S minus 28125 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 69 "HapMap,freq" 15q11.2-q12 "gamma-aminobutyric acid (GABA) A receptor, beta 3" 3298 rs25414 ARSB 411 5 78170997 NM_000046 NP_000037 C/T S384N plus 28129 506 NCBI NIHPDR NIHPDR 38 0.05 71 by freq 5p11-q13 arylsulfatase B 3299 rs25414 ARSB 411 5 78170997 NM_198709 NP_942002 C/T S384N plus 28129 506 NCBI NIHPDR NIHPDR 38 0.05 71 by freq 5p11-q13 arylsulfatase B 3300 rs25474 XRCC1 7515 19 48741890 NM_006297 NP_006288 C/T P514L minus 28193 527 OEFNER AUTOSOME Stanford Autosome Collection 1 0.5 94 by freq 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3301 rs25474 XRCC1 7515 19 48741890 NM_006297 NP_006288 C/T P514L minus 28200 527 OEFNER AUTOSOME Stanford Autosome Collection 1 0.5 94 by freq 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3302 rs25474 XRCC1 7515 19 48741890 NM_006297 NP_006288 C/T P514L minus 28200 1303 SEQUENOM CEPH CEPH (92) 92 1 94 by freq 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3303 rs25487 XRCC1 7515 19 48747566 NM_006297 NP_006288 A/G Q399R minus 28206 527 OEFNER AUTOSOME Stanford Autosome Collection 31 0.5 121 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3304 rs25487 XRCC1 7515 19 48747566 NM_006297 NP_006288 A/G Q399R minus 3254965 506 NCBI NIHPDR NIHPDR 844 0.27 121 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3305 rs25487 XRCC1 7515 19 48747566 NM_006297 NP_006288 A/G Q399R minus 4473996 693 EGP_SNPS PDR90 NIHPDR 168 0.23 121 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3306 rs25487 XRCC1 7515 19 48747566 NM_006297 NP_006288 A/G Q399R minus 4473996 1303 SEQUENOM CEPH CEPH (92) 92 0.42 121 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3307 rs25487 XRCC1 7515 19 48747566 NM_006297 NP_006288 A/G Q399R minus 5586970 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.35 121 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3308 rs25487 XRCC1 7515 19 48747566 NM_006297 NP_006288 A/G Q399R minus 5586970 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.47 121 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3309 rs25487 XRCC1 7515 19 48747566 NM_006297 NP_006288 A/G Q399R minus 5586970 776 SNP500CANCER AFR1 African / African-American (24) 48 0.1 121 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3310 rs25487 XRCC1 7515 19 48747566 NM_006297 NP_006288 A/G Q399R minus 5586970 777 SNP500CANCER HISP1 Hispanic (23) 46 0.33 121 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3311 rs25487 XRCC1 7515 19 48747566 NM_006297 NP_006288 A/G Q399R minus 5586970 778 SNP500CANCER PAC1 Pacific Rim (24) 44 0.46 121 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3312 rs25489 XRCC1 7515 19 48748252 NM_006297 NP_006288 A/G R280H minus 28208 527 OEFNER AUTOSOME Stanford Autosome Collection 7 0.5 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3313 rs25489 XRCC1 7515 19 48748252 NM_006297 NP_006288 A/G R280H minus 28208 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3314 rs25489 XRCC1 7515 19 48748252 NM_006297 NP_006288 A/G R280H minus 28208 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3315 rs25489 XRCC1 7515 19 48748252 NM_006297 NP_006288 A/G R280H minus 3176721 619 WICVAR MITOGPOP6 CORIELL Mixed 56 0.07 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3316 rs25489 XRCC1 7515 19 48748252 NM_006297 NP_006288 A/G R280H minus 3254966 506 NCBI NIHPDR NIHPDR 818 0.07 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3317 rs25489 XRCC1 7515 19 48748252 NM_006297 NP_006288 A/G R280H minus 4473987 693 EGP_SNPS PDR90 NIHPDR 174 0.1 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3318 rs25489 XRCC1 7515 19 48748252 NM_006297 NP_006288 A/G R280H minus 4473987 1303 SEQUENOM CEPH CEPH (92) 92 1 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3319 rs25489 XRCC1 7515 19 48748252 NM_006297 NP_006288 A/G R280H minus 5586971 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.05 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3320 rs25489 XRCC1 7515 19 48748252 NM_006297 NP_006288 A/G R280H minus 5586971 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.03 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3321 rs25489 XRCC1 7515 19 48748252 NM_006297 NP_006288 A/G R280H minus 5586971 776 SNP500CANCER AFR1 African / African-American (24) 48 0.06 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3322 rs25489 XRCC1 7515 19 48748252 NM_006297 NP_006288 A/G R280H minus 5586971 777 SNP500CANCER HISP1 Hispanic (23) 46 0.04 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3323 rs25489 XRCC1 7515 19 48748252 NM_006297 NP_006288 A/G R280H minus 5586971 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.09 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3324 rs25490 XRCC1 7515 19 48748181 NM_006297 NP_006288 A/G T304A minus 28209 527 OEFNER AUTOSOME Stanford Autosome Collection 3 0.5 113 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3325 rs25490 XRCC1 7515 19 48748181 NM_006297 NP_006288 A/G T304A minus 4473989 693 EGP_SNPS PDR90 NIHPDR 172 0.01 113 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3326 rs25490 XRCC1 7515 19 48748181 NM_006297 NP_006288 A/G T304A minus 4473989 1303 SEQUENOM CEPH CEPH (92) 92 1 113 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3327 rs25490 XRCC1 7515 19 48748181 NM_006297 NP_006288 A/G T304A minus 5586980 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.01 113 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3328 rs25490 XRCC1 7515 19 48748181 NM_006297 NP_006288 A/G T304A minus 5586980 775 SNP500CANCER CAUC1 Caucasian (31) 62 1 113 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3329 rs25490 XRCC1 7515 19 48748181 NM_006297 NP_006288 A/G T304A minus 5586980 776 SNP500CANCER AFR1 African / African-American (24) 48 0.02 113 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3330 rs25490 XRCC1 7515 19 48748181 NM_006297 NP_006288 A/G T304A minus 5586980 777 SNP500CANCER HISP1 Hispanic (23) 46 0.02 113 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3331 rs25490 XRCC1 7515 19 48748181 NM_006297 NP_006288 A/G T304A minus 5586980 778 SNP500CANCER PAC1 Pacific Rim (24) 46 1 113 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3332 rs25491 XRCC1 7515 19 48748166 NM_006297 NP_006288 C/T P309S minus 28210 527 OEFNER AUTOSOME Stanford Autosome Collection 2 0.5 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3333 rs25491 XRCC1 7515 19 48748166 NM_006297 NP_006288 C/T P309S minus 3254956 506 NCBI NIHPDR NIHPDR 830 0 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3334 rs25491 XRCC1 7515 19 48748166 NM_006297 NP_006288 C/T P309S minus 4473990 693 EGP_SNPS PDR90 NIHPDR 176 0.01 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3335 rs25491 XRCC1 7515 19 48748166 NM_006297 NP_006288 C/T P309S minus 4473990 1303 SEQUENOM CEPH CEPH (92) 92 1 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3336 rs25491 XRCC1 7515 19 48748166 NM_006297 NP_006288 C/T P309S minus 5586981 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 1 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3337 rs25491 XRCC1 7515 19 48748166 NM_006297 NP_006288 C/T P309S minus 5586981 775 SNP500CANCER CAUC1 Caucasian (31) 62 1 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3338 rs25491 XRCC1 7515 19 48748166 NM_006297 NP_006288 C/T P309S minus 5586981 776 SNP500CANCER AFR1 African / African-American (24) 48 1 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3339 rs25491 XRCC1 7515 19 48748166 NM_006297 NP_006288 C/T P309S minus 5586981 777 SNP500CANCER HISP1 Hispanic (23) 46 1 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3340 rs25491 XRCC1 7515 19 48748166 NM_006297 NP_006288 C/T P309S minus 5586981 778 SNP500CANCER PAC1 Pacific Rim (24) 46 1 116 "by cluster,freq" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3341 rs25495 XRCC1 7515 19 48757006 NM_006297 NP_006288 A/T K51X minus 28214 527 OEFNER AUTOSOME Stanford Autosome Collection 2 0.5 71 by freq 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3342 rs25495 XRCC1 7515 19 48757006 NM_006297 NP_006288 A/T K51X minus 28214 1303 SEQUENOM CEPH CEPH (92) 92 1 71 by freq 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3343 rs25496 XRCC1 7515 19 48756942 NM_006297 NP_006288 C/T V72A minus 28215 527 OEFNER AUTOSOME Stanford Autosome Collection 2 0.5 116 "HapMap,freq,cluster" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3344 rs25496 XRCC1 7515 19 48756942 NM_006297 NP_006288 C/T V72A minus 3254957 506 NCBI NIHPDR NIHPDR 866 0.02 116 "HapMap,freq,cluster" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3345 rs25496 XRCC1 7515 19 48756942 NM_006297 NP_006288 C/T V72A minus 4473929 693 EGP_SNPS PDR90 NIHPDR 174 0.03 116 "HapMap,freq,cluster" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3346 rs25496 XRCC1 7515 19 48756942 NM_006297 NP_006288 C/T V72A minus 4473929 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 116 "HapMap,freq,cluster" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3347 rs25496 XRCC1 7515 19 48756942 NM_006297 NP_006288 C/T V72A minus 4473929 1303 SEQUENOM CEPH CEPH (92) 92 1 116 "HapMap,freq,cluster" 19q13.2 X-ray repair complementing defective repair in Chinese hamster cells 1 3348 rs25640 HSD17B4 3295 5 118839432 NM_000414 NP_000405 A/G R106H plus 28362 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 36 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 5q21 hydroxysteroid (17-beta) dehydrogenase 4 3349 rs25640 HSD17B4 3295 5 118839432 NM_000414 NP_000405 A/G R106H plus 28362 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 50 0.36 123 "HapMap,doubleHit,submitter,freq,cluster" 5q21 hydroxysteroid (17-beta) dehydrogenase 4 3350 rs25640 HSD17B4 3295 5 118839432 NM_000414 NP_000405 A/G R106H plus 3228622 738 YUSUKE JBIC-ALLELE Japanese (752) 1478 0.41 123 "HapMap,doubleHit,submitter,freq,cluster" 5q21 hydroxysteroid (17-beta) dehydrogenase 4 3351 rs25640 HSD17B4 3295 5 118839432 NM_000414 NP_000405 A/G R106H plus 3447822 885 TSC-CSHL HapMap-CEPH-30-trios 116 0.47 123 "HapMap,doubleHit,submitter,freq,cluster" 5q21 hydroxysteroid (17-beta) dehydrogenase 4 3352 rs25640 HSD17B4 3295 5 118839432 NM_000414 NP_000405 A/G R106H plus 24346051 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.48 123 "HapMap,doubleHit,submitter,freq,cluster" 5q21 hydroxysteroid (17-beta) dehydrogenase 4 3353 rs25640 HSD17B4 3295 5 118839432 NM_000414 NP_000405 A/G R106H plus 24346051 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.22 123 "HapMap,doubleHit,submitter,freq,cluster" 5q21 hydroxysteroid (17-beta) dehydrogenase 4 3354 rs25640 HSD17B4 3295 5 118839432 NM_000414 NP_000405 A/G R106H plus 24346051 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 5q21 hydroxysteroid (17-beta) dehydrogenase 4 3355 rs25644 P2RX4 5025 12 120129366 NM_002560 NP_002551 A/G S242G plus 28367 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 60 0.1 123 "by cluster,freq" 12q24.32 "purinergic receptor P2X, ligand-gated ion channel, 4" 3356 rs25644 P2RX4 5025 12 120129366 NM_002560 NP_002551 A/G S242G plus 3178007 619 WICVAR MITOGPOP6 CORIELL Mixed 60 0.12 123 "by cluster,freq" 12q24.32 "purinergic receptor P2X, ligand-gated ion channel, 4" 3357 rs25644 P2RX4 5025 12 120129366 NM_002560 NP_002551 A/G S242G plus 3250769 738 YUSUKE JBIC-ALLELE Japanese (752) 1502 0.19 123 "by cluster,freq" 12q24.32 "purinergic receptor P2X, ligand-gated ion channel, 4" 3358 rs25644 P2RX4 5025 12 120129366 NM_002560 NP_002551 A/G S242G plus 23933567 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "by cluster,freq" 12q24.32 "purinergic receptor P2X, ligand-gated ion channel, 4" 3359 rs25644 P2RX4 5025 12 120129366 NM_002560 NP_002551 A/G S242G plus 23933567 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.2 123 "by cluster,freq" 12q24.32 "purinergic receptor P2X, ligand-gated ion channel, 4" 3360 rs25644 P2RX4 5025 12 120129366 NM_002560 NP_002551 A/G S242G plus 23933567 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.38 123 "by cluster,freq" 12q24.32 "purinergic receptor P2X, ligand-gated ion channel, 4" 3361 rs25644 P2RX4 5025 12 120129366 NM_002560 NP_002551 A/G S242G plus 24811130 1303 SEQUENOM CEPH CEPH (92) 184 0.08 123 "by cluster,freq" 12q24.32 "purinergic receptor P2X, ligand-gated ion channel, 4" 3362 rs25653 ANPEP 290 15 88150562 NM_001150 NP_001141 A/G R86Q minus 28376 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 38 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 15q25-q26 "alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150)" 3363 rs25653 ANPEP 290 15 88150562 NM_001150 NP_001141 A/G R86Q minus 28376 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 32 0.47 123 "HapMap,doubleHit,submitter,freq,cluster" 15q25-q26 "alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150)" 3364 rs25653 ANPEP 290 15 88150562 NM_001150 NP_001141 A/G R86Q minus 3198237 738 YUSUKE JBIC-ALLELE Japanese (752) 1472 0.43 123 "HapMap,doubleHit,submitter,freq,cluster" 15q25-q26 "alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150)" 3365 rs25653 ANPEP 290 15 88150562 NM_001150 NP_001141 A/G R86Q minus 12586497 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.43 123 "HapMap,doubleHit,submitter,freq,cluster" 15q25-q26 "alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150)" 3366 rs25653 ANPEP 290 15 88150562 NM_001150 NP_001141 A/G R86Q minus 12586497 1303 SEQUENOM CEPH CEPH (92) 92 0.44 123 "HapMap,doubleHit,submitter,freq,cluster" 15q25-q26 "alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150)" 3367 rs25653 ANPEP 290 15 88150562 NM_001150 NP_001141 A/G R86Q minus 24057941 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.41 123 "HapMap,doubleHit,submitter,freq,cluster" 15q25-q26 "alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150)" 3368 rs25653 ANPEP 290 15 88150562 NM_001150 NP_001141 A/G R86Q minus 24057941 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "HapMap,doubleHit,submitter,freq,cluster" 15q25-q26 "alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150)" 3369 rs25653 ANPEP 290 15 88150562 NM_001150 NP_001141 A/G R86Q minus 24057941 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 15q25-q26 "alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150)" 3370 rs25655 CAPN2 824 1 220207143 NM_001748 NP_001739 C/G D22E plus 28378 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.1 123 by freq 1q41-q42 "calpain 2, (m/II) large subunit" 3371 rs25655 CAPN2 824 1 220207143 NM_001748 NP_001739 C/G D22E plus 28378 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 60 0.03 123 by freq 1q41-q42 "calpain 2, (m/II) large subunit" 3372 rs25655 CAPN2 824 1 220207143 NM_001748 NP_001739 C/G D22E plus 28378 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 1q41-q42 "calpain 2, (m/II) large subunit" 3373 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 28404 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 38 0.33 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3374 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 28404 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 54 0.07 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3375 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 131069 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.12 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3376 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 131069 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.29 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3377 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 131069 640 TSC-CSHL TSC_42_A TSC Asian (42) 82 1 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3378 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 131069 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.18 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3379 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 131069 901 AFFY AfAm 12 0.17 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3380 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 131069 902 AFFY Caucasian 18 0.22 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3381 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 131069 903 AFFY Asian 12 1 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3382 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 131069 904 AFFY CEPH 12 0.08 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3383 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 131069 905 AFFY PDpanel 46 0.13 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3384 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 131069 1303 SEQUENOM CEPH CEPH (92) 92 0.42 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3385 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 16340789 693 EGP_SNPS PDR90 NIHPDR 180 0.14 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3386 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 24697307 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.25 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3387 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 24697307 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3388 rs25680 TNFRSF7 939 12 6424889 NM_001242 NP_001233 A/G A59T plus 24697307 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.08 123 "HapMap,freq" 12p13 "tumor necrosis factor receptor superfamily, member 7" 3389 rs25683 ACAT2 39 6 160166754 NM_005891 NP_005882 A/G K211R plus 28408 523 WIAF-CSNP WIAF-CSNP-MITOGPOP4 "Europeans (20), Asians (10) and African-Americans (10)" 40 0.33 102 "by cluster,freq" 6q25.3-q26 acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase) 3390 rs25683 ACAT2 39 6 160166754 NM_005891 NP_005882 A/G K211R plus 28408 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 48 0.19 102 "by cluster,freq" 6q25.3-q26 acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase) 3391 rs25683 ACAT2 39 6 160166754 NM_005891 NP_005882 A/G K211R plus 3209428 738 YUSUKE JBIC-ALLELE Japanese (752) 1468 0.18 102 "by cluster,freq" 6q25.3-q26 acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase) 3392 rs25688 TMEM2 23670 9 71589788 NM_013390 NP_037522 A/G R245K minus 28413 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.11 72 "HapMap,submitter,freq" 9q13-q21 transmembrane protein 2 3393 rs25688 TMEM2 23670 9 71589788 NM_013390 NP_037522 A/G R245K minus 28413 1303 SEQUENOM CEPH CEPH (92) 92 0.07 72 "HapMap,submitter,freq" 9q13-q21 transmembrane protein 2 3394 rs25689 TMEM2 23670 9 71589650 NM_013390 NP_037522 A/G R291H minus 4925785 738 YUSUKE JBIC-ALLELE Japanese (752) 1496 0.19 121 "HapMap,doubleHit,submitter,freq,cluster" 9q13-q21 transmembrane protein 2 3395 rs25689 TMEM2 23670 9 71589650 NM_013390 NP_037522 A/G R291H minus 8823705 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.28 121 "HapMap,doubleHit,submitter,freq,cluster" 9q13-q21 transmembrane protein 2 3396 rs25689 TMEM2 23670 9 71589650 NM_013390 NP_037522 A/G R291H minus 8823705 1303 SEQUENOM CEPH CEPH (92) 92 0.4 121 "HapMap,doubleHit,submitter,freq,cluster" 9q13-q21 transmembrane protein 2 3397 rs25692 TMEM2 23670 9 71562524 NM_013390 NP_037522 C/T P765S minus 3254721 738 YUSUKE JBIC-ALLELE Japanese (752) 1474 0.13 123 "HapMap,freq,cluster" 9q13-q21 transmembrane protein 2 3398 rs25692 TMEM2 23670 9 71562524 NM_013390 NP_037522 C/T P765S minus 3254721 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.17 123 "HapMap,freq,cluster" 9q13-q21 transmembrane protein 2 3399 rs25692 TMEM2 23670 9 71562524 NM_013390 NP_037522 C/T P765S minus 15550967 1303 SEQUENOM CEPH CEPH (92) 92 0.39 123 "HapMap,freq,cluster" 9q13-q21 transmembrane protein 2 3400 rs25692 TMEM2 23670 9 71562524 NM_013390 NP_037522 C/T P765S minus 24560257 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.11 123 "HapMap,freq,cluster" 9q13-q21 transmembrane protein 2 3401 rs25692 TMEM2 23670 9 71562524 NM_013390 NP_037522 C/T P765S minus 24560257 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 1 123 "HapMap,freq,cluster" 9q13-q21 transmembrane protein 2 3402 rs25692 TMEM2 23670 9 71562524 NM_013390 NP_037522 C/T P765S minus 24560257 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 40 0.03 123 "HapMap,freq,cluster" 9q13-q21 transmembrane protein 2 3403 rs25695 TMEM2 23670 9 71579400 NM_013390 NP_037522 A/T D423E minus 3210557 738 YUSUKE JBIC-ALLELE Japanese (752) 1496 0.07 123 "HapMap,submitter,freq,cluster" 9q13-q21 transmembrane protein 2 3404 rs25695 TMEM2 23670 9 71579400 NM_013390 NP_037522 A/T D423E minus 3210557 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.11 123 "HapMap,submitter,freq,cluster" 9q13-q21 transmembrane protein 2 3405 rs25695 TMEM2 23670 9 71579400 NM_013390 NP_037522 A/T D423E minus 3210557 1303 SEQUENOM CEPH CEPH (92) 92 0.11 123 "HapMap,submitter,freq,cluster" 9q13-q21 transmembrane protein 2 3406 rs25695 TMEM2 23670 9 71579400 NM_013390 NP_037522 A/T D423E minus 24560361 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.1 123 "HapMap,submitter,freq,cluster" 9q13-q21 transmembrane protein 2 3407 rs25695 TMEM2 23670 9 71579400 NM_013390 NP_037522 A/T D423E minus 24560361 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "HapMap,submitter,freq,cluster" 9q13-q21 transmembrane protein 2 3408 rs25695 TMEM2 23670 9 71579400 NM_013390 NP_037522 A/T D423E minus 24560361 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,submitter,freq,cluster" 9q13-q21 transmembrane protein 2 3409 rs25882 CSF2 1437 5 131439359 NM_000758 NP_000749 C/T I117T plus 2981718 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.33 123 "by submitter,freq,cluster" 5q31.1 colony stimulating factor 2 (granulocyte-macrophage) 3410 rs25882 CSF2 1437 5 131439359 NM_000758 NP_000749 C/T I117T plus 2981718 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.2 123 "by submitter,freq,cluster" 5q31.1 colony stimulating factor 2 (granulocyte-macrophage) 3411 rs25882 CSF2 1437 5 131439359 NM_000758 NP_000749 C/T I117T plus 3176020 619 WICVAR MITOGPOP6 CORIELL Mixed 48 0.29 123 "by submitter,freq,cluster" 5q31.1 colony stimulating factor 2 (granulocyte-macrophage) 3412 rs25882 CSF2 1437 5 131439359 NM_000758 NP_000749 C/T I117T plus 6903720 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.34 123 "by submitter,freq,cluster" 5q31.1 colony stimulating factor 2 (granulocyte-macrophage) 3413 rs25882 CSF2 1437 5 131439359 NM_000758 NP_000749 C/T I117T plus 6903720 775 SNP500CANCER CAUC1 Caucasian (31) 62 0.24 123 "by submitter,freq,cluster" 5q31.1 colony stimulating factor 2 (granulocyte-macrophage) 3414 rs25882 CSF2 1437 5 131439359 NM_000758 NP_000749 C/T I117T plus 6903720 776 SNP500CANCER AFR1 African / African-American (24) 48 0.25 123 "by submitter,freq,cluster" 5q31.1 colony stimulating factor 2 (granulocyte-macrophage) 3415 rs25882 CSF2 1437 5 131439359 NM_000758 NP_000749 C/T I117T plus 6903720 777 SNP500CANCER HISP1 Hispanic (23) 46 0.33 123 "by submitter,freq,cluster" 5q31.1 colony stimulating factor 2 (granulocyte-macrophage) 3416 rs25882 CSF2 1437 5 131439359 NM_000758 NP_000749 C/T I117T plus 6903720 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.44 123 "by submitter,freq,cluster" 5q31.1 colony stimulating factor 2 (granulocyte-macrophage) 3417 rs25882 CSF2 1437 5 131439359 NM_000758 NP_000749 C/T I117T plus 23737224 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "by submitter,freq,cluster" 5q31.1 colony stimulating factor 2 (granulocyte-macrophage) 3418 rs25882 CSF2 1437 5 131439359 NM_000758 NP_000749 C/T I117T plus 23737224 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.32 123 "by submitter,freq,cluster" 5q31.1 colony stimulating factor 2 (granulocyte-macrophage) 3419 rs25882 CSF2 1437 5 131439359 NM_000758 NP_000749 C/T I117T plus 23737224 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "by submitter,freq,cluster" 5q31.1 colony stimulating factor 2 (granulocyte-macrophage) 3420 rs25901 MYO10 4651 5 16726975 NM_012334 NP_036466 C/G S1663T plus 5312292 1303 SEQUENOM CEPH CEPH (92) 92 0.44 123 "by doubleHit,submitter,freq,cluster" 5p15.1-p14.3 myosin X 3421 rs25901 MYO10 4651 5 16726975 NM_012334 NP_036466 C/G S1663T plus 24652419 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.3 123 "by doubleHit,submitter,freq,cluster" 5p15.1-p14.3 myosin X 3422 rs25901 MYO10 4651 5 16726975 NM_012334 NP_036466 C/G S1663T plus 24652419 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.07 123 "by doubleHit,submitter,freq,cluster" 5p15.1-p14.3 myosin X 3423 rs25901 MYO10 4651 5 16726975 NM_012334 NP_036466 C/G S1663T plus 24652419 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.28 123 "by doubleHit,submitter,freq,cluster" 5p15.1-p14.3 myosin X 3424 rs26618 ARTS-1 51752 5 96156592 NM_016442 NP_057526 C/T I276M plus 639522 1303 SEQUENOM CEPH CEPH (92) 92 0.19 123 "by doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3425 rs26618 ARTS-1 51752 5 96156592 NM_016442 NP_057526 C/T I276M plus 3249717 738 YUSUKE JBIC-ALLELE Japanese (752) 1498 0.26 123 "by doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3426 rs26618 ARTS-1 51752 5 96156592 NM_016442 NP_057526 C/T I276M plus 24005225 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.21 123 "by doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3427 rs26618 ARTS-1 51752 5 96156592 NM_016442 NP_057526 C/T I276M plus 24005225 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.16 123 "by doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3428 rs26618 ARTS-1 51752 5 96156592 NM_016442 NP_057526 C/T I276M plus 24005225 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.26 123 "by doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3429 rs26653 ARTS-1 51752 5 96165006 NM_016442 NP_057526 C/G R127P plus 37766 3 KWOK C USA Caucasian (30) 60 0.2 121 "HapMap,doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3430 rs26653 ARTS-1 51752 5 96165006 NM_016442 NP_057526 C/G R127P plus 37766 5 KWOK B USA African-American (30) 60 0.3 121 "HapMap,doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3431 rs26653 ARTS-1 51752 5 96165006 NM_016442 NP_057526 C/G R127P plus 37766 7 KWOK A Chinese (30) 30 0.5 121 "HapMap,doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3432 rs26653 ARTS-1 51752 5 96165006 NM_016442 NP_057526 C/G R127P plus 639869 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.28 121 "HapMap,doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3433 rs26653 ARTS-1 51752 5 96165006 NM_016442 NP_057526 C/G R127P plus 639869 1303 SEQUENOM CEPH CEPH (92) 92 0.27 121 "HapMap,doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3434 rs26653 ARTS-1 51752 5 96165006 NM_016442 NP_057526 C/G R127P plus 4920013 738 YUSUKE JBIC-ALLELE Japanese (752) 1484 0.47 121 "HapMap,doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3435 rs26722 MATP 51151 5 33999627 NM_016180 NP_057264 C/T E272K plus 38844 771 TSC-CSHL SC_12_A CORIELL Asian (12) 22 0.36 123 "HapMap,doubleHit,submitter,freq,cluster" 5p13.3 membrane associated transporter 3436 rs26722 MATP 51151 5 33999627 NM_016180 NP_057264 C/T E272K plus 38844 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 22 0.09 123 "HapMap,doubleHit,submitter,freq,cluster" 5p13.3 membrane associated transporter 3437 rs26722 MATP 51151 5 33999627 NM_016180 NP_057264 C/T E272K plus 38844 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 1 123 "HapMap,doubleHit,submitter,freq,cluster" 5p13.3 membrane associated transporter 3438 rs26722 MATP 51151 5 33999627 NM_016180 NP_057264 C/T E272K plus 1581079 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 123 "HapMap,doubleHit,submitter,freq,cluster" 5p13.3 membrane associated transporter 3439 rs26722 MATP 51151 5 33999627 NM_016180 NP_057264 C/T E272K plus 3249660 738 YUSUKE JBIC-ALLELE Japanese (752) 1498 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 5p13.3 membrane associated transporter 3440 rs26722 MATP 51151 5 33999627 NM_016180 NP_057264 C/T E272K plus 24016101 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "HapMap,doubleHit,submitter,freq,cluster" 5p13.3 membrane associated transporter 3441 rs26722 MATP 51151 5 33999627 NM_016180 NP_057264 C/T E272K plus 24016101 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "HapMap,doubleHit,submitter,freq,cluster" 5p13.3 membrane associated transporter 3442 rs26722 MATP 51151 5 33999627 NM_016180 NP_057264 C/T E272K plus 24016101 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 5p13.3 membrane associated transporter 3443 rs26740 MYO10 4651 5 16764087 NM_012334 NP_036466 C/T R700Q plus 23718135 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by submitter,freq,cluster" 5p15.1-p14.3 myosin X 3444 rs26740 MYO10 4651 5 16764087 NM_012334 NP_036466 C/T R700Q plus 23718135 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.24 123 "by submitter,freq,cluster" 5p15.1-p14.3 myosin X 3445 rs26740 MYO10 4651 5 16764087 NM_012334 NP_036466 C/T R700Q plus 23718135 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by submitter,freq,cluster" 5p15.1-p14.3 myosin X 3446 rs27044 ARTS-1 51752 5 96144608 NM_016442 NP_057526 C/G Q730E plus 40819 3 KWOK C USA Caucasian (30) 60 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3447 rs27044 ARTS-1 51752 5 96144608 NM_016442 NP_057526 C/G Q730E plus 40819 5 KWOK B USA African-American (30) 60 0.2 123 "HapMap,doubleHit,submitter,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3448 rs27044 ARTS-1 51752 5 96144608 NM_016442 NP_057526 C/G Q730E plus 40819 7 KWOK A Chinese (30) 30 0.5 123 "HapMap,doubleHit,submitter,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3449 rs27044 ARTS-1 51752 5 96144608 NM_016442 NP_057526 C/G Q730E plus 639666 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.25 123 "HapMap,doubleHit,submitter,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3450 rs27044 ARTS-1 51752 5 96144608 NM_016442 NP_057526 C/G Q730E plus 639666 1303 SEQUENOM CEPH CEPH (92) 92 0.14 123 "HapMap,doubleHit,submitter,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3451 rs27044 ARTS-1 51752 5 96144608 NM_016442 NP_057526 C/G Q730E plus 3228975 738 YUSUKE JBIC-ALLELE Japanese (752) 1456 0.39 123 "HapMap,doubleHit,submitter,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3452 rs27044 ARTS-1 51752 5 96144608 NM_016442 NP_057526 C/G Q730E plus 24005051 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.29 123 "HapMap,doubleHit,submitter,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3453 rs27044 ARTS-1 51752 5 96144608 NM_016442 NP_057526 C/G Q730E plus 24005051 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.34 123 "HapMap,doubleHit,submitter,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3454 rs27044 ARTS-1 51752 5 96144608 NM_016442 NP_057526 C/G Q730E plus 24005051 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.44 123 "HapMap,doubleHit,submitter,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3455 rs27230 ZNF434 54925 16 3374700 NM_017810 NP_060280 A/G Y120H plus 24479903 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "by submitter,freq" 16p13.3 zinc finger protein 434 3456 rs27230 ZNF434 54925 16 3374700 NM_017810 NP_060280 A/G Y120H plus 24479903 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by submitter,freq" 16p13.3 zinc finger protein 434 3457 rs27230 ZNF434 54925 16 3374700 NM_017810 NP_060280 A/G Y120H plus 24479903 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by submitter,freq" 16p13.3 zinc finger protein 434 3458 rs27742 SULT1A2 6799 16 28510894 NM_001054 NP_001045 A/G K282E minus 2745939 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "by cluster,freq" 16p12.1 "sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2" 3459 rs27742 SULT1A2 6799 16 28510894 NM_001054 NP_001045 A/G K282E minus 16341388 1166 PHARMGKB_PPII PA128747821 240 0.02 121 "by cluster,freq" 16p12.1 "sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2" 3460 rs27742 SULT1A2 6799 16 28510894 NM_177528 NP_803564 A/G K282E minus 2745939 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "by cluster,freq" 16p12.1 "sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2" 3461 rs27742 SULT1A2 6799 16 28510894 NM_177528 NP_803564 A/G K282E minus 16341388 1166 PHARMGKB_PPII PA128747821 240 0.02 121 "by cluster,freq" 16p12.1 "sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2" 3462 rs27895 ARTS-1 51752 5 96155299 NM_016442 NP_057526 C/T G346D plus 2229359 1303 SEQUENOM CEPH CEPH (92) 92 0.09 123 "by doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3463 rs27895 ARTS-1 51752 5 96155299 NM_016442 NP_057526 C/T G346D plus 23439230 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.06 123 "by doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3464 rs27895 ARTS-1 51752 5 96155299 NM_016442 NP_057526 C/T G346D plus 23439230 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "by doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3465 rs27895 ARTS-1 51752 5 96155299 NM_016442 NP_057526 C/T G346D plus 23439230 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3466 rs28265 ASC1p100 84164 22 28525315 NM_032204 NP_115580 C/G D407H minus 88210 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.04 123 "HapMap,doubleHit,freq,cluster" 22q12.1 ASC-1 complex subunit P100 3467 rs28265 ASC1p100 84164 22 28525315 NM_032204 NP_115580 C/G D407H minus 88210 1303 SEQUENOM CEPH CEPH (92) 92 0.06 123 "HapMap,doubleHit,freq,cluster" 22q12.1 ASC-1 complex subunit P100 3468 rs28265 ASC1p100 84164 22 28525315 NM_032204 NP_115580 C/G D407H minus 23625975 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.08 123 "HapMap,doubleHit,freq,cluster" 22q12.1 ASC-1 complex subunit P100 3469 rs28265 ASC1p100 84164 22 28525315 NM_032204 NP_115580 C/G D407H minus 23625975 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.11 123 "HapMap,doubleHit,freq,cluster" 22q12.1 ASC-1 complex subunit P100 3470 rs28265 ASC1p100 84164 22 28525315 NM_032204 NP_115580 C/G D407H minus 23625975 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 1 123 "HapMap,doubleHit,freq,cluster" 22q12.1 ASC-1 complex subunit P100 3471 rs28963 SPACA3 124912 17 28346804 NM_173847 NP_776246 C/T H100R minus 28490 1303 SEQUENOM CEPH CEPH (92) 92 1 102 "by submitter,cluster" 17q12 sperm acrosome associated 3 3472 rs29372 ANK2 287 4 114561613 NM_001148 NP_001139 C/T N687S minus 28973 1303 SEQUENOM CEPH CEPH (92) 92 0.06 102 "by cluster,freq" 4q25-q27 "ankyrin 2, neuronal" 3473 rs29372 ANK2 287 4 114561613 NM_020977 NP_066187 C/T N687S minus 28973 1303 SEQUENOM CEPH CEPH (92) 92 0.06 102 "by cluster,freq" 4q25-q27 "ankyrin 2, neuronal" 3474 rs30168 DNAH5 1767 5 13772089 NM_001369 NP_001360 A/G A4134V plus 1481473 638 TSC-CSHL TSC_42_AA TSC African American (42) 74 0.47 123 "HapMap,doubleHit,submitter,freq,cluster" 5p15.2 "dynein, axonemal, heavy polypeptide 5" 3475 rs30168 DNAH5 1767 5 13772089 NM_001369 NP_001360 A/G A4134V plus 1481473 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 68 0.43 123 "HapMap,doubleHit,submitter,freq,cluster" 5p15.2 "dynein, axonemal, heavy polypeptide 5" 3476 rs30168 DNAH5 1767 5 13772089 NM_001369 NP_001360 A/G A4134V plus 1481473 640 TSC-CSHL TSC_42_A TSC Asian (42) 50 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 5p15.2 "dynein, axonemal, heavy polypeptide 5" 3477 rs30168 DNAH5 1767 5 13772089 NM_001369 NP_001360 A/G A4134V plus 1481473 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 5p15.2 "dynein, axonemal, heavy polypeptide 5" 3478 rs30168 DNAH5 1767 5 13772089 NM_001369 NP_001360 A/G A4134V plus 1481473 1303 SEQUENOM CEPH CEPH (92) 92 0.44 123 "HapMap,doubleHit,submitter,freq,cluster" 5p15.2 "dynein, axonemal, heavy polypeptide 5" 3479 rs30168 DNAH5 1767 5 13772089 NM_001369 NP_001360 A/G A4134V plus 24418807 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 5p15.2 "dynein, axonemal, heavy polypeptide 5" 3480 rs30168 DNAH5 1767 5 13772089 NM_001369 NP_001360 A/G A4134V plus 24418807 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.43 123 "HapMap,doubleHit,submitter,freq,cluster" 5p15.2 "dynein, axonemal, heavy polypeptide 5" 3481 rs30168 DNAH5 1767 5 13772089 NM_001369 NP_001360 A/G A4134V plus 24418807 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 5p15.2 "dynein, axonemal, heavy polypeptide 5" 3482 rs30168 DNAH5 1767 5 13772089 NM_001369 NP_001360 A/G A4134V plus 24804807 1303 SEQUENOM CEPH CEPH (92) 184 0.23 123 "HapMap,doubleHit,submitter,freq,cluster" 5p15.2 "dynein, axonemal, heavy polypeptide 5" 3483 rs30187 ARTS-1 51752 5 96150086 NM_016442 NP_057526 C/T K528R plus 640128 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.3 123 "HapMap,doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3484 rs30187 ARTS-1 51752 5 96150086 NM_016442 NP_057526 C/T K528R plus 640128 1303 SEQUENOM CEPH CEPH (92) 92 0.15 123 "HapMap,doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3485 rs30187 ARTS-1 51752 5 96150086 NM_016442 NP_057526 C/T K528R plus 3215067 738 YUSUKE JBIC-ALLELE Japanese (752) 1488 0.45 123 "HapMap,doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3486 rs30187 ARTS-1 51752 5 96150086 NM_016442 NP_057526 C/T K528R plus 23439137 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.33 123 "HapMap,doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3487 rs30187 ARTS-1 51752 5 96150086 NM_016442 NP_057526 C/T K528R plus 23439137 1372 PERLEGEN AFD_AFR_PANEL African American (24) 23 0.5 123 "HapMap,doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3488 rs30187 ARTS-1 51752 5 96150086 NM_016442 NP_057526 C/T K528R plus 23439137 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.44 123 "HapMap,doubleHit,freq,cluster" 5q15 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator 3489 rs30461 IL29 282618 19 44480955 NM_172140 NP_742152 C/T N188D minus 689370 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.12 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.13 "interleukin 29 (interferon, lambda 1)" 3490 rs30461 IL29 282618 19 44480955 NM_172140 NP_742152 C/T N188D minus 23763490 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.13 "interleukin 29 (interferon, lambda 1)" 3491 rs30461 IL29 282618 19 44480955 NM_172140 NP_742152 C/T N188D minus 23763490 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.13 "interleukin 29 (interferon, lambda 1)" 3492 rs30461 IL29 282618 19 44480955 NM_172140 NP_742152 C/T N188D minus 23763490 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.04 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.13 "interleukin 29 (interferon, lambda 1)" 3493 rs30489 TCF7 6932 5 133509366 NM_201633 NP_963964 C/T G256R minus 3576863 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.05 123 "HapMap,submitter,freq,cluster" 5q31.1 "transcription factor 7 (T-cell specific, HMG-box)" 3494 rs30489 TCF7 6932 5 133509366 NM_201633 NP_963964 C/T G256R minus 3576863 1303 SEQUENOM CEPH CEPH (92) 92 0.01 123 "HapMap,submitter,freq,cluster" 5q31.1 "transcription factor 7 (T-cell specific, HMG-box)" 3495 rs30489 TCF7 6932 5 133509366 NM_201633 NP_963964 C/T G256R minus 23953339 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.06 123 "HapMap,submitter,freq,cluster" 5q31.1 "transcription factor 7 (T-cell specific, HMG-box)" 3496 rs30489 TCF7 6932 5 133509366 NM_201633 NP_963964 C/T G256R minus 23953339 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "HapMap,submitter,freq,cluster" 5q31.1 "transcription factor 7 (T-cell specific, HMG-box)" 3497 rs30489 TCF7 6932 5 133509366 NM_201633 NP_963964 C/T G256R minus 23953339 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.31 123 "HapMap,submitter,freq,cluster" 5q31.1 "transcription factor 7 (T-cell specific, HMG-box)" 3498 rs30832 SLC26A2 1836 5 149341070 NM_000112 NP_000103 A/G I574T minus 1882112 1303 SEQUENOM CEPH CEPH (92) 92 0.11 121 "by submitter,freq" 5q31-q34 "solute carrier family 26 (sulfate transporter), member 2" 3499 rs30842 GOT2 2806 16 57300955 NM_002080 NP_002071 G/T V346G minus 10819561 1303 SEQUENOM CEPH CEPH (92) 92 0.49 123 "by cluster,freq" 16q21 "glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)" 3500 rs30842 GOT2 2806 16 57300955 NM_002080 NP_002071 G/T V346G minus 24614222 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.38 123 "by cluster,freq" 16q21 "glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)" 3501 rs30842 GOT2 2806 16 57300955 NM_002080 NP_002071 G/T V346G minus 24614222 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "by cluster,freq" 16q21 "glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)" 3502 rs30842 GOT2 2806 16 57300955 NM_002080 NP_002071 G/T V346G minus 24614222 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.29 123 "by cluster,freq" 16q21 "glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)" 3503 rs31244 SV2C 22987 5 75630499 XM_043493 XP_043493 A/G D543N plus 516161 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.06 116 "HapMap,doubleHit,freq,cluster" 5q13.3 synaptic vesicle glycoprotein 2C 3504 rs31244 SV2C 22987 5 75630499 XM_043493 XP_043493 A/G D543N plus 516161 1303 SEQUENOM CEPH CEPH (92) 92 0.08 116 "HapMap,doubleHit,freq,cluster" 5q13.3 synaptic vesicle glycoprotein 2C 3505 rs31244 SV2C 22987 5 75630499 XM_043493 XP_043493 A/G D543N plus 3205530 738 YUSUKE JBIC-ALLELE Japanese (752) 1498 0.1 116 "HapMap,doubleHit,freq,cluster" 5q13.3 synaptic vesicle glycoprotein 2C 3506 rs31517 LECT2 3950 5 135314928 NM_002302 NP_002293 A/G I58V minus 493712 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.4 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31.1-q32 leukocyte cell-derived chemotaxin 2 3507 rs31517 LECT2 3950 5 135314928 NM_002302 NP_002293 A/G I58V minus 493712 1303 SEQUENOM CEPH CEPH (92) 92 0.45 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31.1-q32 leukocyte cell-derived chemotaxin 2 3508 rs31517 LECT2 3950 5 135314928 NM_002302 NP_002293 A/G I58V minus 2988010 738 YUSUKE JBIC-ALLELE Japanese (752) 1492 0.4 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31.1-q32 leukocyte cell-derived chemotaxin 2 3509 rs31517 LECT2 3950 5 135314928 NM_002302 NP_002293 A/G I58V minus 23739175 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.29 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31.1-q32 leukocyte cell-derived chemotaxin 2 3510 rs31517 LECT2 3950 5 135314928 NM_002302 NP_002293 A/G I58V minus 23739175 1372 PERLEGEN AFD_AFR_PANEL African American (24) 22 0.5 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31.1-q32 leukocyte cell-derived chemotaxin 2 3511 rs31517 LECT2 3950 5 135314928 NM_002302 NP_002293 A/G I58V minus 23739175 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.31 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31.1-q32 leukocyte cell-derived chemotaxin 2 3512 rs31726 CLG 64857 19 44606588 NM_022835 NP_073746 C/T R950K minus 721211 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.39 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 likely ortholog of mouse common-site lymphoma/leukemia GEF 3513 rs31726 CLG 64857 19 44606588 NM_022835 NP_073746 C/T R950K minus 4932100 738 YUSUKE JBIC-ALLELE Japanese (752) 1492 0.47 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 likely ortholog of mouse common-site lymphoma/leukemia GEF 3514 rs31726 CLG 64857 19 44606588 NM_022835 NP_073746 C/T R950K minus 23812895 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.42 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 likely ortholog of mouse common-site lymphoma/leukemia GEF 3515 rs31726 CLG 64857 19 44606588 NM_022835 NP_073746 C/T R950K minus 23812895 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 likely ortholog of mouse common-site lymphoma/leukemia GEF 3516 rs31726 CLG 64857 19 44606588 NM_022835 NP_073746 C/T R950K minus 23812895 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.2 likely ortholog of mouse common-site lymphoma/leukemia GEF 3517 rs31728 CLG 64857 19 44607598 NM_022835 NP_073746 C/G P1287A minus 689619 1303 SEQUENOM CEPH CEPH (92) 92 0.44 120 "by doubleHit,freq,cluster" 19q13.2 likely ortholog of mouse common-site lymphoma/leukemia GEF 3518 rs31728 CLG 64857 19 44607598 NM_022835 NP_073746 C/G P1287A minus 3231929 738 YUSUKE JBIC-ALLELE Japanese (752) 1480 0.47 120 "by doubleHit,freq,cluster" 19q13.2 likely ortholog of mouse common-site lymphoma/leukemia GEF 3519 rs31738 PCDHB1 29930 5 140413374 NM_013340 NP_037472 A/G I712T minus 637454 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by submitter,freq,cluster" 5q31 protocadherin beta 1 3520 rs31738 PCDHB1 29930 5 140413374 NM_013340 NP_037472 A/G I712T minus 23675260 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by submitter,freq,cluster" 5q31 protocadherin beta 1 3521 rs31738 PCDHB1 29930 5 140413374 NM_013340 NP_037472 A/G I712T minus 23675260 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by submitter,freq,cluster" 5q31 protocadherin beta 1 3522 rs31738 PCDHB1 29930 5 140413374 NM_013340 NP_037472 A/G I712T minus 23675260 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 1 123 "by submitter,freq,cluster" 5q31 protocadherin beta 1 3523 rs31849 PCDHB3 56132 5 140460539 NM_018937 NP_061760 C/T K41R minus 630104 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by doubleHit,freq,cluster" 5q31 protocadherin beta 3 3524 rs31849 PCDHB3 56132 5 140460539 NM_018937 NP_061760 C/T K41R minus 23350582 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.09 123 "by doubleHit,freq,cluster" 5q31 protocadherin beta 3 3525 rs31849 PCDHB3 56132 5 140460539 NM_018937 NP_061760 C/T K41R minus 23350582 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "by doubleHit,freq,cluster" 5q31 protocadherin beta 3 3526 rs31849 PCDHB3 56132 5 140460539 NM_018937 NP_061760 C/T K41R minus 23350582 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.05 123 "by doubleHit,freq,cluster" 5q31 protocadherin beta 3 3527 rs31853 PCDHB2 56133 5 140454940 NM_018936 NP_061759 A/G V128I plus 1335672 638 TSC-CSHL TSC_42_AA TSC African American (42) 78 0.06 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31 protocadherin beta 2 3528 rs31853 PCDHB2 56133 5 140454940 NM_018936 NP_061759 A/G V128I plus 1335672 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 82 0.12 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31 protocadherin beta 2 3529 rs31853 PCDHB2 56133 5 140454940 NM_018936 NP_061759 A/G V128I plus 1335672 640 TSC-CSHL TSC_42_A TSC Asian (42) 62 0.23 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31 protocadherin beta 2 3530 rs31853 PCDHB2 56133 5 140454940 NM_018936 NP_061759 A/G V128I plus 1335672 885 TSC-CSHL HapMap-CEPH-30-trios 114 0.05 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31 protocadherin beta 2 3531 rs31853 PCDHB2 56133 5 140454940 NM_018936 NP_061759 A/G V128I plus 1335672 1303 SEQUENOM CEPH CEPH (92) 92 0.12 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31 protocadherin beta 2 3532 rs31853 PCDHB2 56133 5 140454940 NM_018936 NP_061759 A/G V128I plus 4962170 1072 RIKENSNPRC JBIC-ALLELE Japanese (752) 1288 0.08 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31 protocadherin beta 2 3533 rs31853 PCDHB2 56133 5 140454940 NM_018936 NP_061759 A/G V128I plus 23350563 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.08 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31 protocadherin beta 2 3534 rs31853 PCDHB2 56133 5 140454940 NM_018936 NP_061759 A/G V128I plus 23350563 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31 protocadherin beta 2 3535 rs31853 PCDHB2 56133 5 140454940 NM_018936 NP_061759 A/G V128I plus 23350563 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.04 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31 protocadherin beta 2 3536 rs32408 ODZ2 57451 5 167306766 XM_047995 XP_047995 G/T L237W plus 1982411 1303 SEQUENOM CEPH CEPH (92) 92 0.43 123 "by doubleHit,submitter,freq,cluster" 5q35.1 odd Oz/ten-m homolog 2 3537 rs32408 ODZ2 57451 5 167306766 XM_047995 XP_047995 G/T L237W plus 24454765 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.4 123 "by doubleHit,submitter,freq,cluster" 5q35.1 odd Oz/ten-m homolog 2 3538 rs32408 ODZ2 57451 5 167306766 XM_047995 XP_047995 G/T L237W plus 24454765 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.37 123 "by doubleHit,submitter,freq,cluster" 5q35.1 odd Oz/ten-m homolog 2 3539 rs32408 ODZ2 57451 5 167306766 XM_047995 XP_047995 G/T L237W plus 24454765 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.33 123 "by doubleHit,submitter,freq,cluster" 5q35.1 odd Oz/ten-m homolog 2 3540 rs32957 FCHSD1 89848 5 141001280 NM_033449 NP_258260 A/G P681L plus 638311 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 1 88 by freq 5q31.3 FCH and double SH3 domains 1 3541 rs32957 FCHSD1 89848 5 141001280 NM_033449 NP_258260 A/G P681L plus 638311 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 1 88 by freq 5q31.3 FCH and double SH3 domains 1 3542 rs32957 FCHSD1 89848 5 141001280 NM_033449 NP_258260 A/G P681L plus 638311 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 1 88 by freq 5q31.3 FCH and double SH3 domains 1 3543 rs32957 FCHSD1 89848 5 141001280 NM_033449 NP_258260 A/G P681L plus 638311 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 90 0.04 88 by freq 5q31.3 FCH and double SH3 domains 1 3544 rs32957 FCHSD1 89848 5 141001280 NM_033449 NP_258260 A/G P681L plus 2146992 1303 SEQUENOM CEPH CEPH (92) 92 0.05 88 by freq 5q31.3 FCH and double SH3 domains 1 3545 rs34677 AMACR 23600 5 34034525 NM_014324 NP_055139 G/T Q239H minus 37538 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.33 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3546 rs34677 AMACR 23600 5 34034525 NM_014324 NP_055139 G/T Q239H minus 37538 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.08 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3547 rs34677 AMACR 23600 5 34034525 NM_014324 NP_055139 G/T Q239H minus 37538 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 24 0.17 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3548 rs34677 AMACR 23600 5 34034525 NM_014324 NP_055139 G/T Q239H minus 37538 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 92 0.09 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3549 rs34677 AMACR 23600 5 34034525 NM_014324 NP_055139 G/T Q239H minus 3228912 738 YUSUKE JBIC-ALLELE Japanese (752) 1310 0.1 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3550 rs34677 AMACR 23600 5 34034525 NM_014324 NP_055139 G/T Q239H minus 12675253 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 196 0.12 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3551 rs34677 AMACR 23600 5 34034525 NM_014324 NP_055139 G/T Q239H minus 12675253 775 SNP500CANCER CAUC1 Caucasian (31) 58 0.1 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3552 rs34677 AMACR 23600 5 34034525 NM_014324 NP_055139 G/T Q239H minus 12675253 776 SNP500CANCER AFR1 African / African-American (24) 46 0.04 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3553 rs34677 AMACR 23600 5 34034525 NM_014324 NP_055139 G/T Q239H minus 12675253 777 SNP500CANCER HISP1 Hispanic (23) 46 0.09 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3554 rs34677 AMACR 23600 5 34034525 NM_014324 NP_055139 G/T Q239H minus 12675253 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.24 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3555 rs34677 AMACR 23600 5 34034525 NM_014324 NP_055139 G/T Q239H minus 12675253 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.09 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3556 rs34677 AMACR 23600 5 34034525 NM_203382 NP_976316 G/T V186F minus 37538 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.33 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3557 rs34677 AMACR 23600 5 34034525 NM_203382 NP_976316 G/T V186F minus 37538 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.08 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3558 rs34677 AMACR 23600 5 34034525 NM_203382 NP_976316 G/T V186F minus 37538 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 24 0.17 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3559 rs34677 AMACR 23600 5 34034525 NM_203382 NP_976316 G/T V186F minus 37538 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 92 0.09 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3560 rs34677 AMACR 23600 5 34034525 NM_203382 NP_976316 G/T V186F minus 3228912 738 YUSUKE JBIC-ALLELE Japanese (752) 1310 0.1 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3561 rs34677 AMACR 23600 5 34034525 NM_203382 NP_976316 G/T V186F minus 12675253 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 196 0.12 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3562 rs34677 AMACR 23600 5 34034525 NM_203382 NP_976316 G/T V186F minus 12675253 775 SNP500CANCER CAUC1 Caucasian (31) 58 0.1 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3563 rs34677 AMACR 23600 5 34034525 NM_203382 NP_976316 G/T V186F minus 12675253 776 SNP500CANCER AFR1 African / African-American (24) 46 0.04 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3564 rs34677 AMACR 23600 5 34034525 NM_203382 NP_976316 G/T V186F minus 12675253 777 SNP500CANCER HISP1 Hispanic (23) 46 0.09 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3565 rs34677 AMACR 23600 5 34034525 NM_203382 NP_976316 G/T V186F minus 12675253 778 SNP500CANCER PAC1 Pacific Rim (24) 46 0.24 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3566 rs34677 AMACR 23600 5 34034525 NM_203382 NP_976316 G/T V186F minus 12675253 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.09 118 "HapMap,freq,cluster" 5p13.2-q11.1 alpha-methylacyl-CoA racemase 3567 rs34899 RHOBTB3 22836 5 95116957 NM_014899 NP_055714 A/G N262D plus 1788541 1303 SEQUENOM CEPH CEPH (92) 92 0.21 121 "by doubleHit,submitter,freq,cluster" 5q15 Rho-related BTB domain containing 3 3568 rs35195 CDH11 1009 16 63583219 NM_001797 NP_001788 A/G T255M plus 1711242 885 TSC-CSHL HapMap-CEPH-30-trios 116 0.31 123 "HapMap,doubleHit,freq,cluster" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3569 rs35195 CDH11 1009 16 63583219 NM_001797 NP_001788 A/G T255M plus 1711242 1303 SEQUENOM CEPH CEPH (92) 92 0.33 123 "HapMap,doubleHit,freq,cluster" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3570 rs35195 CDH11 1009 16 63583219 NM_001797 NP_001788 A/G T255M plus 24008248 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.35 123 "HapMap,doubleHit,freq,cluster" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3571 rs35195 CDH11 1009 16 63583219 NM_001797 NP_001788 A/G T255M plus 24008248 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "HapMap,doubleHit,freq,cluster" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3572 rs35195 CDH11 1009 16 63583219 NM_001797 NP_001788 A/G T255M plus 24008248 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.38 123 "HapMap,doubleHit,freq,cluster" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3573 rs35195 CDH11 1009 16 63583219 NM_033664 NP_387513 A/G T255M plus 1711242 885 TSC-CSHL HapMap-CEPH-30-trios 116 0.31 123 "HapMap,doubleHit,freq,cluster" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3574 rs35195 CDH11 1009 16 63583219 NM_033664 NP_387513 A/G T255M plus 1711242 1303 SEQUENOM CEPH CEPH (92) 92 0.33 123 "HapMap,doubleHit,freq,cluster" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3575 rs35195 CDH11 1009 16 63583219 NM_033664 NP_387513 A/G T255M plus 24008248 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.35 123 "HapMap,doubleHit,freq,cluster" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3576 rs35195 CDH11 1009 16 63583219 NM_033664 NP_387513 A/G T255M plus 24008248 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "HapMap,doubleHit,freq,cluster" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3577 rs35195 CDH11 1009 16 63583219 NM_033664 NP_387513 A/G T255M plus 24008248 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.38 123 "HapMap,doubleHit,freq,cluster" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3578 rs35213 CDH11 1009 16 63573588 NM_001797 NP_001788 A/C S373A plus 630553 1303 SEQUENOM CEPH CEPH (92) 92 0.36 123 "by doubleHit,freq" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3579 rs35213 CDH11 1009 16 63573588 NM_001797 NP_001788 A/C S373A plus 23443387 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.29 123 "by doubleHit,freq" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3580 rs35213 CDH11 1009 16 63573588 NM_001797 NP_001788 A/C S373A plus 23443387 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.39 123 "by doubleHit,freq" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3581 rs35213 CDH11 1009 16 63573588 NM_001797 NP_001788 A/C S373A plus 23443387 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by doubleHit,freq" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3582 rs35213 CDH11 1009 16 63573588 NM_033664 NP_387513 A/C S373A plus 630553 1303 SEQUENOM CEPH CEPH (92) 92 0.36 123 "by doubleHit,freq" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3583 rs35213 CDH11 1009 16 63573588 NM_033664 NP_387513 A/C S373A plus 23443387 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.29 123 "by doubleHit,freq" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3584 rs35213 CDH11 1009 16 63573588 NM_033664 NP_387513 A/C S373A plus 23443387 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.39 123 "by doubleHit,freq" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3585 rs35213 CDH11 1009 16 63573588 NM_033664 NP_387513 A/C S373A plus 23443387 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by doubleHit,freq" 16q22.1 "cadherin 11, type 2, OB-cadherin (osteoblast)" 3586 rs36259 LASS4 79603 19 8232904 NM_024552 NP_078828 A/G A366T plus 496166 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.22 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 LAG1 longevity assurance homolog 4 (S. cerevisiae) 3587 rs36259 LASS4 79603 19 8232904 NM_024552 NP_078828 A/G A366T plus 496166 1303 SEQUENOM CEPH CEPH (92) 93 0.16 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 LAG1 longevity assurance homolog 4 (S. cerevisiae) 3588 rs36259 LASS4 79603 19 8232904 NM_024552 NP_078828 A/G A366T plus 3229559 738 YUSUKE JBIC-ALLELE Japanese (752) 1498 0.17 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 LAG1 longevity assurance homolog 4 (S. cerevisiae) 3589 rs36259 LASS4 79603 19 8232904 NM_024552 NP_078828 A/G A366T plus 23582637 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.21 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 LAG1 longevity assurance homolog 4 (S. cerevisiae) 3590 rs36259 LASS4 79603 19 8232904 NM_024552 NP_078828 A/G A366T plus 23582637 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.37 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 LAG1 longevity assurance homolog 4 (S. cerevisiae) 3591 rs36259 LASS4 79603 19 8232904 NM_024552 NP_078828 A/G A366T plus 23582637 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.26 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 LAG1 longevity assurance homolog 4 (S. cerevisiae) 3592 rs36571 ASC1p100 84164 22 28525267 NM_032204 NP_115580 A/G P423S plus 40440 1303 SEQUENOM CEPH CEPH (92) 92 0.13 123 by freq 22q12.1 ASC-1 complex subunit P100 3593 rs36657 TMC4 147798 19 59356021 NM_144686 NP_653287 C/G Q683E minus 21521848 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.48 123 "HapMap,doubleHit,freq" 19q13.42 transmembrane channel-like 4 3594 rs36657 TMC4 147798 19 59356021 NM_144686 NP_653287 C/G Q683E minus 24816111 1303 SEQUENOM CEPH CEPH (92) 184 0.38 123 "HapMap,doubleHit,freq" 19q13.42 transmembrane channel-like 4 3595 rs36686 B3GNT3 10331 19 17783795 NM_014256 NP_055071 A/G R328H plus 505854 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.22 121 "HapMap,doubleHit,freq,cluster" 19p13.1 "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3" 3596 rs36686 B3GNT3 10331 19 17783795 NM_014256 NP_055071 A/G R328H plus 505854 1303 SEQUENOM CEPH CEPH (92) 92 0.23 121 "HapMap,doubleHit,freq,cluster" 19p13.1 "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3" 3597 rs36686 B3GNT3 10331 19 17783795 NM_014256 NP_055071 A/G R328H plus 3196573 738 YUSUKE JBIC-ALLELE Japanese (752) 1484 0.46 121 "HapMap,doubleHit,freq,cluster" 19p13.1 "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3" 3598 rs37369 AGXT2 64902 5 35072872 NM_031900 NP_114106 C/T V140I plus 3205030 738 YUSUKE JBIC-ALLELE Japanese (752) 1498 0.36 123 "HapMap,submitter,freq,cluster" 5p13 alanine-glyoxylate aminotransferase 2 3599 rs37369 AGXT2 64902 5 35072872 NM_031900 NP_114106 C/T V140I plus 14655015 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.11 123 "HapMap,submitter,freq,cluster" 5p13 alanine-glyoxylate aminotransferase 2 3600 rs37369 AGXT2 64902 5 35072872 NM_031900 NP_114106 C/T V140I plus 14655015 1303 SEQUENOM CEPH CEPH (92) 92 0.13 123 "HapMap,submitter,freq,cluster" 5p13 alanine-glyoxylate aminotransferase 2 3601 rs37369 AGXT2 64902 5 35072872 NM_031900 NP_114106 C/T V140I plus 23986321 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.08 123 "HapMap,submitter,freq,cluster" 5p13 alanine-glyoxylate aminotransferase 2 3602 rs37369 AGXT2 64902 5 35072872 NM_031900 NP_114106 C/T V140I plus 23986321 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.35 123 "HapMap,submitter,freq,cluster" 5p13 alanine-glyoxylate aminotransferase 2 3603 rs37369 AGXT2 64902 5 35072872 NM_031900 NP_114106 C/T V140I plus 23986321 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.48 123 "HapMap,submitter,freq,cluster" 5p13 alanine-glyoxylate aminotransferase 2 3604 rs38794 ANKIB1 54467 7 91672690 XM_377955 XP_377955 A/C L1283M plus 43387 1303 SEQUENOM CEPH CEPH (92) 92 0.49 121 by freq 7q21.3 ankyrin repeat and IBR domain containing 1 3605 rs40401 IL3 3562 5 131424377 NM_000588 NP_000579 C/T P27S plus 830808 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.21 123 "HapMap,doubleHit,freq,cluster" 5q31.1 "interleukin 3 (colony-stimulating factor, multiple)" 3606 rs40401 IL3 3562 5 131424377 NM_000588 NP_000579 C/T P27S plus 830808 1303 SEQUENOM CEPH CEPH (92) 92 0.19 123 "HapMap,doubleHit,freq,cluster" 5q31.1 "interleukin 3 (colony-stimulating factor, multiple)" 3607 rs40401 IL3 3562 5 131424377 NM_000588 NP_000579 C/T P27S plus 2981902 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.48 123 "HapMap,doubleHit,freq,cluster" 5q31.1 "interleukin 3 (colony-stimulating factor, multiple)" 3608 rs40401 IL3 3562 5 131424377 NM_000588 NP_000579 C/T P27S plus 2981902 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 46 0.26 123 "HapMap,doubleHit,freq,cluster" 5q31.1 "interleukin 3 (colony-stimulating factor, multiple)" 3609 rs40401 IL3 3562 5 131424377 NM_000588 NP_000579 C/T P27S plus 2989272 738 YUSUKE JBIC-ALLELE Japanese (752) 1484 0.42 123 "HapMap,doubleHit,freq,cluster" 5q31.1 "interleukin 3 (colony-stimulating factor, multiple)" 3610 rs40401 IL3 3562 5 131424377 NM_000588 NP_000579 C/T P27S plus 4323372 649 FHCRC POPU1 USA (20) 40 0.3 123 "HapMap,doubleHit,freq,cluster" 5q31.1 "interleukin 3 (colony-stimulating factor, multiple)" 3611 rs40401 IL3 3562 5 131424377 NM_000588 NP_000579 C/T P27S plus 23737132 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.24 123 "HapMap,doubleHit,freq,cluster" 5q31.1 "interleukin 3 (colony-stimulating factor, multiple)" 3612 rs40401 IL3 3562 5 131424377 NM_000588 NP_000579 C/T P27S plus 23737132 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.48 123 "HapMap,doubleHit,freq,cluster" 5q31.1 "interleukin 3 (colony-stimulating factor, multiple)" 3613 rs40401 IL3 3562 5 131424377 NM_000588 NP_000579 C/T P27S plus 23737132 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.35 123 "HapMap,doubleHit,freq,cluster" 5q31.1 "interleukin 3 (colony-stimulating factor, multiple)" 3614 rs40986 FBXL3P 26223 5 135304213 NM_012159 NP_036291 A/G P51L minus 551368 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31 F-box and leucine-rich repeat protein 3 pseudogene 3615 rs40986 FBXL3P 26223 5 135304213 NM_012159 NP_036291 A/G P51L minus 551368 1303 SEQUENOM CEPH CEPH (92) 92 0.37 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31 F-box and leucine-rich repeat protein 3 pseudogene 3616 rs40986 FBXL3P 26223 5 135304213 NM_012159 NP_036291 A/G P51L minus 24665870 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.25 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31 F-box and leucine-rich repeat protein 3 pseudogene 3617 rs40986 FBXL3P 26223 5 135304213 NM_012159 NP_036291 A/G P51L minus 24665870 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.16 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31 F-box and leucine-rich repeat protein 3 pseudogene 3618 rs40986 FBXL3P 26223 5 135304213 NM_012159 NP_036291 A/G P51L minus 24665870 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.21 123 "HapMap,doubleHit,submitter,freq,cluster" 5q31 F-box and leucine-rich repeat protein 3 pseudogene 3619 rs42138 IMAA 387254 16 21438995 NM_199182 NP_954651 A/G S65G minus 7917762 1303 SEQUENOM CEPH CEPH (92) 92 0.15 120 "by cluster,freq" 16p12 hLAT1-3TM 3620 rs42524 COL1A2 1278 7 93687890 NM_000089 NP_000080 C/G P549A plus 3127654 638 TSC-CSHL TSC_42_AA TSC African American (42) 83 0.24 121 "by cluster,freq" 7q22.1 "collagen, type I, alpha 2" 3621 rs42524 COL1A2 1278 7 93687890 NM_000089 NP_000080 C/G P549A plus 3127654 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 83 0.31 121 "by cluster,freq" 7q22.1 "collagen, type I, alpha 2" 3622 rs42524 COL1A2 1278 7 93687890 NM_000089 NP_000080 C/G P549A plus 3127654 640 TSC-CSHL TSC_42_A TSC Asian (42) 83 0.14 121 "by cluster,freq" 7q22.1 "collagen, type I, alpha 2" 3623 rs42524 COL1A2 1278 7 93687890 NM_000089 NP_000080 C/G P549A plus 3127654 1303 SEQUENOM CEPH CEPH (92) 92 0.42 121 "by cluster,freq" 7q22.1 "collagen, type I, alpha 2" 3624 rs42942 PES1 23481 22 29301907 NM_014303 NP_055118 A/T T264S plus 13383550 1303 SEQUENOM CEPH CEPH (92) 92 0.04 120 by freq 22q12.1 "pescadillo homolog 1, containing BRCT domain (zebrafish)" 3625 rs85276 DDX20 11218 1 112021373 NM_007204 NP_009135 C/T I762T plus 91721 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 1 123 "by doubleHit,submitter,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 3626 rs85276 DDX20 11218 1 112021373 NM_007204 NP_009135 C/T I762T plus 91721 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 20 0.4 123 "by doubleHit,submitter,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 3627 rs85276 DDX20 11218 1 112021373 NM_007204 NP_009135 C/T I762T plus 91721 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 24 0.08 123 "by doubleHit,submitter,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 3628 rs85276 DDX20 11218 1 112021373 NM_007204 NP_009135 C/T I762T plus 91721 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.15 123 "by doubleHit,submitter,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 3629 rs85276 DDX20 11218 1 112021373 NM_007204 NP_009135 C/T I762T plus 91721 1303 SEQUENOM CEPH CEPH (92) 92 0.23 123 "by doubleHit,submitter,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 3630 rs85276 DDX20 11218 1 112021373 NM_007204 NP_009135 C/T I762T plus 23183332 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "by doubleHit,submitter,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 3631 rs85276 DDX20 11218 1 112021373 NM_007204 NP_009135 C/T I762T plus 23183332 1372 PERLEGEN AFD_AFR_PANEL African American (24) 40 0.43 123 "by doubleHit,submitter,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 3632 rs85276 DDX20 11218 1 112021373 NM_007204 NP_009135 C/T I762T plus 23183332 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by doubleHit,submitter,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 3633 rs86312 NAGLU 4669 17 37949759 NM_000263 NP_000254 C/G R737G plus 92758 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.04 123 "HapMap,doubleHit,freq,cluster" 17q21 "N-acetylglucosaminidase, alpha- (Sanfilippo disease IIIB)" 3634 rs86312 NAGLU 4669 17 37949759 NM_000263 NP_000254 C/G R737G plus 92758 1303 SEQUENOM CEPH CEPH (92) 92 0.04 123 "HapMap,doubleHit,freq,cluster" 17q21 "N-acetylglucosaminidase, alpha- (Sanfilippo disease IIIB)" 3635 rs86312 NAGLU 4669 17 37949759 NM_000263 NP_000254 C/G R737G plus 23630363 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "HapMap,doubleHit,freq,cluster" 17q21 "N-acetylglucosaminidase, alpha- (Sanfilippo disease IIIB)" 3636 rs86312 NAGLU 4669 17 37949759 NM_000263 NP_000254 C/G R737G plus 23630363 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.22 123 "HapMap,doubleHit,freq,cluster" 17q21 "N-acetylglucosaminidase, alpha- (Sanfilippo disease IIIB)" 3637 rs86312 NAGLU 4669 17 37949759 NM_000263 NP_000254 C/G R737G plus 23630363 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,doubleHit,freq,cluster" 17q21 "N-acetylglucosaminidase, alpha- (Sanfilippo disease IIIB)" 3638 rs90951 CLECSF14 10462 17 6922121 NM_006344 NP_006335 A/G C35R plus 97429 1303 SEQUENOM CEPH CEPH (92) 92 0.3 123 "by doubleHit,freq,cluster" 17p13.2 "C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 14 (macrophage-derived)" 3639 rs90951 CLECSF14 10462 17 6922121 NM_006344 NP_006335 A/G C35R plus 4951189 738 YUSUKE JBIC-ALLELE Japanese (752) 1496 0.48 123 "by doubleHit,freq,cluster" 17p13.2 "C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 14 (macrophage-derived)" 3640 rs90951 CLECSF14 10462 17 6922121 NM_006344 NP_006335 A/G C35R plus 24209246 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "by doubleHit,freq,cluster" 17p13.2 "C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 14 (macrophage-derived)" 3641 rs90951 CLECSF14 10462 17 6922121 NM_006344 NP_006335 A/G C35R plus 24209246 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.17 123 "by doubleHit,freq,cluster" 17p13.2 "C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 14 (macrophage-derived)" 3642 rs90951 CLECSF14 10462 17 6922121 NM_006344 NP_006335 A/G C35R plus 24209246 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.42 123 "by doubleHit,freq,cluster" 17p13.2 "C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 14 (macrophage-derived)" 3643 rs90951 CLECSF14 10462 17 6922121 NM_006344 NP_006335 A/G C35R plus 24809010 1303 SEQUENOM CEPH CEPH (92) 184 0.43 123 "by doubleHit,freq,cluster" 17p13.2 "C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 14 (macrophage-derived)" 3644 rs90951 CLECSF14 10462 17 6922121 NM_182906 NP_878910 A/G C35R plus 97429 1303 SEQUENOM CEPH CEPH (92) 92 0.3 123 "by doubleHit,freq,cluster" 17p13.2 "C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 14 (macrophage-derived)" 3645 rs90951 CLECSF14 10462 17 6922121 NM_182906 NP_878910 A/G C35R plus 4951189 738 YUSUKE JBIC-ALLELE Japanese (752) 1496 0.48 123 "by doubleHit,freq,cluster" 17p13.2 "C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 14 (macrophage-derived)" 3646 rs90951 CLECSF14 10462 17 6922121 NM_182906 NP_878910 A/G C35R plus 24209246 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "by doubleHit,freq,cluster" 17p13.2 "C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 14 (macrophage-derived)" 3647 rs90951 CLECSF14 10462 17 6922121 NM_182906 NP_878910 A/G C35R plus 24209246 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.17 123 "by doubleHit,freq,cluster" 17p13.2 "C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 14 (macrophage-derived)" 3648 rs90951 CLECSF14 10462 17 6922121 NM_182906 NP_878910 A/G C35R plus 24209246 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.42 123 "by doubleHit,freq,cluster" 17p13.2 "C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 14 (macrophage-derived)" 3649 rs90951 CLECSF14 10462 17 6922121 NM_182906 NP_878910 A/G C35R plus 24809010 1303 SEQUENOM CEPH CEPH (92) 184 0.43 123 "by doubleHit,freq,cluster" 17p13.2 "C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 14 (macrophage-derived)" 3650 rs100803 MIZF 25988 11 118510342 NM_015517 NP_056332 A/G A493V minus 107340 1303 SEQUENOM CEPH CEPH (92) 92 0.41 120 "by doubleHit,freq,cluster" 11q23.3 MBD2 (methyl-CpG-binding protein)-interacting zinc finger protein 3651 rs100803 MIZF 25988 11 118510342 NM_015517 NP_056332 A/G A493V minus 4927339 738 YUSUKE JBIC-ALLELE Japanese (752) 1478 0.28 120 "by doubleHit,freq,cluster" 11q23.3 MBD2 (methyl-CpG-binding protein)-interacting zinc finger protein 3652 rs100803 MIZF 25988 11 118510342 NM_198971 NP_945322 A/G A493V minus 107340 1303 SEQUENOM CEPH CEPH (92) 92 0.41 120 "by doubleHit,freq,cluster" 11q23.3 MBD2 (methyl-CpG-binding protein)-interacting zinc finger protein 3653 rs100803 MIZF 25988 11 118510342 NM_198971 NP_945322 A/G A493V minus 4927339 738 YUSUKE JBIC-ALLELE Japanese (752) 1478 0.28 120 "by doubleHit,freq,cluster" 11q23.3 MBD2 (methyl-CpG-binding protein)-interacting zinc finger protein 3654 rs103612 NUP214 8021 9 131049646 NM_005085 NP_005076 C/T P574S plus 110164 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.32 123 "HapMap,doubleHit,freq,cluster" 9q34.1 nucleoporin 214kDa 3655 rs103612 NUP214 8021 9 131049646 NM_005085 NP_005076 C/T P574S plus 110164 1303 SEQUENOM CEPH CEPH (92) 92 0.4 123 "HapMap,doubleHit,freq,cluster" 9q34.1 nucleoporin 214kDa 3656 rs103612 NUP214 8021 9 131049646 NM_005085 NP_005076 C/T P574S plus 24555978 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.4 123 "HapMap,doubleHit,freq,cluster" 9q34.1 nucleoporin 214kDa 3657 rs103612 NUP214 8021 9 131049646 NM_005085 NP_005076 C/T P574S plus 24555978 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.35 123 "HapMap,doubleHit,freq,cluster" 9q34.1 nucleoporin 214kDa 3658 rs103612 NUP214 8021 9 131049646 NM_005085 NP_005076 C/T P574S plus 24555978 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.33 123 "HapMap,doubleHit,freq,cluster" 9q34.1 nucleoporin 214kDa 3659 rs106287 SKIV2L 6499 6 32043729 NM_006929 NP_008860 C/T V917M minus 1466178 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 6p21 superkiller viralicidic activity 2-like (S. cerevisiae) 3660 rs106287 SKIV2L 6499 6 32043729 NM_006929 NP_008860 C/T V917M minus 24796286 1303 SEQUENOM CEPH CEPH (92) 184 0.2 123 "by cluster,freq" 6p21 superkiller viralicidic activity 2-like (S. cerevisiae) 3661 rs123509 KBTBD5 131377 3 42708472 NM_152393 NP_689606 A/G C617R minus 131062 885 TSC-CSHL HapMap-CEPH-30-trios 116 0.27 123 "HapMap,submitter,freq,cluster" 3p21.33 kelch repeat and BTB (POZ) domain containing 5 3662 rs123509 KBTBD5 131377 3 42708472 NM_152393 NP_689606 A/G C617R minus 131062 1303 SEQUENOM CEPH CEPH (92) 92 0.35 123 "HapMap,submitter,freq,cluster" 3p21.33 kelch repeat and BTB (POZ) domain containing 5 3663 rs123509 KBTBD5 131377 3 42708472 NM_152393 NP_689606 A/G C617R minus 24325075 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.17 123 "HapMap,submitter,freq,cluster" 3p21.33 kelch repeat and BTB (POZ) domain containing 5 3664 rs123509 KBTBD5 131377 3 42708472 NM_152393 NP_689606 A/G C617R minus 24325075 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "HapMap,submitter,freq,cluster" 3p21.33 kelch repeat and BTB (POZ) domain containing 5 3665 rs123509 KBTBD5 131377 3 42708472 NM_152393 NP_689606 A/G C617R minus 24325075 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,submitter,freq,cluster" 3p21.33 kelch repeat and BTB (POZ) domain containing 5 3666 rs125555 MBD1 4152 18 46054177 NM_002384 NP_002375 C/G P345A minus 133108 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 16 0.25 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3667 rs125555 MBD1 4152 18 46054177 NM_002384 NP_002375 C/G P345A minus 133108 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 82 0.2 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3668 rs125555 MBD1 4152 18 46054177 NM_002384 NP_002375 C/G P345A minus 149187 524 LDN AUTISM USA (autistic probands) 20 0.05 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3669 rs125555 MBD1 4152 18 46054177 NM_002384 NP_002375 C/G P345A minus 149187 1303 SEQUENOM CEPH CEPH (92) 92 0.47 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3670 rs125555 MBD1 4152 18 46054177 NM_015844 NP_056669 C/G P345A minus 133108 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 16 0.25 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3671 rs125555 MBD1 4152 18 46054177 NM_015844 NP_056669 C/G P345A minus 133108 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 82 0.2 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3672 rs125555 MBD1 4152 18 46054177 NM_015844 NP_056669 C/G P345A minus 149187 524 LDN AUTISM USA (autistic probands) 20 0.05 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3673 rs125555 MBD1 4152 18 46054177 NM_015844 NP_056669 C/G P345A minus 149187 1303 SEQUENOM CEPH CEPH (92) 92 0.47 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3674 rs125555 MBD1 4152 18 46054177 NM_015846 NP_056671 C/G P401A minus 133108 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 16 0.25 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3675 rs125555 MBD1 4152 18 46054177 NM_015846 NP_056671 C/G P401A minus 133108 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 82 0.2 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3676 rs125555 MBD1 4152 18 46054177 NM_015846 NP_056671 C/G P401A minus 149187 524 LDN AUTISM USA (autistic probands) 20 0.05 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3677 rs125555 MBD1 4152 18 46054177 NM_015846 NP_056671 C/G P401A minus 149187 1303 SEQUENOM CEPH CEPH (92) 92 0.47 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3678 rs125555 MBD1 4152 18 46054177 NM_015847 NP_056723 C/G P352A minus 133108 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 16 0.25 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3679 rs125555 MBD1 4152 18 46054177 NM_015847 NP_056723 C/G P352A minus 133108 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 82 0.2 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3680 rs125555 MBD1 4152 18 46054177 NM_015847 NP_056723 C/G P352A minus 149187 524 LDN AUTISM USA (autistic probands) 20 0.05 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3681 rs125555 MBD1 4152 18 46054177 NM_015847 NP_056723 C/G P352A minus 149187 1303 SEQUENOM CEPH CEPH (92) 92 0.47 120 "by cluster,freq" 18q21 methyl-CpG binding domain protein 1 3682 rs129415 SCUBE1 80274 22 41947893 NM_173050 NP_766638 C/G G398R plus 2985439 738 YUSUKE JBIC-ALLELE Japanese (752) 1484 0.48 123 "by doubleHit,freq,cluster" 22q13 "signal peptide, CUB domain, EGF-like 1" 3683 rs129415 SCUBE1 80274 22 41947893 NM_173050 NP_766638 C/G G398R plus 24091239 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.2 123 "by doubleHit,freq,cluster" 22q13 "signal peptide, CUB domain, EGF-like 1" 3684 rs129415 SCUBE1 80274 22 41947893 NM_173050 NP_766638 C/G G398R plus 24091239 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.14 123 "by doubleHit,freq,cluster" 22q13 "signal peptide, CUB domain, EGF-like 1" 3685 rs129415 SCUBE1 80274 22 41947893 NM_173050 NP_766638 C/G G398R plus 24091239 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.48 123 "by doubleHit,freq,cluster" 22q13 "signal peptide, CUB domain, EGF-like 1" 3686 rs130063 HTR1B 3351 6 78228741 NM_000863 NP_000854 A/G I367V minus 137623 538 SGRP HTR1B-POOL 1820 0 78 by freq 6q13 5-hydroxytryptamine (serotonin) receptor 1B 3687 rs130063 HTR1B 3351 6 78228741 NM_000863 NP_000854 A/G I367V minus 137623 539 SGRP SCHIZOPHRENIA_LD_SAMPLE Predominantly European-American and African-American (schizophrenia and schizoaffective disorder) 1660 0 78 by freq 6q13 5-hydroxytryptamine (serotonin) receptor 1B 3688 rs130063 HTR1B 3351 6 78228741 NM_000863 NP_000854 A/G I367V minus 137623 540 SGRP ETHNIC_DIVERSITY_SAMPLE Mixed 160 1 78 by freq 6q13 5-hydroxytryptamine (serotonin) receptor 1B 3689 rs130063 HTR1B 3351 6 78228741 NM_000863 NP_000854 A/G I367V minus 137623 1303 SEQUENOM CEPH CEPH (92) 92 1 78 by freq 6q13 5-hydroxytryptamine (serotonin) receptor 1B 3690 rs130064 HTR1B 3351 6 78228720 NM_000863 NP_000854 A/G E374K minus 137624 538 SGRP HTR1B-POOL 1820 0 78 by freq 6q13 5-hydroxytryptamine (serotonin) receptor 1B 3691 rs130064 HTR1B 3351 6 78228720 NM_000863 NP_000854 A/G E374K minus 137624 539 SGRP SCHIZOPHRENIA_LD_SAMPLE Predominantly European-American and African-American (schizophrenia and schizoaffective disorder) 1660 0 78 by freq 6q13 5-hydroxytryptamine (serotonin) receptor 1B 3692 rs130064 HTR1B 3351 6 78228720 NM_000863 NP_000854 A/G E374K minus 137624 540 SGRP ETHNIC_DIVERSITY_SAMPLE Mixed 160 1 78 by freq 6q13 5-hydroxytryptamine (serotonin) receptor 1B 3693 rs130064 HTR1B 3351 6 78228720 NM_000863 NP_000854 A/G E374K minus 137624 1303 SEQUENOM CEPH CEPH (92) 92 1 78 by freq 6q13 5-hydroxytryptamine (serotonin) receptor 1B 3694 rs132653 APOL3 80833 22 34881323 NM_145640 NP_663615 A/C S39R minus 1465169 758 TSC-CSHL CEL_AFRICAN_AMERICAN CELERA African-American (30) 52 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 3" 3695 rs132653 APOL3 80833 22 34881323 NM_145640 NP_663615 A/C S39R minus 1465169 759 TSC-CSHL CEL_ASIAN CELERA Asians (30) 58 0.03 123 "HapMap,doubleHit,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 3" 3696 rs132653 APOL3 80833 22 34881323 NM_145640 NP_663615 A/C S39R minus 1465169 760 TSC-CSHL CEL_CAUCASIAN CELERA Caucasians (30) 56 0.18 123 "HapMap,doubleHit,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 3" 3697 rs132653 APOL3 80833 22 34881323 NM_145640 NP_663615 A/C S39R minus 1465169 780 TSC-CSHL WICGR8_ASIAN_POOLED WICGR Asian (30) 84 0.02 123 "HapMap,doubleHit,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 3" 3698 rs132653 APOL3 80833 22 34881323 NM_145640 NP_663615 A/C S39R minus 1465169 782 TSC-CSHL WICGR6_CAUCASIAN_POOLED WICGR Caucasian (48) 96 0.17 123 "HapMap,doubleHit,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 3" 3699 rs132653 APOL3 80833 22 34881323 NM_145640 NP_663615 A/C S39R minus 1465169 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.14 123 "HapMap,doubleHit,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 3" 3700 rs132653 APOL3 80833 22 34881323 NM_145640 NP_663615 A/C S39R minus 23644163 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.25 123 "HapMap,doubleHit,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 3" 3701 rs132653 APOL3 80833 22 34881323 NM_145640 NP_663615 A/C S39R minus 23644163 1372 PERLEGEN AFD_AFR_PANEL African American (24) 23 0.5 123 "HapMap,doubleHit,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 3" 3702 rs132653 APOL3 80833 22 34881323 NM_145640 NP_663615 A/C S39R minus 23644163 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.04 123 "HapMap,doubleHit,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 3" 3703 rs133072 GPR24 2847 22 39400043 NM_005297 NP_005288 A/G N32D plus 8009757 1303 SEQUENOM CEPH CEPH (92) 92 0.46 121 "by doubleHit,freq,cluster" 22q13.2 G protein-coupled receptor 24 3704 rs133885 MYO18B 84700 22 24483843 NM_032608 NP_115997 A/G G44E plus 24581329 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.07 123 "by doubleHit,freq" 22q11.2-q12.1 myosin XVIIIB 3705 rs133885 MYO18B 84700 22 24483843 NM_032608 NP_115997 A/G G44E plus 24581329 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "by doubleHit,freq" 22q11.2-q12.1 myosin XVIIIB 3706 rs133885 MYO18B 84700 22 24483843 NM_032608 NP_115997 A/G G44E plus 24581329 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by doubleHit,freq" 22q11.2-q12.1 myosin XVIIIB 3707 rs136175 APOL1 8542 22 34986066 NM_003661 NP_003652 A/G M228I plus 3195162 738 YUSUKE JBIC-ALLELE Japanese (752) 1500 0.19 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3708 rs136175 APOL1 8542 22 34986066 NM_003661 NP_003652 A/G M228I plus 7997337 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.27 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3709 rs136175 APOL1 8542 22 34986066 NM_003661 NP_003652 A/G M228I plus 7997337 1303 SEQUENOM CEPH CEPH (92) 92 0.18 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3710 rs136175 APOL1 8542 22 34986066 NM_003661 NP_003652 A/G M228I plus 24599289 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.25 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3711 rs136175 APOL1 8542 22 34986066 NM_003661 NP_003652 A/G M228I plus 24599289 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 1 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3712 rs136175 APOL1 8542 22 34986066 NM_003661 NP_003652 A/G M228I plus 24599289 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.22 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3713 rs136175 APOL1 8542 22 34986066 NM_145343 NP_663318 A/G M244I plus 3195162 738 YUSUKE JBIC-ALLELE Japanese (752) 1500 0.19 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3714 rs136175 APOL1 8542 22 34986066 NM_145343 NP_663318 A/G M244I plus 7997337 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.27 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3715 rs136175 APOL1 8542 22 34986066 NM_145343 NP_663318 A/G M244I plus 7997337 1303 SEQUENOM CEPH CEPH (92) 92 0.18 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3716 rs136175 APOL1 8542 22 34986066 NM_145343 NP_663318 A/G M244I plus 24599289 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.25 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3717 rs136175 APOL1 8542 22 34986066 NM_145343 NP_663318 A/G M244I plus 24599289 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 1 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3718 rs136175 APOL1 8542 22 34986066 NM_145343 NP_663318 A/G M244I plus 24599289 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.22 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3719 rs136175 APOL1 8542 22 34986066 NM_145344 NP_663319 A/G M228I plus 3195162 738 YUSUKE JBIC-ALLELE Japanese (752) 1500 0.19 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3720 rs136175 APOL1 8542 22 34986066 NM_145344 NP_663319 A/G M228I plus 7997337 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.27 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3721 rs136175 APOL1 8542 22 34986066 NM_145344 NP_663319 A/G M228I plus 7997337 1303 SEQUENOM CEPH CEPH (92) 92 0.18 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3722 rs136175 APOL1 8542 22 34986066 NM_145344 NP_663319 A/G M228I plus 24599289 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.25 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3723 rs136175 APOL1 8542 22 34986066 NM_145344 NP_663319 A/G M228I plus 24599289 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 1 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3724 rs136175 APOL1 8542 22 34986066 NM_145344 NP_663319 A/G M228I plus 24599289 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.22 123 "HapMap,submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3725 rs136176 APOL1 8542 22 34986146 NM_003661 NP_003652 A/G R255K plus 3195163 738 YUSUKE JBIC-ALLELE Japanese (752) 1496 0.19 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3726 rs136176 APOL1 8542 22 34986146 NM_003661 NP_003652 A/G R255K plus 8006792 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3727 rs136176 APOL1 8542 22 34986146 NM_003661 NP_003652 A/G R255K plus 24599292 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.25 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3728 rs136176 APOL1 8542 22 34986146 NM_003661 NP_003652 A/G R255K plus 24599292 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 1 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3729 rs136176 APOL1 8542 22 34986146 NM_003661 NP_003652 A/G R255K plus 24599292 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.22 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3730 rs136176 APOL1 8542 22 34986146 NM_145343 NP_663318 A/G R271K plus 3195163 738 YUSUKE JBIC-ALLELE Japanese (752) 1496 0.19 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3731 rs136176 APOL1 8542 22 34986146 NM_145343 NP_663318 A/G R271K plus 8006792 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3732 rs136176 APOL1 8542 22 34986146 NM_145343 NP_663318 A/G R271K plus 24599292 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.25 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3733 rs136176 APOL1 8542 22 34986146 NM_145343 NP_663318 A/G R271K plus 24599292 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 1 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3734 rs136176 APOL1 8542 22 34986146 NM_145343 NP_663318 A/G R271K plus 24599292 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.22 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3735 rs136176 APOL1 8542 22 34986146 NM_145344 NP_663319 A/G R255K plus 3195163 738 YUSUKE JBIC-ALLELE Japanese (752) 1496 0.19 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3736 rs136176 APOL1 8542 22 34986146 NM_145344 NP_663319 A/G R255K plus 8006792 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3737 rs136176 APOL1 8542 22 34986146 NM_145344 NP_663319 A/G R255K plus 24599292 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.25 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3738 rs136176 APOL1 8542 22 34986146 NM_145344 NP_663319 A/G R255K plus 24599292 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 1 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3739 rs136176 APOL1 8542 22 34986146 NM_145344 NP_663319 A/G R255K plus 24599292 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.22 123 "by submitter,freq,cluster" 22q13.1 "apolipoprotein L, 1" 3740 rs136467 RFPL2 10739 22 30911408 NM_006605 NP_006596 C/T V258I plus 8288357 1303 SEQUENOM CEPH CEPH (92) 92 0.18 123 "by doubleHit,freq,cluster" 22q12.3 ret finger protein-like 2 3741 rs136468 RFPL2 10739 22 30911429 NM_006605 NP_006596 A/G R251C plus 8293330 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by doubleHit,cluster" 22q12.3 ret finger protein-like 2 3742 rs136470 RFPL2 10739 22 30911480 NM_006605 NP_006596 C/T S234G plus 8293332 1303 SEQUENOM CEPH CEPH (92) 92 0.23 121 "by doubleHit,freq,cluster" 22q12.3 ret finger protein-like 2 3743 rs136478 RFPL2 10739 22 30913577 NM_006605 NP_006596 C/T C51Y plus 144631 1303 SEQUENOM CEPH CEPH (92) 92 0.45 119 "by doubleHit,freq,cluster" 22q12.3 ret finger protein-like 2 3744 rs136853 CACNA1I 8911 22 38382686 NM_021096 NP_066919 A/G I1040V plus 8009386 1303 SEQUENOM CEPH CEPH (92) 92 0.46 121 "by cluster,freq" 22q13.1 "calcium channel, voltage-dependent, alpha 1I subunit" 3745 rs137203 SEZ6L 23544 22 25013385 NM_021115 NP_066938 G/T W185L plus 145466 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.02 123 "HapMap,submitter,freq,cluster" 22q12.1 seizure related 6 homolog (mouse)-like 3746 rs137203 SEZ6L 23544 22 25013385 NM_021115 NP_066938 G/T W185L plus 145466 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "HapMap,submitter,freq,cluster" 22q12.1 seizure related 6 homolog (mouse)-like 3747 rs137203 SEZ6L 23544 22 25013385 NM_021115 NP_066938 G/T W185L plus 23560703 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.05 123 "HapMap,submitter,freq,cluster" 22q12.1 seizure related 6 homolog (mouse)-like 3748 rs137203 SEZ6L 23544 22 25013385 NM_021115 NP_066938 G/T W185L plus 23560703 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.28 123 "HapMap,submitter,freq,cluster" 22q12.1 seizure related 6 homolog (mouse)-like 3749 rs137203 SEZ6L 23544 22 25013385 NM_021115 NP_066938 G/T W185L plus 23560703 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.02 123 "HapMap,submitter,freq,cluster" 22q12.1 seizure related 6 homolog (mouse)-like 3750 rs138993 SCUBE1 80274 22 41934705 NM_173050 NP_766638 A/G S648P plus 2985436 738 YUSUKE JBIC-ALLELE Japanese (752) 1458 0.09 121 "by doubleHit,cluster" 22q13 "signal peptide, CUB domain, EGF-like 1" 3751 rs139297 ARP10 164668 22 37821904 NM_181773 NP_861438 C/G G105R plus 21854414 1303 SEQUENOM CEPH CEPH (92) 92 0.32 121 "by doubleHit,freq" 22q13.1 ARP10 protein 3752 rs139298 ARP10 164668 22 37821952 NM_181773 NP_861438 A/G K121E plus 21852780 1303 SEQUENOM CEPH CEPH (92) 92 0.47 121 "by doubleHit,freq" 22q13.1 ARP10 protein 3753 rs139299 ARP10 164668 22 37821954 NM_181773 NP_861438 C/G K121N plus 21855284 1303 SEQUENOM CEPH CEPH (92) 92 0.42 121 "by doubleHit,freq" 22q13.1 ARP10 protein 3754 rs139300 ARP10 164668 22 37822009 NM_181773 NP_861438 A/G K140E plus 8008945 1303 SEQUENOM CEPH CEPH (92) 92 0.08 121 by freq 22q13.1 ARP10 protein 3755 rs139302 ARP10 164668 22 37822538 NM_181773 NP_861438 C/G E178D plus 8289843 1303 SEQUENOM CEPH CEPH (92) 92 0.27 121 "by doubleHit,freq" 22q13.1 ARP10 protein 3756 rs140054 GTSE1 51512 22 45042919 NM_016426 NP_057510 A/G W506R minus 8021617 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.08 121 "HapMap,submitter,freq,cluster" 22q13.2-q13.3 G-2 and S-phase expressed 1 3757 rs140054 GTSE1 51512 22 45042919 NM_016426 NP_057510 A/G W506R minus 8021617 1303 SEQUENOM CEPH CEPH (92) 92 0.21 121 "HapMap,submitter,freq,cluster" 22q13.2-q13.3 G-2 and S-phase expressed 1 3758 rs140504 BCR 613 22 21951923 NM_004327 NP_004318 A/G N796S plus 2068045 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.13 123 "HapMap,doubleHit,freq,cluster" 22q11.23 breakpoint cluster region 3759 rs140504 BCR 613 22 21951923 NM_004327 NP_004318 A/G N796S plus 2068045 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "HapMap,doubleHit,freq,cluster" 22q11.23 breakpoint cluster region 3760 rs140504 BCR 613 22 21951923 NM_004327 NP_004318 A/G N796S plus 3172556 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 48 0.06 123 "HapMap,doubleHit,freq,cluster" 22q11.23 breakpoint cluster region 3761 rs140504 BCR 613 22 21951923 NM_004327 NP_004318 A/G N796S plus 3224984 738 YUSUKE JBIC-ALLELE Japanese (752) 1484 0.49 123 "HapMap,doubleHit,freq,cluster" 22q11.23 breakpoint cluster region 3762 rs140504 BCR 613 22 21951923 NM_004327 NP_004318 A/G N796S plus 24095624 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.13 123 "HapMap,doubleHit,freq,cluster" 22q11.23 breakpoint cluster region 3763 rs140504 BCR 613 22 21951923 NM_004327 NP_004318 A/G N796S plus 24095624 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.15 123 "HapMap,doubleHit,freq,cluster" 22q11.23 breakpoint cluster region 3764 rs140504 BCR 613 22 21951923 NM_004327 NP_004318 A/G N796S plus 24095624 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 23 0.5 123 "HapMap,doubleHit,freq,cluster" 22q11.23 breakpoint cluster region 3765 rs140504 BCR 613 22 21951923 NM_021574 NP_067585 A/G N796S plus 2068045 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.13 123 "HapMap,doubleHit,freq,cluster" 22q11.23 breakpoint cluster region 3766 rs140504 BCR 613 22 21951923 NM_021574 NP_067585 A/G N796S plus 2068045 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "HapMap,doubleHit,freq,cluster" 22q11.23 breakpoint cluster region 3767 rs140504 BCR 613 22 21951923 NM_021574 NP_067585 A/G N796S plus 3172556 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 48 0.06 123 "HapMap,doubleHit,freq,cluster" 22q11.23 breakpoint cluster region 3768 rs140504 BCR 613 22 21951923 NM_021574 NP_067585 A/G N796S plus 3224984 738 YUSUKE JBIC-ALLELE Japanese (752) 1484 0.49 123 "HapMap,doubleHit,freq,cluster" 22q11.23 breakpoint cluster region 3769 rs140504 BCR 613 22 21951923 NM_021574 NP_067585 A/G N796S plus 24095624 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.13 123 "HapMap,doubleHit,freq,cluster" 22q11.23 breakpoint cluster region 3770 rs140504 BCR 613 22 21951923 NM_021574 NP_067585 A/G N796S plus 24095624 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.15 123 "HapMap,doubleHit,freq,cluster" 22q11.23 breakpoint cluster region 3771 rs140504 BCR 613 22 21951923 NM_021574 NP_067585 A/G N796S plus 24095624 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 23 0.5 123 "HapMap,doubleHit,freq,cluster" 22q11.23 breakpoint cluster region 3772 rs140523 SCO2 9997 22 49252926 NM_005138 NP_005129 C/G R20P minus 149017 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.35 116 "HapMap,doubleHit,freq,cluster" 22q13.33 SCO cytochrome oxidase deficient homolog 2 (yeast) 3773 rs140523 SCO2 9997 22 49252926 NM_005138 NP_005129 C/G R20P minus 149017 1303 SEQUENOM CEPH CEPH (92) 92 0.16 116 "HapMap,doubleHit,freq,cluster" 22q13.33 SCO cytochrome oxidase deficient homolog 2 (yeast) 3774 rs140598 FBN1 2200 15 46566822 NM_000138 NP_000129 C/G P1148A minus 149095 527 OEFNER AUTOSOME Stanford Autosome Collection 17 0.5 102 by freq 15q21.1 fibrillin 1 (Marfan syndrome) 3775 rs140598 FBN1 2200 15 46566822 NM_000138 NP_000129 C/G P1148A minus 3176334 619 WICVAR MITOGPOP6 CORIELL Mixed 40 0.08 102 by freq 15q21.1 fibrillin 1 (Marfan syndrome) 3776 rs140599 FBN1 2200 15 46566806 NM_000138 NP_000129 A/G C1153Y minus 149096 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 78 HapMap 15q21.1 fibrillin 1 (Marfan syndrome) 3777 rs140638 FBN1 2200 15 46554082 NM_000138 NP_000129 A/G N1341S minus 149135 885 TSC-CSHL HapMap-CEPH-30-trios 118 1 78 HapMap 15q21.1 fibrillin 1 (Marfan syndrome) 3778 rs140638 FBN1 2200 15 46554082 NM_000138 NP_000129 A/G N1341S minus 149135 1303 SEQUENOM CEPH CEPH (92) 92 1 78 HapMap 15q21.1 fibrillin 1 (Marfan syndrome) 3779 rs140693 MBD4 8930 3 130638149 NM_003925 NP_003916 A/G E346K minus 149192 524 LDN AUTISM USA (autistic probands) 24 0.09 123 "by submitter,freq,cluster" 3q21-q22 methyl-CpG binding domain protein 4 3780 rs140693 MBD4 8930 3 130638149 NM_003925 NP_003916 A/G E346K minus 149192 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by submitter,freq,cluster" 3q21-q22 methyl-CpG binding domain protein 4 3781 rs140693 MBD4 8930 3 130638149 NM_003925 NP_003916 A/G E346K minus 3255099 506 NCBI NIHPDR NIHPDR 872 0.08 123 "by submitter,freq,cluster" 3q21-q22 methyl-CpG binding domain protein 4 3782 rs140693 MBD4 8930 3 130638149 NM_003925 NP_003916 A/G E346K minus 4385591 693 EGP_SNPS PDR90 NIHPDR 178 0.07 123 "by submitter,freq,cluster" 3q21-q22 methyl-CpG binding domain protein 4 3783 rs140693 MBD4 8930 3 130638149 NM_003925 NP_003916 A/G E346K minus 23909871 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by submitter,freq,cluster" 3q21-q22 methyl-CpG binding domain protein 4 3784 rs140693 MBD4 8930 3 130638149 NM_003925 NP_003916 A/G E346K minus 23909871 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "by submitter,freq,cluster" 3q21-q22 methyl-CpG binding domain protein 4 3785 rs140693 MBD4 8930 3 130638149 NM_003925 NP_003916 A/G E346K minus 23909871 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.44 123 "by submitter,freq,cluster" 3q21-q22 methyl-CpG binding domain protein 4 3786 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 153384 902 AFFY Caucasian 14 0.29 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3787 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 153384 903 AFFY Asian 2 0.5 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3788 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 153384 904 AFFY CEPH 12 0.42 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3789 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 153384 905 AFFY PDpanel 46 0.24 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3790 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 153384 1303 SEQUENOM CEPH CEPH (92) 92 0.37 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3791 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 887467 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.33 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3792 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 887467 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 1 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3793 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 887467 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.36 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3794 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 887467 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 176 0.38 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3795 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 3172559 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 60 0.23 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3796 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 5586305 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 202 0.29 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3797 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 5586305 775 SNP500CANCER CAUC1 Caucasian (31) 60 0.28 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3798 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 5586305 776 SNP500CANCER AFR1 African / African-American (24) 48 0.19 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3799 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 5586305 777 SNP500CANCER HISP1 Hispanic (23) 46 0.28 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3800 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 5586305 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.42 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3801 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 16355781 693 EGP_SNPS PDR90 NIHPDR 180 0.26 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3802 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 24664348 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.38 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3803 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 24664348 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3804 rs144848 BRCA2 675 13 31804729 NM_000059 NP_000050 G/T N372H minus 24664348 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.25 123 "by doubleHit,submitter,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3805 rs150857 CARKL 23729 17 3473386 NM_013276 NP_037408 C/T E215K plus 3237077 738 YUSUKE JBIC-ALLELE Japanese (752) 1496 0.23 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13 carbohydrate kinase-like 3806 rs150857 CARKL 23729 17 3473386 NM_013276 NP_037408 C/T E215K plus 4063916 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.09 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13 carbohydrate kinase-like 3807 rs150857 CARKL 23729 17 3473386 NM_013276 NP_037408 C/T E215K plus 4063916 1303 SEQUENOM CEPH CEPH (92) 92 0.19 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13 carbohydrate kinase-like 3808 rs150857 CARKL 23729 17 3473386 NM_013276 NP_037408 C/T E215K plus 23624334 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13 carbohydrate kinase-like 3809 rs150857 CARKL 23729 17 3473386 NM_013276 NP_037408 C/T E215K plus 23624334 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13 carbohydrate kinase-like 3810 rs150857 CARKL 23729 17 3473386 NM_013276 NP_037408 C/T E215K plus 23624334 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.13 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13 carbohydrate kinase-like 3811 rs153477 GM2A 2760 5 150619602 NM_000405 NP_000396 A/G I59V plus 1428295 1303 SEQUENOM CEPH CEPH (92) 92 0.32 123 "by doubleHit,submitter,freq,cluster" 5q31.3-q33.1 GM2 ganglioside activator 3812 rs153477 GM2A 2760 5 150619602 NM_000405 NP_000396 A/G I59V plus 3213722 738 YUSUKE JBIC-ALLELE Japanese (752) 1492 0.32 123 "by doubleHit,submitter,freq,cluster" 5q31.3-q33.1 GM2 ganglioside activator 3813 rs153477 GM2A 2760 5 150619602 NM_000405 NP_000396 A/G I59V plus 23766710 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.38 123 "by doubleHit,submitter,freq,cluster" 5q31.3-q33.1 GM2 ganglioside activator 3814 rs153477 GM2A 2760 5 150619602 NM_000405 NP_000396 A/G I59V plus 23766710 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.43 123 "by doubleHit,submitter,freq,cluster" 5q31.3-q33.1 GM2 ganglioside activator 3815 rs153477 GM2A 2760 5 150619602 NM_000405 NP_000396 A/G I59V plus 23766710 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.42 123 "by doubleHit,submitter,freq,cluster" 5q31.3-q33.1 GM2 ganglioside activator 3816 rs153478 GM2A 2760 5 150619632 NM_000405 NP_000396 A/G M69V plus 1428296 1303 SEQUENOM CEPH CEPH (92) 92 0.35 123 "by doubleHit,freq,cluster" 5q31.3-q33.1 GM2 ganglioside activator 3817 rs153478 GM2A 2760 5 150619632 NM_000405 NP_000396 A/G M69V plus 24686202 1371 PERLEGEN AFD_EUR_PANEL European American (24) 40 0.3 123 "by doubleHit,freq,cluster" 5q31.3-q33.1 GM2 ganglioside activator 3818 rs153478 GM2A 2760 5 150619632 NM_000405 NP_000396 A/G M69V plus 24686202 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.13 123 "by doubleHit,freq,cluster" 5q31.3-q33.1 GM2 ganglioside activator 3819 rs153478 GM2A 2760 5 150619632 NM_000405 NP_000396 A/G M69V plus 24686202 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 1 123 "by doubleHit,freq,cluster" 5q31.3-q33.1 GM2 ganglioside activator 3820 rs156631 PLA2G4C 8605 19 53290635 NM_003706 NP_003697 C/T S203P minus 582726 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.04 123 "by doubleHit,freq,cluster" 19q13.3 "phospholipase A2, group IVC (cytosolic, calcium-independent)" 3821 rs156631 PLA2G4C 8605 19 53290635 NM_003706 NP_003697 C/T S203P minus 582726 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 22 0.27 123 "by doubleHit,freq,cluster" 19q13.3 "phospholipase A2, group IVC (cytosolic, calcium-independent)" 3822 rs156631 PLA2G4C 8605 19 53290635 NM_003706 NP_003697 C/T S203P minus 582726 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.36 123 "by doubleHit,freq,cluster" 19q13.3 "phospholipase A2, group IVC (cytosolic, calcium-independent)" 3823 rs156631 PLA2G4C 8605 19 53290635 NM_003706 NP_003697 C/T S203P minus 582726 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 92 0.36 123 "by doubleHit,freq,cluster" 19q13.3 "phospholipase A2, group IVC (cytosolic, calcium-independent)" 3824 rs156631 PLA2G4C 8605 19 53290635 NM_003706 NP_003697 C/T S203P minus 3255093 506 NCBI NIHPDR NIHPDR 82 0.38 123 "by doubleHit,freq,cluster" 19q13.3 "phospholipase A2, group IVC (cytosolic, calcium-independent)" 3825 rs156631 PLA2G4C 8605 19 53290635 NM_003706 NP_003697 C/T S203P minus 4931759 738 YUSUKE JBIC-ALLELE Japanese (752) 1476 0.1 123 "by doubleHit,freq,cluster" 19q13.3 "phospholipase A2, group IVC (cytosolic, calcium-independent)" 3826 rs156631 PLA2G4C 8605 19 53290635 NM_003706 NP_003697 C/T S203P minus 5229529 1303 SEQUENOM CEPH CEPH (92) 92 0.3 123 "by doubleHit,freq,cluster" 19q13.3 "phospholipase A2, group IVC (cytosolic, calcium-independent)" 3827 rs156631 PLA2G4C 8605 19 53290635 NM_003706 NP_003697 C/T S203P minus 16316168 693 EGP_SNPS PDR90 NIHPDR 166 0.39 123 "by doubleHit,freq,cluster" 19q13.3 "phospholipase A2, group IVC (cytosolic, calcium-independent)" 3828 rs156631 PLA2G4C 8605 19 53290635 NM_003706 NP_003697 C/T S203P minus 24531552 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.23 123 "by doubleHit,freq,cluster" 19q13.3 "phospholipase A2, group IVC (cytosolic, calcium-independent)" 3829 rs156631 PLA2G4C 8605 19 53290635 NM_003706 NP_003697 C/T S203P minus 24531552 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.22 123 "by doubleHit,freq,cluster" 19q13.3 "phospholipase A2, group IVC (cytosolic, calcium-independent)" 3830 rs156631 PLA2G4C 8605 19 53290635 NM_003706 NP_003697 C/T S203P minus 24531552 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.17 123 "by doubleHit,freq,cluster" 19q13.3 "phospholipase A2, group IVC (cytosolic, calcium-independent)" 3831 rs156697 GSTO2 119391 10 106029175 NM_183239 NP_899062 C/T N142D minus 773736 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.4 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 2 3832 rs156697 GSTO2 119391 10 106029175 NM_183239 NP_899062 C/T N142D minus 773736 1303 SEQUENOM CEPH CEPH (92) 92 0.32 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 2 3833 rs156697 GSTO2 119391 10 106029175 NM_183239 NP_899062 C/T N142D minus 3241600 738 YUSUKE JBIC-ALLELE Japanese (752) 738 0.26 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 2 3834 rs156697 GSTO2 119391 10 106029175 NM_183239 NP_899062 C/T N142D minus 16334038 901 AFFY AfAm 12 0.08 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 2 3835 rs156697 GSTO2 119391 10 106029175 NM_183239 NP_899062 C/T N142D minus 16334038 902 AFFY Caucasian 18 0.44 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 2 3836 rs156697 GSTO2 119391 10 106029175 NM_183239 NP_899062 C/T N142D minus 16334038 903 AFFY Asian 4 0.5 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 2 3837 rs156697 GSTO2 119391 10 106029175 NM_183239 NP_899062 C/T N142D minus 16334038 904 AFFY CEPH 12 1 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 2 3838 rs156697 GSTO2 119391 10 106029175 NM_183239 NP_899062 C/T N142D minus 16334038 905 AFFY PDpanel 44 0.32 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 2 3839 rs156697 GSTO2 119391 10 106029175 NM_183239 NP_899062 C/T N142D minus 24503173 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.42 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 2 3840 rs156697 GSTO2 119391 10 106029175 NM_183239 NP_899062 C/T N142D minus 24503173 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.17 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 2 3841 rs156697 GSTO2 119391 10 106029175 NM_183239 NP_899062 C/T N142D minus 24503173 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.21 123 "HapMap,doubleHit,submitter,freq,cluster" 10q25.1 glutathione S-transferase omega 2 3842 rs157024 MYR8 23026 13 108575504 XM_028522 XP_028522 A/G I1469M plus 464363 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by doubleHit,freq" 13q33.3 myosin heavy chain Myr 8 3843 rs157024 MYR8 23026 13 108575504 XM_028522 XP_028522 A/G I1469M plus 24549423 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.23 123 "by doubleHit,freq" 13q33.3 myosin heavy chain Myr 8 3844 rs157024 MYR8 23026 13 108575504 XM_028522 XP_028522 A/G I1469M plus 24549423 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by doubleHit,freq" 13q33.3 myosin heavy chain Myr 8 3845 rs157024 MYR8 23026 13 108575504 XM_028522 XP_028522 A/G I1469M plus 24549423 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.17 123 "by doubleHit,freq" 13q33.3 myosin heavy chain Myr 8 3846 rs157496 PDZK3 23037 5 32123131 NM_178140 NP_835260 A/G T1274A plus 698075 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.24 123 "HapMap,doubleHit,submitter,freq,cluster" 5p13.3 PDZ domain containing 3 3847 rs157496 PDZK3 23037 5 32123131 NM_178140 NP_835260 A/G T1274A plus 698075 1303 SEQUENOM CEPH CEPH (92) 92 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 5p13.3 PDZ domain containing 3 3848 rs157496 PDZK3 23037 5 32123131 NM_178140 NP_835260 A/G T1274A plus 24009438 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.1 123 "HapMap,doubleHit,submitter,freq,cluster" 5p13.3 PDZ domain containing 3 3849 rs157496 PDZK3 23037 5 32123131 NM_178140 NP_835260 A/G T1274A plus 24009438 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.36 123 "HapMap,doubleHit,submitter,freq,cluster" 5p13.3 PDZ domain containing 3 3850 rs157496 PDZK3 23037 5 32123131 NM_178140 NP_835260 A/G T1274A plus 24009438 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 5p13.3 PDZ domain containing 3 3851 rs158551 BCAS1 8537 20 52078573 NM_003657 NP_003648 C/T V163A minus 614289 1303 SEQUENOM CEPH CEPH (92) 92 0.1 123 "by cluster,freq" 20q13.2-q13.3 breast carcinoma amplified sequence 1 3852 rs158551 BCAS1 8537 20 52078573 NM_003657 NP_003648 C/T V163A minus 24095060 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.06 123 "by cluster,freq" 20q13.2-q13.3 breast carcinoma amplified sequence 1 3853 rs158551 BCAS1 8537 20 52078573 NM_003657 NP_003648 C/T V163A minus 24095060 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "by cluster,freq" 20q13.2-q13.3 breast carcinoma amplified sequence 1 3854 rs158551 BCAS1 8537 20 52078573 NM_003657 NP_003648 C/T V163A minus 24095060 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.46 123 "by cluster,freq" 20q13.2-q13.3 breast carcinoma amplified sequence 1 3855 rs160277 CSPG2 1462 5 82873387 NM_004385 NP_004376 A/C D2937Y minus 666549 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.42 123 "HapMap,doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3856 rs160277 CSPG2 1462 5 82873387 NM_004385 NP_004376 A/C D2937Y minus 666549 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 12 0.5 123 "HapMap,doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3857 rs160277 CSPG2 1462 5 82873387 NM_004385 NP_004376 A/C D2937Y minus 666549 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.43 123 "HapMap,doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3858 rs160277 CSPG2 1462 5 82873387 NM_004385 NP_004376 A/C D2937Y minus 666549 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 92 0.34 123 "HapMap,doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3859 rs160277 CSPG2 1462 5 82873387 NM_004385 NP_004376 A/C D2937Y minus 666549 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.35 123 "HapMap,doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3860 rs160277 CSPG2 1462 5 82873387 NM_004385 NP_004376 A/C D2937Y minus 4920089 738 YUSUKE JBIC-ALLELE Japanese (752) 1492 0.46 123 "HapMap,doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3861 rs160277 CSPG2 1462 5 82873387 NM_004385 NP_004376 A/C D2937Y minus 23674326 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.44 123 "HapMap,doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3862 rs160277 CSPG2 1462 5 82873387 NM_004385 NP_004376 A/C D2937Y minus 23674326 1372 PERLEGEN AFD_AFR_PANEL African American (24) 23 0.5 123 "HapMap,doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3863 rs160277 CSPG2 1462 5 82873387 NM_004385 NP_004376 A/C D2937Y minus 23674326 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.23 123 "HapMap,doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3864 rs160278 CSPG2 1462 5 82871480 NM_004385 NP_004376 A/T F2301Y minus 739666 771 TSC-CSHL SC_12_A CORIELL Asian (12) 18 0.33 123 "by doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3865 rs160278 CSPG2 1462 5 82871480 NM_004385 NP_004376 A/T F2301Y minus 739666 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.43 123 "by doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3866 rs160278 CSPG2 1462 5 82871480 NM_004385 NP_004376 A/T F2301Y minus 739666 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 88 0.47 123 "by doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3867 rs160278 CSPG2 1462 5 82871480 NM_004385 NP_004376 A/T F2301Y minus 1295190 1303 SEQUENOM CEPH CEPH (92) 92 0.49 123 "by doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3868 rs160278 CSPG2 1462 5 82871480 NM_004385 NP_004376 A/T F2301Y minus 4920091 738 YUSUKE JBIC-ALLELE Japanese (752) 1492 0.48 123 "by doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3869 rs160278 CSPG2 1462 5 82871480 NM_004385 NP_004376 A/T F2301Y minus 23674325 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.43 123 "by doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3870 rs160278 CSPG2 1462 5 82871480 NM_004385 NP_004376 A/T F2301Y minus 23674325 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.45 123 "by doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3871 rs160278 CSPG2 1462 5 82871480 NM_004385 NP_004376 A/T F2301Y minus 23674325 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.24 123 "by doubleHit,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 3872 rs160632 RIOK2 55781 5 96529279 NM_018343 NP_060813 A/G G349R minus 540235 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.4 123 "HapMap,doubleHit,freq,cluster" 5q15 RIO kinase 2 (yeast) 3873 rs160632 RIOK2 55781 5 96529279 NM_018343 NP_060813 A/G G349R minus 540235 1303 SEQUENOM CEPH CEPH (92) 92 0.45 123 "HapMap,doubleHit,freq,cluster" 5q15 RIO kinase 2 (yeast) 3874 rs160632 RIOK2 55781 5 96529279 NM_018343 NP_060813 A/G G349R minus 3228863 738 YUSUKE JBIC-ALLELE Japanese (752) 1490 0.48 123 "HapMap,doubleHit,freq,cluster" 5q15 RIO kinase 2 (yeast) 3875 rs160632 RIOK2 55781 5 96529279 NM_018343 NP_060813 A/G G349R minus 16335693 901 AFFY AfAm 5 0.5 123 "HapMap,doubleHit,freq,cluster" 5q15 RIO kinase 2 (yeast) 3876 rs160632 RIOK2 55781 5 96529279 NM_018343 NP_060813 A/G G349R minus 16335693 902 AFFY Caucasian 22 0.45 123 "HapMap,doubleHit,freq,cluster" 5q15 RIO kinase 2 (yeast) 3877 rs160632 RIOK2 55781 5 96529279 NM_018343 NP_060813 A/G G349R minus 16335693 903 AFFY Asian 10 0.4 123 "HapMap,doubleHit,freq,cluster" 5q15 RIO kinase 2 (yeast) 3878 rs160632 RIOK2 55781 5 96529279 NM_018343 NP_060813 A/G G349R minus 16335693 904 AFFY CEPH 10 0.4 123 "HapMap,doubleHit,freq,cluster" 5q15 RIO kinase 2 (yeast) 3879 rs160632 RIOK2 55781 5 96529279 NM_018343 NP_060813 A/G G349R minus 16335693 905 AFFY PDpanel 46 0.3 123 "HapMap,doubleHit,freq,cluster" 5q15 RIO kinase 2 (yeast) 3880 rs160632 RIOK2 55781 5 96529279 NM_018343 NP_060813 A/G G349R minus 24381674 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.48 123 "HapMap,doubleHit,freq,cluster" 5q15 RIO kinase 2 (yeast) 3881 rs160632 RIOK2 55781 5 96529279 NM_018343 NP_060813 A/G G349R minus 24381674 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.45 123 "HapMap,doubleHit,freq,cluster" 5q15 RIO kinase 2 (yeast) 3882 rs160632 RIOK2 55781 5 96529279 NM_018343 NP_060813 A/G G349R minus 24381674 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.41 123 "HapMap,doubleHit,freq,cluster" 5q15 RIO kinase 2 (yeast) 3883 rs160838 RGL3 57139 19 11387759 XM_290867 XP_290867 C/T A164V minus 1873156 1303 SEQUENOM CEPH CEPH (92) 92 0.47 121 "by doubleHit,freq,cluster" 19p13.2 ral guanine nucleotide dissociation stimulator-like 3 3884 rs161400 CTNS 1497 17 3508145 NM_004937 NP_004928 C/T T260I plus 620031 1303 SEQUENOM CEPH CEPH (92) 92 0.04 121 "by doubleHit,freq,cluster" 17p13 "cystinosis, nephropathic" 3885 rs161557 HB-1 57824 5 143180246 NM_021182 NP_067005 C/T H16Y plus 23920417 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.11 123 "by submitter,freq,cluster" 5q32 minor histocompatibility antigen HB-1 3886 rs161557 HB-1 57824 5 143180246 NM_021182 NP_067005 C/T H16Y plus 23920417 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.23 123 "by submitter,freq,cluster" 5q32 minor histocompatibility antigen HB-1 3887 rs161557 HB-1 57824 5 143180246 NM_021182 NP_067005 C/T H16Y plus 23920417 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 23 0.5 123 "by submitter,freq,cluster" 5q32 minor histocompatibility antigen HB-1 3888 rs161704 IL31RA 133396 5 55242201 NM_139017 NP_620586 C/T S497N minus 1991445 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.42 123 "HapMap,doubleHit,freq,cluster" 5q11.2 interleukin 31 receptor A 3889 rs161704 IL31RA 133396 5 55242201 NM_139017 NP_620586 C/T S497N minus 1991445 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.22 123 "HapMap,doubleHit,freq,cluster" 5q11.2 interleukin 31 receptor A 3890 rs161704 IL31RA 133396 5 55242201 NM_139017 NP_620586 C/T S497N minus 1991445 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.19 123 "HapMap,doubleHit,freq,cluster" 5q11.2 interleukin 31 receptor A 3891 rs161704 IL31RA 133396 5 55242201 NM_139017 NP_620586 C/T S497N minus 1991445 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.3 123 "HapMap,doubleHit,freq,cluster" 5q11.2 interleukin 31 receptor A 3892 rs161704 IL31RA 133396 5 55242201 NM_139017 NP_620586 C/T S497N minus 23352578 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.33 123 "HapMap,doubleHit,freq,cluster" 5q11.2 interleukin 31 receptor A 3893 rs161704 IL31RA 133396 5 55242201 NM_139017 NP_620586 C/T S497N minus 23352578 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.48 123 "HapMap,doubleHit,freq,cluster" 5q11.2 interleukin 31 receptor A 3894 rs161704 IL31RA 133396 5 55242201 NM_139017 NP_620586 C/T S497N minus 23352578 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.42 123 "HapMap,doubleHit,freq,cluster" 5q11.2 interleukin 31 receptor A 3895 rs161931 ZNF578 147660 19 57706158 NM_152472 NP_689685 C/T E13K minus 734787 901 AFFY AfAm 12 1 121 "by doubleHit,freq" 19q13.41 zinc finger protein 578 3896 rs161931 ZNF578 147660 19 57706158 NM_152472 NP_689685 C/T E13K minus 734787 902 AFFY Caucasian 20 1 121 "by doubleHit,freq" 19q13.41 zinc finger protein 578 3897 rs161931 ZNF578 147660 19 57706158 NM_152472 NP_689685 C/T E13K minus 734787 903 AFFY Asian 12 1 121 "by doubleHit,freq" 19q13.41 zinc finger protein 578 3898 rs161931 ZNF578 147660 19 57706158 NM_152472 NP_689685 C/T E13K minus 734787 904 AFFY CEPH 12 1 121 "by doubleHit,freq" 19q13.41 zinc finger protein 578 3899 rs161931 ZNF578 147660 19 57706158 NM_152472 NP_689685 C/T E13K minus 734787 905 AFFY PDpanel 44 0.05 121 "by doubleHit,freq" 19q13.41 zinc finger protein 578 3900 rs162036 MTRR 4552 5 7938959 NM_002454 NP_002445 A/G K350R plus 612812 1303 SEQUENOM CEPH CEPH (92) 92 0.34 123 "by doubleHit,freq,cluster" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 3901 rs162036 MTRR 4552 5 7938959 NM_002454 NP_002445 A/G K350R plus 23260951 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 "by doubleHit,freq,cluster" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 3902 rs162036 MTRR 4552 5 7938959 NM_002454 NP_002445 A/G K350R plus 23260951 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.32 123 "by doubleHit,freq,cluster" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 3903 rs162036 MTRR 4552 5 7938959 NM_002454 NP_002445 A/G K350R plus 23260951 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.11 123 "by doubleHit,freq,cluster" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 3904 rs162036 MTRR 4552 5 7938959 NM_024010 NP_076915 A/G K377R plus 612812 1303 SEQUENOM CEPH CEPH (92) 92 0.34 123 "by doubleHit,freq,cluster" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 3905 rs162036 MTRR 4552 5 7938959 NM_024010 NP_076915 A/G K377R plus 23260951 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 "by doubleHit,freq,cluster" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 3906 rs162036 MTRR 4552 5 7938959 NM_024010 NP_076915 A/G K377R plus 23260951 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.32 123 "by doubleHit,freq,cluster" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 3907 rs162036 MTRR 4552 5 7938959 NM_024010 NP_076915 A/G K377R plus 23260951 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.11 123 "by doubleHit,freq,cluster" 5p15.3-p15.2 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 3908 rs164075 PCDH12 51294 5 141316448 NM_016580 NP_057664 A/C H385N minus 849396 1303 SEQUENOM CEPH CEPH (92) 92 0.36 123 "by submitter,freq,cluster" 5q31 protocadherin 12 3909 rs164075 PCDH12 51294 5 141316448 NM_016580 NP_057664 A/C H385N minus 4933744 738 YUSUKE JBIC-ALLELE Japanese (752) 1480 0.14 123 "by submitter,freq,cluster" 5q31 protocadherin 12 3910 rs164075 PCDH12 51294 5 141316448 NM_016580 NP_057664 A/C H385N minus 24667595 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.4 123 "by submitter,freq,cluster" 5q31 protocadherin 12 3911 rs164075 PCDH12 51294 5 141316448 NM_016580 NP_057664 A/C H385N minus 24667595 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "by submitter,freq,cluster" 5q31 protocadherin 12 3912 rs164075 PCDH12 51294 5 141316448 NM_016580 NP_057664 A/C H385N minus 24667595 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.29 123 "by submitter,freq,cluster" 5q31 protocadherin 12 3913 rs164515 PCDH12 51294 5 141315682 NM_016580 NP_057664 A/G S640N minus 4933743 738 YUSUKE JBIC-ALLELE Japanese (752) 1492 0.12 123 "by doubleHit,submitter,freq,cluster" 5q31 protocadherin 12 3914 rs164515 PCDH12 51294 5 141315682 NM_016580 NP_057664 A/G S640N minus 24621926 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.25 123 "by doubleHit,submitter,freq,cluster" 5q31 protocadherin 12 3915 rs164515 PCDH12 51294 5 141315682 NM_016580 NP_057664 A/G S640N minus 24621926 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "by doubleHit,submitter,freq,cluster" 5q31 protocadherin 12 3916 rs164515 PCDH12 51294 5 141315682 NM_016580 NP_057664 A/G S640N minus 24621926 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.25 123 "by doubleHit,submitter,freq,cluster" 5q31 protocadherin 12 3917 rs165602 NEFH 4744 22 28210597 NM_021076 NP_066554 A/C E805A plus 8001752 1303 SEQUENOM CEPH CEPH (92) 92 0.18 114 "by doubleHit,submitter,freq" 22q12.2 "neurofilament, heavy polypeptide 200kDa" 3918 rs165815 ARVCF 421 22 18334027 NM_001670 NP_001661 C/T R906Q plus 481084 771 TSC-CSHL SC_12_A CORIELL Asian (12) 22 0.46 123 "HapMap,doubleHit,freq,cluster" 22q11.21 armadillo repeat gene deletes in velocardiofacial syndrome 3919 rs165815 ARVCF 421 22 18334027 NM_001670 NP_001661 C/T R906Q plus 481084 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.46 123 "HapMap,doubleHit,freq,cluster" 22q11.21 armadillo repeat gene deletes in velocardiofacial syndrome 3920 rs165815 ARVCF 421 22 18334027 NM_001670 NP_001661 C/T R906Q plus 481084 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 24 0.08 123 "HapMap,doubleHit,freq,cluster" 22q11.21 armadillo repeat gene deletes in velocardiofacial syndrome 3921 rs165815 ARVCF 421 22 18334027 NM_001670 NP_001661 C/T R906Q plus 481084 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 90 0.12 123 "HapMap,doubleHit,freq,cluster" 22q11.21 armadillo repeat gene deletes in velocardiofacial syndrome 3922 rs165815 ARVCF 421 22 18334027 NM_001670 NP_001661 C/T R906Q plus 8287556 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.12 123 "HapMap,doubleHit,freq,cluster" 22q11.21 armadillo repeat gene deletes in velocardiofacial syndrome 3923 rs165815 ARVCF 421 22 18334027 NM_001670 NP_001661 C/T R906Q plus 8287556 1303 SEQUENOM CEPH CEPH (92) 92 0.07 123 "HapMap,doubleHit,freq,cluster" 22q11.21 armadillo repeat gene deletes in velocardiofacial syndrome 3924 rs165815 ARVCF 421 22 18334027 NM_001670 NP_001661 C/T R906Q plus 23789050 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.23 123 "HapMap,doubleHit,freq,cluster" 22q11.21 armadillo repeat gene deletes in velocardiofacial syndrome 3925 rs165815 ARVCF 421 22 18334027 NM_001670 NP_001661 C/T R906Q plus 23789050 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.45 123 "HapMap,doubleHit,freq,cluster" 22q11.21 armadillo repeat gene deletes in velocardiofacial syndrome 3926 rs165815 ARVCF 421 22 18334027 NM_001670 NP_001661 C/T R906Q plus 23789050 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.42 123 "HapMap,doubleHit,freq,cluster" 22q11.21 armadillo repeat gene deletes in velocardiofacial syndrome 3927 rs167479 RGL3 57139 19 11387765 XM_290867 XP_290867 A/C P162H minus 1937759 1303 SEQUENOM CEPH CEPH (92) 92 0.14 121 "by doubleHit,freq,cluster" 19p13.2 ral guanine nucleotide dissociation stimulator-like 3 3928 rs167479 RGL3 57139 19 11387765 XM_290867 XP_290867 A/C P162H minus 1937780 771 TSC-CSHL SC_12_A CORIELL Asian (12) 22 0.32 121 "by doubleHit,freq,cluster" 19p13.2 ral guanine nucleotide dissociation stimulator-like 3 3929 rs167479 RGL3 57139 19 11387765 XM_290867 XP_290867 A/C P162H minus 1937780 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 22 0.23 121 "by doubleHit,freq,cluster" 19p13.2 ral guanine nucleotide dissociation stimulator-like 3 3930 rs167479 RGL3 57139 19 11387765 XM_290867 XP_290867 A/C P162H minus 1937780 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 6 0.5 121 "by doubleHit,freq,cluster" 19p13.2 ral guanine nucleotide dissociation stimulator-like 3 3931 rs168107 MCLC 23155 1 109192020 NM_015127 NP_055942 G/T S318R plus 3252203 738 YUSUKE JBIC-ALLELE Japanese (752) 1282 0.03 123 "by doubleHit,submitter,freq,cluster" 1p13.3 Mid-1-related chloride channel 1 3932 rs168107 MCLC 23155 1 109192020 NM_015127 NP_055942 G/T S318R plus 24271944 1371 PERLEGEN AFD_EUR_PANEL European American (24) 40 0.45 123 "by doubleHit,submitter,freq,cluster" 1p13.3 Mid-1-related chloride channel 1 3933 rs168107 MCLC 23155 1 109192020 NM_015127 NP_055942 G/T S318R plus 24271944 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.41 123 "by doubleHit,submitter,freq,cluster" 1p13.3 Mid-1-related chloride channel 1 3934 rs168107 MCLC 23155 1 109192020 NM_015127 NP_055942 G/T S318R plus 24271944 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.02 123 "by doubleHit,submitter,freq,cluster" 1p13.3 Mid-1-related chloride channel 1 3935 rs168107 MCLC 23155 1 109192020 NM_015127 NP_055942 G/T S318R plus 24796096 1303 SEQUENOM CEPH CEPH (92) 184 0.43 123 "by doubleHit,submitter,freq,cluster" 1p13.3 Mid-1-related chloride channel 1 3936 rs169068 SSTR5 6755 16 1069873 NM_001053 NP_001044 C/T P335L plus 2987167 738 YUSUKE JBIC-ALLELE Japanese (752) 1488 0.16 113 "by doubleHit,freq,cluster" 16p13.3 somatostatin receptor 5 3937 rs169068 SSTR5 6755 16 1069873 NM_001053 NP_001044 C/T P335L plus 3173187 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 36 0.39 113 "by doubleHit,freq,cluster" 16p13.3 somatostatin receptor 5 3938 rs169547 BRCA2 675 13 31827387 NM_000059 NP_000050 A/G V2466A minus 5586320 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 200 0.01 121 "HapMap,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3939 rs169547 BRCA2 675 13 31827387 NM_000059 NP_000050 A/G V2466A minus 5586320 775 SNP500CANCER CAUC1 Caucasian (31) 60 1 121 "HapMap,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3940 rs169547 BRCA2 675 13 31827387 NM_000059 NP_000050 A/G V2466A minus 5586320 776 SNP500CANCER AFR1 African / African-American (24) 48 0.02 121 "HapMap,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3941 rs169547 BRCA2 675 13 31827387 NM_000059 NP_000050 A/G V2466A minus 5586320 777 SNP500CANCER HISP1 Hispanic (23) 46 1 121 "HapMap,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3942 rs169547 BRCA2 675 13 31827387 NM_000059 NP_000050 A/G V2466A minus 5586320 778 SNP500CANCER PAC1 Pacific Rim (24) 46 1 121 "HapMap,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3943 rs169547 BRCA2 675 13 31827387 NM_000059 NP_000050 A/G V2466A minus 16355878 693 EGP_SNPS PDR90 NIHPDR 148 0.03 121 "HapMap,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3944 rs169547 BRCA2 675 13 31827387 NM_000059 NP_000050 A/G V2466A minus 16355878 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.02 121 "HapMap,freq,cluster" 13q12.3 "breast cancer 2, early onset" 3945 rs169758 TPTE 7179 21 9928786 NM_013315 NP_037447 A/G G549E minus 2339892 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.31 88 by freq 21p11 transmembrane phosphatase with tensin homology 3946 rs169758 TPTE 7179 21 9928786 NM_013315 NP_037447 A/G G549E minus 2339892 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 88 by freq 21p11 transmembrane phosphatase with tensin homology 3947 rs169758 TPTE 7179 21 9928786 NM_013315 NP_037447 A/G G549E minus 2339892 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 88 by freq 21p11 transmembrane phosphatase with tensin homology 3948 rs169758 TPTE 7179 21 9928786 NM_013315 NP_037447 A/G G549E minus 2339892 768 TSC-CSHL WICGR3_AFRICAN_AMERICAN WICGR African-American (50) 96 0.26 88 by freq 21p11 transmembrane phosphatase with tensin homology 3949 rs169758 TPTE 7179 21 9928786 NM_013315 NP_037447 A/G G549E minus 2339892 769 TSC-CSHL WICGR4_ASIAN WICGR Asian (42) 82 0.06 88 by freq 21p11 transmembrane phosphatase with tensin homology 3950 rs169758 TPTE 7179 21 9928786 NM_013315 NP_037447 A/G G549E minus 2339892 770 TSC-CSHL WICGR5_NIGERIAN WICGR Nigerian (96) 114 0.19 88 by freq 21p11 transmembrane phosphatase with tensin homology 3951 rs169758 TPTE 7179 21 9928786 NM_013315 NP_037447 A/G G549E minus 2339892 1303 SEQUENOM CEPH CEPH (92) 92 0.01 88 by freq 21p11 transmembrane phosphatase with tensin homology 3952 rs169758 TPTE 7179 21 9928786 NM_199259 NP_954868 A/G G531E minus 2339892 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.31 88 by freq 21p11 transmembrane phosphatase with tensin homology 3953 rs169758 TPTE 7179 21 9928786 NM_199259 NP_954868 A/G G531E minus 2339892 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 88 by freq 21p11 transmembrane phosphatase with tensin homology 3954 rs169758 TPTE 7179 21 9928786 NM_199259 NP_954868 A/G G531E minus 2339892 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 88 by freq 21p11 transmembrane phosphatase with tensin homology 3955 rs169758 TPTE 7179 21 9928786 NM_199259 NP_954868 A/G G531E minus 2339892 768 TSC-CSHL WICGR3_AFRICAN_AMERICAN WICGR African-American (50) 96 0.26 88 by freq 21p11 transmembrane phosphatase with tensin homology 3956 rs169758 TPTE 7179 21 9928786 NM_199259 NP_954868 A/G G531E minus 2339892 769 TSC-CSHL WICGR4_ASIAN WICGR Asian (42) 82 0.06 88 by freq 21p11 transmembrane phosphatase with tensin homology 3957 rs169758 TPTE 7179 21 9928786 NM_199259 NP_954868 A/G G531E minus 2339892 770 TSC-CSHL WICGR5_NIGERIAN WICGR Nigerian (96) 114 0.19 88 by freq 21p11 transmembrane phosphatase with tensin homology 3958 rs169758 TPTE 7179 21 9928786 NM_199259 NP_954868 A/G G531E minus 2339892 1303 SEQUENOM CEPH CEPH (92) 92 0.01 88 by freq 21p11 transmembrane phosphatase with tensin homology 3959 rs169758 TPTE 7179 21 9928786 NM_199260 NP_954869 A/G G511E minus 2339892 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.31 88 by freq 21p11 transmembrane phosphatase with tensin homology 3960 rs169758 TPTE 7179 21 9928786 NM_199260 NP_954869 A/G G511E minus 2339892 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 88 by freq 21p11 transmembrane phosphatase with tensin homology 3961 rs169758 TPTE 7179 21 9928786 NM_199260 NP_954869 A/G G511E minus 2339892 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 88 by freq 21p11 transmembrane phosphatase with tensin homology 3962 rs169758 TPTE 7179 21 9928786 NM_199260 NP_954869 A/G G511E minus 2339892 768 TSC-CSHL WICGR3_AFRICAN_AMERICAN WICGR African-American (50) 96 0.26 88 by freq 21p11 transmembrane phosphatase with tensin homology 3963 rs169758 TPTE 7179 21 9928786 NM_199260 NP_954869 A/G G511E minus 2339892 769 TSC-CSHL WICGR4_ASIAN WICGR Asian (42) 82 0.06 88 by freq 21p11 transmembrane phosphatase with tensin homology 3964 rs169758 TPTE 7179 21 9928786 NM_199260 NP_954869 A/G G511E minus 2339892 770 TSC-CSHL WICGR5_NIGERIAN WICGR Nigerian (96) 114 0.19 88 by freq 21p11 transmembrane phosphatase with tensin homology 3965 rs169758 TPTE 7179 21 9928786 NM_199260 NP_954869 A/G G511E minus 2339892 1303 SEQUENOM CEPH CEPH (92) 92 0.01 88 by freq 21p11 transmembrane phosphatase with tensin homology 3966 rs169758 TPTE 7179 21 9928786 NM_199261 NP_954870 A/G G411E minus 2339892 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.31 88 by freq 21p11 transmembrane phosphatase with tensin homology 3967 rs169758 TPTE 7179 21 9928786 NM_199261 NP_954870 A/G G411E minus 2339892 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 88 by freq 21p11 transmembrane phosphatase with tensin homology 3968 rs169758 TPTE 7179 21 9928786 NM_199261 NP_954870 A/G G411E minus 2339892 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 88 by freq 21p11 transmembrane phosphatase with tensin homology 3969 rs169758 TPTE 7179 21 9928786 NM_199261 NP_954870 A/G G411E minus 2339892 768 TSC-CSHL WICGR3_AFRICAN_AMERICAN WICGR African-American (50) 96 0.26 88 by freq 21p11 transmembrane phosphatase with tensin homology 3970 rs169758 TPTE 7179 21 9928786 NM_199261 NP_954870 A/G G411E minus 2339892 769 TSC-CSHL WICGR4_ASIAN WICGR Asian (42) 82 0.06 88 by freq 21p11 transmembrane phosphatase with tensin homology 3971 rs169758 TPTE 7179 21 9928786 NM_199261 NP_954870 A/G G411E minus 2339892 770 TSC-CSHL WICGR5_NIGERIAN WICGR Nigerian (96) 114 0.19 88 by freq 21p11 transmembrane phosphatase with tensin homology 3972 rs169758 TPTE 7179 21 9928786 NM_199261 NP_954870 A/G G411E minus 2339892 1303 SEQUENOM CEPH CEPH (92) 92 0.01 88 by freq 21p11 transmembrane phosphatase with tensin homology 3973 rs170758 F25965 55957 19 40934929 NM_019104 NP_061977 C/T V16A plus 10933493 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 121 "HapMap,cluster" 19q13.1 protein F25965 3974 rs170758 F25965 55957 19 40934929 NM_019104 NP_061977 C/T V16A plus 10933493 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "HapMap,cluster" 19q13.1 protein F25965 3975 rs172562 TBX18 9096 6 85530477 XM_496819 XP_496819 C/T G48R plus 1746987 1303 SEQUENOM CEPH CEPH (92) 92 0.38 120 "by doubleHit,freq,cluster" 6q14-q15 T-box 18 3976 rs175916 BDP1 55814 5 70873180 NM_018429 NP_060899 C/T E2056K minus 476956 1303 SEQUENOM CEPH CEPH (92) 92 1 87 by freq 5q12-q13 "B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB" 3977 rs175916 BDP1 55814 5 70873180 NM_018429 NP_060899 C/T E2056K minus 1276603 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 87 by freq 5q12-q13 "B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB" 3978 rs175916 BDP1 55814 5 70873180 NM_018429 NP_060899 C/T E2056K minus 1276603 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 87 by freq 5q12-q13 "B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB" 3979 rs175916 BDP1 55814 5 70873180 NM_018429 NP_060899 C/T E2056K minus 1276603 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 87 by freq 5q12-q13 "B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB" 3980 rs176250 BRD2 6046 6 33052106 NM_005104 NP_005095 A/G L238F minus 824728 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "by cluster,freq" 6p21.3 bromodomain containing 2 3981 rs176250 BRD2 6046 6 33052106 NM_005104 NP_005095 A/G L238F minus 4479315 719 CGC ctrSW 122 0.02 121 "by cluster,freq" 6p21.3 bromodomain containing 2 3982 rs177386 PAPLN 89932 14 72799251 XM_370765 XP_370765 A/G G1112R plus 1722291 1303 SEQUENOM CEPH CEPH (92) 92 0.04 123 "by submitter,freq,cluster" 14q24.2 "papilin, proteoglycan-like sulfated glycoprotein" 3983 rs177386 PAPLN 89932 14 72799251 XM_370765 XP_370765 A/G G1112R plus 23654029 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.02 123 "by submitter,freq,cluster" 14q24.2 "papilin, proteoglycan-like sulfated glycoprotein" 3984 rs177386 PAPLN 89932 14 72799251 XM_370765 XP_370765 A/G G1112R plus 23654029 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "by submitter,freq,cluster" 14q24.2 "papilin, proteoglycan-like sulfated glycoprotein" 3985 rs177386 PAPLN 89932 14 72799251 XM_370765 XP_370765 A/G G1112R plus 23654029 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by submitter,freq,cluster" 14q24.2 "papilin, proteoglycan-like sulfated glycoprotein" 3986 rs179196 UNQ5810 388218 16 19204720 NM_207384 NP_997267 G/T S16A plus 1853266 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.07 100 "HapMap,submitter,freq" 16p13.11 QRWT5810 3987 rs179196 UNQ5810 388218 16 19204720 NM_207384 NP_997267 G/T S16A plus 1853266 1303 SEQUENOM CEPH CEPH (92) 92 0.03 100 "HapMap,submitter,freq" 16p13.11 QRWT5810 3988 rs180749 AGXT2 64902 5 35069362 NM_031900 NP_114106 A/G T212I plus 626437 1303 SEQUENOM CEPH CEPH (92) 92 0.01 123 "by doubleHit,freq,cluster" 5p13 alanine-glyoxylate aminotransferase 2 3989 rs180749 AGXT2 64902 5 35069362 NM_031900 NP_114106 A/G T212I plus 3234086 738 YUSUKE JBIC-ALLELE Japanese (752) 1478 0.2 123 "by doubleHit,freq,cluster" 5p13 alanine-glyoxylate aminotransferase 2 3990 rs180749 AGXT2 64902 5 35069362 NM_031900 NP_114106 A/G T212I plus 23986266 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by doubleHit,freq,cluster" 5p13 alanine-glyoxylate aminotransferase 2 3991 rs180749 AGXT2 64902 5 35069362 NM_031900 NP_114106 A/G T212I plus 23986266 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "by doubleHit,freq,cluster" 5p13 alanine-glyoxylate aminotransferase 2 3992 rs180749 AGXT2 64902 5 35069362 NM_031900 NP_114106 A/G T212I plus 23986266 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.21 123 "by doubleHit,freq,cluster" 5p13 alanine-glyoxylate aminotransferase 2 3993 rs181206 IL27 246778 16 28420904 NM_145659 NP_663634 C/T L119P minus 617395 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.13 87 by freq 16p11 interleukin 27 3994 rs181206 IL27 246778 16 28420904 NM_145659 NP_663634 C/T L119P minus 617395 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.04 87 by freq 16p11 interleukin 27 3995 rs181206 IL27 246778 16 28420904 NM_145659 NP_663634 C/T L119P minus 617395 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.29 87 by freq 16p11 interleukin 27 3996 rs181206 IL27 246778 16 28420904 NM_145659 NP_663634 C/T L119P minus 617395 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 92 0.3 87 by freq 16p11 interleukin 27 3997 rs181206 IL27 246778 16 28420904 NM_145659 NP_663634 C/T L119P minus 1971619 1303 SEQUENOM CEPH CEPH (92) 92 0.43 87 by freq 16p11 interleukin 27 3998 rs181231 OR4D1 26689 17 53552689 XM_292627 XP_292627 C/T P15S plus 1748198 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.25 123 "HapMap,submitter,freq,cluster" 17q23.2 "olfactory receptor, family 4, subfamily D, member 1" 3999 rs181231 OR4D1 26689 17 53552689 XM_292627 XP_292627 C/T P15S plus 23631198 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 "HapMap,submitter,freq,cluster" 17q23.2 "olfactory receptor, family 4, subfamily D, member 1" 4000 rs181231 OR4D1 26689 17 53552689 XM_292627 XP_292627 C/T P15S plus 23631198 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.28 123 "HapMap,submitter,freq,cluster" 17q23.2 "olfactory receptor, family 4, subfamily D, member 1" 4001 rs181231 OR4D1 26689 17 53552689 XM_292627 XP_292627 C/T P15S plus 23631198 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.06 123 "HapMap,submitter,freq,cluster" 17q23.2 "olfactory receptor, family 4, subfamily D, member 1" 4002 rs185819 TNXB 7148 6 32158045 NM_019105 NP_061978 C/T H1248R plus 80760 638 TSC-CSHL TSC_42_AA TSC African American (42) 83 0.31 123 "by doubleHit,freq,cluster" 6p21.3 tenascin XB 4003 rs185819 TNXB 7148 6 32158045 NM_019105 NP_061978 C/T H1248R plus 80760 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 83 0.13 123 "by doubleHit,freq,cluster" 6p21.3 tenascin XB 4004 rs185819 TNXB 7148 6 32158045 NM_019105 NP_061978 C/T H1248R plus 80760 640 TSC-CSHL TSC_42_A TSC Asian (42) 83 0.39 123 "by doubleHit,freq,cluster" 6p21.3 tenascin XB 4005 rs185819 TNXB 7148 6 32158045 NM_019105 NP_061978 C/T H1248R plus 7852581 1303 SEQUENOM CEPH CEPH (92) 92 0.38 123 "by doubleHit,freq,cluster" 6p21.3 tenascin XB 4006 rs185819 TNXB 7148 6 32158045 NM_019105 NP_061978 C/T H1248R plus 24308158 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.44 123 "by doubleHit,freq,cluster" 6p21.3 tenascin XB 4007 rs185819 TNXB 7148 6 32158045 NM_019105 NP_061978 C/T H1248R plus 24308158 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.43 123 "by doubleHit,freq,cluster" 6p21.3 tenascin XB 4008 rs185819 TNXB 7148 6 32158045 NM_019105 NP_061978 C/T H1248R plus 24308158 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.42 123 "by doubleHit,freq,cluster" 6p21.3 tenascin XB 4009 rs187316 MIDORI 57538 15 83206999 NM_020778 NP_065829 C/T L1622P plus 577733 1303 SEQUENOM CEPH CEPH (92) 92 0.09 121 "by doubleHit,freq" 15q25.2 likely ortholog of mouse myocytic induction/differentiation originator 4010 rs188096 SLC10A2 6555 13 102503045 NM_000452 NP_000443 A/C S171A plus 3210569 738 YUSUKE JBIC-ALLELE Japanese (752) 1494 0.29 123 "by submitter,freq,cluster" 13q33 "solute carrier family 10 (sodium/bile acid cotransporter family), member 2" 4011 rs188096 SLC10A2 6555 13 102503045 NM_000452 NP_000443 A/C S171A plus 23911692 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.21 123 "by submitter,freq,cluster" 13q33 "solute carrier family 10 (sodium/bile acid cotransporter family), member 2" 4012 rs188096 SLC10A2 6555 13 102503045 NM_000452 NP_000443 A/C S171A plus 23911692 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "by submitter,freq,cluster" 13q33 "solute carrier family 10 (sodium/bile acid cotransporter family), member 2" 4013 rs188096 SLC10A2 6555 13 102503045 NM_000452 NP_000443 A/C S171A plus 23911692 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "by submitter,freq,cluster" 13q33 "solute carrier family 10 (sodium/bile acid cotransporter family), member 2" 4014 rs188242 C15orf22 23423 15 77393338 NM_007364 NP_031390 C/T F118S plus 248976 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 80 by freq 15q24-q25 integral type I protein 4015 rs188242 C15orf22 23423 15 77393338 NM_007364 NP_031390 C/T F118S plus 248976 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 80 by freq 15q24-q25 integral type I protein 4016 rs188242 C15orf22 23423 15 77393338 NM_007364 NP_031390 C/T F118S plus 248976 640 TSC-CSHL TSC_42_A TSC Asian (42) 83 0.19 80 by freq 15q24-q25 integral type I protein 4017 rs188242 C15orf22 23423 15 77393338 NM_007364 NP_031390 C/T F118S plus 538710 1303 SEQUENOM CEPH CEPH (92) 92 1 80 by freq 15q24-q25 integral type I protein 4018 rs188703 CSPG2 1462 5 82870055 NM_004385 NP_004376 C/T R1826H minus 648869 1303 SEQUENOM CEPH CEPH (92) 92 0.44 121 "by doubleHit,submitter,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 4019 rs194134 MYOZ3 91977 5 150032151 NM_133371 NP_588612 A/G S161P minus 1997294 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.03 121 "HapMap,freq,cluster" 5q33.1 myozenin 3 4020 rs194520 STEAP2 261729 7 89499097 NM_152999 NP_694544 G/T F17C plus 256300 638 TSC-CSHL TSC_42_AA TSC African American (42) 83 0.3 79 "HapMap,freq" 7q21 six transmembrane epithelial antigen of prostate 2 4021 rs194520 STEAP2 261729 7 89499097 NM_152999 NP_694544 G/T F17C plus 256300 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 83 0.4 79 "HapMap,freq" 7q21 six transmembrane epithelial antigen of prostate 2 4022 rs194520 STEAP2 261729 7 89499097 NM_152999 NP_694544 G/T F17C plus 256300 640 TSC-CSHL TSC_42_A TSC Asian (42) 83 0.1 79 "HapMap,freq" 7q21 six transmembrane epithelial antigen of prostate 2 4023 rs194520 STEAP2 261729 7 89499097 NM_152999 NP_694544 G/T F17C plus 256300 885 TSC-CSHL HapMap-CEPH-30-trios 60 0.5 79 "HapMap,freq" 7q21 six transmembrane epithelial antigen of prostate 2 4024 rs194520 STEAP2 261729 7 89499097 NM_152999 NP_694544 G/T F17C plus 256300 1303 SEQUENOM CEPH CEPH (92) 92 1 79 "HapMap,freq" 7q21 six transmembrane epithelial antigen of prostate 2 4025 rs194524 STEAP2 261729 7 89506483 NM_152999 NP_694544 A/G R456Q plus 256305 885 TSC-CSHL HapMap-CEPH-30-trios 60 0.5 123 "HapMap,freq" 7q21 six transmembrane epithelial antigen of prostate 2 4026 rs194524 STEAP2 261729 7 89506483 NM_152999 NP_694544 A/G R456Q plus 24680669 1371 PERLEGEN AFD_EUR_PANEL European American (24) 24 0.5 123 "HapMap,freq" 7q21 six transmembrane epithelial antigen of prostate 2 4027 rs194524 STEAP2 261729 7 89506483 NM_152999 NP_694544 A/G R456Q plus 24680669 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.34 123 "HapMap,freq" 7q21 six transmembrane epithelial antigen of prostate 2 4028 rs194524 STEAP2 261729 7 89506483 NM_152999 NP_694544 A/G R456Q plus 24680669 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.23 123 "HapMap,freq" 7q21 six transmembrane epithelial antigen of prostate 2 4029 rs194525 STEAP2 261729 7 89506541 NM_152999 NP_694544 G/T M475I plus 14567838 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.13 121 "HapMap,doubleHit,freq,cluster" 7q21 six transmembrane epithelial antigen of prostate 2 4030 rs194998 CDH26 60437 20 58004459 NM_177980 NP_817089 G/T V615L plus 8331628 1303 SEQUENOM CEPH CEPH (92) 92 1 114 by doubleHit 20q13.2-q13.33 cadherin-like 26 4031 rs196864 NEF3 4741 8 24830588 NM_005382 NP_005373 G/T P439T minus 1942340 1303 SEQUENOM CEPH CEPH (92) 92 0.05 123 "by submitter,freq,cluster" 8p21 neurofilament 3 (150kDa medium) 4032 rs196864 NEF3 4741 8 24830588 NM_005382 NP_005373 G/T P439T minus 23809172 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.11 123 "by submitter,freq,cluster" 8p21 neurofilament 3 (150kDa medium) 4033 rs196864 NEF3 4741 8 24830588 NM_005382 NP_005373 G/T P439T minus 23809172 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.17 123 "by submitter,freq,cluster" 8p21 neurofilament 3 (150kDa medium) 4034 rs196864 NEF3 4741 8 24830588 NM_005382 NP_005373 G/T P439T minus 23809172 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by submitter,freq,cluster" 8p21 neurofilament 3 (150kDa medium) 4035 rs197367 ANLN 54443 7 36219096 NM_018685 NP_061155 A/G R185K plus 2062729 885 TSC-CSHL HapMap-CEPH-30-trios 110 0.37 123 "HapMap,freq,cluster" 7p15-p14 "anillin, actin binding protein (scraps homolog, Drosophila)" 4036 rs197367 ANLN 54443 7 36219096 NM_018685 NP_061155 A/G R185K plus 2062729 1303 SEQUENOM CEPH CEPH (92) 92 0.47 123 "HapMap,freq,cluster" 7p15-p14 "anillin, actin binding protein (scraps homolog, Drosophila)" 4037 rs197367 ANLN 54443 7 36219096 NM_018685 NP_061155 A/G R185K plus 4921397 738 YUSUKE JBIC-ALLELE Japanese (752) 1466 0.27 123 "HapMap,freq,cluster" 7p15-p14 "anillin, actin binding protein (scraps homolog, Drosophila)" 4038 rs197367 ANLN 54443 7 36219096 NM_018685 NP_061155 A/G R185K plus 24421526 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.48 123 "HapMap,freq,cluster" 7p15-p14 "anillin, actin binding protein (scraps homolog, Drosophila)" 4039 rs197367 ANLN 54443 7 36219096 NM_018685 NP_061155 A/G R185K plus 24421526 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.38 123 "HapMap,freq,cluster" 7p15-p14 "anillin, actin binding protein (scraps homolog, Drosophila)" 4040 rs197367 ANLN 54443 7 36219096 NM_018685 NP_061155 A/G R185K plus 24421526 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.26 123 "HapMap,freq,cluster" 7p15-p14 "anillin, actin binding protein (scraps homolog, Drosophila)" 4041 rs197412 DDX20 11218 1 112020995 NM_007204 NP_009135 C/T I636T plus 2763150 1303 SEQUENOM CEPH CEPH (92) 92 0.1 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4042 rs197412 DDX20 11218 1 112020995 NM_007204 NP_009135 C/T I636T plus 24261604 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.46 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4043 rs197412 DDX20 11218 1 112020995 NM_007204 NP_009135 C/T I636T plus 24261604 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.31 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4044 rs197412 DDX20 11218 1 112020995 NM_007204 NP_009135 C/T I636T plus 24261604 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.33 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4045 rs197414 DDX20 11218 1 112021165 NM_007204 NP_009135 A/C R693S plus 91720 901 AFFY AfAm 4 1 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4046 rs197414 DDX20 11218 1 112021165 NM_007204 NP_009135 A/C R693S plus 91720 902 AFFY Caucasian 24 0.08 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4047 rs197414 DDX20 11218 1 112021165 NM_007204 NP_009135 A/C R693S plus 91720 903 AFFY Asian 12 1 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4048 rs197414 DDX20 11218 1 112021165 NM_007204 NP_009135 A/C R693S plus 91720 904 AFFY CEPH 10 1 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4049 rs197414 DDX20 11218 1 112021165 NM_007204 NP_009135 A/C R693S plus 91720 905 AFFY PDpanel 42 0.07 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4050 rs197414 DDX20 11218 1 112021165 NM_007204 NP_009135 A/C R693S plus 91720 1303 SEQUENOM CEPH CEPH (92) 92 0.04 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4051 rs197414 DDX20 11218 1 112021165 NM_007204 NP_009135 A/C R693S plus 838426 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 1 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4052 rs197414 DDX20 11218 1 112021165 NM_007204 NP_009135 A/C R693S plus 838426 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 10 0.5 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4053 rs197414 DDX20 11218 1 112021165 NM_007204 NP_009135 A/C R693S plus 838426 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.14 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4054 rs197414 DDX20 11218 1 112021165 NM_007204 NP_009135 A/C R693S plus 838426 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.15 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4055 rs197414 DDX20 11218 1 112021165 NM_007204 NP_009135 A/C R693S plus 23183317 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.19 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4056 rs197414 DDX20 11218 1 112021165 NM_007204 NP_009135 A/C R693S plus 23183317 1372 PERLEGEN AFD_AFR_PANEL African American (24) 40 0.43 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4057 rs197414 DDX20 11218 1 112021165 NM_007204 NP_009135 A/C R693S plus 23183317 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by doubleHit,freq,cluster" 1p21.1-p13.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 4058 rs197922 GOSR2 9570 17 42363569 NM_004287 NP_004278 A/G R67K plus 260454 771 TSC-CSHL SC_12_A CORIELL Asian (12) 18 0.22 123 "by doubleHit,submitter,freq,cluster" 17q21 golgi SNAP receptor complex member 2 4059 rs197922 GOSR2 9570 17 42363569 NM_004287 NP_004278 A/G R67K plus 260454 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 16 0.44 123 "by doubleHit,submitter,freq,cluster" 17q21 golgi SNAP receptor complex member 2 4060 rs197922 GOSR2 9570 17 42363569 NM_004287 NP_004278 A/G R67K plus 260454 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 12 0.33 123 "by doubleHit,submitter,freq,cluster" 17q21 golgi SNAP receptor complex member 2 4061 rs197922 GOSR2 9570 17 42363569 NM_004287 NP_004278 A/G R67K plus 1832058 1303 SEQUENOM CEPH CEPH (92) 92 0.42 123 "by doubleHit,submitter,freq,cluster" 17q21 golgi SNAP receptor complex member 2 4062 rs197922 GOSR2 9570 17 42363569 NM_004287 NP_004278 A/G R67K plus 24111289 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "by doubleHit,submitter,freq,cluster" 17q21 golgi SNAP receptor complex member 2 4063 rs197922 GOSR2 9570 17 42363569 NM_004287 NP_004278 A/G R67K plus 24111289 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.35 123 "by doubleHit,submitter,freq,cluster" 17q21 golgi SNAP receptor complex member 2 4064 rs197922 GOSR2 9570 17 42363569 NM_004287 NP_004278 A/G R67K plus 24111289 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "by doubleHit,submitter,freq,cluster" 17q21 golgi SNAP receptor complex member 2 4065 rs197922 GOSR2 9570 17 42363569 NM_054022 NP_473363 A/G R67K plus 260454 771 TSC-CSHL SC_12_A CORIELL Asian (12) 18 0.22 123 "by doubleHit,submitter,freq,cluster" 17q21 golgi SNAP receptor complex member 2 4066 rs197922 GOSR2 9570 17 42363569 NM_054022 NP_473363 A/G R67K plus 260454 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 16 0.44 123 "by doubleHit,submitter,freq,cluster" 17q21 golgi SNAP receptor complex member 2 4067 rs197922 GOSR2 9570 17 42363569 NM_054022 NP_473363 A/G R67K plus 260454 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 12 0.33 123 "by doubleHit,submitter,freq,cluster" 17q21 golgi SNAP receptor complex member 2 4068 rs197922 GOSR2 9570 17 42363569 NM_054022 NP_473363 A/G R67K plus 1832058 1303 SEQUENOM CEPH CEPH (92) 92 0.42 123 "by doubleHit,submitter,freq,cluster" 17q21 golgi SNAP receptor complex member 2 4069 rs197922 GOSR2 9570 17 42363569 NM_054022 NP_473363 A/G R67K plus 24111289 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "by doubleHit,submitter,freq,cluster" 17q21 golgi SNAP receptor complex member 2 4070 rs197922 GOSR2 9570 17 42363569 NM_054022 NP_473363 A/G R67K plus 24111289 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.35 123 "by doubleHit,submitter,freq,cluster" 17q21 golgi SNAP receptor complex member 2 4071 rs197922 GOSR2 9570 17 42363569 NM_054022 NP_473363 A/G R67K plus 24111289 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "by doubleHit,submitter,freq,cluster" 17q21 golgi SNAP receptor complex member 2 4072 rs198915 KRTAP22-1 337979 21 30895387 NM_181620 NP_853651 A/T L26H minus 67631 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.07 123 "by doubleHit,submitter,freq,cluster" 21q22.1 keratin associated protein 22-1 4073 rs198915 KRTAP22-1 337979 21 30895387 NM_181620 NP_853651 A/T L26H minus 24101884 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.21 123 "by doubleHit,submitter,freq,cluster" 21q22.1 keratin associated protein 22-1 4074 rs198915 KRTAP22-1 337979 21 30895387 NM_181620 NP_853651 A/T L26H minus 24101884 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "by doubleHit,submitter,freq,cluster" 21q22.1 keratin associated protein 22-1 4075 rs198915 KRTAP22-1 337979 21 30895387 NM_181620 NP_853651 A/T L26H minus 24101884 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "by doubleHit,submitter,freq,cluster" 21q22.1 keratin associated protein 22-1 4076 rs198977 KLK2 3817 19 56073589 NM_005551 NP_005542 C/T R250W plus 2041639 1303 SEQUENOM CEPH CEPH (92) 92 0.24 106 "by cluster,freq" 19q13.41 "kallikrein 2, prostatic" 4077 rs198977 KLK2 3817 19 56073589 NM_005551 NP_005542 C/T R250W plus 3234945 738 YUSUKE JBIC-ALLELE Japanese (752) 1498 0.25 106 "by cluster,freq" 19q13.41 "kallikrein 2, prostatic" 4078 rs200454 DNAJC11 55735 1 6640140 NM_018198 NP_060668 C/G T290S plus 5234802 1303 SEQUENOM CEPH CEPH (92) 92 0.16 110 "by doubleHit,freq" 1p36.23 "DnaJ (Hsp40) homolog, subfamily C, member 11" 4079 rs200484 HIST1H2BL 8340 6 27883653 NM_003519 NP_003510 A/G L4P plus 858400 1303 SEQUENOM CEPH CEPH (92) 92 0.22 123 "by doubleHit,freq" 6p22-p21.3 "histone 1, H2bl" 4080 rs202676 FOLH1 2346 11 49184196 NM_004476 NP_004467 C/T Y75H minus 605502 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.33 123 "by doubleHit,freq,cluster" 11p11.2 folate hydrolase (prostate-specific membrane antigen) 1 4081 rs202676 FOLH1 2346 11 49184196 NM_004476 NP_004467 C/T Y75H minus 605502 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.42 123 "by doubleHit,freq,cluster" 11p11.2 folate hydrolase (prostate-specific membrane antigen) 1 4082 rs202676 FOLH1 2346 11 49184196 NM_004476 NP_004467 C/T Y75H minus 605502 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.14 123 "by doubleHit,freq,cluster" 11p11.2 folate hydrolase (prostate-specific membrane antigen) 1 4083 rs202676 FOLH1 2346 11 49184196 NM_004476 NP_004467 C/T Y75H minus 23739871 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.21 123 "by doubleHit,freq,cluster" 11p11.2 folate hydrolase (prostate-specific membrane antigen) 1 4084 rs202676 FOLH1 2346 11 49184196 NM_004476 NP_004467 C/T Y75H minus 23739871 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "by doubleHit,freq,cluster" 11p11.2 folate hydrolase (prostate-specific membrane antigen) 1 4085 rs202676 FOLH1 2346 11 49184196 NM_004476 NP_004467 C/T Y75H minus 23739871 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.35 123 "by doubleHit,freq,cluster" 11p11.2 folate hydrolase (prostate-specific membrane antigen) 1 4086 rs203462 AKAP10 11216 17 19753133 NM_007202 NP_009133 A/G I646V minus 266958 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.17 123 "HapMap,doubleHit,submitter,freq,cluster" 17p11.1 A kinase (PRKA) anchor protein 10 4087 rs203462 AKAP10 11216 17 19753133 NM_007202 NP_009133 A/G I646V minus 266958 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.29 123 "HapMap,doubleHit,submitter,freq,cluster" 17p11.1 A kinase (PRKA) anchor protein 10 4088 rs203462 AKAP10 11216 17 19753133 NM_007202 NP_009133 A/G I646V minus 266958 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.07 123 "HapMap,doubleHit,submitter,freq,cluster" 17p11.1 A kinase (PRKA) anchor protein 10 4089 rs203462 AKAP10 11216 17 19753133 NM_007202 NP_009133 A/G I646V minus 1647656 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.41 123 "HapMap,doubleHit,submitter,freq,cluster" 17p11.1 A kinase (PRKA) anchor protein 10 4090 rs203462 AKAP10 11216 17 19753133 NM_007202 NP_009133 A/G I646V minus 1647656 1303 SEQUENOM CEPH CEPH (92) 46 0.5 123 "HapMap,doubleHit,submitter,freq,cluster" 17p11.1 A kinase (PRKA) anchor protein 10 4091 rs203462 AKAP10 11216 17 19753133 NM_007202 NP_009133 A/G I646V minus 24590791 1371 PERLEGEN AFD_EUR_PANEL European American (24) 24 0.5 123 "HapMap,doubleHit,submitter,freq,cluster" 17p11.1 A kinase (PRKA) anchor protein 10 4092 rs203462 AKAP10 11216 17 19753133 NM_007202 NP_009133 A/G I646V minus 24590791 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.43 123 "HapMap,doubleHit,submitter,freq,cluster" 17p11.1 A kinase (PRKA) anchor protein 10 4093 rs203462 AKAP10 11216 17 19753133 NM_007202 NP_009133 A/G I646V minus 24590791 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.15 123 "HapMap,doubleHit,submitter,freq,cluster" 17p11.1 A kinase (PRKA) anchor protein 10 4094 rs203710 PVR 5817 19 49853878 NM_006505 NP_006496 A/G I340M plus 484460 771 TSC-CSHL SC_12_A CORIELL Asian (12) 22 1 121 "HapMap,freq,cluster" 19q13.2 poliovirus receptor 4095 rs203710 PVR 5817 19 49853878 NM_006505 NP_006496 A/G I340M plus 484460 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 18 1 121 "HapMap,freq,cluster" 19q13.2 poliovirus receptor 4096 rs203710 PVR 5817 19 49853878 NM_006505 NP_006496 A/G I340M plus 484460 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.07 121 "HapMap,freq,cluster" 19q13.2 poliovirus receptor 4097 rs203710 PVR 5817 19 49853878 NM_006505 NP_006496 A/G I340M plus 484460 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.02 121 "HapMap,freq,cluster" 19q13.2 poliovirus receptor 4098 rs203710 PVR 5817 19 49853878 NM_006505 NP_006496 A/G I340M plus 1821115 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.02 121 "HapMap,freq,cluster" 19q13.2 poliovirus receptor 4099 rs204896 TNXB 7148 6 32172076 NM_019105 NP_061978 C/T R511H plus 661712 1303 SEQUENOM CEPH CEPH (92) 92 0.07 123 "by cluster,freq" 6p21.3 tenascin XB 4100 rs204896 TNXB 7148 6 32172076 NM_019105 NP_061978 C/T R511H plus 3195000 738 YUSUKE JBIC-ALLELE Japanese (752) 1492 0.11 123 "by cluster,freq" 6p21.3 tenascin XB 4101 rs204896 TNXB 7148 6 32172076 NM_019105 NP_061978 C/T R511H plus 23714822 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.08 123 "by cluster,freq" 6p21.3 tenascin XB 4102 rs204896 TNXB 7148 6 32172076 NM_019105 NP_061978 C/T R511H plus 23714822 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.17 123 "by cluster,freq" 6p21.3 tenascin XB 4103 rs204896 TNXB 7148 6 32172076 NM_019105 NP_061978 C/T R511H plus 23714822 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.06 123 "by cluster,freq" 6p21.3 tenascin XB 4104 rs204900 TNXB 7148 6 32164558 NM_019105 NP_061978 G/T S873A minus 268677 638 TSC-CSHL TSC_42_AA TSC African American (42) 83 0.18 121 "by doubleHit,freq,cluster" 6p21.3 tenascin XB 4105 rs204900 TNXB 7148 6 32164558 NM_019105 NP_061978 G/T S873A minus 268677 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 83 0.06 121 "by doubleHit,freq,cluster" 6p21.3 tenascin XB 4106 rs204900 TNXB 7148 6 32164558 NM_019105 NP_061978 G/T S873A minus 268677 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 121 "by doubleHit,freq,cluster" 6p21.3 tenascin XB 4107 rs204900 TNXB 7148 6 32164558 NM_019105 NP_061978 G/T S873A minus 466452 1303 SEQUENOM CEPH CEPH (92) 92 0.16 121 "by doubleHit,freq,cluster" 6p21.3 tenascin XB 4108 rs205498 TRIM25 7706 17 52333793 NM_005082 NP_005073 C/T P358L minus 1830958 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.28 121 "HapMap,doubleHit,freq,cluster" 17q23.1 tripartite motif-containing 25 4109 rs205498 TRIM25 7706 17 52333793 NM_005082 NP_005073 C/T P358L minus 3247929 738 YUSUKE JBIC-ALLELE Japanese (752) 1490 0.2 121 "HapMap,doubleHit,freq,cluster" 17q23.1 tripartite motif-containing 25 4110 rs208294 P2RX7 5027 12 120062973 NM_002562 NP_002553 A/G Y155H minus 2985837 738 YUSUKE JBIC-ALLELE Japanese (752) 734 0.46 120 "by doubleHit,cluster" 12q24 "purinergic receptor P2X, ligand-gated ion channel, 7" 4111 rs208696 SASH1 23328 6 148906950 NM_015278 NP_056093 A/G Q884R plus 4920175 738 YUSUKE JBIC-ALLELE Japanese (752) 1492 0.4 123 "by doubleHit,freq,cluster" 6q24.3 SAM and SH3 domain containing 1 4112 rs208696 SASH1 23328 6 148906950 NM_015278 NP_056093 A/G Q884R plus 5221682 1303 SEQUENOM CEPH CEPH (92) 92 0.01 123 "by doubleHit,freq,cluster" 6q24.3 SAM and SH3 domain containing 1 4113 rs208696 SASH1 23328 6 148906950 NM_015278 NP_056093 A/G Q884R plus 24484549 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.44 123 "by doubleHit,freq,cluster" 6q24.3 SAM and SH3 domain containing 1 4114 rs208696 SASH1 23328 6 148906950 NM_015278 NP_056093 A/G Q884R plus 24484549 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.17 123 "by doubleHit,freq,cluster" 6q24.3 SAM and SH3 domain containing 1 4115 rs208696 SASH1 23328 6 148906950 NM_015278 NP_056093 A/G Q884R plus 24484549 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.25 123 "by doubleHit,freq,cluster" 6q24.3 SAM and SH3 domain containing 1 4116 rs208753 PCM1 5108 8 17859195 NM_006197 NP_006188 A/G M597V plus 1846412 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.26 123 "HapMap,submitter,freq,cluster" 8p22-p21.3 pericentriolar material 1 4117 rs208753 PCM1 5108 8 17859195 NM_006197 NP_006188 A/G M597V plus 1846412 1303 SEQUENOM CEPH CEPH (92) 92 0.26 123 "HapMap,submitter,freq,cluster" 8p22-p21.3 pericentriolar material 1 4118 rs208753 PCM1 5108 8 17859195 NM_006197 NP_006188 A/G M597V plus 3213878 738 YUSUKE JBIC-ALLELE Japanese (752) 1464 0.3 123 "HapMap,submitter,freq,cluster" 8p22-p21.3 pericentriolar material 1 4119 rs208753 PCM1 5108 8 17859195 NM_006197 NP_006188 A/G M597V plus 24664200 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.25 123 "HapMap,submitter,freq,cluster" 8p22-p21.3 pericentriolar material 1 4120 rs208753 PCM1 5108 8 17859195 NM_006197 NP_006188 A/G M597V plus 24664200 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "HapMap,submitter,freq,cluster" 8p22-p21.3 pericentriolar material 1 4121 rs208753 PCM1 5108 8 17859195 NM_006197 NP_006188 A/G M597V plus 24664200 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.25 123 "HapMap,submitter,freq,cluster" 8p22-p21.3 pericentriolar material 1 4122 rs210280 ZNF11B 7558 10 42409971 NM_006955 NP_008886 A/G R145C plus 2677121 1303 SEQUENOM CEPH CEPH (92) 92 0.26 122 "by doubleHit,freq,cluster" 10q11.2 zinc finger protein 11b (KOX 2) 4123 rs210968 ROS1 6098 6 117728843 NM_002944 NP_002935 A/C N2240K plus 537765 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by doubleHit,freq,cluster" 6q22 v-ros UR2 sarcoma virus oncogene homolog 1 (avian) 4124 rs210968 ROS1 6098 6 117728843 NM_002944 NP_002935 A/C N2240K plus 23337523 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by doubleHit,freq,cluster" 6q22 v-ros UR2 sarcoma virus oncogene homolog 1 (avian) 4125 rs210968 ROS1 6098 6 117728843 NM_002944 NP_002935 A/C N2240K plus 23337523 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "by doubleHit,freq,cluster" 6q22 v-ros UR2 sarcoma virus oncogene homolog 1 (avian) 4126 rs210968 ROS1 6098 6 117728843 NM_002944 NP_002935 A/C N2240K plus 23337523 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.02 123 "by doubleHit,freq,cluster" 6q22 v-ros UR2 sarcoma virus oncogene homolog 1 (avian) 4127 rs212989 SLC5A9 200010 1 48407101 XM_117174 XP_117174 A/G V152M plus 3309457 1303 SEQUENOM CEPH CEPH (92) 92 0.2 111 "by doubleHit,freq" 1p33 "solute carrier family 5 (sodium/glucose cotransporter), member 9" 4128 rs213950 CFTR 1080 7 116793484 NM_000492 NP_000483 A/G V470M plus 24012792 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.44 123 "by doubleHit,submitter,freq,cluster" 7q31.2 "cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7)" 4129 rs213950 CFTR 1080 7 116793484 NM_000492 NP_000483 A/G V470M plus 24012792 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.11 123 "by doubleHit,submitter,freq,cluster" 7q31.2 "cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7)" 4130 rs213950 CFTR 1080 7 116793484 NM_000492 NP_000483 A/G V470M plus 24012792 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 7q31.2 "cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7)" 4131 rs214950 SYNE1 23345 6 152800424 NM_033071 NP_149062 A/G A2802V plus 1721389 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.2 121 "HapMap,doubleHit,freq" 6q25 "spectrin repeat containing, nuclear envelope 1" 4132 rs214950 SYNE1 23345 6 152800424 NM_033071 NP_149062 A/G A2802V plus 1721389 1303 SEQUENOM CEPH CEPH (92) 92 0.27 121 "HapMap,doubleHit,freq" 6q25 "spectrin repeat containing, nuclear envelope 1" 4133 rs214950 SYNE1 23345 6 152800424 NM_182961 NP_892006 A/G A2795V plus 1721389 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.2 121 "HapMap,doubleHit,freq" 6q25 "spectrin repeat containing, nuclear envelope 1" 4134 rs214950 SYNE1 23345 6 152800424 NM_182961 NP_892006 A/G A2795V plus 1721389 1303 SEQUENOM CEPH CEPH (92) 92 0.27 121 "HapMap,doubleHit,freq" 6q25 "spectrin repeat containing, nuclear envelope 1" 4135 rs214976 SYNE1 23345 6 152864378 NM_033071 NP_149062 C/T V1042A minus 701378 1303 SEQUENOM CEPH CEPH (92) 92 0.28 119 "by doubleHit,submitter,freq,cluster" 6q25 "spectrin repeat containing, nuclear envelope 1" 4136 rs214976 SYNE1 23345 6 152864378 NM_182961 NP_892006 C/T V1035A minus 701378 1303 SEQUENOM CEPH CEPH (92) 92 0.28 119 "by doubleHit,submitter,freq,cluster" 6q25 "spectrin repeat containing, nuclear envelope 1" 4137 rs216321 VWF 7450 12 6014245 NM_000552 NP_000543 C/T Q852R plus 667776 1303 SEQUENOM CEPH CEPH (92) 92 0.05 123 "by submitter,freq,cluster" 12p13.3 von Willebrand factor 4138 rs216321 VWF 7450 12 6014245 NM_000552 NP_000543 C/T Q852R plus 3194293 738 YUSUKE JBIC-ALLELE Japanese (752) 1496 0.19 123 "by submitter,freq,cluster" 12p13.3 von Willebrand factor 4139 rs216321 VWF 7450 12 6014245 NM_000552 NP_000543 C/T Q852R plus 24166811 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.1 123 "by submitter,freq,cluster" 12p13.3 von Willebrand factor 4140 rs216321 VWF 7450 12 6014245 NM_000552 NP_000543 C/T Q852R plus 24166811 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "by submitter,freq,cluster" 12p13.3 von Willebrand factor 4141 rs216321 VWF 7450 12 6014245 NM_000552 NP_000543 C/T Q852R plus 24166811 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.17 123 "by submitter,freq,cluster" 12p13.3 von Willebrand factor 4142 rs217086 CTSC 1075 11 87685231 NM_001814 NP_001805 A/G I153T plus 745848 771 TSC-CSHL SC_12_A CORIELL Asian (12) 18 1 123 "by doubleHit,freq,cluster" 11q14.1-q14.3 cathepsin C 4143 rs217086 CTSC 1075 11 87685231 NM_001814 NP_001805 A/G I153T plus 745848 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 20 0.35 123 "by doubleHit,freq,cluster" 11q14.1-q14.3 cathepsin C 4144 rs217086 CTSC 1075 11 87685231 NM_001814 NP_001805 A/G I153T plus 745848 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 10 0.4 123 "by doubleHit,freq,cluster" 11q14.1-q14.3 cathepsin C 4145 rs217086 CTSC 1075 11 87685231 NM_001814 NP_001805 A/G I153T plus 23377436 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.13 123 "by doubleHit,freq,cluster" 11q14.1-q14.3 cathepsin C 4146 rs217086 CTSC 1075 11 87685231 NM_001814 NP_001805 A/G I153T plus 23377436 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.2 123 "by doubleHit,freq,cluster" 11q14.1-q14.3 cathepsin C 4147 rs217086 CTSC 1075 11 87685231 NM_001814 NP_001805 A/G I153T plus 23377436 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by doubleHit,freq,cluster" 11q14.1-q14.3 cathepsin C 4148 rs217180 PMFBP1 83449 16 70742130 NM_031293 NP_112583 A/G A172T minus 3288372 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.08 123 "HapMap,submitter,freq" 16q22.2 polyamine modulated factor 1 binding protein 1 4149 rs217180 PMFBP1 83449 16 70742130 NM_031293 NP_112583 A/G A172T minus 3288372 1303 SEQUENOM CEPH CEPH (92) 92 0.25 123 "HapMap,submitter,freq" 16q22.2 polyamine modulated factor 1 binding protein 1 4150 rs217180 PMFBP1 83449 16 70742130 NM_031293 NP_112583 A/G A172T minus 24576958 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 "HapMap,submitter,freq" 16q22.2 polyamine modulated factor 1 binding protein 1 4151 rs217180 PMFBP1 83449 16 70742130 NM_031293 NP_112583 A/G A172T minus 24576958 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "HapMap,submitter,freq" 16q22.2 polyamine modulated factor 1 binding protein 1 4152 rs217180 PMFBP1 83449 16 70742130 NM_031293 NP_112583 A/G A172T minus 24576958 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.15 123 "HapMap,submitter,freq" 16q22.2 polyamine modulated factor 1 binding protein 1 4153 rs218966 PHF14 9678 7 10795470 XM_376578 XP_376578 C/T K115R minus 4933830 738 YUSUKE JBIC-ALLELE Japanese (752) 1476 0.44 121 "by doubleHit,freq,cluster" 7p21.3 PHD finger protein 14 4154 rs220159 UMODL1 89766 21 42420942 NM_173568 NP_775839 C/T D162N minus 24605138 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.42 123 "by doubleHit,freq,cluster" 21q22.3 uromodulin-like 1 4155 rs220159 UMODL1 89766 21 42420942 NM_173568 NP_775839 C/T D162N minus 24605138 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.32 123 "by doubleHit,freq,cluster" 21q22.3 uromodulin-like 1 4156 rs220159 UMODL1 89766 21 42420942 NM_173568 NP_775839 C/T D162N minus 24605138 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "by doubleHit,freq,cluster" 21q22.3 uromodulin-like 1 4157 rs220379 ZNF263 10127 16 3279436 NM_005741 NP_005732 C/G C310S plus 595513 1303 SEQUENOM CEPH CEPH (92) 92 0.42 116 "by doubleHit,freq,cluster" 16p13.3 zinc finger protein 263 4158 rs220461 GSG2 83903 17 3574961 NM_031965 NP_114171 A/G I328T minus 1629759 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.27 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13 haspin 4159 rs220461 GSG2 83903 17 3574961 NM_031965 NP_114171 A/G I328T minus 1629759 1303 SEQUENOM CEPH CEPH (92) 92 0.19 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13 haspin 4160 rs220461 GSG2 83903 17 3574961 NM_031965 NP_114171 A/G I328T minus 4996209 1072 RIKENSNPRC JBIC-ALLELE Japanese (752) 1498 0.38 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13 haspin 4161 rs220461 GSG2 83903 17 3574961 NM_031965 NP_114171 A/G I328T minus 24443575 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13 haspin 4162 rs220461 GSG2 83903 17 3574961 NM_031965 NP_114171 A/G I328T minus 24443575 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13 haspin 4163 rs220461 GSG2 83903 17 3574961 NM_031965 NP_114171 A/G I328T minus 24443575 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.29 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13 haspin 4164 rs220462 GSG2 83903 17 3574589 NM_031965 NP_114171 C/T G204D minus 1629760 1303 SEQUENOM CEPH CEPH (92) 92 0.46 121 "by doubleHit,freq" 17p13 haspin 4165 rs220479 ITGAE 3682 17 3603924 NM_002208 NP_002199 A/G I477V minus 21431179 1303 SEQUENOM CEPH CEPH (92) 92 0.29 121 "by cluster,freq" 17p13 "integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)" 4166 rs221057 ARHGEF19 128272 1 16279561 NM_153213 NP_694945 C/G E238Q plus 467920 1303 SEQUENOM CEPH CEPH (92) 92 0.37 119 "by doubleHit,freq,cluster" 1p36.13 Rho guanine nucleotide exchange factor (GEF) 19 4167 rs221058 ARHGEF19 128272 1 16279952 NM_153213 NP_694945 C/G G163R plus 465474 1303 SEQUENOM CEPH CEPH (92) 92 0.25 119 "by doubleHit,freq" 1p36.13 Rho guanine nucleotide exchange factor (GEF) 19 4168 rs223124 ZFHX2 85446 14 23062582 XM_033370 XP_033370 G/T S1087R plus 1873093 1303 SEQUENOM CEPH CEPH (92) 92 0.18 108 "by cluster,freq" 14q11.2 zinc finger homeobox 2 4169 rs224222 MEFV 4210 16 3244464 NM_000243 NP_000234 A/G R202Q minus 508456 1303 SEQUENOM CEPH CEPH (92) 92 0.41 120 "by cluster,freq" 16p13.3 Mediterranean fever 4170 rs224222 MEFV 4210 16 3244464 NM_000243 NP_000234 A/G R202Q minus 15356115 846 IIPGA-WEISS-MARTINEZ D-0 CORIELL African-American 48 0.08 120 "by cluster,freq" 16p13.3 Mediterranean fever 4171 rs224222 MEFV 4210 16 3244464 NM_000243 NP_000234 A/G R202Q minus 15356115 847 IIPGA-WEISS-MARTINEZ E-0 CEPH 40 0.3 120 "by cluster,freq" 16p13.3 Mediterranean fever 4172 rs224222 MEFV 4210 16 3244464 NM_000243 NP_000234 A/G R202Q minus 15356115 848 IIPGA-WEISS-MARTINEZ E-1 CEPH 6 0.17 120 "by cluster,freq" 16p13.3 Mediterranean fever 4173 rs224331 GDF5 8200 20 33485801 NM_000557 NP_000548 A/C S276A plus 8375421 1303 SEQUENOM CEPH CEPH (92) 92 0.37 123 "by doubleHit,freq,cluster" 20q11.2 growth differentiation factor 5 (cartilage-derived morphogenetic protein-1) 4174 rs224331 GDF5 8200 20 33485801 NM_000557 NP_000548 A/C S276A plus 23566430 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.37 123 "by doubleHit,freq,cluster" 20q11.2 growth differentiation factor 5 (cartilage-derived morphogenetic protein-1) 4175 rs224331 GDF5 8200 20 33485801 NM_000557 NP_000548 A/C S276A plus 23566430 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "by doubleHit,freq,cluster" 20q11.2 growth differentiation factor 5 (cartilage-derived morphogenetic protein-1) 4176 rs224331 GDF5 8200 20 33485801 NM_000557 NP_000548 A/C S276A plus 23566430 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.24 123 "by doubleHit,freq,cluster" 20q11.2 growth differentiation factor 5 (cartilage-derived morphogenetic protein-1) 4177 rs225014 DIO2 1734 14 79739333 NM_000793 NP_000784 C/T T92A plus 5001961 738 YUSUKE JBIC-ALLELE Japanese (752) 1468 0.35 123 "by doubleHit,submitter,freq,cluster" 14q24.2-q24.3 "deiodinase, iodothyronine, type II" 4178 rs225014 DIO2 1734 14 79739333 NM_000793 NP_000784 C/T T92A plus 5210883 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by doubleHit,submitter,freq,cluster" 14q24.2-q24.3 "deiodinase, iodothyronine, type II" 4179 rs225014 DIO2 1734 14 79739333 NM_000793 NP_000784 C/T T92A plus 24132460 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.4 123 "by doubleHit,submitter,freq,cluster" 14q24.2-q24.3 "deiodinase, iodothyronine, type II" 4180 rs225014 DIO2 1734 14 79739333 NM_000793 NP_000784 C/T T92A plus 24132460 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.41 123 "by doubleHit,submitter,freq,cluster" 14q24.2-q24.3 "deiodinase, iodothyronine, type II" 4181 rs225014 DIO2 1734 14 79739333 NM_000793 NP_000784 C/T T92A plus 24132460 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.46 123 "by doubleHit,submitter,freq,cluster" 14q24.2-q24.3 "deiodinase, iodothyronine, type II" 4182 rs225014 DIO2 1734 14 79739333 NM_013989 NP_054644 C/T T92A plus 5001961 738 YUSUKE JBIC-ALLELE Japanese (752) 1468 0.35 123 "by doubleHit,submitter,freq,cluster" 14q24.2-q24.3 "deiodinase, iodothyronine, type II" 4183 rs225014 DIO2 1734 14 79739333 NM_013989 NP_054644 C/T T92A plus 5210883 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by doubleHit,submitter,freq,cluster" 14q24.2-q24.3 "deiodinase, iodothyronine, type II" 4184 rs225014 DIO2 1734 14 79739333 NM_013989 NP_054644 C/T T92A plus 24132460 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.4 123 "by doubleHit,submitter,freq,cluster" 14q24.2-q24.3 "deiodinase, iodothyronine, type II" 4185 rs225014 DIO2 1734 14 79739333 NM_013989 NP_054644 C/T T92A plus 24132460 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.41 123 "by doubleHit,submitter,freq,cluster" 14q24.2-q24.3 "deiodinase, iodothyronine, type II" 4186 rs225014 DIO2 1734 14 79739333 NM_013989 NP_054644 C/T T92A plus 24132460 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.46 123 "by doubleHit,submitter,freq,cluster" 14q24.2-q24.3 "deiodinase, iodothyronine, type II" 4187 rs226794 ADAMTS5 11096 21 27224226 NM_007038 NP_008969 A/G L692P plus 2775282 885 TSC-CSHL HapMap-CEPH-30-trios 118 1 123 "HapMap,doubleHit,submitter,freq,cluster" 21q21.3 "a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)" 4188 rs226794 ADAMTS5 11096 21 27224226 NM_007038 NP_008969 A/G L692P plus 2775282 1303 SEQUENOM CEPH CEPH (92) 92 0.2 123 "HapMap,doubleHit,submitter,freq,cluster" 21q21.3 "a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)" 4189 rs226794 ADAMTS5 11096 21 27224226 NM_007038 NP_008969 A/G L692P plus 4008063 634 PERLEGEN NCBI|NIHPDR NIHPDR 19 0.11 123 "HapMap,doubleHit,submitter,freq,cluster" 21q21.3 "a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)" 4190 rs226794 ADAMTS5 11096 21 27224226 NM_007038 NP_008969 A/G L692P plus 24025516 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "HapMap,doubleHit,submitter,freq,cluster" 21q21.3 "a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)" 4191 rs226794 ADAMTS5 11096 21 27224226 NM_007038 NP_008969 A/G L692P plus 24025516 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "HapMap,doubleHit,submitter,freq,cluster" 21q21.3 "a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)" 4192 rs226794 ADAMTS5 11096 21 27224226 NM_007038 NP_008969 A/G L692P plus 24025516 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.48 123 "HapMap,doubleHit,submitter,freq,cluster" 21q21.3 "a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)" 4193 rs226891 CP110 9738 16 19455248 NM_014711 NP_055526 C/G I252M plus 510878 771 TSC-CSHL SC_12_A CORIELL Asian (12) 22 0.18 123 "HapMap,freq,cluster" 16p13.11 CP110 protein 4194 rs226891 CP110 9738 16 19455248 NM_014711 NP_055526 C/G I252M plus 510878 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 20 0.2 123 "HapMap,freq,cluster" 16p13.11 CP110 protein 4195 rs226891 CP110 9738 16 19455248 NM_014711 NP_055526 C/G I252M plus 510878 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 12 0.25 123 "HapMap,freq,cluster" 16p13.11 CP110 protein 4196 rs226891 CP110 9738 16 19455248 NM_014711 NP_055526 C/G I252M plus 510878 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.1 123 "HapMap,freq,cluster" 16p13.11 CP110 protein 4197 rs226891 CP110 9738 16 19455248 NM_014711 NP_055526 C/G I252M plus 510878 1303 SEQUENOM CEPH CEPH (92) 92 0.15 123 "HapMap,freq,cluster" 16p13.11 CP110 protein 4198 rs226891 CP110 9738 16 19455248 NM_014711 NP_055526 C/G I252M plus 24068106 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.11 123 "HapMap,freq,cluster" 16p13.11 CP110 protein 4199 rs226891 CP110 9738 16 19455248 NM_014711 NP_055526 C/G I252M plus 24068106 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.09 123 "HapMap,freq,cluster" 16p13.11 CP110 protein 4200 rs226891 CP110 9738 16 19455248 NM_014711 NP_055526 C/G I252M plus 24068106 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.17 123 "HapMap,freq,cluster" 16p13.11 CP110 protein 4201 rs227653 CST7 8530 20 24878085 NM_003650 NP_003641 A/G E4K plus 3395667 1303 SEQUENOM CEPH CEPH (92) 92 0.09 120 by freq 20p11.21 cystatin F (leukocystatin) 4202 rs227787 OR3A3 8392 17 3271560 NM_012373 NP_036505 C/T K317E minus 506366 771 TSC-CSHL SC_12_A CORIELL Asian (12) 16 0.31 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13.3 "olfactory receptor, family 3, subfamily A, member 3" 4203 rs227787 OR3A3 8392 17 3271560 NM_012373 NP_036505 C/T K317E minus 506366 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 20 0.15 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13.3 "olfactory receptor, family 3, subfamily A, member 3" 4204 rs227787 OR3A3 8392 17 3271560 NM_012373 NP_036505 C/T K317E minus 1630503 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.23 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13.3 "olfactory receptor, family 3, subfamily A, member 3" 4205 rs227787 OR3A3 8392 17 3271560 NM_012373 NP_036505 C/T K317E minus 1630503 1303 SEQUENOM CEPH CEPH (92) 92 0.15 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13.3 "olfactory receptor, family 3, subfamily A, member 3" 4206 rs227787 OR3A3 8392 17 3271560 NM_012373 NP_036505 C/T K317E minus 24114722 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.1 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13.3 "olfactory receptor, family 3, subfamily A, member 3" 4207 rs227787 OR3A3 8392 17 3271560 NM_012373 NP_036505 C/T K317E minus 24114722 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13.3 "olfactory receptor, family 3, subfamily A, member 3" 4208 rs227787 OR3A3 8392 17 3271560 NM_012373 NP_036505 C/T K317E minus 24114722 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 17p13.3 "olfactory receptor, family 3, subfamily A, member 3" 4209 rs227789 OR3A3 8392 17 3270754 NM_012373 NP_036505 C/T T48I plus 4930677 738 YUSUKE JBIC-ALLELE Japanese (752) 1490 0.36 123 "by doubleHit,submitter,freq,cluster" 17p13.3 "olfactory receptor, family 3, subfamily A, member 3" 4210 rs228104 SLC37A1 54020 21 42859024 NM_018964 NP_061837 C/T V414I minus 1312432 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 123 "by doubleHit,submitter,freq,cluster" 21q22.3 "solute carrier family 37 (glycerol-3-phosphate transporter), member 1" 4211 rs228104 SLC37A1 54020 21 42859024 NM_018964 NP_061837 C/T V414I minus 1312432 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 123 "by doubleHit,submitter,freq,cluster" 21q22.3 "solute carrier family 37 (glycerol-3-phosphate transporter), member 1" 4212 rs228104 SLC37A1 54020 21 42859024 NM_018964 NP_061837 C/T V414I minus 1312432 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.34 123 "by doubleHit,submitter,freq,cluster" 21q22.3 "solute carrier family 37 (glycerol-3-phosphate transporter), member 1" 4213 rs228104 SLC37A1 54020 21 42859024 NM_018964 NP_061837 C/T V414I minus 4020771 634 PERLEGEN NCBI|NIHPDR NIHPDR 8 0.25 123 "by doubleHit,submitter,freq,cluster" 21q22.3 "solute carrier family 37 (glycerol-3-phosphate transporter), member 1" 4214 rs228104 SLC37A1 54020 21 42859024 NM_018964 NP_061837 C/T V414I minus 24132919 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.13 123 "by doubleHit,submitter,freq,cluster" 21q22.3 "solute carrier family 37 (glycerol-3-phosphate transporter), member 1" 4215 rs228104 SLC37A1 54020 21 42859024 NM_018964 NP_061837 C/T V414I minus 24132919 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.05 123 "by doubleHit,submitter,freq,cluster" 21q22.3 "solute carrier family 37 (glycerol-3-phosphate transporter), member 1" 4216 rs228104 SLC37A1 54020 21 42859024 NM_018964 NP_061837 C/T V414I minus 24132919 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 23 0.5 123 "by doubleHit,submitter,freq,cluster" 21q22.3 "solute carrier family 37 (glycerol-3-phosphate transporter), member 1" 4217 rs228648 UTS2 10911 1 7847696 NM_021995 NP_068835 A/G T21M plus 1644161 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.38 121 "by doubleHit,submitter,freq,cluster" 1p36 urotensin 2 4218 rs228648 UTS2 10911 1 7847696 NM_021995 NP_068835 A/G T21M plus 1644161 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 22 0.45 121 "by doubleHit,submitter,freq,cluster" 1p36 urotensin 2 4219 rs228648 UTS2 10911 1 7847696 NM_021995 NP_068835 A/G T21M plus 1644161 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 7 0.5 121 "by doubleHit,submitter,freq,cluster" 1p36 urotensin 2 4220 rs228648 UTS2 10911 1 7847696 NM_021995 NP_068835 A/G T21M plus 1644161 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.45 121 "by doubleHit,submitter,freq,cluster" 1p36 urotensin 2 4221 rs228648 UTS2 10911 1 7847696 NM_021995 NP_068835 A/G T21M plus 5000217 1072 RIKENSNPRC JBIC-ALLELE Japanese (752) 1284 0.37 121 "by doubleHit,submitter,freq,cluster" 1p36 urotensin 2 4222 rs228696 PER3 8863 1 7821759 NM_016831 NP_058515 C/T L827P plus 648693 1303 SEQUENOM CEPH CEPH (92) 92 0.04 121 "by cluster,freq" 1p36.23 period homolog 3 (Drosophila) 4223 rs228697 PER3 8863 1 7821845 NM_016831 NP_058515 C/G P856A plus 649604 1303 SEQUENOM CEPH CEPH (92) 92 0.05 120 by freq 1p36.23 period homolog 3 (Drosophila) 4224 rs228757 HDAC5 10014 17 39520411 NM_005474 NP_005465 C/G D593E minus 1824877 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.3 120 "HapMap,doubleHit,freq,cluster" 17q21 histone deacetylase 5 4225 rs228757 HDAC5 10014 17 39520411 NM_005474 NP_005465 C/G D593E minus 1824877 1303 SEQUENOM CEPH CEPH (92) 92 0.45 120 "HapMap,doubleHit,freq,cluster" 17q21 histone deacetylase 5 4226 rs228757 HDAC5 10014 17 39520411 NM_139205 NP_631944 C/G D593E minus 1824877 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.3 120 "HapMap,doubleHit,freq,cluster" 17q21 histone deacetylase 5 4227 rs228757 HDAC5 10014 17 39520411 NM_139205 NP_631944 C/G D593E minus 1824877 1303 SEQUENOM CEPH CEPH (92) 92 0.45 120 "HapMap,doubleHit,freq,cluster" 17q21 histone deacetylase 5 4228 rs228942 IL2RB 3560 22 35849119 NM_000878 NP_000869 A/C D391E minus 3189405 738 YUSUKE JBIC-ALLELE Japanese (752) 1500 0.25 120 "HapMap,doubleHit,freq,cluster" 22q13.1 "interleukin 2 receptor, beta" 4229 rs228942 IL2RB 3560 22 35849119 NM_000878 NP_000869 A/C D391E minus 4479476 595 PGA-UW-FHCRC PGA-AFRICAN-PANEL 48 0.08 120 "HapMap,doubleHit,freq,cluster" 22q13.1 "interleukin 2 receptor, beta" 4230 rs228942 IL2RB 3560 22 35849119 NM_000878 NP_000869 A/C D391E minus 4479476 596 PGA-UW-FHCRC PGA-EUROPEAN-PANEL 42 0.17 120 "HapMap,doubleHit,freq,cluster" 22q13.1 "interleukin 2 receptor, beta" 4231 rs228942 IL2RB 3560 22 35849119 NM_000878 NP_000869 A/C D391E minus 4479476 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.17 120 "HapMap,doubleHit,freq,cluster" 22q13.1 "interleukin 2 receptor, beta" 4232 rs228942 IL2RB 3560 22 35849119 NM_000878 NP_000869 A/C D391E minus 4479476 1303 SEQUENOM CEPH CEPH (92) 92 0.22 120 "HapMap,doubleHit,freq,cluster" 22q13.1 "interleukin 2 receptor, beta" 4233 rs229150 SCFD1 23256 14 30169489 NM_016106 NP_057190 C/T K63R minus 24542261 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.35 123 "by doubleHit,submitter,freq,cluster" 14q12 sec1 family domain containing 1 4234 rs229150 SCFD1 23256 14 30169489 NM_016106 NP_057190 C/T K63R minus 24542261 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.24 123 "by doubleHit,submitter,freq,cluster" 14q12 sec1 family domain containing 1 4235 rs229150 SCFD1 23256 14 30169489 NM_016106 NP_057190 C/T K63R minus 24542261 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.29 123 "by doubleHit,submitter,freq,cluster" 14q12 sec1 family domain containing 1 4236 rs229526 C1QTNF6 114904 22 35905922 NM_031910 NP_114116 C/G P42R minus 8296277 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.21 123 "HapMap,doubleHit,submitter,freq" 22q13.1 C1q and tumor necrosis factor related protein 6 4237 rs229526 C1QTNF6 114904 22 35905922 NM_031910 NP_114116 C/G P42R minus 8296277 1303 SEQUENOM CEPH CEPH (92) 92 0.19 123 "HapMap,doubleHit,submitter,freq" 22q13.1 C1q and tumor necrosis factor related protein 6 4238 rs229526 C1QTNF6 114904 22 35905922 NM_031910 NP_114116 C/G P42R minus 24601542 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.19 123 "HapMap,doubleHit,submitter,freq" 22q13.1 C1q and tumor necrosis factor related protein 6 4239 rs229526 C1QTNF6 114904 22 35905922 NM_031910 NP_114116 C/G P42R minus 24601542 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.15 123 "HapMap,doubleHit,submitter,freq" 22q13.1 C1q and tumor necrosis factor related protein 6 4240 rs229526 C1QTNF6 114904 22 35905922 NM_031910 NP_114116 C/G P42R minus 24601542 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.08 123 "HapMap,doubleHit,submitter,freq" 22q13.1 C1q and tumor necrosis factor related protein 6 4241 rs229526 C1QTNF6 114904 22 35905922 NM_182486 NP_872292 C/G P42R minus 8296277 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.21 123 "HapMap,doubleHit,submitter,freq" 22q13.1 C1q and tumor necrosis factor related protein 6 4242 rs229526 C1QTNF6 114904 22 35905922 NM_182486 NP_872292 C/G P42R minus 8296277 1303 SEQUENOM CEPH CEPH (92) 92 0.19 123 "HapMap,doubleHit,submitter,freq" 22q13.1 C1q and tumor necrosis factor related protein 6 4243 rs229526 C1QTNF6 114904 22 35905922 NM_182486 NP_872292 C/G P42R minus 24601542 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.19 123 "HapMap,doubleHit,submitter,freq" 22q13.1 C1q and tumor necrosis factor related protein 6 4244 rs229526 C1QTNF6 114904 22 35905922 NM_182486 NP_872292 C/G P42R minus 24601542 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.15 123 "HapMap,doubleHit,submitter,freq" 22q13.1 C1q and tumor necrosis factor related protein 6 4245 rs229526 C1QTNF6 114904 22 35905922 NM_182486 NP_872292 C/G P42R minus 24601542 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.08 123 "HapMap,doubleHit,submitter,freq" 22q13.1 C1q and tumor necrosis factor related protein 6 4246 rs229568 SSTR3 6753 22 35927111 NM_001051 NP_001042 C/G S411T minus 2048808 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by doubleHit,freq" 22q13.1 somatostatin receptor 3 4247 rs229568 SSTR3 6753 22 35927111 NM_001051 NP_001042 C/G S411T minus 23647560 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "by doubleHit,freq" 22q13.1 somatostatin receptor 3 4248 rs229568 SSTR3 6753 22 35927111 NM_001051 NP_001042 C/G S411T minus 23647560 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.14 123 "by doubleHit,freq" 22q13.1 somatostatin receptor 3 4249 rs229568 SSTR3 6753 22 35927111 NM_001051 NP_001042 C/G S411T minus 23647560 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by doubleHit,freq" 22q13.1 somatostatin receptor 3 4250 rs230898 TEKT3 64518 17 15158162 NM_031898 NP_114104 C/G G282A minus 609437 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 17p12 tektin 3 4251 rs230898 TEKT3 64518 17 15158162 NM_031898 NP_114104 C/G G282A minus 609437 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 12 0.5 123 "HapMap,doubleHit,submitter,freq,cluster" 17p12 tektin 3 4252 rs230898 TEKT3 64518 17 15158162 NM_031898 NP_114104 C/G G282A minus 609437 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.43 123 "HapMap,doubleHit,submitter,freq,cluster" 17p12 tektin 3 4253 rs230898 TEKT3 64518 17 15158162 NM_031898 NP_114104 C/G G282A minus 609437 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 90 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 17p12 tektin 3 4254 rs230898 TEKT3 64518 17 15158162 NM_031898 NP_114104 C/G G282A minus 609437 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.48 123 "HapMap,doubleHit,submitter,freq,cluster" 17p12 tektin 3 4255 rs230898 TEKT3 64518 17 15158162 NM_031898 NP_114104 C/G G282A minus 609437 1303 SEQUENOM CEPH CEPH (92) 92 0.38 123 "HapMap,doubleHit,submitter,freq,cluster" 17p12 tektin 3 4256 rs230898 TEKT3 64518 17 15158162 NM_031898 NP_114104 C/G G282A minus 24594026 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.46 123 "HapMap,doubleHit,submitter,freq,cluster" 17p12 tektin 3 4257 rs230898 TEKT3 64518 17 15158162 NM_031898 NP_114104 C/G G282A minus 24594026 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.22 123 "HapMap,doubleHit,submitter,freq,cluster" 17p12 tektin 3 4258 rs230898 TEKT3 64518 17 15158162 NM_031898 NP_114104 C/G G282A minus 24594026 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.38 123 "HapMap,doubleHit,submitter,freq,cluster" 17p12 tektin 3 4259 rs231458 23591 17 39350320 XM_498424 XP_498424 A/G T39M minus 1825055 1303 SEQUENOM CEPH CEPH (92) 92 0.48 116 "by doubleHit,freq,cluster" 17q21.31 apoptosis related protein 4260 rs231775 CTLA4 1493 2 204558220 NM_005214 NP_005205 A/G T17A plus 545243 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.04 123 "by doubleHit,submitter,freq,cluster" 2q33 cytotoxic T-lymphocyte-associated protein 4 4261 rs231775 CTLA4 1493 2 204558220 NM_005214 NP_005205 A/G T17A plus 545243 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.46 123 "by doubleHit,submitter,freq,cluster" 2q33 cytotoxic T-lymphocyte-associated protein 4 4262 rs231775 CTLA4 1493 2 204558220 NM_005214 NP_005205 A/G T17A plus 545243 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.07 123 "by doubleHit,submitter,freq,cluster" 2q33 cytotoxic T-lymphocyte-associated protein 4 4263 rs231775 CTLA4 1493 2 204558220 NM_005214 NP_005205 A/G T17A plus 545243 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 90 0.37 123 "by doubleHit,submitter,freq,cluster" 2q33 cytotoxic T-lymphocyte-associated protein 4 4264 rs231775 CTLA4 1493 2 204558220 NM_005214 NP_005205 A/G T17A plus 3203238 738 YUSUKE JBIC-ALLELE Japanese (752) 1290 0.26 123 "by doubleHit,submitter,freq,cluster" 2q33 cytotoxic T-lymphocyte-associated protein 4 4265 rs231775 CTLA4 1493 2 204558220 NM_005214 NP_005205 A/G T17A plus 6903722 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 198 0.3 123 "by doubleHit,submitter,freq,cluster" 2q33 cytotoxic T-lymphocyte-associated protein 4 4266 rs231775 CTLA4 1493 2 204558220 NM_005214 NP_005205 A/G T17A plus 6903722 775 SNP500CANCER CAUC1 Caucasian (31) 58 0.21 123 "by doubleHit,submitter,freq,cluster" 2q33 cytotoxic T-lymphocyte-associated protein 4 4267 rs231775 CTLA4 1493 2 204558220 NM_005214 NP_005205 A/G T17A plus 6903722 776 SNP500CANCER AFR1 African / African-American (24) 48 0.29 123 "by doubleHit,submitter,freq,cluster" 2q33 cytotoxic T-lymphocyte-associated protein 4 4268 rs231775 CTLA4 1493 2 204558220 NM_005214 NP_005205 A/G T17A plus 6903722 777 SNP500CANCER HISP1 Hispanic (23) 44 0.2 123 "by doubleHit,submitter,freq,cluster" 2q33 cytotoxic T-lymphocyte-associated protein 4 4269 rs231775 CTLA4 1493 2 204558220 NM_005214 NP_005205 A/G T17A plus 6903722 778 SNP500CANCER PAC1 Pacific Rim (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 2q33 cytotoxic T-lymphocyte-associated protein 4 4270 rs231775 CTLA4 1493 2 204558220 NM_005214 NP_005205 A/G T17A plus 6903722 1303 SEQUENOM CEPH CEPH (92) 92 0.31 123 "by doubleHit,submitter,freq,cluster" 2q33 cytotoxic T-lymphocyte-associated protein 4 4271 rs232518 NCAM2 4685 21 21668058 NM_004540 NP_004531 C/T L350P plus 2257786 780 TSC-CSHL WICGR8_ASIAN_POOLED WICGR Asian (30) 84 0.47 123 "by doubleHit,submitter,freq,cluster" 21q21.1 neural cell adhesion molecule 2 4272 rs232518 NCAM2 4685 21 21668058 NM_004540 NP_004531 C/T L350P plus 2257786 782 TSC-CSHL WICGR6_CAUCASIAN_POOLED WICGR Caucasian (48) 96 0.32 123 "by doubleHit,submitter,freq,cluster" 21q21.1 neural cell adhesion molecule 2 4273 rs232518 NCAM2 4685 21 21668058 NM_004540 NP_004531 C/T L350P plus 2257786 1303 SEQUENOM CEPH CEPH (92) 92 0.25 123 "by doubleHit,submitter,freq,cluster" 21q21.1 neural cell adhesion molecule 2 4274 rs232518 NCAM2 4685 21 21668058 NM_004540 NP_004531 C/T L350P plus 3243518 738 YUSUKE JBIC-ALLELE Japanese (752) 1484 0.45 123 "by doubleHit,submitter,freq,cluster" 21q21.1 neural cell adhesion molecule 2 4275 rs232518 NCAM2 4685 21 21668058 NM_004540 NP_004531 C/T L350P plus 4002906 634 PERLEGEN NCBI|NIHPDR NIHPDR 18 0.22 123 "by doubleHit,submitter,freq,cluster" 21q21.1 neural cell adhesion molecule 2 4276 rs232518 NCAM2 4685 21 21668058 NM_004540 NP_004531 C/T L350P plus 24209420 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.21 123 "by doubleHit,submitter,freq,cluster" 21q21.1 neural cell adhesion molecule 2 4277 rs232518 NCAM2 4685 21 21668058 NM_004540 NP_004531 C/T L350P plus 24209420 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "by doubleHit,submitter,freq,cluster" 21q21.1 neural cell adhesion molecule 2 4278 rs232518 NCAM2 4685 21 21668058 NM_004540 NP_004531 C/T L350P plus 24209420 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 21q21.1 neural cell adhesion molecule 2 4279 rs232729 WFDC10B 280664 20 43748023 NM_172006 NP_742003 A/G L8P plus 8392952 1303 SEQUENOM CEPH CEPH (92) 92 0.19 121 "by cluster,freq" 20q13.12 WAP four-disulfide core domain 10B 4280 rs233223 MEP1B 4225 18 28049099 NM_005925 NP_005916 A/G S546P minus 557201 771 TSC-CSHL SC_12_A CORIELL Asian (12) 22 1 120 "by doubleHit,cluster" 18q12.2-q12.3 "meprin A, beta" 4281 rs233223 MEP1B 4225 18 28049099 NM_005925 NP_005916 A/G S546P minus 557201 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 1 120 "by doubleHit,cluster" 18q12.2-q12.3 "meprin A, beta" 4282 rs233223 MEP1B 4225 18 28049099 NM_005925 NP_005916 A/G S546P minus 557201 1303 SEQUENOM CEPH CEPH (92) 92 0.12 120 "by doubleHit,cluster" 18q12.2-q12.3 "meprin A, beta" 4283 rs235035 B4GALT5 9334 20 47686321 NM_004776 NP_004767 C/T D368N plus 1338160 685 TSC-SANGER SC_96_C 18 0.06 120 by freq 20q13.1-q13.2 "UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5" 4284 rs235035 B4GALT5 9334 20 47686321 NM_004776 NP_004767 C/T D368N plus 1338160 688 TSC-SANGER SC_12_AA CORIELL Asian (12) 4 0.09 120 by freq 20q13.1-q13.2 "UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5" 4285 rs235035 B4GALT5 9334 20 47686321 NM_004776 NP_004767 C/T D368N plus 1338160 1303 SEQUENOM CEPH CEPH (92) 92 0.14 120 by freq 20q13.1-q13.2 "UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5" 4286 rs235468 XTP2 23215 1 168246389 NM_015172 NP_055987 C/G S1624C minus 1213464 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.25 123 "by doubleHit,submitter,freq,cluster" 1q23.3 HBxAg transactivated protein 2 4287 rs235468 XTP2 23215 1 168246389 NM_015172 NP_055987 C/G S1624C minus 1213464 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.17 123 "by doubleHit,submitter,freq,cluster" 1q23.3 HBxAg transactivated protein 2 4288 rs235468 XTP2 23215 1 168246389 NM_015172 NP_055987 C/G S1624C minus 1213464 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.21 123 "by doubleHit,submitter,freq,cluster" 1q23.3 HBxAg transactivated protein 2 4289 rs235468 XTP2 23215 1 168246389 NM_015172 NP_055987 C/G S1624C minus 1643783 1303 SEQUENOM CEPH CEPH (92) 92 0.18 123 "by doubleHit,submitter,freq,cluster" 1q23.3 HBxAg transactivated protein 2 4290 rs235468 XTP2 23215 1 168246389 NM_015172 NP_055987 C/G S1624C minus 2517285 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.25 123 "by doubleHit,submitter,freq,cluster" 1q23.3 HBxAg transactivated protein 2 4291 rs235468 XTP2 23215 1 168246389 NM_015172 NP_055987 C/G S1624C minus 2517285 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.17 123 "by doubleHit,submitter,freq,cluster" 1q23.3 HBxAg transactivated protein 2 4292 rs235468 XTP2 23215 1 168246389 NM_015172 NP_055987 C/G S1624C minus 2517285 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.21 123 "by doubleHit,submitter,freq,cluster" 1q23.3 HBxAg transactivated protein 2 4293 rs235468 XTP2 23215 1 168246389 NM_015172 NP_055987 C/G S1624C minus 23201224 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.21 123 "by doubleHit,submitter,freq,cluster" 1q23.3 HBxAg transactivated protein 2 4294 rs235468 XTP2 23215 1 168246389 NM_015172 NP_055987 C/G S1624C minus 23201224 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.26 123 "by doubleHit,submitter,freq,cluster" 1q23.3 HBxAg transactivated protein 2 4295 rs235468 XTP2 23215 1 168246389 NM_015172 NP_055987 C/G S1624C minus 23201224 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.08 123 "by doubleHit,submitter,freq,cluster" 1q23.3 HBxAg transactivated protein 2 4296 rs235768 BMP2 650 20 6707115 NM_001200 NP_001191 A/T R190S plus 304296 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.25 121 "by doubleHit,freq,cluster" 20p12 bone morphogenetic protein 2 4297 rs235768 BMP2 650 20 6707115 NM_001200 NP_001191 A/T R190S plus 304296 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.17 121 "by doubleHit,freq,cluster" 20p12 bone morphogenetic protein 2 4298 rs235768 BMP2 650 20 6707115 NM_001200 NP_001191 A/T R190S plus 304296 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 7 0.5 121 "by doubleHit,freq,cluster" 20p12 bone morphogenetic protein 2 4299 rs235768 BMP2 650 20 6707115 NM_001200 NP_001191 A/T R190S plus 304296 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 90 0.39 121 "by doubleHit,freq,cluster" 20p12 bone morphogenetic protein 2 4300 rs235768 BMP2 650 20 6707115 NM_001200 NP_001191 A/T R190S plus 3176830 619 WICVAR MITOGPOP6 CORIELL Mixed 50 0.22 121 "by doubleHit,freq,cluster" 20p12 bone morphogenetic protein 2 4301 rs235768 BMP2 650 20 6707115 NM_001200 NP_001191 A/T R190S plus 8367997 1303 SEQUENOM CEPH CEPH (92) 92 0.29 121 "by doubleHit,freq,cluster" 20p12 bone morphogenetic protein 2 4302 rs236110 MCM8 84515 20 5881108 NM_032485 NP_115874 G/T Q63K minus 569235 1303 SEQUENOM CEPH CEPH (92) 92 0.09 123 "by doubleHit,submitter,freq,cluster" 20p12.3 MCM8 minichromosome maintenance deficient 8 (S. cerevisiae) 4303 rs236110 MCM8 84515 20 5881108 NM_032485 NP_115874 G/T Q63K minus 23544265 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.1 123 "by doubleHit,submitter,freq,cluster" 20p12.3 MCM8 minichromosome maintenance deficient 8 (S. cerevisiae) 4304 rs236110 MCM8 84515 20 5881108 NM_032485 NP_115874 G/T Q63K minus 23544265 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "by doubleHit,submitter,freq,cluster" 20p12.3 MCM8 minichromosome maintenance deficient 8 (S. cerevisiae) 4305 rs236110 MCM8 84515 20 5881108 NM_032485 NP_115874 G/T Q63K minus 23544265 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.17 123 "by doubleHit,submitter,freq,cluster" 20p12.3 MCM8 minichromosome maintenance deficient 8 (S. cerevisiae) 4306 rs236110 MCM8 84515 20 5881108 NM_182802 NP_877954 G/T Q63K minus 569235 1303 SEQUENOM CEPH CEPH (92) 92 0.09 123 "by doubleHit,submitter,freq,cluster" 20p12.3 MCM8 minichromosome maintenance deficient 8 (S. cerevisiae) 4307 rs236110 MCM8 84515 20 5881108 NM_182802 NP_877954 G/T Q63K minus 23544265 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.1 123 "by doubleHit,submitter,freq,cluster" 20p12.3 MCM8 minichromosome maintenance deficient 8 (S. cerevisiae) 4308 rs236110 MCM8 84515 20 5881108 NM_182802 NP_877954 G/T Q63K minus 23544265 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "by doubleHit,submitter,freq,cluster" 20p12.3 MCM8 minichromosome maintenance deficient 8 (S. cerevisiae) 4309 rs236110 MCM8 84515 20 5881108 NM_182802 NP_877954 G/T Q63K minus 23544265 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.17 123 "by doubleHit,submitter,freq,cluster" 20p12.3 MCM8 minichromosome maintenance deficient 8 (S. cerevisiae) 4310 rs236150 CHGB 1114 20 5851141 NM_001819 NP_001810 C/G K117N plus 1338565 638 TSC-CSHL TSC_42_AA TSC African American (42) 82 0.16 123 by freq 20pter-p12 chromogranin B (secretogranin 1) 4311 rs236150 CHGB 1114 20 5851141 NM_001819 NP_001810 C/G K117N plus 1338565 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 82 1 123 by freq 20pter-p12 chromogranin B (secretogranin 1) 4312 rs236150 CHGB 1114 20 5851141 NM_001819 NP_001810 C/G K117N plus 1338565 640 TSC-CSHL TSC_42_A TSC Asian (42) 82 1 123 by freq 20pter-p12 chromogranin B (secretogranin 1) 4313 rs236150 CHGB 1114 20 5851141 NM_001819 NP_001810 C/G K117N plus 1338565 1303 SEQUENOM CEPH CEPH (92) 92 1 123 by freq 20pter-p12 chromogranin B (secretogranin 1) 4314 rs236151 CHGB 1114 20 5851517 NM_001819 NP_001810 A/G T243A plus 8367065 1303 SEQUENOM CEPH CEPH (92) 92 0.3 121 "by doubleHit,freq,cluster" 20pter-p12 chromogranin B (secretogranin 1) 4315 rs236152 CHGB 1114 20 5851848 NM_001819 NP_001810 C/G A353G plus 134632 1303 SEQUENOM CEPH CEPH (92) 92 0.24 111 "by doubleHit,freq" 20pter-p12 chromogranin B (secretogranin 1) 4316 rs237831 DDX28 55794 16 66614597 NM_018380 NP_060850 A/G T4A minus 129227 638 TSC-CSHL TSC_42_AA TSC African American (42) 82 1 121 "HapMap,freq" 16q22.1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 4317 rs237831 DDX28 55794 16 66614597 NM_018380 NP_060850 A/G T4A minus 129227 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 78 0.14 121 "HapMap,freq" 16q22.1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 4318 rs237831 DDX28 55794 16 66614597 NM_018380 NP_060850 A/G T4A minus 129227 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 121 "HapMap,freq" 16q22.1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 4319 rs237831 DDX28 55794 16 66614597 NM_018380 NP_060850 A/G T4A minus 129227 771 TSC-CSHL SC_12_A CORIELL Asian (12) 16 1 121 "HapMap,freq" 16q22.1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 4320 rs237831 DDX28 55794 16 66614597 NM_018380 NP_060850 A/G T4A minus 129227 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 16 1 121 "HapMap,freq" 16q22.1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 4321 rs237831 DDX28 55794 16 66614597 NM_018380 NP_060850 A/G T4A minus 129227 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.07 121 "HapMap,freq" 16q22.1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 4322 rs237831 DDX28 55794 16 66614597 NM_018380 NP_060850 A/G T4A minus 129227 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.07 121 "HapMap,freq" 16q22.1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 4323 rs237831 DDX28 55794 16 66614597 NM_018380 NP_060850 A/G T4A minus 129227 1303 SEQUENOM CEPH CEPH (92) 92 0.14 121 "HapMap,freq" 16q22.1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 4324 rs237906 OXTR 5021 3 8784828 NM_000916 NP_000907 A/C A16S plus 24797803 1303 SEQUENOM CEPH CEPH (92) 184 0.29 123 by freq 3p25 oxytocin receptor 4325 rs238234 CAMTA2 23125 17 4824542 NM_015099 NP_055914 C/G A267P plus 129424 1303 SEQUENOM CEPH CEPH (92) 92 0.26 121 "by doubleHit,freq,cluster" 17p13.3 calmodulin binding transcription activator 2 4326 rs238238 ENO3 2027 17 4797122 NM_001976 NP_001967 A/G S71N plus 525802 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.46 120 "HapMap,doubleHit,freq,cluster" 17pter-p11 "enolase 3, (beta, muscle)" 4327 rs238238 ENO3 2027 17 4797122 NM_001976 NP_001967 A/G S71N plus 525802 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 22 0.23 120 "HapMap,doubleHit,freq,cluster" 17pter-p11 "enolase 3, (beta, muscle)" 4328 rs238238 ENO3 2027 17 4797122 NM_001976 NP_001967 A/G S71N plus 525802 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.36 120 "HapMap,doubleHit,freq,cluster" 17pter-p11 "enolase 3, (beta, muscle)" 4329 rs238238 ENO3 2027 17 4797122 NM_001976 NP_001967 A/G S71N plus 525802 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.29 120 "HapMap,doubleHit,freq,cluster" 17pter-p11 "enolase 3, (beta, muscle)" 4330 rs238238 ENO3 2027 17 4797122 NM_001976 NP_001967 A/G S71N plus 525802 1303 SEQUENOM CEPH CEPH (92) 92 0.39 120 "HapMap,doubleHit,freq,cluster" 17pter-p11 "enolase 3, (beta, muscle)" 4331 rs238238 ENO3 2027 17 4797122 NM_001976 NP_001967 A/G S71N plus 2985046 738 YUSUKE JBIC-ALLELE Japanese (752) 1072 0.42 120 "HapMap,doubleHit,freq,cluster" 17pter-p11 "enolase 3, (beta, muscle)" 4332 rs238238 ENO3 2027 17 4797122 NM_053013 NP_443739 A/G S71N plus 525802 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.46 120 "HapMap,doubleHit,freq,cluster" 17pter-p11 "enolase 3, (beta, muscle)" 4333 rs238238 ENO3 2027 17 4797122 NM_053013 NP_443739 A/G S71N plus 525802 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 22 0.23 120 "HapMap,doubleHit,freq,cluster" 17pter-p11 "enolase 3, (beta, muscle)" 4334 rs238238 ENO3 2027 17 4797122 NM_053013 NP_443739 A/G S71N plus 525802 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.36 120 "HapMap,doubleHit,freq,cluster" 17pter-p11 "enolase 3, (beta, muscle)" 4335 rs238238 ENO3 2027 17 4797122 NM_053013 NP_443739 A/G S71N plus 525802 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.29 120 "HapMap,doubleHit,freq,cluster" 17pter-p11 "enolase 3, (beta, muscle)" 4336 rs238238 ENO3 2027 17 4797122 NM_053013 NP_443739 A/G S71N plus 525802 1303 SEQUENOM CEPH CEPH (92) 92 0.39 120 "HapMap,doubleHit,freq,cluster" 17pter-p11 "enolase 3, (beta, muscle)" 4337 rs238238 ENO3 2027 17 4797122 NM_053013 NP_443739 A/G S71N plus 2985046 738 YUSUKE JBIC-ALLELE Japanese (752) 1072 0.42 120 "HapMap,doubleHit,freq,cluster" 17pter-p11 "enolase 3, (beta, muscle)" 4338 rs238239 ENO3 2027 17 4797326 NM_001976 NP_001967 C/T A85V plus 1648469 1303 SEQUENOM CEPH CEPH (92) 92 0.45 120 "by cluster,freq" 17pter-p11 "enolase 3, (beta, muscle)" 4339 rs238239 ENO3 2027 17 4797326 NM_053013 NP_443739 C/T A85V plus 1648469 1303 SEQUENOM CEPH CEPH (92) 92 0.45 120 "by cluster,freq" 17pter-p11 "enolase 3, (beta, muscle)" 4340 rs240033 SLC22A14 9389 3 38332965 NM_004803 NP_004794 C/G P560R plus 1841581 885 TSC-CSHL HapMap-CEPH-30-trios 106 0.27 123 "HapMap,freq,cluster" 3p21.3 "solute carrier family 22 (organic cation transporter), member 14" 4341 rs240033 SLC22A14 9389 3 38332965 NM_004803 NP_004794 C/G P560R plus 1841581 1303 SEQUENOM CEPH CEPH (92) 92 0.31 123 "HapMap,freq,cluster" 3p21.3 "solute carrier family 22 (organic cation transporter), member 14" 4342 rs240033 SLC22A14 9389 3 38332965 NM_004803 NP_004794 C/G P560R plus 2983749 738 YUSUKE JBIC-ALLELE Japanese (752) 1476 0.27 123 "HapMap,freq,cluster" 3p21.3 "solute carrier family 22 (organic cation transporter), member 14" 4343 rs240033 SLC22A14 9389 3 38332965 NM_004803 NP_004794 C/G P560R plus 24298089 1371 PERLEGEN AFD_EUR_PANEL European American (24) 40 0.43 123 "HapMap,freq,cluster" 3p21.3 "solute carrier family 22 (organic cation transporter), member 14" 4344 rs240033 SLC22A14 9389 3 38332965 NM_004803 NP_004794 C/G P560R plus 24298089 1372 PERLEGEN AFD_AFR_PANEL African American (24) 36 0.22 123 "HapMap,freq,cluster" 3p21.3 "solute carrier family 22 (organic cation transporter), member 14" 4345 rs240033 SLC22A14 9389 3 38332965 NM_004803 NP_004794 C/G P560R plus 24298089 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.22 123 "HapMap,freq,cluster" 3p21.3 "solute carrier family 22 (organic cation transporter), member 14" 4346 rs240768 HELIC1 10973 6 101064065 NM_006828 NP_006819 C/T Y2176C plus 1631964 1303 SEQUENOM CEPH CEPH (92) 92 0.02 123 "by doubleHit,submitter,freq,cluster" 6q16 "helicase, ATP binding 1" 4347 rs240768 HELIC1 10973 6 101064065 NM_006828 NP_006819 C/T Y2176C plus 5009439 738 YUSUKE JBIC-ALLELE Japanese (752) 1496 0.11 123 "by doubleHit,submitter,freq,cluster" 6q16 "helicase, ATP binding 1" 4348 rs240768 HELIC1 10973 6 101064065 NM_006828 NP_006819 C/T Y2176C plus 16335969 901 AFFY AfAm 12 0.17 123 "by doubleHit,submitter,freq,cluster" 6q16 "helicase, ATP binding 1" 4349 rs240768 HELIC1 10973 6 101064065 NM_006828 NP_006819 C/T Y2176C plus 16335969 902 AFFY Caucasian 24 0.13 123 "by doubleHit,submitter,freq,cluster" 6q16 "helicase, ATP binding 1" 4350 rs240768 HELIC1 10973 6 101064065 NM_006828 NP_006819 C/T Y2176C plus 16335969 903 AFFY Asian 10 0.2 123 "by doubleHit,submitter,freq,cluster" 6q16 "helicase, ATP binding 1" 4351 rs240768 HELIC1 10973 6 101064065 NM_006828 NP_006819 C/T Y2176C plus 16335969 904 AFFY CEPH 12 1 123 "by doubleHit,submitter,freq,cluster" 6q16 "helicase, ATP binding 1" 4352 rs240768 HELIC1 10973 6 101064065 NM_006828 NP_006819 C/T Y2176C plus 16335969 905 AFFY PDpanel 46 0.24 123 "by doubleHit,submitter,freq,cluster" 6q16 "helicase, ATP binding 1" 4353 rs240768 HELIC1 10973 6 101064065 NM_006828 NP_006819 C/T Y2176C plus 23407849 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.02 123 "by doubleHit,submitter,freq,cluster" 6q16 "helicase, ATP binding 1" 4354 rs240768 HELIC1 10973 6 101064065 NM_006828 NP_006819 C/T Y2176C plus 23407849 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.22 123 "by doubleHit,submitter,freq,cluster" 6q16 "helicase, ATP binding 1" 4355 rs240768 HELIC1 10973 6 101064065 NM_006828 NP_006819 C/T Y2176C plus 23407849 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.15 123 "by doubleHit,submitter,freq,cluster" 6q16 "helicase, ATP binding 1" 4356 rs240780 HELIC1 10973 6 101070868 NM_006828 NP_006819 C/G S1995C plus 1631950 1303 SEQUENOM CEPH CEPH (92) 92 0.34 123 "by doubleHit,submitter,freq,cluster" 6q16 "helicase, ATP binding 1" 4357 rs240780 HELIC1 10973 6 101070868 NM_006828 NP_006819 C/G S1995C plus 24425049 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.46 123 "by doubleHit,submitter,freq,cluster" 6q16 "helicase, ATP binding 1" 4358 rs240780 HELIC1 10973 6 101070868 NM_006828 NP_006819 C/G S1995C plus 24425049 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.14 123 "by doubleHit,submitter,freq,cluster" 6q16 "helicase, ATP binding 1" 4359 rs240780 HELIC1 10973 6 101070868 NM_006828 NP_006819 C/G S1995C plus 24425049 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "by doubleHit,submitter,freq,cluster" 6q16 "helicase, ATP binding 1" 4360 rs241419 PSMB9 5698 6 32931926 NM_002800 NP_002791 C/T V32I minus 1448588 1303 SEQUENOM CEPH CEPH (92) 92 0.04 123 "by cluster,freq" 6p21.3 "proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2)" 4361 rs241419 PSMB9 5698 6 32931926 NM_002800 NP_002791 C/T V32I minus 23718280 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.02 123 "by cluster,freq" 6p21.3 "proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2)" 4362 rs241419 PSMB9 5698 6 32931926 NM_002800 NP_002791 C/T V32I minus 23718280 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.02 123 "by cluster,freq" 6p21.3 "proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2)" 4363 rs241419 PSMB9 5698 6 32931926 NM_002800 NP_002791 C/T V32I minus 23718280 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.02 123 "by cluster,freq" 6p21.3 "proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2)" 4364 rs241419 PSMB9 5698 6 32931926 NM_002800 NP_002791 C/T V32I minus 24796295 1303 SEQUENOM CEPH CEPH (92) 184 0.05 123 "by cluster,freq" 6p21.3 "proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2)" 4365 rs241419 PSMB9 5698 6 32931926 NM_148954 NP_683756 C/T V22I minus 1448588 1303 SEQUENOM CEPH CEPH (92) 92 0.04 123 "by cluster,freq" 6p21.3 "proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2)" 4366 rs241419 PSMB9 5698 6 32931926 NM_148954 NP_683756 C/T V22I minus 23718280 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.02 123 "by cluster,freq" 6p21.3 "proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2)" 4367 rs241419 PSMB9 5698 6 32931926 NM_148954 NP_683756 C/T V22I minus 23718280 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.02 123 "by cluster,freq" 6p21.3 "proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2)" 4368 rs241419 PSMB9 5698 6 32931926 NM_148954 NP_683756 C/T V22I minus 23718280 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.02 123 "by cluster,freq" 6p21.3 "proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2)" 4369 rs241419 PSMB9 5698 6 32931926 NM_148954 NP_683756 C/T V22I minus 24796295 1303 SEQUENOM CEPH CEPH (92) 184 0.05 123 "by cluster,freq" 6p21.3 "proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2)" 4370 rs241447 TAP2 6891 6 32904729 NM_000544 NP_000535 A/G T665A minus 1954321 1303 SEQUENOM CEPH CEPH (92) 92 0.13 123 "by doubleHit,freq,cluster" 6p21.3 "transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)" 4371 rs241447 TAP2 6891 6 32904729 NM_000544 NP_000535 A/G T665A minus 2985102 738 YUSUKE JBIC-ALLELE Japanese (752) 1474 0.35 123 "by doubleHit,freq,cluster" 6p21.3 "transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)" 4372 rs241447 TAP2 6891 6 32904729 NM_000544 NP_000535 A/G T665A minus 3173073 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 50 0.22 123 "by doubleHit,freq,cluster" 6p21.3 "transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)" 4373 rs241447 TAP2 6891 6 32904729 NM_000544 NP_000535 A/G T665A minus 24796293 1303 SEQUENOM CEPH CEPH (92) 184 0.27 123 "by doubleHit,freq,cluster" 6p21.3 "transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)" 4374 rs241448 TAP2 6891 6 32904663 NM_000544 NP_000535 C/T *687Q minus 1954322 1303 SEQUENOM CEPH CEPH (92) 92 0.3 120 "by doubleHit,freq,cluster" 6p21.3 "transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)" 4375 rs241448 TAP2 6891 6 32904663 NM_000544 NP_000535 C/T *687Q minus 3173074 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 48 0.19 120 "by doubleHit,freq,cluster" 6p21.3 "transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)" 4376 rs241571 PKD1 5310 16 2099968 NM_000296 NP_000287 G/T T1734K plus 708297 1303 SEQUENOM CEPH CEPH (92) 92 0.1 87 by freq 16p13.3 polycystic kidney disease 1 (autosomal dominant) 4377 rs241572 PKD1 5310 16 2100499 NM_000296 NP_000287 C/G R1557P minus 311046 687 TSC-SANGER SC_12_CA CEPH Caucasians (12) 9 0.5 86 "HapMap,freq" 16p13.3 polycystic kidney disease 1 (autosomal dominant) 4378 rs241572 PKD1 5310 16 2100499 NM_000296 NP_000287 C/G R1557P minus 311046 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 5 0.5 86 "HapMap,freq" 16p13.3 polycystic kidney disease 1 (autosomal dominant) 4379 rs241572 PKD1 5310 16 2100499 NM_000296 NP_000287 C/G R1557P minus 726558 885 TSC-CSHL HapMap-CEPH-30-trios 118 1 86 "HapMap,freq" 16p13.3 polycystic kidney disease 1 (autosomal dominant) 4380 rs241572 PKD1 5310 16 2100499 NM_000296 NP_000287 C/G R1557P minus 726558 1303 SEQUENOM CEPH CEPH (92) 92 1 86 "HapMap,freq" 16p13.3 polycystic kidney disease 1 (autosomal dominant) 4381 rs241573 PKD1 5310 16 2101828 NM_000296 NP_000287 A/C L1114R plus 655697 1303 SEQUENOM CEPH CEPH (92) 92 0.42 87 by freq 16p13.3 polycystic kidney disease 1 (autosomal dominant) 4382 rs242056 SHREW1 55966 1 4683090 NM_018836 NP_061324 A/G G263R plus 1819542 1303 SEQUENOM CEPH CEPH (92) 92 0.1 119 "by cluster,freq" 1p36.31 transmembrane protein SHREW1 4383 rs242056 SHREW1 55966 1 4683090 NM_018836 NP_061324 A/G G263R plus 2985830 738 YUSUKE JBIC-ALLELE Japanese (752) 1468 0.35 119 "by cluster,freq" 1p36.31 transmembrane protein SHREW1 4384 rs242944 IMP5 162540 17 41278960 NM_175882 NP_787078 C/T H303R minus 1844524 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.4 123 "HapMap,doubleHit,submitter,freq" 17q21.31 intramembrane protease 5 4385 rs242944 IMP5 162540 17 41278960 NM_175882 NP_787078 C/T H303R minus 24592479 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.4 123 "HapMap,doubleHit,submitter,freq" 17q21.31 intramembrane protease 5 4386 rs242944 IMP5 162540 17 41278960 NM_175882 NP_787078 C/T H303R minus 24592479 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.32 123 "HapMap,doubleHit,submitter,freq" 17q21.31 intramembrane protease 5 4387 rs242944 IMP5 162540 17 41278960 NM_175882 NP_787078 C/T H303R minus 24592479 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.08 123 "HapMap,doubleHit,submitter,freq" 17q21.31 intramembrane protease 5 4388 rs243383 CHAF1A 10036 19 4393999 NM_005483 NP_005474 G/T S932A plus 533184 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 19p13.3 "chromatin assembly factor 1, subunit A (p150)" 4389 rs243383 CHAF1A 10036 19 4393999 NM_005483 NP_005474 G/T S932A plus 24060164 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.02 123 "by cluster,freq" 19p13.3 "chromatin assembly factor 1, subunit A (p150)" 4390 rs243383 CHAF1A 10036 19 4393999 NM_005483 NP_005474 G/T S932A plus 24060164 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by cluster,freq" 19p13.3 "chromatin assembly factor 1, subunit A (p150)" 4391 rs243383 CHAF1A 10036 19 4393999 NM_005483 NP_005474 G/T S932A plus 24060164 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.04 123 "by cluster,freq" 19p13.3 "chromatin assembly factor 1, subunit A (p150)" 4392 rs244903 RARS 5917 5 167846088 NM_002887 NP_002878 A/G V3I plus 818727 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.17 123 "HapMap,doubleHit,submitter,freq,cluster" 5q35.1 arginyl-tRNA synthetase 4393 rs244903 RARS 5917 5 167846088 NM_002887 NP_002878 A/G V3I plus 818727 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 22 1 123 "HapMap,doubleHit,submitter,freq,cluster" 5q35.1 arginyl-tRNA synthetase 4394 rs244903 RARS 5917 5 167846088 NM_002887 NP_002878 A/G V3I plus 818727 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.29 123 "HapMap,doubleHit,submitter,freq,cluster" 5q35.1 arginyl-tRNA synthetase 4395 rs244903 RARS 5917 5 167846088 NM_002887 NP_002878 A/G V3I plus 818727 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 90 0.44 123 "HapMap,doubleHit,submitter,freq,cluster" 5q35.1 arginyl-tRNA synthetase 4396 rs244903 RARS 5917 5 167846088 NM_002887 NP_002878 A/G V3I plus 2274905 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.49 123 "HapMap,doubleHit,submitter,freq,cluster" 5q35.1 arginyl-tRNA synthetase 4397 rs244903 RARS 5917 5 167846088 NM_002887 NP_002878 A/G V3I plus 2274905 1303 SEQUENOM CEPH CEPH (92) 92 0.42 123 "HapMap,doubleHit,submitter,freq,cluster" 5q35.1 arginyl-tRNA synthetase 4398 rs244903 RARS 5917 5 167846088 NM_002887 NP_002878 A/G V3I plus 3253026 738 YUSUKE JBIC-ALLELE Japanese (752) 1500 0.1 123 "HapMap,doubleHit,submitter,freq,cluster" 5q35.1 arginyl-tRNA synthetase 4399 rs244903 RARS 5917 5 167846088 NM_002887 NP_002878 A/G V3I plus 24671348 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.42 123 "HapMap,doubleHit,submitter,freq,cluster" 5q35.1 arginyl-tRNA synthetase 4400 rs244903 RARS 5917 5 167846088 NM_002887 NP_002878 A/G V3I plus 24671348 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.11 123 "HapMap,doubleHit,submitter,freq,cluster" 5q35.1 arginyl-tRNA synthetase 4401 rs244903 RARS 5917 5 167846088 NM_002887 NP_002878 A/G V3I plus 24671348 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.06 123 "HapMap,doubleHit,submitter,freq,cluster" 5q35.1 arginyl-tRNA synthetase 4402 rs246074 PCDHAC1 56135 5 140288153 NM_018898 NP_061721 C/G L498V minus 611472 1303 SEQUENOM CEPH CEPH (92) 92 0.38 123 "by doubleHit,submitter,freq,cluster" 5q31 "protocadherin alpha subfamily C, 1" 4403 rs246074 PCDHAC1 56135 5 140288153 NM_018898 NP_061721 C/G L498V minus 2986036 738 YUSUKE JBIC-ALLELE Japanese (752) 1482 0.45 123 "by doubleHit,submitter,freq,cluster" 5q31 "protocadherin alpha subfamily C, 1" 4404 rs246074 PCDHAC1 56135 5 140288153 NM_018898 NP_061721 C/G L498V minus 24145291 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.46 123 "by doubleHit,submitter,freq,cluster" 5q31 "protocadherin alpha subfamily C, 1" 4405 rs246074 PCDHAC1 56135 5 140288153 NM_018898 NP_061721 C/G L498V minus 24145291 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.29 123 "by doubleHit,submitter,freq,cluster" 5q31 "protocadherin alpha subfamily C, 1" 4406 rs246074 PCDHAC1 56135 5 140288153 NM_018898 NP_061721 C/G L498V minus 24145291 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.46 123 "by doubleHit,submitter,freq,cluster" 5q31 "protocadherin alpha subfamily C, 1" 4407 rs246074 PCDHAC1 56135 5 140288153 NM_031882 NP_114088 C/G L498V minus 611472 1303 SEQUENOM CEPH CEPH (92) 92 0.38 123 "by doubleHit,submitter,freq,cluster" 5q31 "protocadherin alpha subfamily C, 1" 4408 rs246074 PCDHAC1 56135 5 140288153 NM_031882 NP_114088 C/G L498V minus 2986036 738 YUSUKE JBIC-ALLELE Japanese (752) 1482 0.45 123 "by doubleHit,submitter,freq,cluster" 5q31 "protocadherin alpha subfamily C, 1" 4409 rs246074 PCDHAC1 56135 5 140288153 NM_031882 NP_114088 C/G L498V minus 24145291 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.46 123 "by doubleHit,submitter,freq,cluster" 5q31 "protocadherin alpha subfamily C, 1" 4410 rs246074 PCDHAC1 56135 5 140288153 NM_031882 NP_114088 C/G L498V minus 24145291 1372 PERLEGEN AFD_AFR_PANEL African American (24) 38 0.29 123 "by doubleHit,submitter,freq,cluster" 5q31 "protocadherin alpha subfamily C, 1" 4411 rs246074 PCDHAC1 56135 5 140288153 NM_031882 NP_114088 C/G L498V minus 24145291 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.46 123 "by doubleHit,submitter,freq,cluster" 5q31 "protocadherin alpha subfamily C, 1" 4412 rs246105 PJA2 9867 5 108700845 NM_014819 NP_055634 C/T A705T plus 1982242 1303 SEQUENOM CEPH CEPH (92) 92 0.45 123 "by doubleHit,freq,cluster" 5q22.1 "praja 2, RING-H2 motif containing" 4413 rs246105 PJA2 9867 5 108700845 NM_014819 NP_055634 C/T A705T plus 24188586 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.25 123 "by doubleHit,freq,cluster" 5q22.1 "praja 2, RING-H2 motif containing" 4414 rs246105 PJA2 9867 5 108700845 NM_014819 NP_055634 C/T A705T plus 24188586 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.15 123 "by doubleHit,freq,cluster" 5q22.1 "praja 2, RING-H2 motif containing" 4415 rs246105 PJA2 9867 5 108700845 NM_014819 NP_055634 C/T A705T plus 24188586 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.44 123 "by doubleHit,freq,cluster" 5q22.1 "praja 2, RING-H2 motif containing" 4416 rs246669 PCDHB4 56131 5 140483421 NM_018938 NP_061761 C/T T553A minus 24811105 1303 SEQUENOM CEPH CEPH (92) 184 0.18 123 by freq 5q31 protocadherin beta 4 4417 rs246679 PCDHB1 29930 5 140413573 NM_013340 NP_037472 C/G F778L minus 521335 1303 SEQUENOM CEPH CEPH (92) 92 0.03 98 by freq 5q31 protocadherin beta 1 4418 rs246703 PCDHB6 56130 5 140511930 NM_018939 NP_061762 C/G H636Q minus 1652768 1303 SEQUENOM CEPH CEPH (92) 92 0.46 121 by freq 5q31 protocadherin beta 6 4419 rs250430 APBB3 10307 5 139921412 NM_006051 NP_006042 C/T C238R minus 552176 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 1 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4420 rs250430 APBB3 10307 5 139921412 NM_006051 NP_006042 C/T C238R minus 552176 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 1 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4421 rs250430 APBB3 10307 5 139921412 NM_006051 NP_006042 C/T C238R minus 552176 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 24 0.04 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4422 rs250430 APBB3 10307 5 139921412 NM_006051 NP_006042 C/T C238R minus 552176 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.17 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4423 rs250430 APBB3 10307 5 139921412 NM_006051 NP_006042 C/T C238R minus 552176 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4424 rs250430 APBB3 10307 5 139921412 NM_006051 NP_006042 C/T C238R minus 24666978 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4425 rs250430 APBB3 10307 5 139921412 NM_006051 NP_006042 C/T C238R minus 24666978 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.05 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4426 rs250430 APBB3 10307 5 139921412 NM_006051 NP_006042 C/T C238R minus 24666978 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.06 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4427 rs250430 APBB3 10307 5 139921412 NM_133172 NP_573418 C/T C236R minus 552176 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 1 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4428 rs250430 APBB3 10307 5 139921412 NM_133172 NP_573418 C/T C236R minus 552176 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 1 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4429 rs250430 APBB3 10307 5 139921412 NM_133172 NP_573418 C/T C236R minus 552176 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 24 0.04 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4430 rs250430 APBB3 10307 5 139921412 NM_133172 NP_573418 C/T C236R minus 552176 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.17 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4431 rs250430 APBB3 10307 5 139921412 NM_133172 NP_573418 C/T C236R minus 552176 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4432 rs250430 APBB3 10307 5 139921412 NM_133172 NP_573418 C/T C236R minus 24666978 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4433 rs250430 APBB3 10307 5 139921412 NM_133172 NP_573418 C/T C236R minus 24666978 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.05 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4434 rs250430 APBB3 10307 5 139921412 NM_133172 NP_573418 C/T C236R minus 24666978 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.06 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4435 rs250430 APBB3 10307 5 139921412 NM_133173 NP_573419 C/T C231R minus 552176 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 1 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4436 rs250430 APBB3 10307 5 139921412 NM_133173 NP_573419 C/T C231R minus 552176 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 1 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4437 rs250430 APBB3 10307 5 139921412 NM_133173 NP_573419 C/T C231R minus 552176 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 24 0.04 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4438 rs250430 APBB3 10307 5 139921412 NM_133173 NP_573419 C/T C231R minus 552176 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.17 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4439 rs250430 APBB3 10307 5 139921412 NM_133173 NP_573419 C/T C231R minus 552176 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4440 rs250430 APBB3 10307 5 139921412 NM_133173 NP_573419 C/T C231R minus 24666978 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4441 rs250430 APBB3 10307 5 139921412 NM_133173 NP_573419 C/T C231R minus 24666978 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.05 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4442 rs250430 APBB3 10307 5 139921412 NM_133173 NP_573419 C/T C231R minus 24666978 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.06 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4443 rs250430 APBB3 10307 5 139921412 NM_133174 NP_573420 C/T C229R minus 552176 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 1 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4444 rs250430 APBB3 10307 5 139921412 NM_133174 NP_573420 C/T C229R minus 552176 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 1 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4445 rs250430 APBB3 10307 5 139921412 NM_133174 NP_573420 C/T C229R minus 552176 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 24 0.04 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4446 rs250430 APBB3 10307 5 139921412 NM_133174 NP_573420 C/T C229R minus 552176 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.17 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4447 rs250430 APBB3 10307 5 139921412 NM_133174 NP_573420 C/T C229R minus 552176 1303 SEQUENOM CEPH CEPH (92) 92 0.27 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4448 rs250430 APBB3 10307 5 139921412 NM_133174 NP_573420 C/T C229R minus 24666978 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4449 rs250430 APBB3 10307 5 139921412 NM_133174 NP_573420 C/T C229R minus 24666978 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.05 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4450 rs250430 APBB3 10307 5 139921412 NM_133174 NP_573420 C/T C229R minus 24666978 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.06 123 "by cluster,freq" 5q31 "amyloid beta (A4) precursor protein-binding, family B, member 3" 4451 rs251353 PCDHA9 9752 5 140208348 NM_014005 NP_054724 G/T S28R minus 545755 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.46 87 by freq 5q31 protocadherin alpha 9 4452 rs251353 PCDHA9 9752 5 140208348 NM_014005 NP_054724 G/T S28R minus 545755 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.25 87 by freq 5q31 protocadherin alpha 9 4453 rs251353 PCDHA9 9752 5 140208348 NM_014005 NP_054724 G/T S28R minus 545755 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.36 87 by freq 5q31 protocadherin alpha 9 4454 rs251353 PCDHA9 9752 5 140208348 NM_014005 NP_054724 G/T S28R minus 545755 1303 SEQUENOM CEPH CEPH (92) 92 0.44 87 by freq 5q31 protocadherin alpha 9 4455 rs251353 PCDHA9 9752 5 140208348 NM_031857 NP_114063 G/T S28R minus 545755 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.46 87 by freq 5q31 protocadherin alpha 9 4456 rs251353 PCDHA9 9752 5 140208348 NM_031857 NP_114063 G/T S28R minus 545755 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.25 87 by freq 5q31 protocadherin alpha 9 4457 rs251353 PCDHA9 9752 5 140208348 NM_031857 NP_114063 G/T S28R minus 545755 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.36 87 by freq 5q31 protocadherin alpha 9 4458 rs251353 PCDHA9 9752 5 140208348 NM_031857 NP_114063 G/T S28R minus 545755 1303 SEQUENOM CEPH CEPH (92) 92 0.44 87 by freq 5q31 protocadherin alpha 9 4459 rs251354 PCDHA9 9752 5 140209270 NM_014005 NP_054724 C/G L336V minus 531336 1303 SEQUENOM CEPH CEPH (92) 92 0.13 121 "by doubleHit,freq,cluster" 5q31 protocadherin alpha 9 4460 rs251354 PCDHA9 9752 5 140209270 NM_031857 NP_114063 C/G L336V minus 531336 1303 SEQUENOM CEPH CEPH (92) 92 0.13 121 "by doubleHit,freq,cluster" 5q31 protocadherin alpha 9 4461 rs251355 PCDHA9 9752 5 140209552 NM_014005 NP_054724 C/G G430R minus 608604 1303 SEQUENOM CEPH CEPH (92) 92 0.34 121 "by doubleHit,freq,cluster" 5q31 protocadherin alpha 9 4462 rs251355 PCDHA9 9752 5 140209552 NM_031857 NP_114063 C/G G430R minus 608604 1303 SEQUENOM CEPH CEPH (92) 92 0.34 121 "by doubleHit,freq,cluster" 5q31 protocadherin alpha 9 4463 rs251362 PCDHA10 56139 5 140217134 NM_018901 NP_061724 C/G S439R minus 502570 1303 SEQUENOM CEPH CEPH (92) 92 0.35 108 "by doubleHit,freq,cluster" 5q31 protocadherin alpha 10 4464 rs251362 PCDHA10 56139 5 140217134 NM_018901 NP_061724 C/G S439R minus 4919697 738 YUSUKE JBIC-ALLELE Japanese (752) 1468 0.49 108 "by doubleHit,freq,cluster" 5q31 protocadherin alpha 10 4465 rs251362 PCDHA10 56139 5 140217134 NM_031859 NP_114065 C/G S439R minus 502570 1303 SEQUENOM CEPH CEPH (92) 92 0.35 108 "by doubleHit,freq,cluster" 5q31 protocadherin alpha 10 4466 rs251362 PCDHA10 56139 5 140217134 NM_031859 NP_114065 C/G S439R minus 4919697 738 YUSUKE JBIC-ALLELE Japanese (752) 1468 0.49 108 "by doubleHit,freq,cluster" 5q31 protocadherin alpha 10 4467 rs251362 PCDHA10 56139 5 140217134 NM_031860 NP_114066 C/G S439R minus 502570 1303 SEQUENOM CEPH CEPH (92) 92 0.35 108 "by doubleHit,freq,cluster" 5q31 protocadherin alpha 10 4468 rs251362 PCDHA10 56139 5 140217134 NM_031860 NP_114066 C/G S439R minus 4919697 738 YUSUKE JBIC-ALLELE Japanese (752) 1468 0.49 108 "by doubleHit,freq,cluster" 5q31 protocadherin alpha 10 4469 rs251364 PCDHA10 56139 5 140217571 NM_018901 NP_061724 A/C V585G minus 487243 1303 SEQUENOM CEPH CEPH (92) 92 0.23 119 "by doubleHit,freq,cluster" 5q31 protocadherin alpha 10 4470 rs251364 PCDHA10 56139 5 140217571 NM_031859 NP_114065 A/C V585G minus 487243 1303 SEQUENOM CEPH CEPH (92) 92 0.23 119 "by doubleHit,freq,cluster" 5q31 protocadherin alpha 10 4471 rs252579 EMR4 326342 19 6923357 XM_377506 XP_377506 C/T R167H plus 328019 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.18 123 "HapMap,submitter,freq" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 4" 4472 rs252579 EMR4 326342 19 6923357 XM_377506 XP_377506 C/T R167H plus 24682498 1371 PERLEGEN AFD_EUR_PANEL European American (24) 42 0.29 123 "HapMap,submitter,freq" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 4" 4473 rs252579 EMR4 326342 19 6923357 XM_377506 XP_377506 C/T R167H plus 24682498 1372 PERLEGEN AFD_AFR_PANEL African American (24) 42 0.17 123 "HapMap,submitter,freq" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 4" 4474 rs252579 EMR4 326342 19 6923357 XM_377506 XP_377506 C/T R167H plus 24682498 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 40 0.15 123 "HapMap,submitter,freq" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 4" 4475 rs254460 TRIM7 81786 5 180555221 NM_203293 NP_976038 A/G G363S minus 5247534 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.14 119 "HapMap,doubleHit,freq,cluster" 5q35.3 tripartite motif-containing 7 4476 rs254460 TRIM7 81786 5 180555221 NM_203294 NP_976039 A/G G155S minus 5247534 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.14 119 "HapMap,doubleHit,freq,cluster" 5q35.3 tripartite motif-containing 7 4477 rs254460 TRIM7 81786 5 180555221 NM_203295 NP_976040 A/G G155S minus 5247534 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.14 119 "HapMap,doubleHit,freq,cluster" 5q35.3 tripartite motif-containing 7 4478 rs254460 TRIM7 81786 5 180555221 NM_203296 NP_976041 A/G G155S minus 5247534 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.14 119 "HapMap,doubleHit,freq,cluster" 5q35.3 tripartite motif-containing 7 4479 rs254460 TRIM7 81786 5 180555221 NM_203297 NP_976042 A/G G181S minus 5247534 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.14 119 "HapMap,doubleHit,freq,cluster" 5q35.3 tripartite motif-containing 7 4480 rs259028 ZFYVE16 9765 5 79770053 NM_014733 NP_055548 C/T I598T plus 2228689 638 TSC-CSHL TSC_42_AA TSC African American (42) 82 0.28 123 "HapMap,submitter,freq,cluster" 5p15.2-q14.3 "zinc finger, FYVE domain containing 16" 4481 rs259028 ZFYVE16 9765 5 79770053 NM_014733 NP_055548 C/T I598T plus 2228689 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 76 0.05 123 "HapMap,submitter,freq,cluster" 5p15.2-q14.3 "zinc finger, FYVE domain containing 16" 4482 rs259028 ZFYVE16 9765 5 79770053 NM_014733 NP_055548 C/T I598T plus 2228689 640 TSC-CSHL TSC_42_A TSC Asian (42) 48 0.1 123 "HapMap,submitter,freq,cluster" 5p15.2-q14.3 "zinc finger, FYVE domain containing 16" 4483 rs259028 ZFYVE16 9765 5 79770053 NM_014733 NP_055548 C/T I598T plus 2228689 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.03 123 "HapMap,submitter,freq,cluster" 5p15.2-q14.3 "zinc finger, FYVE domain containing 16" 4484 rs259028 ZFYVE16 9765 5 79770053 NM_014733 NP_055548 C/T I598T plus 2228689 1303 SEQUENOM CEPH CEPH (92) 92 0.03 123 "HapMap,submitter,freq,cluster" 5p15.2-q14.3 "zinc finger, FYVE domain containing 16" 4485 rs259028 ZFYVE16 9765 5 79770053 NM_014733 NP_055548 C/T I598T plus 23399732 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.02 123 "HapMap,submitter,freq,cluster" 5p15.2-q14.3 "zinc finger, FYVE domain containing 16" 4486 rs259028 ZFYVE16 9765 5 79770053 NM_014733 NP_055548 C/T I598T plus 23399732 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.3 123 "HapMap,submitter,freq,cluster" 5p15.2-q14.3 "zinc finger, FYVE domain containing 16" 4487 rs259028 ZFYVE16 9765 5 79770053 NM_014733 NP_055548 C/T I598T plus 23399732 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.11 123 "HapMap,submitter,freq,cluster" 5p15.2-q14.3 "zinc finger, FYVE domain containing 16" 4488 rs259358 RWDD3 25950 1 95421842 NM_015485 NP_056300 C/T V47A plus 807556 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 123 "by cluster,freq" 1p22.1 RWD domain containing 3 4489 rs259358 RWDD3 25950 1 95421842 NM_015485 NP_056300 C/T V47A plus 807556 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 1 123 "by cluster,freq" 1p22.1 RWD domain containing 3 4490 rs259358 RWDD3 25950 1 95421842 NM_015485 NP_056300 C/T V47A plus 807556 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 123 "by cluster,freq" 1p22.1 RWD domain containing 3 4491 rs259358 RWDD3 25950 1 95421842 NM_015485 NP_056300 C/T V47A plus 807556 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 1 123 "by cluster,freq" 1p22.1 RWD domain containing 3 4492 rs259358 RWDD3 25950 1 95421842 NM_015485 NP_056300 C/T V47A plus 807556 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.13 123 "by cluster,freq" 1p22.1 RWD domain containing 3 4493 rs259358 RWDD3 25950 1 95421842 NM_015485 NP_056300 C/T V47A plus 807556 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 12 1 123 "by cluster,freq" 1p22.1 RWD domain containing 3 4494 rs259358 RWDD3 25950 1 95421842 NM_015485 NP_056300 C/T V47A plus 807556 1303 SEQUENOM CEPH CEPH (92) 92 1 123 "by cluster,freq" 1p22.1 RWD domain containing 3 4495 rs260462 ZNF544 27300 19 63465883 NM_014480 NP_055295 A/G Q700R plus 540180 771 TSC-CSHL SC_12_A CORIELL Asian (12) 22 0.41 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.43 zinc finger protein 544 4496 rs260462 ZNF544 27300 19 63465883 NM_014480 NP_055295 A/G Q700R plus 540180 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 20 0.45 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.43 zinc finger protein 544 4497 rs260462 ZNF544 27300 19 63465883 NM_014480 NP_055295 A/G Q700R plus 540180 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 8 0.38 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.43 zinc finger protein 544 4498 rs260462 ZNF544 27300 19 63465883 NM_014480 NP_055295 A/G Q700R plus 540180 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 46 0.5 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.43 zinc finger protein 544 4499 rs260462 ZNF544 27300 19 63465883 NM_014480 NP_055295 A/G Q700R plus 540180 885 TSC-CSHL HapMap-CEPH-30-trios 114 0.45 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.43 zinc finger protein 544 4500 rs260462 ZNF544 27300 19 63465883 NM_014480 NP_055295 A/G Q700R plus 540180 1303 SEQUENOM CEPH CEPH (92) 92 0.44 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.43 zinc finger protein 544 4501 rs260462 ZNF544 27300 19 63465883 NM_014480 NP_055295 A/G Q700R plus 5013158 738 YUSUKE JBIC-ALLELE Japanese (752) 1502 0.41 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.43 zinc finger protein 544 4502 rs260462 ZNF544 27300 19 63465883 NM_014480 NP_055295 A/G Q700R plus 24536462 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.48 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.43 zinc finger protein 544 4503 rs260462 ZNF544 27300 19 63465883 NM_014480 NP_055295 A/G Q700R plus 24536462 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.43 zinc finger protein 544 4504 rs260462 ZNF544 27300 19 63465883 NM_014480 NP_055295 A/G Q700R plus 24536462 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.4 123 "HapMap,doubleHit,submitter,freq,cluster" 19q13.43 zinc finger protein 544 4505 rs265771 CNTN6 27255 3 1346573 NM_014461 NP_055276 G/T A440S plus 1895836 885 TSC-CSHL HapMap-CEPH-30-trios 114 1 123 "HapMap,submitter,freq,cluster" 3p26-p25 contactin 6 4506 rs265771 CNTN6 27255 3 1346573 NM_014461 NP_055276 G/T A440S plus 23171948 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "HapMap,submitter,freq,cluster" 3p26-p25 contactin 6 4507 rs265771 CNTN6 27255 3 1346573 NM_014461 NP_055276 G/T A440S plus 23171948 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "HapMap,submitter,freq,cluster" 3p26-p25 contactin 6 4508 rs265771 CNTN6 27255 3 1346573 NM_014461 NP_055276 G/T A440S plus 23171948 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,submitter,freq,cluster" 3p26-p25 contactin 6 4509 rs266472 HIPK3 10114 11 33316957 NM_005734 NP_005725 C/T V474I minus 608425 885 TSC-CSHL HapMap-CEPH-30-trios 118 1 87 "HapMap,doubleHit" 11p13 homeodomain interacting protein kinase 3 4510 rs266472 HIPK3 10114 11 33316957 NM_005734 NP_005725 C/T V474I minus 608425 1303 SEQUENOM CEPH CEPH (92) 92 1 87 "HapMap,doubleHit" 11p13 homeodomain interacting protein kinase 3 4511 rs266880 KLK3 354 19 56050283 NM_145864 NP_665863 C/G P87R plus 2041378 1303 SEQUENOM CEPH CEPH (92) 92 0.45 120 "by doubleHit,freq,cluster" 19q13.41 "kallikrein 3, (prostate specific antigen)" 4512 rs266880 KLK3 354 19 56050283 NM_145864 NP_665863 C/G P87R plus 3234760 738 YUSUKE JBIC-ALLELE Japanese (752) 1494 0.2 120 "by doubleHit,freq,cluster" 19q13.41 "kallikrein 3, (prostate specific antigen)" 4513 rs267561 ITGA9 3680 3 37549955 NM_002207 NP_002198 C/T G507E minus 1490039 1303 SEQUENOM CEPH CEPH (92) 92 0.49 123 "by doubleHit,submitter,freq,cluster" 3p21.3 "integrin, alpha 9" 4514 rs267561 ITGA9 3680 3 37549955 NM_002207 NP_002198 C/T G507E minus 23257496 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.44 123 "by doubleHit,submitter,freq,cluster" 3p21.3 "integrin, alpha 9" 4515 rs267561 ITGA9 3680 3 37549955 NM_002207 NP_002198 C/T G507E minus 23257496 1372 PERLEGEN AFD_AFR_PANEL African American (24) 23 0.5 123 "by doubleHit,submitter,freq,cluster" 3p21.3 "integrin, alpha 9" 4516 rs267561 ITGA9 3680 3 37549955 NM_002207 NP_002198 C/T G507E minus 23257496 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.19 123 "by doubleHit,submitter,freq,cluster" 3p21.3 "integrin, alpha 9" 4517 rs267733 ANXA9 8416 1 147771909 NM_003568 NP_003559 A/G D159G plus 751296 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 16 0.06 123 "by cluster,freq" 1q21 annexin A9 4518 rs267733 ANXA9 8416 1 147771909 NM_003568 NP_003559 A/G D159G plus 751296 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.07 123 "by cluster,freq" 1q21 annexin A9 4519 rs267733 ANXA9 8416 1 147771909 NM_003568 NP_003559 A/G D159G plus 5281223 1303 SEQUENOM CEPH CEPH (92) 92 0.11 123 "by cluster,freq" 1q21 annexin A9 4520 rs267733 ANXA9 8416 1 147771909 NM_003568 NP_003559 A/G D159G plus 24277601 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.13 123 "by cluster,freq" 1q21 annexin A9 4521 rs267733 ANXA9 8416 1 147771909 NM_003568 NP_003559 A/G D159G plus 24277601 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "by cluster,freq" 1q21 annexin A9 4522 rs267733 ANXA9 8416 1 147771909 NM_003568 NP_003559 A/G D159G plus 24277601 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 1q21 annexin A9 4523 rs268671 PRX 57716 19 45593454 NM_181882 NP_870998 C/T V882A minus 599856 771 TSC-CSHL SC_12_A CORIELL Asian (12) 22 0.18 121 "by doubleHit,freq,cluster" 19q13.13-q13.2 periaxin 4524 rs268671 PRX 57716 19 45593454 NM_181882 NP_870998 C/T V882A minus 599856 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.29 121 "by doubleHit,freq,cluster" 19q13.13-q13.2 periaxin 4525 rs268671 PRX 57716 19 45593454 NM_181882 NP_870998 C/T V882A minus 599856 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.29 121 "by doubleHit,freq,cluster" 19q13.13-q13.2 periaxin 4526 rs268671 PRX 57716 19 45593454 NM_181882 NP_870998 C/T V882A minus 599856 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 88 0.19 121 "by doubleHit,freq,cluster" 19q13.13-q13.2 periaxin 4527 rs268671 PRX 57716 19 45593454 NM_181882 NP_870998 C/T V882A minus 599856 1303 SEQUENOM CEPH CEPH (92) 92 0.45 121 "by doubleHit,freq,cluster" 19q13.13-q13.2 periaxin 4528 rs268673 PRX 57716 19 45593336 NM_181882 NP_870998 A/G I921M minus 508093 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.4 121 "HapMap,submitter,freq,cluster" 19q13.13-q13.2 periaxin 4529 rs268673 PRX 57716 19 45593336 NM_181882 NP_870998 A/G I921M minus 508093 1303 SEQUENOM CEPH CEPH (92) 92 0.22 121 "HapMap,submitter,freq,cluster" 19q13.13-q13.2 periaxin 4530 rs268674 PRX 57716 19 45592705 NM_181882 NP_870998 A/G G1132R minus 528679 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.05 123 "HapMap,freq,cluster" 19q13.13-q13.2 periaxin 4531 rs268674 PRX 57716 19 45592705 NM_181882 NP_870998 A/G G1132R minus 4931211 738 YUSUKE JBIC-ALLELE Japanese (752) 1504 0.02 123 "HapMap,freq,cluster" 19q13.13-q13.2 periaxin 4532 rs268674 PRX 57716 19 45592705 NM_181882 NP_870998 A/G G1132R minus 24595982 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.13 123 "HapMap,freq,cluster" 19q13.13-q13.2 periaxin 4533 rs268674 PRX 57716 19 45592705 NM_181882 NP_870998 A/G G1132R minus 24595982 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "HapMap,freq,cluster" 19q13.13-q13.2 periaxin 4534 rs268674 PRX 57716 19 45592705 NM_181882 NP_870998 A/G G1132R minus 24595982 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,freq,cluster" 19q13.13-q13.2 periaxin 4535 rs268687 SERTAD1 29950 19 45621203 NM_013376 NP_037508 A/G T31A minus 5605956 693 EGP_SNPS PDR90 NIHPDR 146 0.44 123 "HapMap,doubleHit,freq,cluster" 19q13.1-q13.2 SERTA domain containing 1 4536 rs268687 SERTAD1 29950 19 45621203 NM_013376 NP_037508 A/G T31A minus 5605956 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.48 123 "HapMap,doubleHit,freq,cluster" 19q13.1-q13.2 SERTA domain containing 1 4537 rs268687 SERTAD1 29950 19 45621203 NM_013376 NP_037508 A/G T31A minus 14702240 1303 SEQUENOM CEPH CEPH (92) 92 0.46 123 "HapMap,doubleHit,freq,cluster" 19q13.1-q13.2 SERTA domain containing 1 4538 rs268687 SERTAD1 29950 19 45621203 NM_013376 NP_037508 A/G T31A minus 24577779 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.48 123 "HapMap,doubleHit,freq,cluster" 19q13.1-q13.2 SERTA domain containing 1 4539 rs268687 SERTAD1 29950 19 45621203 NM_013376 NP_037508 A/G T31A minus 24577779 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.2 123 "HapMap,doubleHit,freq,cluster" 19q13.1-q13.2 SERTA domain containing 1 4540 rs268687 SERTAD1 29950 19 45621203 NM_013376 NP_037508 A/G T31A minus 24577779 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.23 123 "HapMap,doubleHit,freq,cluster" 19q13.1-q13.2 SERTA domain containing 1 4541 rs269868 DUOX2 50506 15 43179367 NM_014080 NP_054799 C/T S1067L minus 2032138 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.02 123 "HapMap,doubleHit,submitter,freq,cluster" 15q15.3 dual oxidase 2 4542 rs269868 DUOX2 50506 15 43179367 NM_014080 NP_054799 C/T S1067L minus 23462795 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.06 123 "HapMap,doubleHit,submitter,freq,cluster" 15q15.3 dual oxidase 2 4543 rs269868 DUOX2 50506 15 43179367 NM_014080 NP_054799 C/T S1067L minus 23462795 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.37 123 "HapMap,doubleHit,submitter,freq,cluster" 15q15.3 dual oxidase 2 4544 rs269868 DUOX2 50506 15 43179367 NM_014080 NP_054799 C/T S1067L minus 23462795 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.04 123 "HapMap,doubleHit,submitter,freq,cluster" 15q15.3 dual oxidase 2 4545 rs270771 ILT10 79166 19 59912438 NM_024317 NP_077293 C/T A104V plus 597044 885 TSC-CSHL HapMap-CEPH-30-trios 116 0.06 100 "HapMap,freq" 19q13.4 "leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 5" 4546 rs270771 ILT10 79166 19 59912438 NM_024317 NP_077293 C/T A104V plus 597044 1303 SEQUENOM CEPH CEPH (92) 92 0.21 100 "HapMap,freq" 19q13.4 "leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 5" 4547 rs272128 GPR148 344561 2 131321392 NM_207364 NP_997247 G/T P317T minus 1933208 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 100 "HapMap,submitter,freq" 2q21.2 G protein-coupled receptor 148 4548 rs272128 GPR148 344561 2 131321392 NM_207364 NP_997247 G/T P317T minus 1933208 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.05 100 "HapMap,submitter,freq" 2q21.2 G protein-coupled receptor 148 4549 rs272128 GPR148 344561 2 131321392 NM_207364 NP_997247 G/T P317T minus 1933208 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 100 "HapMap,submitter,freq" 2q21.2 G protein-coupled receptor 148 4550 rs272128 GPR148 344561 2 131321392 NM_207364 NP_997247 G/T P317T minus 1933208 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.05 100 "HapMap,submitter,freq" 2q21.2 G protein-coupled receptor 148 4551 rs272128 GPR148 344561 2 131321392 NM_207364 NP_997247 G/T P317T minus 1933208 1303 SEQUENOM CEPH CEPH (92) 92 0.3 100 "HapMap,submitter,freq" 2q21.2 G protein-coupled receptor 148 4552 rs272128 GPR148 344561 2 131321392 NM_207364 NP_997247 G/T P317T minus 3603022 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 100 "HapMap,submitter,freq" 2q21.2 G protein-coupled receptor 148 4553 rs272128 GPR148 344561 2 131321392 NM_207364 NP_997247 G/T P317T minus 3603022 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.05 100 "HapMap,submitter,freq" 2q21.2 G protein-coupled receptor 148 4554 rs272128 GPR148 344561 2 131321392 NM_207364 NP_997247 G/T P317T minus 3603022 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 100 "HapMap,submitter,freq" 2q21.2 G protein-coupled receptor 148 4555 rs272893 SLC22A4 6583 5 131690961 NM_003059 NP_003050 A/G I306T minus 16339642 1141 PHARMGKB_PMT PA129593643 552 0.37 121 "by doubleHit,freq,cluster" 5q31.1 "solute carrier family 22 (organic cation transporter), member 4" 4556 rs276937 DSC3 1825 18 26865059 NM_001941 NP_001932 A/T S78T minus 1934382 1303 SEQUENOM CEPH CEPH (92) 92 0.31 123 by freq 18q12.1 desmocollin 3 4557 rs276937 DSC3 1825 18 26865059 NM_001941 NP_001932 A/T S78T minus 24197210 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.24 123 by freq 18q12.1 desmocollin 3 4558 rs276937 DSC3 1825 18 26865059 NM_001941 NP_001932 A/T S78T minus 24197210 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.2 123 by freq 18q12.1 desmocollin 3 4559 rs276937 DSC3 1825 18 26865059 NM_001941 NP_001932 A/T S78T minus 24197210 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 by freq 18q12.1 desmocollin 3 4560 rs276937 DSC3 1825 18 26865059 NM_024423 NP_077741 A/T S78T minus 1934382 1303 SEQUENOM CEPH CEPH (92) 92 0.31 123 by freq 18q12.1 desmocollin 3 4561 rs276937 DSC3 1825 18 26865059 NM_024423 NP_077741 A/T S78T minus 24197210 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.24 123 by freq 18q12.1 desmocollin 3 4562 rs276937 DSC3 1825 18 26865059 NM_024423 NP_077741 A/T S78T minus 24197210 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.2 123 by freq 18q12.1 desmocollin 3 4563 rs276937 DSC3 1825 18 26865059 NM_024423 NP_077741 A/T S78T minus 24197210 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 by freq 18q12.1 desmocollin 3 4564 rs276938 DSC3 1825 18 26864986 NM_001941 NP_001932 A/G R102K minus 1934383 1303 SEQUENOM CEPH CEPH (92) 92 0.41 120 "by doubleHit,freq,cluster" 18q12.1 desmocollin 3 4565 rs276938 DSC3 1825 18 26864986 NM_024423 NP_077741 A/G R102K minus 1934383 1303 SEQUENOM CEPH CEPH (92) 92 0.41 120 "by doubleHit,freq,cluster" 18q12.1 desmocollin 3 4566 rs280528 CDC37 11140 19 10363285 NM_007065 NP_008996 C/T G360E plus 736423 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 98 HapMap 19p13.2 CDC37 cell division cycle 37 homolog (S. cerevisiae) 4567 rs280528 CDC37 11140 19 10363285 NM_007065 NP_008996 C/T G360E plus 736423 1303 SEQUENOM CEPH CEPH (92) 92 1 98 HapMap 19p13.2 CDC37 cell division cycle 37 homolog (S. cerevisiae) 4568 rs282129 GABRR2 2570 6 90024217 NM_002043 NP_002034 C/T T430M minus 365706 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.13 123 "by doubleHit,submitter,freq,cluster" 6q13-q16.3 "gamma-aminobutyric acid (GABA) receptor, rho 2" 4569 rs282129 GABRR2 2570 6 90024217 NM_002043 NP_002034 C/T T430M minus 365706 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 12 0.42 123 "by doubleHit,submitter,freq,cluster" 6q13-q16.3 "gamma-aminobutyric acid (GABA) receptor, rho 2" 4570 rs282129 GABRR2 2570 6 90024217 NM_002043 NP_002034 C/T T430M minus 1347572 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.13 123 "by doubleHit,submitter,freq,cluster" 6q13-q16.3 "gamma-aminobutyric acid (GABA) receptor, rho 2" 4571 rs282129 GABRR2 2570 6 90024217 NM_002043 NP_002034 C/T T430M minus 1347572 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 20 0.45 123 "by doubleHit,submitter,freq,cluster" 6q13-q16.3 "gamma-aminobutyric acid (GABA) receptor, rho 2" 4572 rs282129 GABRR2 2570 6 90024217 NM_002043 NP_002034 C/T T430M minus 1347572 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 10 0.3 123 "by doubleHit,submitter,freq,cluster" 6q13-q16.3 "gamma-aminobutyric acid (GABA) receptor, rho 2" 4573 rs282129 GABRR2 2570 6 90024217 NM_002043 NP_002034 C/T T430M minus 1347572 1303 SEQUENOM CEPH CEPH (92) 92 0.12 123 "by doubleHit,submitter,freq,cluster" 6q13-q16.3 "gamma-aminobutyric acid (GABA) receptor, rho 2" 4574 rs282129 GABRR2 2570 6 90024217 NM_002043 NP_002034 C/T T430M minus 3208995 738 YUSUKE JBIC-ALLELE Japanese (752) 1082 0.12 123 "by doubleHit,submitter,freq,cluster" 6q13-q16.3 "gamma-aminobutyric acid (GABA) receptor, rho 2" 4575 rs282129 GABRR2 2570 6 90024217 NM_002043 NP_002034 C/T T430M minus 23373594 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "by doubleHit,submitter,freq,cluster" 6q13-q16.3 "gamma-aminobutyric acid (GABA) receptor, rho 2" 4576 rs282129 GABRR2 2570 6 90024217 NM_002043 NP_002034 C/T T430M minus 23373594 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.41 123 "by doubleHit,submitter,freq,cluster" 6q13-q16.3 "gamma-aminobutyric acid (GABA) receptor, rho 2" 4577 rs282129 GABRR2 2570 6 90024217 NM_002043 NP_002034 C/T T430M minus 23373594 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.15 123 "by doubleHit,submitter,freq,cluster" 6q13-q16.3 "gamma-aminobutyric acid (GABA) receptor, rho 2" 4578 rs282414 RGNEF 64283 5 73272436 XM_371755 XP_371755 A/G S1644P minus 743533 885 TSC-CSHL HapMap-CEPH-30-trios 118 1 123 "HapMap,doubleHit,freq,cluster" 5q13.3 Rho-guanine nucleotide exchange factor 4579 rs282414 RGNEF 64283 5 73272436 XM_371755 XP_371755 A/G S1644P minus 3217024 738 YUSUKE JBIC-ALLELE Japanese (752) 1490 0.2 123 "HapMap,doubleHit,freq,cluster" 5q13.3 Rho-guanine nucleotide exchange factor 4580 rs282414 RGNEF 64283 5 73272436 XM_371755 XP_371755 A/G S1644P minus 24186172 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 1 123 "HapMap,doubleHit,freq,cluster" 5q13.3 Rho-guanine nucleotide exchange factor 4581 rs282414 RGNEF 64283 5 73272436 XM_371755 XP_371755 A/G S1644P minus 24186172 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "HapMap,doubleHit,freq,cluster" 5q13.3 Rho-guanine nucleotide exchange factor 4582 rs282414 RGNEF 64283 5 73272436 XM_371755 XP_371755 A/G S1644P minus 24186172 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.11 123 "HapMap,doubleHit,freq,cluster" 5q13.3 Rho-guanine nucleotide exchange factor 4583 rs283526 ATF5 22809 19 55127674 NM_012068 NP_036200 C/T P121L plus 2039819 1303 SEQUENOM CEPH CEPH (92) 92 0.02 120 "by doubleHit,freq,cluster" 19q13.3 activating transcription factor 5 4584 rs284662 B3GALT7 374907 19 46624115 NM_198540 NP_940942 A/G S137G minus 24570503 1371 PERLEGEN AFD_EUR_PANEL European American (24) 42 0.4 123 "by cluster,freq" 19q13.31 "UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 7" 4585 rs284662 B3GALT7 374907 19 46624115 NM_198540 NP_940942 A/G S137G minus 24570503 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.2 123 "by cluster,freq" 19q13.31 "UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 7" 4586 rs284662 B3GALT7 374907 19 46624115 NM_198540 NP_940942 A/G S137G minus 24570503 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 42 0.33 123 "by cluster,freq" 19q13.31 "UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 7" 4587 rs285584 PDZRN4 29951 12 40232806 NM_013377 NP_037509 A/G G171S plus 627828 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.13 123 "HapMap,doubleHit,submitter,freq,cluster" 12q12 PDZ domain containing RING finger 4 4588 rs285584 PDZRN4 29951 12 40232806 NM_013377 NP_037509 A/G G171S plus 23342080 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 "HapMap,doubleHit,submitter,freq,cluster" 12q12 PDZ domain containing RING finger 4 4589 rs285584 PDZRN4 29951 12 40232806 NM_013377 NP_037509 A/G G171S plus 23342080 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 12q12 PDZ domain containing RING finger 4 4590 rs285584 PDZRN4 29951 12 40232806 NM_013377 NP_037509 A/G G171S plus 23342080 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.06 123 "HapMap,doubleHit,submitter,freq,cluster" 12q12 PDZ domain containing RING finger 4 4591 rs288326 FRZB 2487 2 183528842 NM_001463 NP_001454 A/G R200W plus 3040053 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 0.04 123 "HapMap,doubleHit,submitter,freq,cluster" 2qter frizzled-related protein 4592 rs288326 FRZB 2487 2 183528842 NM_001463 NP_001454 A/G R200W plus 3040053 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.03 123 "HapMap,doubleHit,submitter,freq,cluster" 2qter frizzled-related protein 4593 rs288326 FRZB 2487 2 183528842 NM_001463 NP_001454 A/G R200W plus 3040053 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 0.05 123 "HapMap,doubleHit,submitter,freq,cluster" 2qter frizzled-related protein 4594 rs288326 FRZB 2487 2 183528842 NM_001463 NP_001454 A/G R200W plus 3040053 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.13 123 "HapMap,doubleHit,submitter,freq,cluster" 2qter frizzled-related protein 4595 rs288326 FRZB 2487 2 183528842 NM_001463 NP_001454 A/G R200W plus 3040053 901 AFFY AfAm 12 0.08 123 "HapMap,doubleHit,submitter,freq,cluster" 2qter frizzled-related protein 4596 rs288326 FRZB 2487 2 183528842 NM_001463 NP_001454 A/G R200W plus 3040053 902 AFFY Caucasian 24 0.13 123 "HapMap,doubleHit,submitter,freq,cluster" 2qter frizzled-related protein 4597 rs288326 FRZB 2487 2 183528842 NM_001463 NP_001454 A/G R200W plus 3040053 903 AFFY Asian 12 1 123 "HapMap,doubleHit,submitter,freq,cluster" 2qter frizzled-related protein 4598 rs288326 FRZB 2487 2 183528842 NM_001463 NP_001454 A/G R200W plus 3040053 904 AFFY CEPH 12 1 123 "HapMap,doubleHit,submitter,freq,cluster" 2qter frizzled-related protein 4599 rs288326 FRZB 2487 2 183528842 NM_001463 NP_001454 A/G R200W plus 3040053 905 AFFY PDpanel 46 0.07 123 "HapMap,doubleHit,submitter,freq,cluster" 2qter frizzled-related protein 4600 rs288326 FRZB 2487 2 183528842 NM_001463 NP_001454 A/G R200W plus 3040053 1303 SEQUENOM CEPH CEPH (92) 92 0.34 123 "HapMap,doubleHit,submitter,freq,cluster" 2qter frizzled-related protein 4601 rs288326 FRZB 2487 2 183528842 NM_001463 NP_001454 A/G R200W plus 23684641 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.07 123 "HapMap,doubleHit,submitter,freq,cluster" 2qter frizzled-related protein 4602 rs288326 FRZB 2487 2 183528842 NM_001463 NP_001454 A/G R200W plus 23684641 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.07 123 "HapMap,doubleHit,submitter,freq,cluster" 2qter frizzled-related protein 4603 rs288326 FRZB 2487 2 183528842 NM_001463 NP_001454 A/G R200W plus 23684641 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,doubleHit,submitter,freq,cluster" 2qter frizzled-related protein 4604 rs288334 DNAJC10 54431 2 183448053 NM_018981 NP_061854 A/C H646Q minus 24151124 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.26 123 "by doubleHit,submitter,freq,cluster" 2q32.1 "DnaJ (Hsp40) homolog, subfamily C, member 10" 4605 rs288334 DNAJC10 54431 2 183448053 NM_018981 NP_061854 A/C H646Q minus 24151124 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.2 123 "by doubleHit,submitter,freq,cluster" 2q32.1 "DnaJ (Hsp40) homolog, subfamily C, member 10" 4606 rs288334 DNAJC10 54431 2 183448053 NM_018981 NP_061854 A/C H646Q minus 24151124 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.48 123 "by doubleHit,submitter,freq,cluster" 2q32.1 "DnaJ (Hsp40) homolog, subfamily C, member 10" 4607 rs289723 NOD27 84166 16 55638029 NM_032206 NP_115582 G/T Q1105K minus 1420126 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.25 120 "HapMap,doubleHit,freq,cluster" 16q13 nucleotide-binding oligomerization domains 27 4608 rs291102 PIGR 5284 1 203494873 NM_002644 NP_002635 C/T A580V minus 1342427 1303 SEQUENOM CEPH CEPH (92) 92 0.07 100 "by doubleHit,submitter,freq,cluster" 1q31-q41 polymeric immunoglobulin receptor 4609 rs291102 PIGR 5284 1 203494873 NM_002644 NP_002635 C/T A580V minus 3211650 738 YUSUKE JBIC-ALLELE Japanese (752) 1494 0.16 100 "by doubleHit,submitter,freq,cluster" 1q31-q41 polymeric immunoglobulin receptor 4610 rs291466 HIBCH 26275 2 191009981 NM_014362 NP_055177 A/G M1T plus 1804774 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.45 123 "HapMap,doubleHit,submitter,freq,cluster" 2q32.3 3-hydroxyisobutyryl-Coenzyme A hydrolase 4611 rs291466 HIBCH 26275 2 191009981 NM_014362 NP_055177 A/G M1T plus 1804774 1303 SEQUENOM CEPH CEPH (92) 92 0.4 123 "HapMap,doubleHit,submitter,freq,cluster" 2q32.3 3-hydroxyisobutyryl-Coenzyme A hydrolase 4612 rs291466 HIBCH 26275 2 191009981 NM_014362 NP_055177 A/G M1T plus 4935044 738 YUSUKE JBIC-ALLELE Japanese (752) 1474 0.18 123 "HapMap,doubleHit,submitter,freq,cluster" 2q32.3 3-hydroxyisobutyryl-Coenzyme A hydrolase 4613 rs291466 HIBCH 26275 2 191009981 NM_014362 NP_055177 A/G M1T plus 23239379 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.43 123 "HapMap,doubleHit,submitter,freq,cluster" 2q32.3 3-hydroxyisobutyryl-Coenzyme A hydrolase 4614 rs291466 HIBCH 26275 2 191009981 NM_014362 NP_055177 A/G M1T plus 23239379 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "HapMap,doubleHit,submitter,freq,cluster" 2q32.3 3-hydroxyisobutyryl-Coenzyme A hydrolase 4615 rs291466 HIBCH 26275 2 191009981 NM_014362 NP_055177 A/G M1T plus 23239379 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.1 123 "HapMap,doubleHit,submitter,freq,cluster" 2q32.3 3-hydroxyisobutyryl-Coenzyme A hydrolase 4616 rs291466 HIBCH 26275 2 191009981 NM_198047 NP_932164 A/G M1T plus 1804774 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.45 123 "HapMap,doubleHit,submitter,freq,cluster" 2q32.3 3-hydroxyisobutyryl-Coenzyme A hydrolase 4617 rs291466 HIBCH 26275 2 191009981 NM_198047 NP_932164 A/G M1T plus 1804774 1303 SEQUENOM CEPH CEPH (92) 92 0.4 123 "HapMap,doubleHit,submitter,freq,cluster" 2q32.3 3-hydroxyisobutyryl-Coenzyme A hydrolase 4618 rs291466 HIBCH 26275 2 191009981 NM_198047 NP_932164 A/G M1T plus 4935044 738 YUSUKE JBIC-ALLELE Japanese (752) 1474 0.18 123 "HapMap,doubleHit,submitter,freq,cluster" 2q32.3 3-hydroxyisobutyryl-Coenzyme A hydrolase 4619 rs291466 HIBCH 26275 2 191009981 NM_198047 NP_932164 A/G M1T plus 23239379 1371 PERLEGEN AFD_EUR_PANEL European American (24) 46 0.43 123 "HapMap,doubleHit,submitter,freq,cluster" 2q32.3 3-hydroxyisobutyryl-Coenzyme A hydrolase 4620 rs291466 HIBCH 26275 2 191009981 NM_198047 NP_932164 A/G M1T plus 23239379 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.48 123 "HapMap,doubleHit,submitter,freq,cluster" 2q32.3 3-hydroxyisobutyryl-Coenzyme A hydrolase 4621 rs291466 HIBCH 26275 2 191009981 NM_198047 NP_932164 A/G M1T plus 23239379 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.1 123 "HapMap,doubleHit,submitter,freq,cluster" 2q32.3 3-hydroxyisobutyryl-Coenzyme A hydrolase 4622 rs297054 OR5D14 219436 11 55320352 XM_166877 XP_166877 G/T S249A plus 609048 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 121 "HapMap,doubleHit" 11q12.1 "olfactory receptor, family 5, subfamily D, member 14" 4623 rs297055 OR5D14 219436 11 55320476 XM_166877 XP_166877 C/T L290P plus 536293 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.23 120 "HapMap,doubleHit,freq" 11q12.1 "olfactory receptor, family 5, subfamily D, member 14" 4624 rs298104 K6HF 9119 12 51104771 NM_004693 NP_004684 A/C S485R minus 532884 771 TSC-CSHL SC_12_A CORIELL Asian (12) 16 0.38 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4625 rs298104 K6HF 9119 12 51104771 NM_004693 NP_004684 A/C S485R minus 532884 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 22 0.23 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4626 rs298104 K6HF 9119 12 51104771 NM_004693 NP_004684 A/C S485R minus 532884 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.36 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4627 rs298104 K6HF 9119 12 51104771 NM_004693 NP_004684 A/C S485R minus 532884 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 90 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4628 rs298104 K6HF 9119 12 51104771 NM_004693 NP_004684 A/C S485R minus 532884 885 TSC-CSHL HapMap-CEPH-30-trios 112 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4629 rs298104 K6HF 9119 12 51104771 NM_004693 NP_004684 A/C S485R minus 532884 1303 SEQUENOM CEPH CEPH (92) 92 0.33 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4630 rs298104 K6HF 9119 12 51104771 NM_004693 NP_004684 A/C S485R minus 24386122 1371 PERLEGEN AFD_EUR_PANEL European American (24) 40 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4631 rs298104 K6HF 9119 12 51104771 NM_004693 NP_004684 A/C S485R minus 24386122 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.18 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4632 rs298104 K6HF 9119 12 51104771 NM_004693 NP_004684 A/C S485R minus 24386122 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.27 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4633 rs298109 K6HF 9119 12 51114085 NM_004693 NP_004684 A/G R91G minus 3217752 738 YUSUKE JBIC-ALLELE Japanese (752) 1474 0.23 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4634 rs298109 K6HF 9119 12 51114085 NM_004693 NP_004684 A/G R91G minus 5366239 885 TSC-CSHL HapMap-CEPH-30-trios 114 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4635 rs298109 K6HF 9119 12 51114085 NM_004693 NP_004684 A/G R91G minus 5366239 1303 SEQUENOM CEPH CEPH (92) 92 0.36 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4636 rs298109 K6HF 9119 12 51114085 NM_004693 NP_004684 A/G R91G minus 24386312 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.4 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4637 rs298109 K6HF 9119 12 51114085 NM_004693 NP_004684 A/G R91G minus 24386312 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.24 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4638 rs298109 K6HF 9119 12 51114085 NM_004693 NP_004684 A/G R91G minus 24386312 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.27 123 "HapMap,doubleHit,submitter,freq,cluster" 12q13 cytokeratin type II 4639 rs299163 NALP11 204801 19 61013226 NM_145007 NP_659444 G/T A188S minus 24583560 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.08 123 "by cluster,freq" 19q13.43 "NACHT, leucine rich repeat and PYD containing 11" 4640 rs299163 NALP11 204801 19 61013226 NM_145007 NP_659444 G/T A188S minus 24583560 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by cluster,freq" 19q13.43 "NACHT, leucine rich repeat and PYD containing 11" 4641 rs299163 NALP11 204801 19 61013226 NM_145007 NP_659444 G/T A188S minus 24583560 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 19q13.43 "NACHT, leucine rich repeat and PYD containing 11" 4642 rs299284 HMMR 3161 5 162829228 NM_012484 NP_036616 C/T R92C plus 2402673 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.13 123 "HapMap,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4643 rs299284 HMMR 3161 5 162829228 NM_012484 NP_036616 C/T R92C plus 23331945 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.06 123 "HapMap,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4644 rs299284 HMMR 3161 5 162829228 NM_012484 NP_036616 C/T R92C plus 23331945 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "HapMap,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4645 rs299284 HMMR 3161 5 162829228 NM_012484 NP_036616 C/T R92C plus 23331945 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4646 rs299284 HMMR 3161 5 162829228 NM_012485 NP_036617 C/T R77C plus 2402673 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.13 123 "HapMap,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4647 rs299284 HMMR 3161 5 162829228 NM_012485 NP_036617 C/T R77C plus 23331945 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.06 123 "HapMap,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4648 rs299284 HMMR 3161 5 162829228 NM_012485 NP_036617 C/T R77C plus 23331945 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.09 123 "HapMap,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4649 rs299284 HMMR 3161 5 162829228 NM_012485 NP_036617 C/T R77C plus 23331945 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "HapMap,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4650 rs299290 HMMR 3161 5 162835094 NM_012484 NP_036616 C/T V368A plus 560525 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.24 123 "HapMap,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4651 rs299290 HMMR 3161 5 162835094 NM_012484 NP_036616 C/T V368A plus 560525 1303 SEQUENOM CEPH CEPH (92) 92 0.33 123 "HapMap,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4652 rs299290 HMMR 3161 5 162835094 NM_012484 NP_036616 C/T V368A plus 3228706 738 YUSUKE JBIC-ALLELE Japanese (752) 1104 0.44 123 "HapMap,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4653 rs299290 HMMR 3161 5 162835094 NM_012484 NP_036616 C/T V368A plus 23940132 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.23 123 "HapMap,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4654 rs299290 HMMR 3161 5 162835094 NM_012484 NP_036616 C/T V368A plus 23940132 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.26 123 "HapMap,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4655 rs299290 HMMR 3161 5 162835094 NM_012484 NP_036616 C/T V368A plus 23940132 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.46 123 "HapMap,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4656 rs299290 HMMR 3161 5 162835094 NM_012485 NP_036617 C/T V353A plus 560525 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.24 123 "HapMap,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4657 rs299290 HMMR 3161 5 162835094 NM_012485 NP_036617 C/T V353A plus 560525 1303 SEQUENOM CEPH CEPH (92) 92 0.33 123 "HapMap,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4658 rs299290 HMMR 3161 5 162835094 NM_012485 NP_036617 C/T V353A plus 3228706 738 YUSUKE JBIC-ALLELE Japanese (752) 1104 0.44 123 "HapMap,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4659 rs299290 HMMR 3161 5 162835094 NM_012485 NP_036617 C/T V353A plus 23940132 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.23 123 "HapMap,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4660 rs299290 HMMR 3161 5 162835094 NM_012485 NP_036617 C/T V353A plus 23940132 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.26 123 "HapMap,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4661 rs299290 HMMR 3161 5 162835094 NM_012485 NP_036617 C/T V353A plus 23940132 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.46 123 "HapMap,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4662 rs299295 HMMR 3161 5 162842294 NM_012484 NP_036616 C/T A484V plus 1317616 638 TSC-CSHL TSC_42_AA TSC African American (42) 74 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4663 rs299295 HMMR 3161 5 162842294 NM_012484 NP_036616 C/T A484V plus 1317616 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4664 rs299295 HMMR 3161 5 162842294 NM_012484 NP_036616 C/T A484V plus 1317616 640 TSC-CSHL TSC_42_A TSC Asian (42) 82 0.05 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4665 rs299295 HMMR 3161 5 162842294 NM_012484 NP_036616 C/T A484V plus 5157950 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.25 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4666 rs299295 HMMR 3161 5 162842294 NM_012484 NP_036616 C/T A484V plus 5157950 1303 SEQUENOM CEPH CEPH (92) 92 0.36 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4667 rs299295 HMMR 3161 5 162842294 NM_012484 NP_036616 C/T A484V plus 23332087 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.23 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4668 rs299295 HMMR 3161 5 162842294 NM_012484 NP_036616 C/T A484V plus 23332087 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4669 rs299295 HMMR 3161 5 162842294 NM_012484 NP_036616 C/T A484V plus 23332087 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.1 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4670 rs299295 HMMR 3161 5 162842294 NM_012485 NP_036617 C/T A469V plus 1317616 638 TSC-CSHL TSC_42_AA TSC African American (42) 74 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4671 rs299295 HMMR 3161 5 162842294 NM_012485 NP_036617 C/T A469V plus 1317616 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4672 rs299295 HMMR 3161 5 162842294 NM_012485 NP_036617 C/T A469V plus 1317616 640 TSC-CSHL TSC_42_A TSC Asian (42) 82 0.05 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4673 rs299295 HMMR 3161 5 162842294 NM_012485 NP_036617 C/T A469V plus 5157950 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.25 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4674 rs299295 HMMR 3161 5 162842294 NM_012485 NP_036617 C/T A469V plus 5157950 1303 SEQUENOM CEPH CEPH (92) 92 0.36 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4675 rs299295 HMMR 3161 5 162842294 NM_012485 NP_036617 C/T A469V plus 23332087 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.23 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4676 rs299295 HMMR 3161 5 162842294 NM_012485 NP_036617 C/T A469V plus 23332087 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.3 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4677 rs299295 HMMR 3161 5 162842294 NM_012485 NP_036617 C/T A469V plus 23332087 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.1 123 "HapMap,doubleHit,submitter,freq,cluster" 5q33.2-qter hyaluronan-mediated motility receptor (RHAMM) 4678 rs302453 NALP4 147945 19 61082049 NM_134444 NP_604393 A/T Q925L plus 515538 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.25 100 "HapMap,submitter,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 4" 4679 rs302453 NALP4 147945 19 61082049 NM_134444 NP_604393 A/T Q925L plus 515538 1303 SEQUENOM CEPH CEPH (92) 92 0.23 100 "HapMap,submitter,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 4" 4680 rs302453 NALP4 147945 19 61082049 NM_134444 NP_604393 A/T Q925L plus 3233088 738 YUSUKE JBIC-ALLELE Japanese (752) 1498 0.11 100 "HapMap,submitter,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 4" 4681 rs303997 NALP13 126204 19 61116255 NM_176810 NP_789780 C/T Q247R plus 1322888 638 TSC-CSHL TSC_42_AA TSC African American (42) 82 0.28 123 "by doubleHit,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 13" 4682 rs303997 NALP13 126204 19 61116255 NM_176810 NP_789780 C/T Q247R plus 1322888 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 82 0.38 123 "by doubleHit,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 13" 4683 rs303997 NALP13 126204 19 61116255 NM_176810 NP_789780 C/T Q247R plus 1322888 640 TSC-CSHL TSC_42_A TSC Asian (42) 74 0.24 123 "by doubleHit,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 13" 4684 rs303997 NALP13 126204 19 61116255 NM_176810 NP_789780 C/T Q247R plus 24689078 1371 PERLEGEN AFD_EUR_PANEL European American (24) 42 0.45 123 "by doubleHit,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 13" 4685 rs303997 NALP13 126204 19 61116255 NM_176810 NP_789780 C/T Q247R plus 24689078 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.25 123 "by doubleHit,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 13" 4686 rs303997 NALP13 126204 19 61116255 NM_176810 NP_789780 C/T Q247R plus 24689078 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.35 123 "by doubleHit,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 13" 4687 rs305974 CYP2F1 1572 19 46319708 NM_000774 NP_000765 A/G D218N plus 1609735 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.33 113 "HapMap,freq" 19q13.2 "cytochrome P450, family 2, subfamily F, polypeptide 1" 4688 rs305974 CYP2F1 1572 19 46319708 NM_000774 NP_000765 A/G D218N plus 1609735 1303 SEQUENOM CEPH CEPH (92) 92 0.47 113 "HapMap,freq" 19q13.2 "cytochrome P450, family 2, subfamily F, polypeptide 1" 4689 rs306197 MIDORI 57538 15 83202263 NM_020778 NP_065829 A/G P1299L minus 518586 1303 SEQUENOM CEPH CEPH (92) 92 0.32 121 by freq 15q25.2 likely ortholog of mouse myocytic induction/differentiation originator 4690 rs306506 NALP8 126205 19 61151426 NM_176811 NP_789781 C/G V116L minus 24584584 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.4 123 "by doubleHit,submitter,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 8" 4691 rs306506 NALP8 126205 19 61151426 NM_176811 NP_789781 C/G V116L minus 24584584 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.22 123 "by doubleHit,submitter,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 8" 4692 rs306506 NALP8 126205 19 61151426 NM_176811 NP_789781 C/G V116L minus 24584584 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.23 123 "by doubleHit,submitter,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 8" 4693 rs306507 NALP8 126205 19 61151154 NM_176811 NP_789781 C/T P25L plus 24584571 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.4 123 "by doubleHit,submitter,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 8" 4694 rs306507 NALP8 126205 19 61151154 NM_176811 NP_789781 C/T P25L plus 24584571 1372 PERLEGEN AFD_AFR_PANEL African American (24) 44 0.23 123 "by doubleHit,submitter,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 8" 4695 rs306507 NALP8 126205 19 61151154 NM_176811 NP_789781 C/T P25L plus 24584571 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.23 123 "by doubleHit,submitter,freq,cluster" 19q13.43 "NACHT, leucine rich repeat and PYD containing 8" 4696 rs306547 DDX31 64794 9 132499968 NM_022779 NP_073616 C/T I799V plus 504735 1303 SEQUENOM CEPH CEPH (92) 92 0.41 121 "by cluster,freq" 9q34.3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 4697 rs306548 DDX31 64794 9 132499835 NM_022779 NP_073616 C/T R843Q plus 495847 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 116 "HapMap,doubleHit,cluster" 9q34.3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 4698 rs307658 UBAP2 55833 9 33931759 NM_018449 NP_060919 A/G N606S minus 773675 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.39 121 "HapMap,doubleHit,submitter,freq,cluster" 9p13.2 ubiquitin associated protein 2 4699 rs307658 UBAP2 55833 9 33931759 NM_018449 NP_060919 A/G N606S minus 773675 1303 SEQUENOM CEPH CEPH (92) 92 0.33 121 "HapMap,doubleHit,submitter,freq,cluster" 9p13.2 ubiquitin associated protein 2 4700 rs307658 UBAP2 55833 9 33931759 NM_018449 NP_060919 A/G N606S minus 3213942 738 YUSUKE JBIC-ALLELE Japanese (752) 1468 0.26 121 "HapMap,doubleHit,submitter,freq,cluster" 9p13.2 ubiquitin associated protein 2 4701 rs307658 UBAP2 55833 9 33931759 NM_020867 NP_065918 A/G N553S minus 773675 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.39 121 "HapMap,doubleHit,submitter,freq,cluster" 9p13.2 ubiquitin associated protein 2 4702 rs307658 UBAP2 55833 9 33931759 NM_020867 NP_065918 A/G N553S minus 773675 1303 SEQUENOM CEPH CEPH (92) 92 0.33 121 "HapMap,doubleHit,submitter,freq,cluster" 9p13.2 ubiquitin associated protein 2 4703 rs307658 UBAP2 55833 9 33931759 NM_020867 NP_065918 A/G N553S minus 3213942 738 YUSUKE JBIC-ALLELE Japanese (752) 1468 0.26 121 "HapMap,doubleHit,submitter,freq,cluster" 9p13.2 ubiquitin associated protein 2 4704 rs307692 UBAP2 55833 9 33917899 NM_018449 NP_060919 C/T A756V minus 1347252 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 121 "HapMap,doubleHit,cluster" 9p13.2 ubiquitin associated protein 2 4705 rs307692 UBAP2 55833 9 33917899 NM_020867 NP_065918 C/T A703V minus 1347252 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 121 "HapMap,doubleHit,cluster" 9p13.2 ubiquitin associated protein 2 4706 rs307821 FLT4 2324 5 179962919 NM_182925 NP_891555 G/T R1324L minus 1765465 1303 SEQUENOM CEPH CEPH (92) 92 0.12 100 by freq 5q34-q35 fms-related tyrosine kinase 4 4707 rs307826 FLT4 2324 5 179983609 NM_002020 NP_002011 A/G T494A minus 3019085 1303 SEQUENOM CEPH CEPH (92) 92 0.15 96 by freq 5q34-q35 fms-related tyrosine kinase 4 4708 rs307826 FLT4 2324 5 179983609 NM_182925 NP_891555 A/G T494A minus 3019085 1303 SEQUENOM CEPH CEPH (92) 92 0.15 96 by freq 5q34-q35 fms-related tyrosine kinase 4 4709 rs309559 CSPG2 1462 5 82869125 NM_004385 NP_004376 C/T K1516R minus 731523 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.38 123 "by doubleHit,submitter,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 4710 rs309559 CSPG2 1462 5 82869125 NM_004385 NP_004376 C/T K1516R minus 731523 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 22 0.45 123 "by doubleHit,submitter,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 4711 rs309559 CSPG2 1462 5 82869125 NM_004385 NP_004376 C/T K1516R minus 731523 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.43 123 "by doubleHit,submitter,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 4712 rs309559 CSPG2 1462 5 82869125 NM_004385 NP_004376 C/T K1516R minus 731523 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 92 0.48 123 "by doubleHit,submitter,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 4713 rs309559 CSPG2 1462 5 82869125 NM_004385 NP_004376 C/T K1516R minus 2225096 1303 SEQUENOM CEPH CEPH (92) 92 0.48 123 "by doubleHit,submitter,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 4714 rs309559 CSPG2 1462 5 82869125 NM_004385 NP_004376 C/T K1516R minus 4920008 738 YUSUKE JBIC-ALLELE Japanese (752) 740 0.46 123 "by doubleHit,submitter,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 4715 rs309559 CSPG2 1462 5 82869125 NM_004385 NP_004376 C/T K1516R minus 24621156 1371 PERLEGEN AFD_EUR_PANEL European American (24) 44 0.45 123 "by doubleHit,submitter,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 4716 rs309559 CSPG2 1462 5 82869125 NM_004385 NP_004376 C/T K1516R minus 24621156 1372 PERLEGEN AFD_AFR_PANEL African American (24) 40 0.45 123 "by doubleHit,submitter,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 4717 rs309559 CSPG2 1462 5 82869125 NM_004385 NP_004376 C/T K1516R minus 24621156 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.26 123 "by doubleHit,submitter,freq,cluster" 5q14.3 chondroitin sulfate proteoglycan 2 (versican) 4718 rs310632 PRIC285 85441 20 61667251 NM_033405 NP_208384 A/G H554R minus 8378779 1303 SEQUENOM CEPH CEPH (92) 92 0.18 121 "by cluster,freq" 20q13.33 peroxisomal proliferator-activated receptor A interacting complex 285 4719 rs310657 SRMS 6725 20 61644005 NM_080823 NP_543013 C/G V301L plus 566931 1303 SEQUENOM CEPH CEPH (92) 92 1 120 "by doubleHit,cluster" 20q13.33 src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites 4720 rs310791 E2F7 144455 12 75952258 NM_203394 NP_976328 A/G F72L plus 492242 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.07 123 "HapMap,doubleHit,submitter,freq,cluster" 12q21.1 E2F transcription factor 7 4721 rs310791 E2F7 144455 12 75952258 NM_203394 NP_976328 A/G F72L plus 23379876 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.1 123 "HapMap,doubleHit,submitter,freq,cluster" 12q21.1 E2F transcription factor 7 4722 rs310791 E2F7 144455 12 75952258 NM_203394 NP_976328 A/G F72L plus 23379876 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.35 123 "HapMap,doubleHit,submitter,freq,cluster" 12q21.1 E2F transcription factor 7 4723 rs310791 E2F7 144455 12 75952258 NM_203394 NP_976328 A/G F72L plus 23379876 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.02 123 "HapMap,doubleHit,submitter,freq,cluster" 12q21.1 E2F transcription factor 7 4724 rs310831 E2F7 144455 12 75921809 NM_203394 NP_976328 A/T H854Q plus 502756 901 AFFY AfAm 10 1 123 "by doubleHit,submitter,freq" 12q21.1 E2F transcription factor 7 4725 rs310831 E2F7 144455 12 75921809 NM_203394 NP_976328 A/T H854Q plus 502756 902 AFFY Caucasian 20 0.15 123 "by doubleHit,submitter,freq" 12q21.1 E2F transcription factor 7 4726 rs310831 E2F7 144455 12 75921809 NM_203394 NP_976328 A/T H854Q plus 502756 903 AFFY Asian 12 1 123 "by doubleHit,submitter,freq" 12q21.1 E2F transcription factor 7 4727 rs310831 E2F7 144455 12 75921809 NM_203394 NP_976328 A/T H854Q plus 502756 904 AFFY CEPH 12 0.08 123 "by doubleHit,submitter,freq" 12q21.1 E2F transcription factor 7 4728 rs310831 E2F7 144455 12 75921809 NM_203394 NP_976328 A/T H854Q plus 502756 905 AFFY PDpanel 46 0.02 123 "by doubleHit,submitter,freq" 12q21.1 E2F transcription factor 7 4729 rs310831 E2F7 144455 12 75921809 NM_203394 NP_976328 A/T H854Q plus 24403096 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.15 123 "by doubleHit,submitter,freq" 12q21.1 E2F transcription factor 7 4730 rs310831 E2F7 144455 12 75921809 NM_203394 NP_976328 A/T H854Q plus 24403096 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 1 123 "by doubleHit,submitter,freq" 12q21.1 E2F transcription factor 7 4731 rs310831 E2F7 144455 12 75921809 NM_203394 NP_976328 A/T H854Q plus 24403096 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by doubleHit,submitter,freq" 12q21.1 E2F transcription factor 7 4732 rs311685 DDX43 55510 6 74182609 NM_018665 NP_061135 C/T Q629R minus 5253350 1303 SEQUENOM CEPH CEPH (92) 92 0.3 123 "by doubleHit,freq,cluster" 6q12-q13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 4733 rs311685 DDX43 55510 6 74182609 NM_018665 NP_061135 C/T Q629R minus 16335927 901 AFFY AfAm 12 0.33 123 "by doubleHit,freq,cluster" 6q12-q13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 4734 rs311685 DDX43 55510 6 74182609 NM_018665 NP_061135 C/T Q629R minus 16335927 902 AFFY Caucasian 22 0.41 123 "by doubleHit,freq,cluster" 6q12-q13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 4735 rs311685 DDX43 55510 6 74182609 NM_018665 NP_061135 C/T Q629R minus 16335927 903 AFFY Asian 12 0.33 123 "by doubleHit,freq,cluster" 6q12-q13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 4736 rs311685 DDX43 55510 6 74182609 NM_018665 NP_061135 C/T Q629R minus 16335927 904 AFFY CEPH 5 0.5 123 "by doubleHit,freq,cluster" 6q12-q13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 4737 rs311685 DDX43 55510 6 74182609 NM_018665 NP_061135 C/T Q629R minus 16335927 905 AFFY PDpanel 48 0.33 123 "by doubleHit,freq,cluster" 6q12-q13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 4738 rs311685 DDX43 55510 6 74182609 NM_018665 NP_061135 C/T Q629R minus 24402124 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.44 123 "by doubleHit,freq,cluster" 6q12-q13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 4739 rs311685 DDX43 55510 6 74182609 NM_018665 NP_061135 C/T Q629R minus 24402124 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.33 123 "by doubleHit,freq,cluster" 6q12-q13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 4740 rs311685 DDX43 55510 6 74182609 NM_018665 NP_061135 C/T Q629R minus 24402124 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.38 123 "by doubleHit,freq,cluster" 6q12-q13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 4741 rs311686 DDX43 55510 6 74182596 NM_018665 NP_061135 C/T K625E minus 5384030 1303 SEQUENOM CEPH CEPH (92) 92 0.46 123 "by doubleHit,freq,cluster" 6q12-q13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 4742 rs311686 DDX43 55510 6 74182596 NM_018665 NP_061135 C/T K625E minus 24402117 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.44 123 "by doubleHit,freq,cluster" 6q12-q13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 4743 rs311686 DDX43 55510 6 74182596 NM_018665 NP_061135 C/T K625E minus 24402117 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.33 123 "by doubleHit,freq,cluster" 6q12-q13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 4744 rs311686 DDX43 55510 6 74182596 NM_018665 NP_061135 C/T K625E minus 24402117 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.38 123 "by doubleHit,freq,cluster" 6q12-q13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 4745 rs315675 ZCCHC4 29063 4 25040170 XM_376310 XP_376310 A/T L395H minus 899412 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.25 121 "HapMap,submitter,freq,cluster" 4p15.31 "zinc finger, CCHC domain containing 4" 4746 rs315675 ZCCHC4 29063 4 25040170 XM_376310 XP_376310 A/T L395H minus 899412 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 1 121 "HapMap,submitter,freq,cluster" 4p15.31 "zinc finger, CCHC domain containing 4" 4747 rs315675 ZCCHC4 29063 4 25040170 XM_376310 XP_376310 A/T L395H minus 899412 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.21 121 "HapMap,submitter,freq,cluster" 4p15.31 "zinc finger, CCHC domain containing 4" 4748 rs315675 ZCCHC4 29063 4 25040170 XM_376310 XP_376310 A/T L395H minus 899412 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 92 0.09 121 "HapMap,submitter,freq,cluster" 4p15.31 "zinc finger, CCHC domain containing 4" 4749 rs315675 ZCCHC4 29063 4 25040170 XM_376310 XP_376310 A/T L395H minus 2754883 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.15 121 "HapMap,submitter,freq,cluster" 4p15.31 "zinc finger, CCHC domain containing 4" 4750 rs315675 ZCCHC4 29063 4 25040170 XM_376310 XP_376310 A/T L395H minus 2754883 1303 SEQUENOM CEPH CEPH (92) 92 0.18 121 "HapMap,submitter,freq,cluster" 4p15.31 "zinc finger, CCHC domain containing 4" 4751 rs315675 ZCCHC4 29063 4 25040170 XM_376310 XP_376310 A/T L395H minus 4938901 738 YUSUKE JBIC-ALLELE Japanese (752) 718 0.15 121 "HapMap,submitter,freq,cluster" 4p15.31 "zinc finger, CCHC domain containing 4" 4752 rs316019 SLC22A2 6582 6 160640693 NM_003058 NP_003049 G/T S270A minus 839507 1303 SEQUENOM CEPH CEPH (92) 92 0.22 123 "by doubleHit,submitter,freq,cluster" 6q26 "solute carrier family 22 (organic cation transporter), member 2" 4753 rs316019 SLC22A2 6582 6 160640693 NM_003058 NP_003049 G/T S270A minus 3217102 738 YUSUKE JBIC-ALLELE Japanese (752) 1498 0.12 123 "by doubleHit,submitter,freq,cluster" 6q26 "solute carrier family 22 (organic cation transporter), member 2" 4754 rs316019 SLC22A2 6582 6 160640693 NM_003058 NP_003049 G/T S270A minus 8820718 869 PHARMGKB_PMT PA128164248 488 0.13 123 "by doubleHit,submitter,freq,cluster" 6q26 "solute carrier family 22 (organic cation transporter), member 2" 4755 rs316019 SLC22A2 6582 6 160640693 NM_003058 NP_003049 G/T S270A minus 24018007 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.06 123 "by doubleHit,submitter,freq,cluster" 6q26 "solute carrier family 22 (organic cation transporter), member 2" 4756 rs316019 SLC22A2 6582 6 160640693 NM_003058 NP_003049 G/T S270A minus 24018007 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "by doubleHit,submitter,freq,cluster" 6q26 "solute carrier family 22 (organic cation transporter), member 2" 4757 rs316019 SLC22A2 6582 6 160640693 NM_003058 NP_003049 G/T S270A minus 24018007 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.21 123 "by doubleHit,submitter,freq,cluster" 6q26 "solute carrier family 22 (organic cation transporter), member 2" 4758 rs316019 SLC22A2 6582 6 160640693 NM_153191 NP_694861 G/T S270A minus 839507 1303 SEQUENOM CEPH CEPH (92) 92 0.22 123 "by doubleHit,submitter,freq,cluster" 6q26 "solute carrier family 22 (organic cation transporter), member 2" 4759 rs316019 SLC22A2 6582 6 160640693 NM_153191 NP_694861 G/T S270A minus 3217102 738 YUSUKE JBIC-ALLELE Japanese (752) 1498 0.12 123 "by doubleHit,submitter,freq,cluster" 6q26 "solute carrier family 22 (organic cation transporter), member 2" 4760 rs316019 SLC22A2 6582 6 160640693 NM_153191 NP_694861 G/T S270A minus 8820718 869 PHARMGKB_PMT PA128164248 488 0.13 123 "by doubleHit,submitter,freq,cluster" 6q26 "solute carrier family 22 (organic cation transporter), member 2" 4761 rs316019 SLC22A2 6582 6 160640693 NM_153191 NP_694861 G/T S270A minus 24018007 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.06 123 "by doubleHit,submitter,freq,cluster" 6q26 "solute carrier family 22 (organic cation transporter), member 2" 4762 rs316019 SLC22A2 6582 6 160640693 NM_153191 NP_694861 G/T S270A minus 24018007 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.13 123 "by doubleHit,submitter,freq,cluster" 6q26 "solute carrier family 22 (organic cation transporter), member 2" 4763 rs316019 SLC22A2 6582 6 160640693 NM_153191 NP_694861 G/T S270A minus 24018007 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.21 123 "by doubleHit,submitter,freq,cluster" 6q26 "solute carrier family 22 (organic cation transporter), member 2" 4764 rs318687 TM4-B 26526 19 11298480 NM_012466 NP_036598 C/G S233C minus 515742 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.04 116 "by doubleHit,freq,cluster" 19p13.2 tetraspanin TM4-B 4765 rs318687 TM4-B 26526 19 11298480 NM_012466 NP_036598 C/G S233C minus 515742 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.29 116 "by doubleHit,freq,cluster" 19p13.2 tetraspanin TM4-B 4766 rs318687 TM4-B 26526 19 11298480 NM_012466 NP_036598 C/G S233C minus 515742 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 1 116 "by doubleHit,freq,cluster" 19p13.2 tetraspanin TM4-B 4767 rs321937 ZNF610 162963 19 57561090 NM_173530 NP_775801 C/G R216P minus 4058648 901 AFFY AfAm 10 0.2 121 "by doubleHit,submitter,freq,cluster" 19q13.41 zinc finger protein 610 4768 rs321937 ZNF610 162963 19 57561090 NM_173530 NP_775801 C/G R216P minus 4058648 902 AFFY Caucasian 20 0.1 121 "by doubleHit,submitter,freq,cluster" 19q13.41 zinc finger protein 610 4769 rs321937 ZNF610 162963 19 57561090 NM_173530 NP_775801 C/G R216P minus 4058648 903 AFFY Asian 12 0.33 121 "by doubleHit,submitter,freq,cluster" 19q13.41 zinc finger protein 610 4770 rs321937 ZNF610 162963 19 57561090 NM_173530 NP_775801 C/G R216P minus 4058648 904 AFFY CEPH 12 0.17 121 "by doubleHit,submitter,freq,cluster" 19q13.41 zinc finger protein 610 4771 rs321937 ZNF610 162963 19 57561090 NM_173530 NP_775801 C/G R216P minus 4058648 905 AFFY PDpanel 44 0.27 121 "by doubleHit,submitter,freq,cluster" 19q13.41 zinc finger protein 610 4772 rs323344 TEX15 56154 8 30822067 NM_031271 NP_112561 A/C L1337V plus 3406216 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.12 120 "HapMap,doubleHit,submitter,freq,cluster" 8p12 testis expressed sequence 15 4773 rs323344 TEX15 56154 8 30822067 NM_031271 NP_112561 A/C L1337V plus 3406216 901 AFFY AfAm 10 0.3 120 "HapMap,doubleHit,submitter,freq,cluster" 8p12 testis expressed sequence 15 4774 rs323344 TEX15 56154 8 30822067 NM_031271 NP_112561 A/C L1337V plus 3406216 902 AFFY Caucasian 24 1 120 "HapMap,doubleHit,submitter,freq,cluster" 8p12 testis expressed sequence 15 4775 rs323344 TEX15 56154 8 30822067 NM_031271 NP_112561 A/C L1337V plus 3406216 903 AFFY Asian 12 0.17 120 "HapMap,doubleHit,submitter,freq,cluster" 8p12 testis expressed sequence 15 4776 rs323344 TEX15 56154 8 30822067 NM_031271 NP_112561 A/C L1337V plus 3406216 904 AFFY CEPH 10 1 120 "HapMap,doubleHit,submitter,freq,cluster" 8p12 testis expressed sequence 15 4777 rs323344 TEX15 56154 8 30822067 NM_031271 NP_112561 A/C L1337V plus 3406216 905 AFFY PDpanel 46 0.24 120 "HapMap,doubleHit,submitter,freq,cluster" 8p12 testis expressed sequence 15 4778 rs323344 TEX15 56154 8 30822067 NM_031271 NP_112561 A/C L1337V plus 3406216 1303 SEQUENOM CEPH CEPH (92) 92 0.11 120 "HapMap,doubleHit,submitter,freq,cluster" 8p12 testis expressed sequence 15 4779 rs323345 TEX15 56154 8 30822144 NM_031271 NP_112561 C/T N1311S plus 3457526 1303 SEQUENOM CEPH CEPH (92) 92 0.07 120 "by doubleHit,submitter,freq,cluster" 8p12 testis expressed sequence 15 4780 rs323346 TEX15 56154 8 30822973 NM_031271 NP_112561 C/T I1035V plus 413517 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.13 119 "by doubleHit,freq,cluster" 8p12 testis expressed sequence 15 4781 rs323346 TEX15 56154 8 30822973 NM_031271 NP_112561 C/T I1035V plus 413517 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.38 119 "by doubleHit,freq,cluster" 8p12 testis expressed sequence 15 4782 rs323346 TEX15 56154 8 30822973 NM_031271 NP_112561 C/T I1035V plus 413517 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 24 0.08 119 "by doubleHit,freq,cluster" 8p12 testis expressed sequence 15 4783 rs323346 TEX15 56154 8 30822973 NM_031271 NP_112561 C/T I1035V plus 413517 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 90 0.18 119 "by doubleHit,freq,cluster" 8p12 testis expressed sequence 15 4784 rs323346 TEX15 56154 8 30822973 NM_031271 NP_112561 C/T I1035V plus 3457525 1303 SEQUENOM CEPH CEPH (92) 92 0.15 119 "by doubleHit,freq,cluster" 8p12 testis expressed sequence 15 4785 rs323347 TEX15 56154 8 30825766 NM_031271 NP_112561 A/G C104R plus 3406215 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.18 120 "HapMap,doubleHit,freq,cluster" 8p12 testis expressed sequence 15 4786 rs323347 TEX15 56154 8 30825766 NM_031271 NP_112561 A/G C104R plus 3406215 1303 SEQUENOM CEPH CEPH (92) 92 0.21 120 "HapMap,doubleHit,freq,cluster" 8p12 testis expressed sequence 15 4787 rs323562 CARD6 84674 5 40888917 NM_032587 NP_115976 C/T I576V minus 2148215 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 88 HapMap 5p13.1 "caspase recruitment domain family, member 6" 4788 rs323562 CARD6 84674 5 40888917 NM_032587 NP_115976 C/T I576V minus 2148215 1303 SEQUENOM CEPH CEPH (92) 92 1 88 HapMap 5p13.1 "caspase recruitment domain family, member 6" 4789 rs323844 MKLN1 4289 7 130587797 NM_013255 NP_037387 A/C C469G minus 493667 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 86 HapMap 7q32 "muskelin 1, intracellular mediator containing kelch motifs" 4790 rs323844 MKLN1 4289 7 130587797 NM_013255 NP_037387 A/C C469G minus 493667 1303 SEQUENOM CEPH CEPH (92) 92 1 86 HapMap 7q32 "muskelin 1, intracellular mediator containing kelch motifs" 4791 rs323844 MKLN1 4289 7 130587797 NM_013255 NP_037387 A/C C469G minus 1154544 638 TSC-CSHL TSC_42_AA TSC African American (42) 84 1 86 HapMap 7q32 "muskelin 1, intracellular mediator containing kelch motifs" 4792 rs323844 MKLN1 4289 7 130587797 NM_013255 NP_037387 A/C C469G minus 1154544 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 83 0.06 86 HapMap 7q32 "muskelin 1, intracellular mediator containing kelch motifs" 4793 rs323844 MKLN1 4289 7 130587797 NM_013255 NP_037387 A/C C469G minus 1154544 640 TSC-CSHL TSC_42_A TSC Asian (42) 84 1 86 HapMap 7q32 "muskelin 1, intracellular mediator containing kelch motifs" 4794 rs323870 ADPRTL3 10039 3 51954225 NM_005485 NP_005476 A/G Q269R plus 491764 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 1 121 "by cluster,freq" 3p22.2-p21.1 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 3 4795 rs323870 ADPRTL3 10039 3 51954225 NM_005485 NP_005476 A/G Q269R plus 491764 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.08 121 "by cluster,freq" 3p22.2-p21.1 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 3 4796 rs323870 ADPRTL3 10039 3 51954225 NM_005485 NP_005476 A/G Q269R plus 491764 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 1 121 "by cluster,freq" 3p22.2-p21.1 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 3 4797 rs323870 ADPRTL3 10039 3 51954225 NM_005485 NP_005476 A/G Q269R plus 1338935 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "by cluster,freq" 3p22.2-p21.1 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 3 4798 rs323870 ADPRTL3 10039 3 51954225 NM_005485 NP_005476 A/G Q269R plus 5586220 754 SNP500CANCER P1 "African / African-Americans (24), Caucasians (31), Hispanics (23), Pacific Rim (24)" 204 0.04 121 "by cluster,freq" 3p22.2-p21.1 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 3 4799 rs323870 ADPRTL3 10039 3 51954225 NM_005485 NP_005476 A/G Q269R plus 5586220 775 SNP500CANCER CAUC1 Caucasian (31) 62 1 121 "by cluster,freq" 3p22.2-p21.1 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 3 4800 rs323870 ADPRTL3 10039 3 51954225 NM_005485 NP_005476 A/G Q269R plus 5586220 776 SNP500CANCER AFR1 African / African-American (24) 48 0.15 121 "by cluster,freq" 3p22.2-p21.1 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 3 4801 rs323870 ADPRTL3 10039 3 51954225 NM_005485 NP_005476 A/G Q269R plus 5586220 777 SNP500CANCER HISP1 Hispanic (23) 46 0.04 121 "by cluster,freq" 3p22.2-p21.1 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 3 4802 rs323870 ADPRTL3 10039 3 51954225 NM_005485 NP_005476 A/G Q269R plus 5586220 778 SNP500CANCER PAC1 Pacific Rim (24) 48 1 121 "by cluster,freq" 3p22.2-p21.1 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 3 4803 rs324136 AARSL 57505 6 44382989 NM_020745 NP_065796 A/G I339V minus 848292 1303 SEQUENOM CEPH CEPH (92) 92 0.01 123 "by doubleHit,freq,cluster" 6p21.1 alanyl-tRNA synthetase like 4804 rs324136 AARSL 57505 6 44382989 NM_020745 NP_065796 A/G I339V minus 23675611 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "by doubleHit,freq,cluster" 6p21.1 alanyl-tRNA synthetase like 4805 rs324136 AARSL 57505 6 44382989 NM_020745 NP_065796 A/G I339V minus 23675611 1372 PERLEGEN AFD_AFR_PANEL African American (24) 40 0.2 123 "by doubleHit,freq,cluster" 6p21.1 alanyl-tRNA synthetase like 4806 rs324136 AARSL 57505 6 44382989 NM_020745 NP_065796 A/G I339V minus 23675611 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 46 0.02 123 "by doubleHit,freq,cluster" 6p21.1 alanyl-tRNA synthetase like 4807 rs324420 FAAH 2166 1 46582781 NM_001441 NP_001432 A/C P129T plus 587534 771 TSC-CSHL SC_12_A CORIELL Asian (12) 16 0.06 121 "HapMap,doubleHit,submitter,freq,cluster" 1p35-p34 fatty acid amide hydrolase 4808 rs324420 FAAH 2166 1 46582781 NM_001441 NP_001432 A/C P129T plus 587534 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 16 0.31 121 "HapMap,doubleHit,submitter,freq,cluster" 1p35-p34 fatty acid amide hydrolase 4809 rs324420 FAAH 2166 1 46582781 NM_001441 NP_001432 A/C P129T plus 587534 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 12 0.42 121 "HapMap,doubleHit,submitter,freq,cluster" 1p35-p34 fatty acid amide hydrolase 4810 rs324420 FAAH 2166 1 46582781 NM_001441 NP_001432 A/C P129T plus 587534 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.23 121 "HapMap,doubleHit,submitter,freq,cluster" 1p35-p34 fatty acid amide hydrolase 4811 rs324420 FAAH 2166 1 46582781 NM_001441 NP_001432 A/C P129T plus 587534 1303 SEQUENOM CEPH CEPH (92) 92 0.23 121 "HapMap,doubleHit,submitter,freq,cluster" 1p35-p34 fatty acid amide hydrolase 4812 rs324981 GPR154 387129 7 34591353 NM_207172 NP_997055 A/T N107I plus 2169783 901 AFFY AfAm 12 0.33 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4813 rs324981 GPR154 387129 7 34591353 NM_207172 NP_997055 A/T N107I plus 2169783 902 AFFY Caucasian 22 0.45 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4814 rs324981 GPR154 387129 7 34591353 NM_207172 NP_997055 A/T N107I plus 2169783 903 AFFY Asian 10 0.4 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4815 rs324981 GPR154 387129 7 34591353 NM_207172 NP_997055 A/T N107I plus 2169783 904 AFFY CEPH 8 0.25 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4816 rs324981 GPR154 387129 7 34591353 NM_207172 NP_997055 A/T N107I plus 2169783 905 AFFY PDpanel 42 0.38 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4817 rs324981 GPR154 387129 7 34591353 NM_207172 NP_997055 A/T N107I plus 23197573 1371 PERLEGEN AFD_EUR_PANEL European American (24) 24 0.5 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4818 rs324981 GPR154 387129 7 34591353 NM_207172 NP_997055 A/T N107I plus 23197573 1372 PERLEGEN AFD_AFR_PANEL African American (24) 23 0.5 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4819 rs324981 GPR154 387129 7 34591353 NM_207172 NP_997055 A/T N107I plus 23197573 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4820 rs324981 GPR154 387129 7 34591353 NM_207173 NP_997056 A/T N107I plus 2169783 901 AFFY AfAm 12 0.33 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4821 rs324981 GPR154 387129 7 34591353 NM_207173 NP_997056 A/T N107I plus 2169783 902 AFFY Caucasian 22 0.45 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4822 rs324981 GPR154 387129 7 34591353 NM_207173 NP_997056 A/T N107I plus 2169783 903 AFFY Asian 10 0.4 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4823 rs324981 GPR154 387129 7 34591353 NM_207173 NP_997056 A/T N107I plus 2169783 904 AFFY CEPH 8 0.25 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4824 rs324981 GPR154 387129 7 34591353 NM_207173 NP_997056 A/T N107I plus 2169783 905 AFFY PDpanel 42 0.38 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4825 rs324981 GPR154 387129 7 34591353 NM_207173 NP_997056 A/T N107I plus 23197573 1371 PERLEGEN AFD_EUR_PANEL European American (24) 24 0.5 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4826 rs324981 GPR154 387129 7 34591353 NM_207173 NP_997056 A/T N107I plus 23197573 1372 PERLEGEN AFD_AFR_PANEL African American (24) 23 0.5 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4827 rs324981 GPR154 387129 7 34591353 NM_207173 NP_997056 A/T N107I plus 23197573 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.35 123 "by doubleHit,freq,cluster" 7p14.3 G protein-coupled receptor 154 4828 rs325609 OR52W1 120787 11 6177825 XM_062263 XP_062263 A/G T266A plus 23529893 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.04 123 "by cluster,freq" 11p15.4 "olfactory receptor, family 52, subfamily W, member 1" 4829 rs325609 OR52W1 120787 11 6177825 XM_062263 XP_062263 A/G T266A plus 23529893 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.04 123 "by cluster,freq" 11p15.4 "olfactory receptor, family 52, subfamily W, member 1" 4830 rs325609 OR52W1 120787 11 6177825 XM_062263 XP_062263 A/G T266A plus 23529893 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 1 123 "by cluster,freq" 11p15.4 "olfactory receptor, family 52, subfamily W, member 1" 4831 rs325706 CNGA4 1262 11 6222145 XM_290552 XP_290552 A/T E553V minus 600789 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 87 HapMap 11p15.4 cyclic nucleotide gated channel alpha 4 4832 rs329003 PPP4R1 9989 18 9560320 NM_005134 NP_005125 A/G I453V minus 510318 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.08 87 "HapMap,submitter,freq" 18p11.22 "protein phosphatase 4, regulatory subunit 1" 4833 rs329003 PPP4R1 9989 18 9560320 NM_005134 NP_005125 A/G I453V minus 510318 1303 SEQUENOM CEPH CEPH (92) 92 0.06 87 "HapMap,submitter,freq" 18p11.22 "protein phosphatase 4, regulatory subunit 1" 4834 rs330150 DNAH3 55567 16 20958710 NM_017539 NP_060009 C/G I1565M plus 1963772 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.1 123 "HapMap,submitter,freq,cluster" 16p13.11-p12.3 "dynein, axonemal, heavy polypeptide 3" 4835 rs330150 DNAH3 55567 16 20958710 NM_017539 NP_060009 C/G I1565M plus 23364974 1371 PERLEGEN AFD_EUR_PANEL European American (24) 36 0.11 123 "HapMap,submitter,freq,cluster" 16p13.11-p12.3 "dynein, axonemal, heavy polypeptide 3" 4836 rs330150 DNAH3 55567 16 20958710 NM_017539 NP_060009 C/G I1565M plus 23364974 1372 PERLEGEN AFD_AFR_PANEL African American (24) 34 0.24 123 "HapMap,submitter,freq,cluster" 16p13.11-p12.3 "dynein, axonemal, heavy polypeptide 3" 4837 rs330150 DNAH3 55567 16 20958710 NM_017539 NP_060009 C/G I1565M plus 23364974 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 44 0.23 123 "HapMap,submitter,freq,cluster" 16p13.11-p12.3 "dynein, axonemal, heavy polypeptide 3" 4838 rs330877 EMR1 2015 19 6847483 NM_001974 NP_001965 A/G A57T plus 604855 771 TSC-CSHL SC_12_A CORIELL Asian (12) 18 0.39 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 1" 4839 rs330877 EMR1 2015 19 6847483 NM_001974 NP_001965 A/G A57T plus 604855 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.42 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 1" 4840 rs330877 EMR1 2015 19 6847483 NM_001974 NP_001965 A/G A57T plus 604855 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 7 0.5 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 1" 4841 rs330877 EMR1 2015 19 6847483 NM_001974 NP_001965 A/G A57T plus 604855 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.23 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 1" 4842 rs330877 EMR1 2015 19 6847483 NM_001974 NP_001965 A/G A57T plus 604855 1303 SEQUENOM CEPH CEPH (92) 92 0.43 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 1" 4843 rs330877 EMR1 2015 19 6847483 NM_001974 NP_001965 A/G A57T plus 3173228 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 46 0.26 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 1" 4844 rs330877 EMR1 2015 19 6847483 NM_001974 NP_001965 A/G A57T plus 23558404 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.27 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 1" 4845 rs330877 EMR1 2015 19 6847483 NM_001974 NP_001965 A/G A57T plus 23558404 1372 PERLEGEN AFD_AFR_PANEL African American (24) 22 0.5 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 1" 4846 rs330877 EMR1 2015 19 6847483 NM_001974 NP_001965 A/G A57T plus 23558404 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.44 123 "HapMap,doubleHit,submitter,freq,cluster" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 1" 4847 rs330880 EMR1 2015 19 6848464 NM_001974 NP_001965 C/G S140R plus 3173229 615 WIAF-CSNP WIAF-CSNP-MITOGPOP5 CORIELL Mixed 40 0.48 121 "by doubleHit,freq,cluster" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 1" 4848 rs330880 EMR1 2015 19 6848464 NM_001974 NP_001965 C/G S140R plus 14712278 1303 SEQUENOM CEPH CEPH (92) 92 0.37 121 "by doubleHit,freq,cluster" 19p13.3 "egf-like module containing, mucin-like, hormone receptor-like 1" 4849 rs331510 OR52K1 390036 11 4467163 XM_372347 XP_372347 A/G R153W minus 2856099 638 TSC-CSHL TSC_42_AA TSC African American (42) 83 0.05 123 "by doubleHit,freq" 11p15.4 "olfactory receptor, family 52, subfamily K, member 1" 4850 rs331510 OR52K1 390036 11 4467163 XM_372347 XP_372347 A/G R153W minus 2856099 639 TSC-CSHL TSC_42_C TSC Caucasian (42) 84 0.19 123 "by doubleHit,freq" 11p15.4 "olfactory receptor, family 52, subfamily K, member 1" 4851 rs331537 OR52K2 119774 11 4427852 XM_061676 XP_061676 C/T R236H minus 2703794 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.03 116 "HapMap,doubleHit,freq,cluster" 11p15.4 "olfactory receptor, family 52, subfamily K, member 2" 4852 rs334773 TRNT1 51095 3 3145792 NM_182916 NP_886552 A/G P23L minus 10089769 1303 SEQUENOM CEPH CEPH (92) 92 1 121 "by doubleHit,cluster" 3p25.1 "tRNA nucleotidyl transferase, CCA-adding, 1" 4853 rs339445 DNAH5 1767 5 13997512 NM_001369 NP_001360 A/C H12Q plus 1804697 885 TSC-CSHL HapMap-CEPH-30-trios 118 0.08 123 "HapMap,doubleHit,freq,cluster" 5p15.2 "dynein, axonemal, heavy polypeptide 5" 4854 rs339445 DNAH5 1767 5 13997512 NM_001369 NP_001360 A/C H12Q plus 1804697 1303 SEQUENOM CEPH CEPH (92) 92 0.21 123 "HapMap,doubleHit,freq,cluster" 5p15.2 "dynein, axonemal, heavy polypeptide 5" 4855 rs339445 DNAH5 1767 5 13997512 NM_001369 NP_001360 A/C H12Q plus 23982816 1371 PERLEGEN AFD_EUR_PANEL European American (24) 48 0.08 123 "HapMap,doubleHit,freq,cluster" 5p15.2 "dynein, axonemal, heavy polypeptide 5" 4856 rs339445 DNAH5 1767 5 13997512 NM_001369 NP_001360 A/C H12Q plus 23982816 1372 PERLEGEN AFD_AFR_PANEL African American (24) 46 0.02 123 "HapMap,doubleHit,freq,cluster" 5p15.2 "dynein, axonemal, heavy polypeptide 5" 4857 rs339445 DNAH5 1767 5 13997512 NM_001369 NP_001360 A/C H12Q plus 23982816 1373 PERLEGEN AFD_CHN_PANEL Chinese (24) 48 0.23 123 "HapMap,doubleHit,freq,cluster" 5p15.2 "dynein, axonemal, heavy polypeptide 5" 4858 rs340138 GPR108 56927 19 6688481 XM_290854 XP_290854 C/T Q36R plus 3032933 1303 SEQUENOM CEPH CEPH (92) 92 0.39 121 "by doubleHit,freq,cluster" 19p13.3 G protein-coupled receptor 108 4859 rs340138 GPR108 56927 19 6688481 XM_290854 XP_290854 C/T Q36R plus 4931567 738 YUSUKE JBIC-ALLELE Japanese (752) 1468 0.01 121 "by doubleHit,freq,cluster" 19p13.3 G protein-coupled receptor 108 4860 rs340151 TMPRSS7 344805 3 113282535 XM_293599 XP_293599 A/T S704C plus 2013558 1303 SEQUENOM CEPH CEPH (92) 92 0.19 121 "by cluster,freq" 3q13.2 transmembrane serine protease 7 4861 rs343320 PLSCR1 5359 3 147717607 NM_021105 NP_066928 C/T H262Y minus 2256969 1303 SEQUENOM CEPH CEPH (92) 92 0.21 88 by freq 3q23 phospholipid scramblase 1 4862 rs344140 ShrmL 57619 4 78017341 NM_020859 NP_065910 C/G G278A plus 569841 1303 SEQUENOM CEPH CEPH (92) 92 0.17 120 "by doubleHit,freq,cluster" 4q21.22 Shroom-related protein 4863 rs344141 ShrmL 57619 4 78017910 NM_020859 NP_065910 C/G P468A plus 1335241 1303 SEQUENOM CEPH CEPH (92) 92 0.39 120 "by doubleHit,freq,cluster" 4q21.22 Shroom-related protein 4864 rs344560 TNFSF14 8740 19 6616020 NM_003807 NP_003798 A/G K214E minus 507966 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.17 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4865 rs344560 TNFSF14 8740 19 6616020 NM_003807 NP_003798 A/G K214E minus 507966 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.08 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4866 rs344560 TNFSF14 8740 19 6616020 NM_003807 NP_003798 A/G K214E minus 507966 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.07 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4867 rs344560 TNFSF14 8740 19 6616020 NM_003807 NP_003798 A/G K214E minus 507966 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.06 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4868 rs344560 TNFSF14 8740 19 6616020 NM_003807 NP_003798 A/G K214E minus 882762 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.17 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4869 rs344560 TNFSF14 8740 19 6616020 NM_003807 NP_003798 A/G K214E minus 882762 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 22 0.05 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4870 rs344560 TNFSF14 8740 19 6616020 NM_003807 NP_003798 A/G K214E minus 882762 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.07 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4871 rs344560 TNFSF14 8740 19 6616020 NM_003807 NP_003798 A/G K214E minus 882762 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.06 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4872 rs344560 TNFSF14 8740 19 6616020 NM_003807 NP_003798 A/G K214E minus 1317737 780 TSC-CSHL WICGR8_ASIAN_POOLED WICGR Asian (30) 84 0.12 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4873 rs344560 TNFSF14 8740 19 6616020 NM_003807 NP_003798 A/G K214E minus 1317737 782 TSC-CSHL WICGR6_CAUCASIAN_POOLED WICGR Caucasian (48) 96 0.02 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4874 rs344560 TNFSF14 8740 19 6616020 NM_003807 NP_003798 A/G K214E minus 1683165 1303 SEQUENOM CEPH CEPH (92) 92 0.08 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4875 rs344560 TNFSF14 8740 19 6616020 NM_003807 NP_003798 A/G K214E minus 4931579 738 YUSUKE JBIC-ALLELE Japanese (752) 1502 0.07 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4876 rs344560 TNFSF14 8740 19 6616020 NM_172014 NP_742011 A/G K178E minus 507966 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.17 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4877 rs344560 TNFSF14 8740 19 6616020 NM_172014 NP_742011 A/G K178E minus 507966 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 24 0.08 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4878 rs344560 TNFSF14 8740 19 6616020 NM_172014 NP_742011 A/G K178E minus 507966 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.07 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4879 rs344560 TNFSF14 8740 19 6616020 NM_172014 NP_742011 A/G K178E minus 507966 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.06 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4880 rs344560 TNFSF14 8740 19 6616020 NM_172014 NP_742011 A/G K178E minus 882762 771 TSC-CSHL SC_12_A CORIELL Asian (12) 24 0.17 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4881 rs344560 TNFSF14 8740 19 6616020 NM_172014 NP_742011 A/G K178E minus 882762 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 22 0.05 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4882 rs344560 TNFSF14 8740 19 6616020 NM_172014 NP_742011 A/G K178E minus 882762 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 0.07 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4883 rs344560 TNFSF14 8740 19 6616020 NM_172014 NP_742011 A/G K178E minus 882762 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.06 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4884 rs344560 TNFSF14 8740 19 6616020 NM_172014 NP_742011 A/G K178E minus 1317737 780 TSC-CSHL WICGR8_ASIAN_POOLED WICGR Asian (30) 84 0.12 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4885 rs344560 TNFSF14 8740 19 6616020 NM_172014 NP_742011 A/G K178E minus 1317737 782 TSC-CSHL WICGR6_CAUCASIAN_POOLED WICGR Caucasian (48) 96 0.02 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4886 rs344560 TNFSF14 8740 19 6616020 NM_172014 NP_742011 A/G K178E minus 1683165 1303 SEQUENOM CEPH CEPH (92) 92 0.08 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4887 rs344560 TNFSF14 8740 19 6616020 NM_172014 NP_742011 A/G K178E minus 4931579 738 YUSUKE JBIC-ALLELE Japanese (752) 1502 0.07 121 "by doubleHit,freq,cluster" 19p13.3 "tumor necrosis factor (ligand) superfamily, member 14" 4888 rs345513 FRAS1 80144 4 79597242 NM_020875 NP_065926 C/T D687G minus 2710609 1303 SEQUENOM CEPH CEPH (92) 92 0.29 92 "by doubleHit,submitter,freq" 4q21.21 Fraser syndrome 1 4889 rs345513 FRAS1 80144 4 79597242 NM_206841 NP_996672 C/T D687G minus 2710609 1303 SEQUENOM CEPH CEPH (92) 92 0.29 92 "by doubleHit,submitter,freq" 4q21.21 Fraser syndrome 1 4890 rs349028 ZNF283 284349 19 49016448 XM_371174 XP_371174 C/T P24S plus 1746388 885 TSC-CSHL HapMap-CEPH-30-trios 120 1 87 HapMap 19q13.32 zinc finger protein 283 4891 rs349028 ZNF283 284349 19 49016448 XM_371174 XP_371174 C/T P24S plus 1746388 1303 SEQUENOM CEPH CEPH (92) 92 1 87 HapMap 19q13.32 zinc finger protein 283 4892 rs351111 PRTN3 5657 19 795020 NM_002777 NP_002768 A/G V119I plus 1745256 885 TSC-CSHL HapMap-CEPH-30-trios 120 0.43 102 "HapMap,submitter,freq" 19p13.3 "proteinase 3 (serine proteinase, neutrophil, Wegener granulomatosis autoantigen)" 4893 rs351111 PRTN3 5657 19 795020 NM_002777 NP_002768 A/G V119I plus 1745256 1303 SEQUENOM CEPH CEPH (92) 92 0.44 102 "HapMap,submitter,freq" 19p13.3 "proteinase 3 (serine proteinase, neutrophil, Wegener granulomatosis autoantigen)" 4894 rs351855 FGFR4 2264 5 176452849 NM_002011 NP_002002 C/T G388R minus 1663705 1303 SEQUENOM CEPH CEPH (92) 92 0.31 120 by freq 5q35.1-qter fibroblast growth factor receptor 4 4895 rs351855 FGFR4 2264 5 176452849 NM_213647 NP_998812 C/T G388R minus 1663705 1303 SEQUENOM CEPH CEPH (92) 92 0.31 120 by freq 5q35.1-qter fibroblast growth factor receptor 4 4896 rs352493 SIRT6 51548 19 4131836 NM_016539 NP_057623 C/T S46N plus 566893 771 TSC-CSHL SC_12_A CORIELL Asian (12) 22 0.32 123 "by cluster,freq" 19p13.3 sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae) 4897 rs352493 SIRT6 51548 19 4131836 NM_016539 NP_057623 C/T S46N plus 566893 772 TSC-CSHL SC_12_AA CORIELL African-American (12) 20 0.05 123 "by cluster,freq" 19p13.3 sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae) 4898 rs352493 SIRT6 51548 19 4131836 NM_016539 NP_057623 C/T S46N plus 566893 773 TSC-CSHL SC_12_C CORIELL Caucasian (12) 14 1 123 "by cluster,freq" 19p13.3 sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae) 4899 rs352493 SIRT6 51548 19 4131836 NM_016539 NP_057623 C/T S46N plus 566893 774 TSC-CSHL SC_95_C CORIELL Caucasian (95) 94 0.05 123 "by cluster,freq" 19p13.3 sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae) 4900 rs352493 SIRT6 51548 19 4131836 NM_016539 NP_057623 C/T S46N plus 566893 1303 SEQUENOM CEPH CEPH (92) 92 0.01 123 "by cluster,freq" 19p13.3 sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae) 4901 rs352493 SIRT6 51548 19 4131836 NM_016539 NP_057623 C/T S46N plus 24081883 1371 PERLEGEN AFD_EU